HEADER TRANSFERASE 13-MAR-07 2UVQ TITLE CRYSTAL STRUCTURE OF HUMAN URIDINE-CYTIDINE KINASE 1 IN COMPLEX WITH TITLE 2 ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIDINE-CYTIDINE KINASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 22-243; COMPND 5 SYNONYM: UCK 1, URIDINE MONOPHOSPHOKINASE 1, CYTIDINE COMPND 6 MONOPHOSPHOKINASE 1; COMPND 7 EC: 2.7.1.48; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS UCK, KINASE, TRANSFERASE, ATP-BINDING, NUCLEOSIDE KINASE, NUCLEOTIDE- KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR U.KOSINSKA,P.STENMARK,C.ARROWSMITH,H.BERGLUND,R.BUSAM,R.COLLINS, AUTHOR 2 A.EDWARDS,U.B.ERICSSON,S.FLODIN,A.FLORES,S.GRASLUND,M.HAMMARSTROM, AUTHOR 3 B.M.HALLBERG,L.HOLMBERG SCHIAVONE,M.HOGBOM,I.JOHANSSON,T.KARLBERG, AUTHOR 4 T.KOTENYOVA,M.MOCHE,M.E.P.NILSSON,T.NYMAN,D.OGG,C.PERSSON, AUTHOR 5 J.SAGEMARK,M.SUNDSTROM,J.UPPENBERG,M.UPPSTEN,A.G.THORSELL,S.VAN DEN AUTHOR 6 BERG,J.WEIGELT,M.WELIN,P.NORDLUND REVDAT 4 13-DEC-23 2UVQ 1 REMARK REVDAT 3 13-JUL-11 2UVQ 1 VERSN REVDAT 2 24-FEB-09 2UVQ 1 VERSN REVDAT 1 27-MAR-07 2UVQ 0 JRNL AUTH U.KOSINSKA,P.STENMARK,C.ARROWSMITH,H.BERGLUND,R.BUSAM, JRNL AUTH 2 R.COLLINS,A.EDWARDS,U.B.ERICSSON,S.FLODIN,A.FLORES, JRNL AUTH 3 S.GRASLUND,M.HAMMARSTROM,B.M.HALLBERG,L.HOLMBERG SCHIAVONE, JRNL AUTH 4 M.HOGBOM,I.JOHANSSON,T.KARLBERG,T.KOTENYOVA,M.MOCHE, JRNL AUTH 5 M.E.P.NILSSON,T.NYMAN,D.OGG,C.PERSSON,J.SAGEMARK, JRNL AUTH 6 M.SUNDSTROM,J.UPPENBERG,M.UPPSTEN,A.G.THORSELL, JRNL AUTH 7 S.VAN DEN BERG,J.WEIGELT,M.WELIN,P.NORDLUND JRNL TITL STRUCTURE OF HUMAN URIDINE-CYTIDINE KINASE 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 6704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 330 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 482 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 23 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1692 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.393 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.308 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.166 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1751 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1181 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2375 ; 1.284 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2871 ; 0.851 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 5.285 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;31.657 ;23.810 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 306 ;17.870 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.954 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1908 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 361 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 397 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1239 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 859 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 979 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 45 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.132 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 20 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.119 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1369 ; 0.707 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1710 ; 0.891 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 807 ; 1.266 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 665 ; 1.892 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3760 -24.1430 -20.2150 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.6428 REMARK 3 T33: 0.4312 T12: -0.0030 REMARK 3 T13: -0.0761 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 4.7399 L22: 1.1940 REMARK 3 L33: 2.7742 L12: -0.2172 REMARK 3 L13: -1.3599 L23: 0.2600 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: -0.1307 S13: 0.1707 REMARK 3 S21: 0.1460 S22: -0.1859 S23: -0.1685 REMARK 3 S31: -0.3728 S32: 0.4538 S33: 0.2016 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 12.2780 -19.6830 -18.0600 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.8094 REMARK 3 T33: 0.6028 T12: -0.1256 REMARK 3 T13: -0.0759 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 5.1977 L22: 7.6972 REMARK 3 L33: 12.7248 L12: 3.0335 REMARK 3 L13: -6.2564 L23: 1.0981 REMARK 3 S TENSOR REMARK 3 S11: -0.0795 S12: -0.4091 S13: 0.9070 REMARK 3 S21: -0.8453 S22: 0.4625 S23: -0.0761 REMARK 3 S31: -1.6227 S32: 1.1451 S33: -0.3830 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 168 REMARK 3 ORIGIN FOR THE GROUP (A): -4.4720 -28.5760 -23.8970 REMARK 3 T TENSOR REMARK 3 T11: -0.0425 T22: 0.4120 REMARK 3 T33: 0.3729 T12: 0.0506 REMARK 3 T13: -0.0061 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 3.3730 L22: 2.4058 REMARK 3 L33: 10.3708 L12: 0.7911 REMARK 3 L13: 1.0093 L23: 0.4461 REMARK 3 S TENSOR REMARK 3 S11: -0.1921 S12: -0.4768 S13: -0.1632 REMARK 3 S21: -0.1318 S22: 0.2213 S23: -0.0932 REMARK 3 S31: 0.2841 S32: 0.3294 S33: -0.0292 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 169 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1740 -13.5780 -38.1750 REMARK 3 T TENSOR REMARK 3 T11: 0.6018 T22: 0.8730 REMARK 3 T33: 0.8624 T12: -0.2272 REMARK 3 T13: -0.2499 T23: 0.1899 REMARK 3 L TENSOR REMARK 3 L11: 7.5349 L22: 5.1491 REMARK 3 L33: 1.0256 L12: -1.5124 REMARK 3 L13: -1.6129 L23: -1.0580 REMARK 3 S TENSOR REMARK 3 S11: -0.2772 S12: -0.0154 S13: 1.2615 REMARK 3 S21: 0.8814 S22: 0.4317 S23: -1.9478 REMARK 3 S31: -1.2500 S32: 1.2334 S33: -0.1546 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 235 REMARK 3 ORIGIN FOR THE GROUP (A): -11.2810 -27.3690 -19.3830 REMARK 3 T TENSOR REMARK 3 T11: -0.0291 T22: 0.4426 REMARK 3 T33: 0.3133 T12: -0.0110 REMARK 3 T13: -0.0540 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 5.0239 L22: 1.7230 REMARK 3 L33: 9.2597 L12: -0.5873 REMARK 3 L13: -3.2006 L23: 2.0382 REMARK 3 S TENSOR REMARK 3 S11: 0.1296 S12: -0.3099 S13: 0.1491 REMARK 3 S21: 0.0722 S22: -0.1749 S23: 0.0472 REMARK 3 S31: 0.2981 S32: -0.1158 S33: 0.0453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2UVQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1290031898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12509 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XRJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8-1.0 M SUCCINIC ACID PH 6.7-7.3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 157.73800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.86900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 157.73800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.86900 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 157.73800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 78.86900 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 157.73800 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 78.86900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -33.95950 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -58.81958 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -78.86900 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 -33.95950 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 -58.81958 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -78.86900 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 GLY A 8 REMARK 465 VAL A 9 REMARK 465 ASP A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 THR A 13 REMARK 465 GLU A 14 REMARK 465 ASN A 15 REMARK 465 LEU A 16 REMARK 465 TYR A 17 REMARK 465 PHE A 18 REMARK 465 GLN A 19 REMARK 465 SER A 20 REMARK 465 MET A 21 REMARK 465 ARG A 176 REMARK 465 GLY A 177 REMARK 465 ARG A 178 REMARK 465 CYS A 236 REMARK 465 LYS A 237 REMARK 465 TRP A 238 REMARK 465 HIS A 239 REMARK 465 ARG A 240 REMARK 465 GLY A 241 REMARK 465 GLY A 242 REMARK 465 SER A 243 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 51 CB CG CD OE1 OE2 REMARK 470 LYS A 81 CB CG CD CE NZ REMARK 470 GLN A 83 CB CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 -157.70 -111.30 REMARK 500 ALA A 33 17.15 59.68 REMARK 500 GLU A 51 18.03 -68.90 REMARK 500 LYS A 81 30.80 -66.95 REMARK 500 ASP A 173 56.21 -116.62 REMARK 500 VAL A 174 52.32 -117.33 REMARK 500 ARG A 212 -82.26 71.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A1236 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JEO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN URIDINE-CYTIDINE KINASE 1 DBREF 2UVQ A -1 21 PDB 2UVQ 2UVQ -1 21 DBREF 2UVQ A 22 243 UNP Q9HA47 UCK1_HUMAN 22 243 SEQRES 1 A 245 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 245 GLY THR GLU ASN LEU TYR PHE GLN SER MET ARG PRO PHE SEQRES 3 A 245 LEU ILE GLY VAL SER GLY GLY THR ALA SER GLY LYS SER SEQRES 4 A 245 THR VAL CYS GLU LYS ILE MET GLU LEU LEU GLY GLN ASN SEQRES 5 A 245 GLU VAL GLU GLN ARG GLN ARG LYS VAL VAL ILE LEU SER SEQRES 6 A 245 GLN ASP ARG PHE TYR LYS VAL LEU THR ALA GLU GLN LYS SEQRES 7 A 245 ALA LYS ALA LEU LYS GLY GLN TYR ASN PHE ASP HIS PRO SEQRES 8 A 245 ASP ALA PHE ASP ASN ASP LEU MET HIS ARG THR LEU LYS SEQRES 9 A 245 ASN ILE VAL GLU GLY LYS THR VAL GLU VAL PRO THR TYR SEQRES 10 A 245 ASP PHE VAL THR HIS SER ARG LEU PRO GLU THR THR VAL SEQRES 11 A 245 VAL TYR PRO ALA ASP VAL VAL LEU PHE GLU GLY ILE LEU SEQRES 12 A 245 VAL PHE TYR SER GLN GLU ILE ARG ASP MET PHE HIS LEU SEQRES 13 A 245 ARG LEU PHE VAL ASP THR ASP SER ASP VAL ARG LEU SER SEQRES 14 A 245 ARG ARG VAL LEU ARG ASP VAL ARG ARG GLY ARG ASP LEU SEQRES 15 A 245 GLU GLN ILE LEU THR GLN TYR THR THR PHE VAL LYS PRO SEQRES 16 A 245 ALA PHE GLU GLU PHE CYS LEU PRO THR LYS LYS TYR ALA SEQRES 17 A 245 ASP VAL ILE ILE PRO ARG GLY VAL ASP ASN MET VAL ALA SEQRES 18 A 245 ILE ASN LEU ILE VAL GLN HIS ILE GLN ASP ILE LEU ASN SEQRES 19 A 245 GLY ASP ILE CYS LYS TRP HIS ARG GLY GLY SER HET ADP A1236 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 HOH *15(H2 O) HELIX 1 1 GLY A 35 LEU A 47 1 13 HELIX 2 2 GLY A 48 VAL A 52 5 5 HELIX 3 3 ASP A 65 PHE A 67 5 3 HELIX 4 4 THR A 72 LYS A 81 1 10 HELIX 5 5 HIS A 88 ALA A 91 5 4 HELIX 6 6 ASP A 93 GLU A 106 1 14 HELIX 7 7 SER A 145 ASP A 150 1 6 HELIX 8 8 ASP A 161 ASP A 173 1 13 HELIX 9 9 ASP A 179 PHE A 190 1 12 HELIX 10 10 PHE A 190 CYS A 199 1 10 HELIX 11 11 LEU A 200 ALA A 206 5 7 HELIX 12 12 ASN A 216 GLY A 233 1 18 SHEET 1 AA 5 VAL A 59 SER A 63 0 SHEET 2 AA 5 VAL A 134 GLU A 138 1 O VAL A 134 N VAL A 60 SHEET 3 AA 5 PHE A 24 GLY A 30 1 O PHE A 24 N VAL A 135 SHEET 4 AA 5 LEU A 154 ASP A 159 1 O LEU A 154 N GLY A 27 SHEET 5 AA 5 VAL A 208 PRO A 211 1 O VAL A 208 N PHE A 157 SHEET 1 AB 2 VAL A 110 VAL A 112 0 SHEET 2 AB 2 THR A 127 VAL A 129 -1 O THR A 127 N VAL A 112 SHEET 1 AC 2 THR A 114 ASP A 116 0 SHEET 2 AC 2 SER A 121 LEU A 123 -1 O SER A 121 N ASP A 116 CISPEP 1 ARG A 22 PRO A 23 0 7.12 SITE 1 AC1 12 THR A 32 ALA A 33 SER A 34 GLY A 35 SITE 2 AC1 12 LYS A 36 SER A 37 THR A 38 GLU A 138 SITE 3 AC1 12 ARG A 168 ARG A 172 VAL A 214 ASP A 215 CRYST1 67.919 67.919 236.607 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014723 0.008501 0.000000 0.00000 SCALE2 0.000000 0.017001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004226 0.00000