HEADER LYASE 23-JAN-97 2TPL TITLE TYROSINE PHENOL-LYASE FROM CITROBACTER INTERMEDIUS COMPLEX WITH 3-(4'- TITLE 2 HYDROXYPHENYL)PROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE AND CS+ ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE PHENOL-LYASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.99.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER FREUNDII; SOURCE 3 ORGANISM_TAXID: 546 KEYWDS LYASE, PLP-DEPENDENT ENZYME, PYRIDOXAL PHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.ANTSON,T.V.DEMIDKINA,K.S.WILSON REVDAT 4 03-APR-24 2TPL 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2TPL 1 VERSN REVDAT 2 24-FEB-09 2TPL 1 VERSN REVDAT 1 01-APR-97 2TPL 0 JRNL AUTH B.SUNDARARAJU,A.A.ANTSON,R.S.PHILLIPS,T.V.DEMIDKINA, JRNL AUTH 2 M.V.BARBOLINA,P.GOLLNICK,G.G.DODSON,K.S.WILSON JRNL TITL THE CRYSTAL STRUCTURE OF CITROBACTER FREUNDII TYROSINE JRNL TITL 2 PHENOL-LYASE COMPLEXED WITH 3-(4'-HYDROXYPHENYL)PROPIONIC JRNL TITL 3 ACID, TOGETHER WITH SITE-DIRECTED MUTAGENESIS AND KINETIC JRNL TITL 4 ANALYSIS, DEMONSTRATES THAT ARGININE 381 IS REQUIRED FOR JRNL TITL 5 SUBSTRATE SPECIFICITY. JRNL REF BIOCHEMISTRY V. 36 6502 1997 JRNL REFN ISSN 0006-2960 JRNL PMID 9174368 JRNL DOI 10.1021/BI962917+ REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.5 REMARK 3 NUMBER OF REFLECTIONS : 32151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7238 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 252 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2TPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178695. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAR-94 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9177 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : PT-COATED TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33108 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.0 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.13900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 50.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: TYROSINE PHENOL-LYASE HOLOENZYME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30-45% PEG 5000 MONOMETHYL ETHER, 0.4 REMARK 280 M CSCL, 50 MM TRIETHANOLAMINE BUFFER PH 8.0, 1 MM DTT, 0.2 MM REMARK 280 PLP, 50 MM HPPA REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 67.53500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 67.53500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 71.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 20010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -243.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 9 NE - CZ - NH2 ANGL. DEV. = 5.0 DEGREES REMARK 500 ASP A 58 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 TYR A 71 CB - CG - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 TYR A 71 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 100 CD - NE - CZ ANGL. DEV. = 13.2 DEGREES REMARK 500 ARG A 100 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 100 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 297 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 307 CD - NE - CZ ANGL. DEV. = 13.8 DEGREES REMARK 500 ARG A 307 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 318 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 323 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 350 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 397 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 410 CD - NE - CZ ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A 452 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 TYR B 44 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 TYR B 44 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 TYR B 71 CB - CG - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 TYR B 71 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 198 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 198 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 PHE B 266 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG B 350 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 TYR B 412 CB - CG - CD2 ANGL. DEV. = 4.4 DEGREES REMARK 500 TYR B 412 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 34.90 -86.08 REMARK 500 MET A 18 49.26 74.70 REMARK 500 MET A 121 168.21 59.72 REMARK 500 ASP A 168 -70.53 -47.74 REMARK 500 LLP A 257 -97.44 -90.37 REMARK 500 PHE A 266 146.10 -172.80 REMARK 500 MET A 288 153.58 -49.24 REMARK 500 TYR A 291 -29.65 -142.28 REMARK 500 CYS A 353 73.99 -114.86 REMARK 500 PRO B 7 39.11 -86.84 REMARK 500 MET B 18 61.51 67.17 REMARK 500 MET B 121 -178.92 60.82 REMARK 500 ARG B 217 51.63 -119.64 REMARK 500 LLP B 257 -108.66 -83.30 REMARK 500 TYR B 291 -21.71 -149.19 REMARK 500 CYS B 353 63.91 -111.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 39 -10.39 REMARK 500 SER A 74 -12.80 REMARK 500 ALA B 62 -10.54 REMARK 500 LYS B 161 -10.06 REMARK 500 MET B 288 -11.26 REMARK 500 LEU B 306 -10.21 REMARK 500 ARG B 452 10.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CS A 500 CS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 52 O REMARK 620 2 ASN A 262 O 80.1 REMARK 620 3 HOH A 535 O 119.8 100.3 REMARK 620 4 GLU B 69 OE1 92.1 100.7 144.3 REMARK 620 5 HOH B 636 O 78.6 133.9 58.1 120.5 REMARK 620 6 HOH B 666 O 163.6 115.2 65.1 79.9 93.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CS B 500 CS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 69 O REMARK 620 2 GLU A 69 OE1 85.3 REMARK 620 3 HOH A 515 O 43.2 128.5 REMARK 620 4 HOH A 571 O 90.2 80.0 95.4 REMARK 620 5 GLY B 52 O 78.8 93.3 80.5 167.6 REMARK 620 6 ASN B 262 O 161.3 93.0 135.7 107.9 82.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: PLP REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: PLP AND SUBSTRATE BINDING SITE. REMARK 800 REMARK 800 SITE_IDENTIFIER: CS REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: MONOVALENT CATION BINDING SITE. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CS A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CS B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HPP B 600 DBREF 2TPL A 1 456 UNP P31013 TPL_CITFR 1 456 DBREF 2TPL B 1 456 UNP P31013 TPL_CITFR 1 456 SEQADV 2TPL LLP A 257 UNP P31013 LYS 257 MODIFIED RESIDUE SEQADV 2TPL LLP B 257 UNP P31013 LYS 257 MODIFIED RESIDUE SEQRES 1 A 456 MET ASN TYR PRO ALA GLU PRO PHE ARG ILE LYS SER VAL SEQRES 2 A 456 GLU THR VAL SER MET ILE PRO ARG ASP GLU ARG LEU LYS SEQRES 3 A 456 LYS MET GLN GLU ALA GLY TYR ASN THR PHE LEU LEU ASN SEQRES 4 A 456 SER LYS ASP ILE TYR ILE ASP LEU LEU THR ASP SER GLY SEQRES 5 A 456 THR ASN ALA MET SER ASP LYS GLN TRP ALA GLY MET MET SEQRES 6 A 456 MET GLY ASP GLU ALA TYR ALA GLY SER GLU ASN PHE TYR SEQRES 7 A 456 HIS LEU GLU ARG THR VAL GLN GLU LEU PHE GLY PHE LYS SEQRES 8 A 456 HIS ILE VAL PRO THR HIS GLN GLY ARG GLY ALA GLU ASN SEQRES 9 A 456 LEU LEU SER GLN LEU ALA ILE LYS PRO GLY GLN TYR VAL SEQRES 10 A 456 ALA GLY ASN MET TYR PHE THR THR THR ARG TYR HIS GLN SEQRES 11 A 456 GLU LYS ASN GLY ALA VAL PHE VAL ASP ILE VAL ARG ASP SEQRES 12 A 456 GLU ALA HIS ASP ALA GLY LEU ASN ILE ALA PHE LYS GLY SEQRES 13 A 456 ASP ILE ASP LEU LYS LYS LEU GLN LYS LEU ILE ASP GLU SEQRES 14 A 456 LYS GLY ALA GLU ASN ILE ALA TYR ILE CYS LEU ALA VAL SEQRES 15 A 456 THR VAL ASN LEU ALA GLY GLY GLN PRO VAL SER MET ALA SEQRES 16 A 456 ASN MET ARG ALA VAL ARG GLU LEU THR ALA ALA HIS GLY SEQRES 17 A 456 ILE LYS VAL PHE TYR ASP ALA THR ARG CYS VAL GLU ASN SEQRES 18 A 456 ALA TYR PHE ILE LYS GLU GLN GLU GLN GLY PHE GLU ASN SEQRES 19 A 456 LYS SER ILE ALA GLU ILE VAL HIS GLU MET PHE SER TYR SEQRES 20 A 456 ALA ASP GLY CYS THR MET SER GLY LYS LLP ASP CYS LEU SEQRES 21 A 456 VAL ASN ILE GLY GLY PHE LEU CYS MET ASN ASP ASP GLU SEQRES 22 A 456 MET PHE SER SER ALA LYS GLU LEU VAL VAL VAL TYR GLU SEQRES 23 A 456 GLY MET PRO SER TYR GLY GLY LEU ALA GLY ARG ASP MET SEQRES 24 A 456 GLU ALA MET ALA ILE GLY LEU ARG GLU ALA MET GLN TYR SEQRES 25 A 456 GLU TYR ILE GLU HIS ARG VAL LYS GLN VAL ARG TYR LEU SEQRES 26 A 456 GLY ASP LYS LEU LYS ALA ALA GLY VAL PRO ILE VAL GLU SEQRES 27 A 456 PRO VAL GLY GLY HIS ALA VAL PHE LEU ASP ALA ARG ARG SEQRES 28 A 456 PHE CYS GLU HIS LEU THR GLN ASP GLU PHE PRO ALA GLN SEQRES 29 A 456 SER LEU ALA ALA SER ILE TYR VAL GLU THR GLY VAL ARG SEQRES 30 A 456 SER MET GLU ARG GLY ILE ILE SER ALA GLY ARG ASN ASN SEQRES 31 A 456 VAL THR GLY GLU HIS HIS ARG PRO LYS LEU GLU THR VAL SEQRES 32 A 456 ARG LEU THR ILE PRO ARG ARG VAL TYR THR TYR ALA HIS SEQRES 33 A 456 MET ASP VAL VAL ALA ASP GLY ILE ILE LYS LEU TYR GLN SEQRES 34 A 456 HIS LYS GLU ASP ILE ARG GLY LEU LYS PHE ILE TYR GLU SEQRES 35 A 456 PRO LYS GLN LEU ARG PHE PHE THR ALA ARG PHE ASP TYR SEQRES 36 A 456 ILE SEQRES 1 B 456 MET ASN TYR PRO ALA GLU PRO PHE ARG ILE LYS SER VAL SEQRES 2 B 456 GLU THR VAL SER MET ILE PRO ARG ASP GLU ARG LEU LYS SEQRES 3 B 456 LYS MET GLN GLU ALA GLY TYR ASN THR PHE LEU LEU ASN SEQRES 4 B 456 SER LYS ASP ILE TYR ILE ASP LEU LEU THR ASP SER GLY SEQRES 5 B 456 THR ASN ALA MET SER ASP LYS GLN TRP ALA GLY MET MET SEQRES 6 B 456 MET GLY ASP GLU ALA TYR ALA GLY SER GLU ASN PHE TYR SEQRES 7 B 456 HIS LEU GLU ARG THR VAL GLN GLU LEU PHE GLY PHE LYS SEQRES 8 B 456 HIS ILE VAL PRO THR HIS GLN GLY ARG GLY ALA GLU ASN SEQRES 9 B 456 LEU LEU SER GLN LEU ALA ILE LYS PRO GLY GLN TYR VAL SEQRES 10 B 456 ALA GLY ASN MET TYR PHE THR THR THR ARG TYR HIS GLN SEQRES 11 B 456 GLU LYS ASN GLY ALA VAL PHE VAL ASP ILE VAL ARG ASP SEQRES 12 B 456 GLU ALA HIS ASP ALA GLY LEU ASN ILE ALA PHE LYS GLY SEQRES 13 B 456 ASP ILE ASP LEU LYS LYS LEU GLN LYS LEU ILE ASP GLU SEQRES 14 B 456 LYS GLY ALA GLU ASN ILE ALA TYR ILE CYS LEU ALA VAL SEQRES 15 B 456 THR VAL ASN LEU ALA GLY GLY GLN PRO VAL SER MET ALA SEQRES 16 B 456 ASN MET ARG ALA VAL ARG GLU LEU THR ALA ALA HIS GLY SEQRES 17 B 456 ILE LYS VAL PHE TYR ASP ALA THR ARG CYS VAL GLU ASN SEQRES 18 B 456 ALA TYR PHE ILE LYS GLU GLN GLU GLN GLY PHE GLU ASN SEQRES 19 B 456 LYS SER ILE ALA GLU ILE VAL HIS GLU MET PHE SER TYR SEQRES 20 B 456 ALA ASP GLY CYS THR MET SER GLY LYS LLP ASP CYS LEU SEQRES 21 B 456 VAL ASN ILE GLY GLY PHE LEU CYS MET ASN ASP ASP GLU SEQRES 22 B 456 MET PHE SER SER ALA LYS GLU LEU VAL VAL VAL TYR GLU SEQRES 23 B 456 GLY MET PRO SER TYR GLY GLY LEU ALA GLY ARG ASP MET SEQRES 24 B 456 GLU ALA MET ALA ILE GLY LEU ARG GLU ALA MET GLN TYR SEQRES 25 B 456 GLU TYR ILE GLU HIS ARG VAL LYS GLN VAL ARG TYR LEU SEQRES 26 B 456 GLY ASP LYS LEU LYS ALA ALA GLY VAL PRO ILE VAL GLU SEQRES 27 B 456 PRO VAL GLY GLY HIS ALA VAL PHE LEU ASP ALA ARG ARG SEQRES 28 B 456 PHE CYS GLU HIS LEU THR GLN ASP GLU PHE PRO ALA GLN SEQRES 29 B 456 SER LEU ALA ALA SER ILE TYR VAL GLU THR GLY VAL ARG SEQRES 30 B 456 SER MET GLU ARG GLY ILE ILE SER ALA GLY ARG ASN ASN SEQRES 31 B 456 VAL THR GLY GLU HIS HIS ARG PRO LYS LEU GLU THR VAL SEQRES 32 B 456 ARG LEU THR ILE PRO ARG ARG VAL TYR THR TYR ALA HIS SEQRES 33 B 456 MET ASP VAL VAL ALA ASP GLY ILE ILE LYS LEU TYR GLN SEQRES 34 B 456 HIS LYS GLU ASP ILE ARG GLY LEU LYS PHE ILE TYR GLU SEQRES 35 B 456 PRO LYS GLN LEU ARG PHE PHE THR ALA ARG PHE ASP TYR SEQRES 36 B 456 ILE MODRES 2TPL LLP A 257 LYS MODRES 2TPL LLP B 257 LYS HET LLP A 257 24 HET LLP B 257 24 HET CS A 500 1 HET CS B 500 1 HET HPP B 600 12 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM CS CESIUM ION HETNAM HPP HYDROXYPHENYL PROPIONIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 CS 2(CS 1+) FORMUL 5 HPP C9 H10 O3 FORMUL 6 HOH *252(H2 O) HELIX 1 1 ARG A 21 GLU A 30 1 10 HELIX 2 2 THR A 35 LEU A 37 5 3 HELIX 3 3 SER A 40 ASP A 42 5 3 HELIX 4 4 ASP A 58 MET A 66 1 9 HELIX 5 5 GLU A 75 PHE A 88 1 14 HELIX 6 6 GLY A 99 ALA A 110 1 12 HELIX 7 7 THR A 124 LYS A 132 1 9 HELIX 8 8 ASP A 143 HIS A 146 5 4 HELIX 9 9 LEU A 160 LYS A 170 1 11 HELIX 10 10 ALA A 172 ASN A 174 5 3 HELIX 11 11 MET A 194 ALA A 206 1 13 HELIX 12 12 CYS A 218 GLN A 228 1 11 HELIX 13 13 ILE A 237 TYR A 247 1 11 HELIX 14 14 ASP A 272 TYR A 285 1 14 HELIX 15 15 GLY A 296 MET A 310 1 15 HELIX 16 16 TYR A 312 ALA A 332 1 21 HELIX 17 17 ALA A 349 PHE A 352 1 4 HELIX 18 18 GLN A 358 GLU A 360 5 3 HELIX 19 19 PRO A 362 THR A 374 1 13 HELIX 20 20 ILE A 383 ALA A 386 1 4 HELIX 21 21 TYR A 414 ASP A 433 1 20 HELIX 22 22 ARG A 447 THR A 450 1 4 HELIX 23 23 ARG B 21 GLU B 30 1 10 HELIX 24 24 THR B 35 LEU B 37 5 3 HELIX 25 25 SER B 40 ASP B 42 5 3 HELIX 26 26 ASP B 58 MET B 66 1 9 HELIX 27 27 GLU B 75 PHE B 88 1 14 HELIX 28 28 GLY B 99 LEU B 109 1 11 HELIX 29 29 THR B 124 ASN B 133 1 10 HELIX 30 30 ASP B 143 HIS B 146 5 4 HELIX 31 31 LEU B 160 LYS B 170 1 11 HELIX 32 32 ALA B 172 ASN B 174 5 3 HELIX 33 33 MET B 194 ALA B 206 1 13 HELIX 34 34 CYS B 218 GLN B 228 1 11 HELIX 35 35 ILE B 237 TYR B 247 1 11 HELIX 36 36 ASP B 272 TYR B 285 1 14 HELIX 37 37 GLY B 296 MET B 310 1 15 HELIX 38 38 TYR B 312 ALA B 331 1 20 HELIX 39 39 ALA B 349 PHE B 352 1 4 HELIX 40 40 GLN B 358 GLU B 360 5 3 HELIX 41 41 PRO B 362 THR B 374 1 13 HELIX 42 42 ILE B 383 ALA B 386 1 4 HELIX 43 43 TYR B 414 ASP B 433 1 20 HELIX 44 44 ARG B 447 THR B 450 1 4 SHEET 1 A 7 HIS A 92 THR A 96 0 SHEET 2 A 7 GLY A 265 MET A 269 -1 N MET A 269 O HIS A 92 SHEET 3 A 7 GLY A 250 SER A 254 -1 N MET A 253 O PHE A 266 SHEET 4 A 7 VAL A 211 ASP A 214 1 N TYR A 213 O GLY A 250 SHEET 5 A 7 ILE A 175 ALA A 181 1 N ILE A 178 O PHE A 212 SHEET 6 A 7 TYR A 116 GLY A 119 1 N TYR A 116 O ALA A 176 SHEET 7 A 7 VAL A 136 ASP A 139 1 N VAL A 136 O VAL A 117 SHEET 1 B 3 ALA A 344 ASP A 348 0 SHEET 2 B 3 THR A 402 THR A 406 -1 N LEU A 405 O VAL A 345 SHEET 3 B 3 MET A 379 ARG A 381 -1 N ARG A 381 O THR A 402 SHEET 1 C 7 HIS B 92 THR B 96 0 SHEET 2 C 7 GLY B 265 MET B 269 -1 N MET B 269 O HIS B 92 SHEET 3 C 7 GLY B 250 SER B 254 -1 N MET B 253 O PHE B 266 SHEET 4 C 7 VAL B 211 ASP B 214 1 N TYR B 213 O GLY B 250 SHEET 5 C 7 ILE B 175 ALA B 181 1 N ILE B 178 O PHE B 212 SHEET 6 C 7 TYR B 116 GLY B 119 1 N TYR B 116 O ALA B 176 SHEET 7 C 7 VAL B 136 ASP B 139 1 N VAL B 136 O VAL B 117 SHEET 1 D 3 ALA B 344 ASP B 348 0 SHEET 2 D 3 THR B 402 THR B 406 -1 N LEU B 405 O VAL B 345 SHEET 3 D 3 MET B 379 ARG B 381 -1 N ARG B 381 O THR B 402 SHEET 1 E 2 LEU A 437 TYR A 441 0 SHEET 2 E 2 ARG A 452 TYR A 455 -1 N ASP A 454 O LYS A 438 SHEET 1 F 2 LEU B 437 TYR B 441 0 SHEET 2 F 2 ARG B 452 TYR B 455 -1 N ASP B 454 O LYS B 438 LINK C LYS A 256 N LLP A 257 1555 1555 1.33 LINK C LLP A 257 N ASP A 258 1555 1555 1.33 LINK C LYS B 256 N LLP B 257 1555 1555 1.33 LINK C LLP B 257 N ASP B 258 1555 1555 1.33 LINK O GLY A 52 CS CS A 500 1555 1555 3.03 LINK O GLU A 69 CS CS B 500 1555 1555 3.63 LINK OE1 GLU A 69 CS CS B 500 1555 1555 3.15 LINK O ASN A 262 CS CS A 500 1555 1555 2.92 LINK CS CS A 500 O HOH A 535 1555 1555 3.29 LINK CS CS A 500 OE1 GLU B 69 1555 1555 3.15 LINK CS CS A 500 O HOH B 636 1555 1555 2.91 LINK CS CS A 500 O HOH B 666 1555 1555 2.90 LINK O HOH A 515 CS CS B 500 1555 1555 3.06 LINK O HOH A 571 CS CS B 500 1555 1555 2.94 LINK O GLY B 52 CS CS B 500 1555 1555 3.02 LINK O ASN B 262 CS CS B 500 1555 1555 3.05 CISPEP 1 VAL A 182 THR A 183 0 -2.22 CISPEP 2 GLU A 338 PRO A 339 0 -13.46 CISPEP 3 VAL B 182 THR B 183 0 -2.33 CISPEP 4 GLU B 338 PRO B 339 0 -21.76 SITE 1 PLP 5 LLP A 257 ASP A 214 ASN A 185 TYR B 71 SITE 2 PLP 5 ARG B 404 SITE 1 CS 3 GLU A 69 GLY B 52 ASN B 262 SITE 1 AC1 5 GLY A 52 ASN A 262 GLU B 69 HOH B 636 SITE 2 AC1 5 HOH B 666 SITE 1 AC2 5 GLU A 69 HOH A 515 HOH A 571 GLY B 52 SITE 2 AC2 5 ASN B 262 SITE 1 AC3 4 TYR A 71 THR B 49 ARG B 404 HOH B 684 CRYST1 135.070 143.910 59.800 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007404 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016722 0.00000 MTRIX1 1 0.978000 -0.208000 -0.004000 0.04996 1 MTRIX2 1 -0.208000 -0.978000 0.001000 -0.09492 1 MTRIX3 1 -0.004000 0.000000 -1.000000 15.28941 1