HEADER OXIDOREDUCTASE 14-JUN-07 2V3A TITLE CRYSTAL STRUCTURE OF RUBREDOXIN REDUCTASE FROM PSEUDOMONAS AERUGINOSA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUBREDOXIN REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALKANE DEGRADATION, NADH OXIDOREDUCTASE, RUBREDOXIN REDUCTASE, FAD, KEYWDS 2 NAD, FLAVOPROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.HAGELUEKEN,L.WIEHLMANN,T.M.ADAMS,H.KOLMAR,D.W.HEINZ,B.TUEMMLER,W.- AUTHOR 2 D.SCHUBERT REVDAT 4 13-DEC-23 2V3A 1 REMARK REVDAT 3 13-JUL-11 2V3A 1 VERSN REVDAT 2 24-FEB-09 2V3A 1 VERSN REVDAT 1 14-AUG-07 2V3A 0 JRNL AUTH G.HAGELUEKEN,L.WIEHLMANN,T.M.ADAMS,H.KOLMAR,D.W.HEINZ, JRNL AUTH 2 B.TUEMMLER,W.-D.SCHUBERT JRNL TITL CRYSTAL STRUCTURE OF THE ELECTRON TRANSFER COMPLEX JRNL TITL 2 RUBREDOXIN - RUBREDOXIN REDUCTASE FROM PSEUDOMONAS JRNL TITL 3 AERUGINOSA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 12276 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17636129 JRNL DOI 10.1073/PNAS.0702919104 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 103.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 25303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1333 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1803 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2824 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 97 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.47000 REMARK 3 B22 (A**2) : -0.47000 REMARK 3 B33 (A**2) : 0.70000 REMARK 3 B12 (A**2) : -0.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.214 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.244 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3148 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4295 ; 1.493 ; 2.014 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 421 ; 6.003 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;34.928 ;22.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 511 ;14.987 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;21.153 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 477 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2397 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1371 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2059 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 260 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 67 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2026 ; 0.708 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3154 ; 1.079 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1305 ; 1.887 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1126 ; 2.896 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 83.2847 29.6054 24.8718 REMARK 3 T TENSOR REMARK 3 T11: -0.1395 T22: -0.1078 REMARK 3 T33: -0.0911 T12: -0.0169 REMARK 3 T13: 0.0717 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 1.5729 L22: 2.0179 REMARK 3 L33: 2.1589 L12: -0.1756 REMARK 3 L13: 0.4637 L23: 0.3906 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: -0.1072 S13: -0.1968 REMARK 3 S21: 0.1213 S22: 0.0310 S23: 0.0434 REMARK 3 S31: 0.2540 S32: -0.0323 S33: 0.0045 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 79.1395 28.1421 -2.5754 REMARK 3 T TENSOR REMARK 3 T11: -0.0764 T22: -0.1107 REMARK 3 T33: -0.0766 T12: -0.0141 REMARK 3 T13: -0.0004 T23: -0.0597 REMARK 3 L TENSOR REMARK 3 L11: 1.3739 L22: 1.6198 REMARK 3 L33: 2.4947 L12: -0.9786 REMARK 3 L13: 0.5631 L23: 0.0517 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: -0.0078 S13: -0.2829 REMARK 3 S21: -0.1683 S22: -0.0199 S23: 0.1833 REMARK 3 S31: 0.2321 S32: -0.0861 S33: 0.0078 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 91.3952 42.2053 22.9130 REMARK 3 T TENSOR REMARK 3 T11: -0.1644 T22: -0.1206 REMARK 3 T33: -0.1292 T12: -0.0170 REMARK 3 T13: 0.0204 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.9388 L22: 2.0051 REMARK 3 L33: 1.8500 L12: -0.6316 REMARK 3 L13: -0.2535 L23: 0.3071 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: -0.1191 S13: 0.1235 REMARK 3 S21: 0.0058 S22: 0.0464 S23: -0.2264 REMARK 3 S31: -0.0894 S32: 0.1955 S33: -0.0297 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 311 A 384 REMARK 3 ORIGIN FOR THE GROUP (A): 104.0910 37.7258 0.9397 REMARK 3 T TENSOR REMARK 3 T11: -0.0771 T22: -0.0141 REMARK 3 T33: -0.0217 T12: 0.0171 REMARK 3 T13: 0.0777 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.6774 L22: 1.6911 REMARK 3 L33: 2.7640 L12: 1.3784 REMARK 3 L13: -0.3159 L23: -0.2794 REMARK 3 S TENSOR REMARK 3 S11: 0.0365 S12: 0.1877 S13: 0.1856 REMARK 3 S21: -0.3464 S22: -0.0064 S23: -0.1365 REMARK 3 S31: -0.2700 S32: 0.2462 S33: -0.0301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2V3A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1290032921. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.981 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25303 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XHC REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 1000, 40% PEG 300, TRIS-CL PH REMARK 280 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.68800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.37600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 79.03200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 131.72000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.34400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.68800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 105.37600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 131.72000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 79.03200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.34400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 125 46.74 -88.14 REMARK 500 ARG A 146 -36.64 -133.80 REMARK 500 ASN A 256 -106.24 -137.81 REMARK 500 CYS A 324 86.22 -152.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1385 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1386 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1387 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1388 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1389 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1392 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A1393 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V3B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ELECTRON TRANSFER COMPLEX RUBREDOXIN - REMARK 900 RUBREDOXIN REDUCTASE FROM PSEUDOMONAS AERUGINOSA. DBREF 2V3A A 1 384 UNP Q9HTK9 Q9HTK9_PSEAE 1 384 SEQRES 1 A 384 MET SER GLU ARG ALA PRO LEU VAL ILE ILE GLY THR GLY SEQRES 2 A 384 LEU ALA GLY TYR ASN LEU ALA ARG GLU TRP ARG LYS LEU SEQRES 3 A 384 ASP GLY GLU THR PRO LEU LEU MET ILE THR ALA ASP ASP SEQRES 4 A 384 GLY ARG SER TYR SER LYS PRO MET LEU SER THR GLY PHE SEQRES 5 A 384 SER LYS ASN LYS ASP ALA ASP GLY LEU ALA MET ALA GLU SEQRES 6 A 384 PRO GLY ALA MET ALA GLU GLN LEU ASN ALA ARG ILE LEU SEQRES 7 A 384 THR HIS THR ARG VAL THR GLY ILE ASP PRO GLY HIS GLN SEQRES 8 A 384 ARG ILE TRP ILE GLY GLU GLU GLU VAL ARG TYR ARG ASP SEQRES 9 A 384 LEU VAL LEU ALA TRP GLY ALA GLU PRO ILE ARG VAL PRO SEQRES 10 A 384 VAL GLU GLY ASP ALA GLN ASP ALA LEU TYR PRO ILE ASN SEQRES 11 A 384 ASP LEU GLU ASP TYR ALA ARG PHE ARG GLN ALA ALA ALA SEQRES 12 A 384 GLY LYS ARG ARG VAL LEU LEU LEU GLY ALA GLY LEU ILE SEQRES 13 A 384 GLY CYS GLU PHE ALA ASN ASP LEU SER SER GLY GLY TYR SEQRES 14 A 384 GLN LEU ASP VAL VAL ALA PRO CYS GLU GLN VAL MET PRO SEQRES 15 A 384 GLY LEU LEU HIS PRO ALA ALA ALA LYS ALA VAL GLN ALA SEQRES 16 A 384 GLY LEU GLU GLY LEU GLY VAL ARG PHE HIS LEU GLY PRO SEQRES 17 A 384 VAL LEU ALA SER LEU LYS LYS ALA GLY GLU GLY LEU GLU SEQRES 18 A 384 ALA HIS LEU SER ASP GLY GLU VAL ILE PRO CYS ASP LEU SEQRES 19 A 384 VAL VAL SER ALA VAL GLY LEU ARG PRO ARG THR GLU LEU SEQRES 20 A 384 ALA PHE ALA ALA GLY LEU ALA VAL ASN ARG GLY ILE VAL SEQRES 21 A 384 VAL ASP ARG SER LEU ARG THR SER HIS ALA ASN ILE TYR SEQRES 22 A 384 ALA LEU GLY ASP CYS ALA GLU VAL ASP GLY LEU ASN LEU SEQRES 23 A 384 LEU TYR VAL MET PRO LEU MET ALA CYS ALA ARG ALA LEU SEQRES 24 A 384 ALA GLN THR LEU ALA GLY ASN PRO SER GLN VAL ALA TYR SEQRES 25 A 384 GLY PRO MET PRO VAL THR VAL LYS THR PRO ALA CYS PRO SEQRES 26 A 384 LEU VAL VAL SER PRO PRO PRO ARG GLY MET ASP GLY GLN SEQRES 27 A 384 TRP LEU VAL GLU GLY SER GLY THR ASP LEU LYS VAL LEU SEQRES 28 A 384 CYS ARG ASP THR ALA GLY ARG VAL ILE GLY TYR ALA LEU SEQRES 29 A 384 THR GLY ALA ALA VAL ASN GLU LYS LEU ALA LEU ASN LYS SEQRES 30 A 384 GLU LEU PRO GLY LEU MET ALA HET PEG A1385 7 HET PEG A1386 7 HET PEG A1387 7 HET PEG A1388 7 HET PEG A1389 7 HET PEG A1390 7 HET CL A1391 1 HET CL A1392 1 HET FAD A1393 53 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 PEG 6(C4 H10 O3) FORMUL 8 CL 2(CL 1-) FORMUL 10 FAD C27 H33 N9 O15 P2 FORMUL 11 HOH *231(H2 O) HELIX 1 1 GLY A 13 LYS A 25 1 13 HELIX 2 2 LYS A 45 GLY A 51 5 7 HELIX 3 3 ASP A 57 LEU A 61 1 5 HELIX 4 4 GLU A 65 LEU A 73 1 9 HELIX 5 5 PRO A 88 HIS A 90 5 3 HELIX 6 6 ASP A 131 ALA A 143 1 13 HELIX 7 7 GLY A 154 GLY A 167 1 14 HELIX 8 8 HIS A 186 GLY A 199 1 14 HELIX 9 9 THR A 245 ALA A 251 1 7 HELIX 10 10 TYR A 288 ALA A 304 1 17 HELIX 11 11 ALA A 367 ASN A 370 5 4 HELIX 12 12 GLU A 371 LYS A 377 1 7 SHEET 1 AA 5 ARG A 76 LEU A 78 0 SHEET 2 AA 5 LEU A 32 ILE A 35 1 O LEU A 32 N ARG A 76 SHEET 3 AA 5 LEU A 7 ILE A 10 1 O LEU A 7 N LEU A 33 SHEET 4 AA 5 ASP A 104 LEU A 107 1 O ASP A 104 N VAL A 8 SHEET 5 AA 5 ILE A 272 ALA A 274 1 O TYR A 273 N LEU A 107 SHEET 1 AB 2 SER A 42 TYR A 43 0 SHEET 2 AB 2 ALA A 62 ALA A 64 -1 N MET A 63 O SER A 42 SHEET 1 AC 3 GLY A 85 ASP A 87 0 SHEET 2 AC 3 ARG A 92 ILE A 95 -1 O ARG A 92 N ASP A 87 SHEET 3 AC 3 GLU A 98 ARG A 101 -1 O GLU A 98 N ILE A 95 SHEET 1 AD 2 ALA A 111 PRO A 113 0 SHEET 2 AD 2 LEU A 241 PRO A 243 -1 O ARG A 242 N GLU A 112 SHEET 1 AE 5 LEU A 126 PRO A 128 0 SHEET 2 AE 5 LEU A 234 SER A 237 1 O VAL A 235 N TYR A 127 SHEET 3 AE 5 ARG A 147 LEU A 151 1 O LEU A 149 N VAL A 236 SHEET 4 AE 5 GLN A 170 ALA A 175 1 O GLN A 170 N VAL A 148 SHEET 5 AE 5 ARG A 203 LEU A 206 1 O ARG A 203 N VAL A 173 SHEET 1 AF 3 LEU A 210 ALA A 216 0 SHEET 2 AF 3 GLY A 219 LEU A 224 -1 O GLY A 219 N ALA A 216 SHEET 3 AF 3 VAL A 229 CYS A 232 -1 O ILE A 230 N ALA A 222 SHEET 1 AG 2 ILE A 259 VAL A 261 0 SHEET 2 AG 2 ALA A 279 VAL A 281 1 O GLU A 280 N VAL A 261 SHEET 1 AH 5 VAL A 317 VAL A 319 0 SHEET 2 AH 5 LEU A 326 SER A 329 -1 O LEU A 326 N VAL A 319 SHEET 3 AH 5 VAL A 359 THR A 365 -1 O TYR A 362 N SER A 329 SHEET 4 AH 5 ASP A 347 ARG A 353 -1 O LEU A 348 N THR A 365 SHEET 5 AH 5 GLN A 338 SER A 344 -1 O GLN A 338 N ARG A 353 SITE 1 AC1 4 LEU A 184 VAL A 317 HOH A2218 HOH A2219 SITE 1 AC2 3 MET A 290 PRO A 314 ASN A 376 SITE 1 AC3 5 GLY A 183 LEU A 184 LEU A 185 HIS A 186 SITE 2 AC3 5 TRP A 339 SITE 1 AC4 5 SER A 264 ARG A 266 PRO A 307 GLN A 309 SITE 2 AC4 5 HOH A2220 SITE 1 AC5 2 ARG A 82 ARG A 244 SITE 1 AC6 7 ARG A 82 VAL A 83 ARG A 115 PRO A 117 SITE 2 AC6 7 GLU A 246 LEU A 247 HOH A2221 SITE 1 AC7 3 LEU A 155 ILE A 156 HOH A2130 SITE 1 AC8 4 ARG A 242 THR A 245 GLU A 246 ARG A 257 SITE 1 AC9 39 ILE A 10 GLY A 11 THR A 12 GLY A 13 SITE 2 AC9 39 LEU A 14 ALA A 15 THR A 36 ALA A 37 SITE 3 AC9 39 ASP A 38 LYS A 45 PRO A 46 THR A 81 SITE 4 AC9 39 ARG A 82 VAL A 83 ALA A 108 TRP A 109 SITE 5 AC9 39 GLY A 110 ILE A 156 GLU A 159 PHE A 160 SITE 6 AC9 39 GLY A 276 ASP A 277 LEU A 287 TYR A 288 SITE 7 AC9 39 VAL A 289 LEU A 292 LYS A 320 HOH A2022 SITE 8 AC9 39 HOH A2091 HOH A2156 HOH A2222 HOH A2223 SITE 9 AC9 39 HOH A2224 HOH A2226 HOH A2227 HOH A2228 SITE 10 AC9 39 HOH A2229 HOH A2230 HOH A2231 CRYST1 119.602 119.602 158.064 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008361 0.004827 0.000000 0.00000 SCALE2 0.000000 0.009655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006327 0.00000