HEADER TRANSCRIPTION 28-MAR-07 2UXH TITLE TTGR IN COMPLEX WITH QUERCETIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TOLUENE EFFLUX PUMP TTGABC OPERON REPRESSOR, TRANSCRIPTIONAL COMPND 5 REPRESSOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28(B) KEYWDS TRANSCRIPTION, DNA-BINDING, TETR FAMILY EXPDTA X-RAY DIFFRACTION AUTHOR Y.ALGUEL,C.MENG,W.TERAN,T.KRELL,J.L.RAMOS,M.-T.GALLEGOS,X.ZHANG REVDAT 5 08-MAY-24 2UXH 1 REMARK REVDAT 4 13-JUL-11 2UXH 1 VERSN REVDAT 3 24-FEB-09 2UXH 1 VERSN REVDAT 2 22-MAY-07 2UXH 1 JRNL REVDAT 1 08-MAY-07 2UXH 0 JRNL AUTH Y.ALGUEL,C.MENG,W.TERAN,T.KRELL,J.L.RAMOS,M.-T.GALLEGOS, JRNL AUTH 2 X.ZHANG JRNL TITL CRYSTAL STRUCTURES OF MULTIDRUG BINDING PROTEIN TTGR IN JRNL TITL 2 COMPLEX WITH ANTIBIOTICS AND PLANT ANTIMICROBIALS. JRNL REF J.MOL.BIOL. V. 369 829 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17466326 JRNL DOI 10.1016/J.JMB.2007.03.062 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.8 REMARK 3 NUMBER OF REFLECTIONS : 15448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1273 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 924 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3200 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.43000 REMARK 3 B22 (A**2) : -1.42000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.902 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.363 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.273 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.520 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.869 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3296 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4472 ; 1.563 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 409 ; 6.500 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;39.112 ;23.165 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 559 ;20.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;22.221 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 509 ; 0.159 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2516 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1834 ; 0.279 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2258 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 215 ; 0.223 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.322 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.359 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2105 ; 0.635 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3245 ; 0.927 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1358 ; 0.641 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1227 ; 0.801 ; 1.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 53 REMARK 3 ORIGIN FOR THE GROUP (A): -1.3813 10.5096 19.7197 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: -0.2033 REMARK 3 T33: -0.0613 T12: -0.0261 REMARK 3 T13: 0.0902 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 8.5226 L22: 7.3317 REMARK 3 L33: 5.1115 L12: 2.3782 REMARK 3 L13: -1.7139 L23: -2.7578 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: -0.6501 S13: -0.5046 REMARK 3 S21: 0.3115 S22: -0.1154 S23: 0.6183 REMARK 3 S31: 0.2927 S32: 0.0108 S33: 0.1625 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 54 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7377 36.4093 12.1132 REMARK 3 T TENSOR REMARK 3 T11: -0.0318 T22: -0.1889 REMARK 3 T33: -0.1752 T12: 0.0271 REMARK 3 T13: 0.0262 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.7160 L22: 4.4186 REMARK 3 L33: 2.8949 L12: 0.4223 REMARK 3 L13: -0.8360 L23: -0.6629 REMARK 3 S TENSOR REMARK 3 S11: 0.3450 S12: -0.1331 S13: 0.3284 REMARK 3 S21: 0.3637 S22: -0.3025 S23: 0.4326 REMARK 3 S31: -0.4627 S32: -0.1581 S33: -0.0425 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3542 9.9217 -11.0734 REMARK 3 T TENSOR REMARK 3 T11: 0.0847 T22: -0.1708 REMARK 3 T33: -0.0919 T12: 0.1588 REMARK 3 T13: 0.2086 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 7.7618 L22: 6.2381 REMARK 3 L33: 6.3661 L12: -2.6908 REMARK 3 L13: -4.9962 L23: 1.9718 REMARK 3 S TENSOR REMARK 3 S11: -0.1278 S12: 0.3603 S13: -0.9908 REMARK 3 S21: -0.6403 S22: -0.4757 S23: -0.2166 REMARK 3 S31: 0.9237 S32: -0.0442 S33: 0.6035 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 210 REMARK 3 ORIGIN FOR THE GROUP (A): 15.1851 35.8377 -2.6709 REMARK 3 T TENSOR REMARK 3 T11: -0.0113 T22: -0.1879 REMARK 3 T33: -0.2070 T12: 0.0265 REMARK 3 T13: 0.0152 T23: 0.1145 REMARK 3 L TENSOR REMARK 3 L11: 2.7711 L22: 4.3178 REMARK 3 L33: 2.9359 L12: 0.4342 REMARK 3 L13: -0.7759 L23: 0.3945 REMARK 3 S TENSOR REMARK 3 S11: 0.1712 S12: 0.2075 S13: 0.1884 REMARK 3 S21: -0.4255 S22: -0.2102 S23: -0.3434 REMARK 3 S31: -0.4394 S32: 0.0988 S33: 0.0390 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1211 A 1211 REMARK 3 RESIDUE RANGE : B 1211 B 1211 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2571 35.7941 4.8863 REMARK 3 T TENSOR REMARK 3 T11: 0.0012 T22: -0.0012 REMARK 3 T33: -0.0008 T12: -0.0004 REMARK 3 T13: -0.0006 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 13.0025 L22: 7.8026 REMARK 3 L33: 18.5121 L12: 4.9408 REMARK 3 L13: 15.5051 L23: 6.2577 REMARK 3 S TENSOR REMARK 3 S11: 0.4207 S12: -0.4419 S13: 0.1124 REMARK 3 S21: 0.5514 S22: -2.1236 S23: 0.0522 REMARK 3 S31: 0.2442 S32: -1.1732 S33: 1.7029 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2001 A 2107 REMARK 3 RESIDUE RANGE : B 2001 B 2084 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9590 31.8823 3.6476 REMARK 3 T TENSOR REMARK 3 T11: -0.1470 T22: 0.2819 REMARK 3 T33: 0.1903 T12: -0.0028 REMARK 3 T13: -0.0578 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 0.6309 L22: 0.4932 REMARK 3 L33: 0.8991 L12: 0.1904 REMARK 3 L13: -0.4654 L23: -0.0350 REMARK 3 S TENSOR REMARK 3 S11: 0.0043 S12: 0.0622 S13: 0.0368 REMARK 3 S21: 0.0245 S22: -0.0489 S23: -0.0581 REMARK 3 S31: -0.1546 S32: 0.0112 S33: 0.0446 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2UXH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1290032099. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9756 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16721 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M BIS-TRIS PH 6.5, REMARK 280 25% (V/V) PEG3350, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.32500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 115.94050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.32500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 115.94050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 THR B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 5 OG1 CG2 REMARK 470 GLN A 10 CG CD OE1 NE2 REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 27 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 40 CG CD1 CD2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 ASP A 196 CG OD1 OD2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 LEU B 143 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 5 CA - C - N ANGL. DEV. = -21.6 DEGREES REMARK 500 THR A 5 O - C - N ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 45 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 LEU A 100 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 116 29.38 -141.40 REMARK 500 PRO A 155 133.28 -34.58 REMARK 500 ASP A 183 9.01 -64.50 REMARK 500 SER A 184 -62.76 -93.19 REMARK 500 GLU B 7 -83.85 -115.08 REMARK 500 GLN B 10 -72.93 -13.05 REMARK 500 GLU B 11 32.08 -93.21 REMARK 500 LYS B 116 20.96 -147.84 REMARK 500 ARG B 151 -176.52 -177.13 REMARK 500 GLU B 157 30.56 70.13 REMARK 500 ASP B 159 106.61 -58.90 REMARK 500 ASP B 183 46.74 -77.03 REMARK 500 SER B 184 -47.63 -137.41 REMARK 500 ARG B 203 -82.89 -97.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 6 GLU B 7 78.71 REMARK 500 GLU B 7 GLU B 8 126.79 REMARK 500 ALA B 9 GLN B 10 137.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR A 5 12.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUE A1211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUE B1211 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2UXI RELATED DB: PDB REMARK 900 PHLORETIN IN COMPLEX WITH TTGR DBREF 2UXH A 1 210 UNP Q9AIU0 TTGR_PSEPU 1 210 DBREF 2UXH B 1 210 UNP Q9AIU0 TTGR_PSEPU 1 210 SEQRES 1 A 210 MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR ARG SEQRES 2 A 210 ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR LYS SEQRES 3 A 210 ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA GLU SEQRES 4 A 210 LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS PHE SEQRES 5 A 210 ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SER SEQRES 6 A 210 LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER GLU SEQRES 7 A 210 SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG LYS SEQRES 8 A 210 LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP ALA SEQRES 9 A 210 ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS CYS SEQRES 10 A 210 GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN ARG SEQRES 11 A 210 GLN SER ALA VAL LEU ASP CYS HIS LYS GLY ILE THR LEU SEQRES 12 A 210 ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO GLY SEQRES 13 A 210 GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA MET PHE ALA SEQRES 14 A 210 TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU PRO SEQRES 15 A 210 ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP VAL SEQRES 16 A 210 ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA LEU SEQRES 17 A 210 ARG LYS SEQRES 1 B 210 MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR ARG SEQRES 2 B 210 ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR LYS SEQRES 3 B 210 ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA GLU SEQRES 4 B 210 LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS PHE SEQRES 5 B 210 ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SER SEQRES 6 B 210 LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER GLU SEQRES 7 B 210 SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG LYS SEQRES 8 B 210 LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP ALA SEQRES 9 B 210 ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS CYS SEQRES 10 B 210 GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN ARG SEQRES 11 B 210 GLN SER ALA VAL LEU ASP CYS HIS LYS GLY ILE THR LEU SEQRES 12 B 210 ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO GLY SEQRES 13 B 210 GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA MET PHE ALA SEQRES 14 B 210 TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU PRO SEQRES 15 B 210 ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP VAL SEQRES 16 B 210 ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA LEU SEQRES 17 B 210 ARG LYS HET QUE A1211 22 HET QUE B1211 22 HETNAM QUE 3,5,7,3',4'-PENTAHYDROXYFLAVONE HETSYN QUE QUERCETIN FORMUL 3 QUE 2(C15 H10 O7) FORMUL 5 HOH *191(H2 O) HELIX 1 1 THR A 5 GLY A 28 1 24 HELIX 2 2 THR A 33 GLY A 42 1 10 HELIX 3 3 THR A 44 PHE A 52 1 9 HELIX 4 4 ASN A 54 LEU A 66 1 13 HELIX 5 5 HIS A 67 THR A 69 5 3 HELIX 6 6 HIS A 70 SER A 79 1 10 HELIX 7 7 ASP A 84 ASP A 103 1 20 HELIX 8 8 ASP A 103 LYS A 116 1 14 HELIX 9 9 THR A 120 ASP A 122 5 3 HELIX 10 10 MET A 123 ARG A 151 1 29 HELIX 11 11 ASP A 159 LEU A 181 1 23 HELIX 12 12 ASP A 190 SER A 205 1 16 HELIX 13 13 PRO A 206 LEU A 208 5 3 HELIX 14 14 GLU B 11 GLY B 28 1 18 HELIX 15 15 THR B 33 GLY B 42 1 10 HELIX 16 16 THR B 44 PHE B 52 1 9 HELIX 17 17 ASN B 54 SER B 65 1 12 HELIX 18 18 HIS B 70 GLU B 78 1 9 HELIX 19 19 ASP B 84 ASP B 103 1 20 HELIX 20 20 ASP B 103 LYS B 116 1 14 HELIX 21 21 THR B 120 ASP B 122 5 3 HELIX 22 22 MET B 123 ARG B 150 1 28 HELIX 23 23 ASP B 159 LEU B 181 1 23 HELIX 24 24 PRO B 182 VAL B 185 5 4 HELIX 25 25 ASP B 190 SER B 205 1 16 HELIX 26 26 PRO B 206 LEU B 208 5 3 SITE 1 AC1 13 LEU A 92 ASN A 110 HIS A 114 CYS A 137 SITE 2 AC1 13 ILE A 141 MET A 167 VAL A 171 ILE A 175 SITE 3 AC1 13 HOH A2078 HOH A2103 HOH A2105 HOH A2106 SITE 4 AC1 13 HOH A2107 SITE 1 AC2 10 MET B 89 LEU B 92 ASN B 110 HIS B 114 SITE 2 AC2 10 ILE B 141 MET B 167 VAL B 171 ASP B 172 SITE 3 AC2 10 ILE B 175 HOH B2084 CRYST1 46.650 231.881 44.330 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021436 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022558 0.00000