HEADER TRANSCRIPTION 29-MAR-07 2UXU TITLE TTGR IN COMPLEX WITH NARINGENIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRANSCRIPTIONAL REPRESSOR, TOLUENE EFFLUX PUMP COMPND 5 TTGABC OPERON REPRESSOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 STRAIN: DOT-T1E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS REPRESSOR PROTEIN, TRANSCRIPTION REGULATION, MULTIDRUG KEYWDS 2 BINDING PROTEIN, TRANSCRIPTIONAL REGULATOR OF EFFLUX KEYWDS 3 PUMPS, REPRESSOR, TETR FAMILY, DNA-BINDING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.ALGUEL,C.MENG,W.TERAN,T.KRELL,J.L.RAMOS,M.-T.GALLEGOS, AUTHOR 2 X.ZHANG REVDAT 3 24-FEB-09 2UXU 1 VERSN REVDAT 2 22-MAY-07 2UXU 1 JRNL REVDAT 1 08-MAY-07 2UXU 0 JRNL AUTH Y.ALGUEL,C.MENG,W.TERAN,T.KRELL,J.L.RAMOS, JRNL AUTH 2 M.-T.GALLEGOS,X.ZHANG JRNL TITL CRYSTAL STRUCTURES OF MULTIDRUG BINDING PROTEIN JRNL TITL 2 TTGR IN COMPLEX WITH ANTIBIOTICS AND PLANT JRNL TITL 3 ANTIMICROBIALS. JRNL REF J.MOL.BIOL. V. 369 829 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17466326 JRNL DOI 10.1016/J.JMB.2007.03.062 REMARK 2 REMARK 2 RESOLUTION. 2.3 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.87 REMARK 3 NUMBER OF REFLECTIONS : 16994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.24285 REMARK 3 FREE R VALUE : 0.29090 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.5 REMARK 3 FREE R VALUE TEST SET COUNT : 1374 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.3 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 45.63 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 656 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3122 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.679 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.98 REMARK 3 B22 (A**2) : -3.65 REMARK 3 B33 (A**2) : -2.34 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.0017 REMARK 3 BOND ANGLES (DEGREES) : 1.079 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : MASK REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : WATER.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2UXU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAR-07. REMARK 100 THE PDBE ID CODE IS EBI-32119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9333 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18368 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 73.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.1 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M BIS-TRIS PH REMARK 280 6.5, 15%(V/V) PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.32000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 115.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 115.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 THR B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 5 OG1 CG2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 GLN A 10 CG CD OE1 NE2 REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 27 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 LEU A 40 CG CD1 CD2 REMARK 470 THR A 44 OG1 CG2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LEU A 63 CG CD1 CD2 REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 GLN B 10 CG CD OE1 NE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 ARG B 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 ARG B 27 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 ARG B 75 CG CD NE CZ NH1 NH2 REMARK 470 SER B 79 OG REMARK 470 ASP B 81 CG OD1 OD2 REMARK 470 MET B 123 CG SD CE REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 ARG B 151 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 154 CG CD1 CD2 REMARK 470 GLU B 161 CG CD OE1 OE2 REMARK 470 LYS B 193 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 REMARK 500 OE1 GLU B 39 NH1 ARG B 45 2555 2.17 REMARK 500 NH1 ARG B 45 OE1 GLU B 39 2555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 52 CB - CA - C ANGL. DEV. = -13.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 6 -51.22 -12.77 REMARK 500 ALA A 47 -72.89 -40.69 REMARK 500 ASN A 54 -129.98 -134.94 REMARK 500 LYS A 55 -42.25 -145.15 REMARK 500 ASP A 121 -5.18 -51.47 REMARK 500 MET A 123 -71.79 -126.33 REMARK 500 CYS A 124 -40.51 100.30 REMARK 500 GLU B 7 37.84 29.28 REMARK 500 ALA B 9 32.06 -156.03 REMARK 500 ASN B 54 172.19 179.15 REMARK 500 ASP B 71 -52.61 -17.79 REMARK 500 GLU B 78 30.62 -95.24 REMARK 500 ASP B 84 64.25 -151.12 REMARK 500 ASP B 121 13.60 -68.46 REMARK 500 MET B 123 86.83 -166.34 REMARK 500 ARG B 150 49.00 -78.47 REMARK 500 LEU B 154 97.09 -163.42 REMARK 500 ASP B 183 28.27 -78.04 REMARK 500 ASP B 186 73.02 -63.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 53 ASN A 54 -145.01 REMARK 500 ALA B 9 GLN B 10 147.58 REMARK 500 ASP B 122 MET B 123 147.29 REMARK 500 GLN B 153 LEU B 154 -149.36 REMARK 500 LEU B 158 ASP B 159 147.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 151 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU B 157 19.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAR A1211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAR B1211 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2UXH RELATED DB: PDB REMARK 900 TTGR IN COMPLEX WITH QUERCETIN REMARK 900 RELATED ID: 2UXI RELATED DB: PDB REMARK 900 PHLORETIN IN COMPLEX WITH TTGR DBREF 2UXU A 1 210 UNP Q9AIU0 TTGR_PSEPU 1 210 DBREF 2UXU B 1 210 UNP Q9AIU0 TTGR_PSEPU 1 210 SEQRES 1 A 210 MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR ARG SEQRES 2 A 210 ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR LYS SEQRES 3 A 210 ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA GLU SEQRES 4 A 210 LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS PHE SEQRES 5 A 210 ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SER SEQRES 6 A 210 LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER GLU SEQRES 7 A 210 SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG LYS SEQRES 8 A 210 LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP ALA SEQRES 9 A 210 ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS CYS SEQRES 10 A 210 GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN ARG SEQRES 11 A 210 GLN SER ALA VAL LEU ASP CYS HIS LYS GLY ILE THR LEU SEQRES 12 A 210 ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO GLY SEQRES 13 A 210 GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA MET PHE ALA SEQRES 14 A 210 TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU PRO SEQRES 15 A 210 ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP VAL SEQRES 16 A 210 ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA LEU SEQRES 17 A 210 ARG LYS SEQRES 1 B 210 MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR ARG SEQRES 2 B 210 ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR LYS SEQRES 3 B 210 ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA GLU SEQRES 4 B 210 LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS PHE SEQRES 5 B 210 ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SER SEQRES 6 B 210 LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER GLU SEQRES 7 B 210 SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG LYS SEQRES 8 B 210 LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP ALA SEQRES 9 B 210 ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS CYS SEQRES 10 B 210 GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN ARG SEQRES 11 B 210 GLN SER ALA VAL LEU ASP CYS HIS LYS GLY ILE THR LEU SEQRES 12 B 210 ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO GLY SEQRES 13 B 210 GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA MET PHE ALA SEQRES 14 B 210 TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU PRO SEQRES 15 B 210 ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP VAL SEQRES 16 B 210 ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA LEU SEQRES 17 B 210 ARG LYS HET NAR A1211 20 HET NAR B1211 20 HETNAM NAR NARINGENIN FORMUL 3 NAR 2(C15 H12 O5) FORMUL 5 HOH *115(H2 O1) HELIX 1 1 THR A 5 GLY A 28 1 24 HELIX 2 2 THR A 33 GLY A 42 1 10 HELIX 3 3 THR A 44 PHE A 52 1 9 HELIX 4 4 LYS A 55 LEU A 66 1 12 HELIX 5 5 HIS A 67 THR A 69 5 3 HELIX 6 6 HIS A 70 SER A 79 1 10 HELIX 7 7 ASP A 84 ASP A 103 1 20 HELIX 8 8 ASP A 103 LYS A 116 1 14 HELIX 9 9 CYS A 124 ARG A 151 1 28 HELIX 10 10 ASP A 159 LEU A 181 1 23 HELIX 11 11 PRO A 182 VAL A 185 5 4 HELIX 12 12 ASP A 190 SER A 205 1 16 HELIX 13 13 ALA B 9 GLY B 28 1 20 HELIX 14 14 THR B 33 GLY B 42 1 10 HELIX 15 15 THR B 44 PHE B 52 1 9 HELIX 16 16 ASN B 54 LEU B 66 1 13 HELIX 17 17 HIS B 70 GLU B 78 1 9 HELIX 18 18 ASP B 84 ASP B 103 1 20 HELIX 19 19 ASP B 103 LYS B 116 1 14 HELIX 20 20 CYS B 124 ARG B 150 1 27 HELIX 21 21 ASP B 159 LEU B 181 1 23 HELIX 22 22 PRO B 182 VAL B 185 5 4 HELIX 23 23 ASP B 190 SER B 205 1 16 SITE 1 AC1 12 LEU A 93 VAL A 96 ASN A 110 ILE A 141 SITE 2 AC1 12 MET A 167 ILE A 175 HOH A2008 HOH A2018 SITE 3 AC1 12 HOH A2019 HOH A2023 HOH A2060 HOH A2061 SITE 1 AC2 12 LEU B 66 VAL B 96 ASN B 110 ILE B 141 SITE 2 AC2 12 MET B 167 PHE B 168 VAL B 171 ILE B 175 SITE 3 AC2 12 HOH B2018 HOH B2030 HOH B2053 HOH B2054 CRYST1 46.640 230.650 43.966 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021441 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004336 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022745 0.00000