HEADER ISOMERASE 19-JUL-07 2V6K TITLE STRUCTURE OF MALEYL PYRUVATE ISOMERASE, A BACTERIAL GLUTATHIONE-S- TITLE 2 TRANSFERASE IN ZETA CLASS, IN COMPLEX WITH SUBSTRATE ANALOGUE TITLE 3 DICARBOXYETHYL GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALEYLPYRUVATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MALEYL PYRUVATE ISOMERASE; COMPND 5 EC: 5.2.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SP.; SOURCE 3 ORGANISM_TAXID: 70356; SOURCE 4 STRAIN: U2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET 28 KEYWDS GLUTATHIONE-S-TRANSFERASE, GST, PLASMID, PYRUVATE, BACTERIAL, KEYWDS 2 ISOMERASE, BIODEGRADATION, MALEYL PYRUVATE, FUMARYL PYRUVATE EXPDTA X-RAY DIFFRACTION AUTHOR D.K.SHOEMARK,N.-Y.ZHOU,P.A.WILLIAMS,A.T.HADFIELD REVDAT 5 13-DEC-23 2V6K 1 LINK REVDAT 4 24-JAN-18 2V6K 1 SOURCE REVDAT 3 24-FEB-09 2V6K 1 VERSN REVDAT 2 11-NOV-08 2V6K 1 AUTHOR JRNL REVDAT 1 22-JUL-08 2V6K 0 JRNL AUTH M.MARSH,D.K.SHOEMARK,A.JACOB,C.ROBINSON,B.CAHILL,N.-Y.ZHOU, JRNL AUTH 2 P.A.WILLIAMS,A.T.HADFIELD JRNL TITL STRUCTURE OF BACTERIAL GLUTATHIONE-S-TRANSFERASE MALEYL JRNL TITL 2 PYRUVATE ISOMERASE AND IMPLICATIONS FOR MECHANISM OF JRNL TITL 3 ISOMERISATION. JRNL REF J.MOL.BIOL. V. 384 165 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18824004 JRNL DOI 10.1016/J.JMB.2008.09.028 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.L.FUENMAYOR,M.WILD,P.A.WILLIAMS REMARK 1 TITL A GENE CLUSTER ENCODING STEPS IN CONVERSION OF NAPHTHALENE REMARK 1 TITL 2 TO GENTISATE IN PSEUDOMONAS SP. STRAIN U2 REMARK 1 REF J.BACTERIOL. V. 9 2522 1998 REMARK 1 REFN ISSN 0021-9193 REMARK 1 PMID 9573207 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 106788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5652 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 210 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3350 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 717 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.044 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.035 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3553 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4848 ; 1.192 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 440 ; 4.613 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 167 ;34.522 ;22.814 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 551 ;11.040 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;18.787 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 530 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2786 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1847 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2469 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 606 ; 0.101 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 32 ; 0.153 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 53 ; 0.110 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2176 ; 0.791 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3486 ; 1.434 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1435 ; 2.190 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1354 ; 3.346 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2V6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1290033176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 394142 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 27.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 11.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2C1R REMARK 200 REMARK 200 REMARK: DATA WERE 99 PERCENT COMPLETE TO 1.5 A. THE MODEL WAS REMARK 200 REFINED AGAINST DATA TO 1.3 A RESOLUTION, 44 PERCENT COMPLETE IN REMARK 200 THE OUTER SHELL. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOTHER LIQOUR: RESERVOIR SOLUTION: REMARK 280 DROP: 1 UL MOTHERLIQUOR, I UL RESERVOIR, 1 UL BENZAMIDINE, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.17000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2194 O HOH B 2343 1.91 REMARK 500 O HOH B 2285 O HOH B 2343 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 96.60 73.61 REMARK 500 ILE A 103 -66.40 -123.62 REMARK 500 GLN B 64 97.32 72.62 REMARK 500 ILE B 103 -67.47 -125.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2005 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A2022 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A2031 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH A2098 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH A2109 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A2183 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH B2001 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B2005 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH B2022 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH B2026 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B2029 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH B2030 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B2036 DISTANCE = 6.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1214 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2133 O REMARK 620 2 HOH B2309 O 122.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TGG A1213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TGG B1213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B1214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A1215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B1215 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL LYSINE VISIBLE WHICH COMES FROM HIS-TAG DBREF 2V6K A -1 0 PDB 2V6K 2V6K -1 0 DBREF 2V6K A 1 212 UNP O86043 O86043_9RALS 1 212 DBREF 2V6K B -1 0 PDB 2V6K 2V6K -1 0 DBREF 2V6K B 1 212 UNP O86043 O86043_9RALS 1 212 SEQRES 1 A 214 ALA LYS MET LYS LEU TYR ASN PHE TRP ARG SER GLY THR SEQRES 2 A 214 SER HIS ARG LEU ARG ILE ALA LEU ASN LEU LYS GLY VAL SEQRES 3 A 214 PRO TYR GLU TYR LEU ALA VAL HIS LEU GLY LYS GLU GLU SEQRES 4 A 214 HIS LEU LYS ASP ALA PHE LYS ALA LEU ASN PRO GLN GLN SEQRES 5 A 214 LEU VAL PRO ALA LEU ASP THR GLY ALA GLN VAL LEU ILE SEQRES 6 A 214 GLN SER PRO ALA ILE ILE GLU TRP LEU GLU GLU GLN TYR SEQRES 7 A 214 PRO THR PRO ALA LEU LEU PRO ALA ASP ALA ASP GLY ARG SEQRES 8 A 214 GLN ARG VAL ARG ALA LEU ALA ALA ILE VAL GLY CYS ASP SEQRES 9 A 214 ILE HIS PRO ILE ASN ASN ARG ARG ILE LEU GLU TYR LEU SEQRES 10 A 214 ARG LYS THR PHE GLY ALA ASP GLU ALA ALA ILE ASN ALA SEQRES 11 A 214 TRP CYS GLY THR TRP ILE SER ALA GLY PHE ASP ALA TYR SEQRES 12 A 214 GLU ALA LEU LEU ALA VAL ASP PRO LYS ARG GLY ARG TYR SEQRES 13 A 214 SER PHE GLY ASP THR PRO THR LEU ALA ASP CYS TYR LEU SEQRES 14 A 214 VAL PRO GLN VAL GLU SER ALA ARG ARG PHE GLN VAL ASP SEQRES 15 A 214 LEU THR PRO TYR PRO LEU ILE ARG ALA VAL ASP ALA ALA SEQRES 16 A 214 CYS GLY GLU LEU ASP ALA PHE ARG ARG ALA ALA PRO ALA SEQRES 17 A 214 ALA GLN PRO ASP SER ALA SEQRES 1 B 214 ALA LYS MET LYS LEU TYR ASN PHE TRP ARG SER GLY THR SEQRES 2 B 214 SER HIS ARG LEU ARG ILE ALA LEU ASN LEU LYS GLY VAL SEQRES 3 B 214 PRO TYR GLU TYR LEU ALA VAL HIS LEU GLY LYS GLU GLU SEQRES 4 B 214 HIS LEU LYS ASP ALA PHE LYS ALA LEU ASN PRO GLN GLN SEQRES 5 B 214 LEU VAL PRO ALA LEU ASP THR GLY ALA GLN VAL LEU ILE SEQRES 6 B 214 GLN SER PRO ALA ILE ILE GLU TRP LEU GLU GLU GLN TYR SEQRES 7 B 214 PRO THR PRO ALA LEU LEU PRO ALA ASP ALA ASP GLY ARG SEQRES 8 B 214 GLN ARG VAL ARG ALA LEU ALA ALA ILE VAL GLY CYS ASP SEQRES 9 B 214 ILE HIS PRO ILE ASN ASN ARG ARG ILE LEU GLU TYR LEU SEQRES 10 B 214 ARG LYS THR PHE GLY ALA ASP GLU ALA ALA ILE ASN ALA SEQRES 11 B 214 TRP CYS GLY THR TRP ILE SER ALA GLY PHE ASP ALA TYR SEQRES 12 B 214 GLU ALA LEU LEU ALA VAL ASP PRO LYS ARG GLY ARG TYR SEQRES 13 B 214 SER PHE GLY ASP THR PRO THR LEU ALA ASP CYS TYR LEU SEQRES 14 B 214 VAL PRO GLN VAL GLU SER ALA ARG ARG PHE GLN VAL ASP SEQRES 15 B 214 LEU THR PRO TYR PRO LEU ILE ARG ALA VAL ASP ALA ALA SEQRES 16 B 214 CYS GLY GLU LEU ASP ALA PHE ARG ARG ALA ALA PRO ALA SEQRES 17 B 214 ALA GLN PRO ASP SER ALA HET TGG A1213 28 HET NA A1214 1 HET ACT A1215 4 HET TGG B1213 28 HET NA B1214 1 HET ACT B1215 4 HETNAM TGG GAMMA-GLUTAMYL-S-(1,2-DICARBOXYETHYL)CYSTEINYLGLYCINE HETNAM NA SODIUM ION HETNAM ACT ACETATE ION FORMUL 3 TGG 2(C14 H21 N3 O10 S) FORMUL 4 NA 2(NA 1+) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 9 HOH *717(H2 O) HELIX 1 1 SER A 9 GLY A 23 1 15 HELIX 2 2 GLU A 36 LEU A 39 5 4 HELIX 3 3 LYS A 40 ASN A 47 1 8 HELIX 4 4 GLN A 64 TYR A 76 1 13 HELIX 5 5 ASP A 85 ILE A 103 1 19 HELIX 6 6 HIS A 104 ASN A 107 5 4 HELIX 7 7 ASN A 108 GLY A 120 1 13 HELIX 8 8 ASP A 122 ASP A 148 1 27 HELIX 9 9 THR A 161 PHE A 177 1 17 HELIX 10 10 TYR A 184 GLY A 195 1 12 HELIX 11 11 LEU A 197 ALA A 204 1 8 HELIX 12 12 PRO A 205 GLN A 208 5 4 HELIX 13 13 SER B 9 GLY B 23 1 15 HELIX 14 14 GLU B 36 LEU B 39 5 4 HELIX 15 15 LYS B 40 ASN B 47 1 8 HELIX 16 16 GLN B 64 TYR B 76 1 13 HELIX 17 17 ASP B 85 ILE B 103 1 19 HELIX 18 18 HIS B 104 ASN B 107 5 4 HELIX 19 19 ASN B 108 GLY B 120 1 13 HELIX 20 20 ASP B 122 ASP B 148 1 27 HELIX 21 21 THR B 161 PHE B 177 1 17 HELIX 22 22 TYR B 184 GLU B 196 1 13 HELIX 23 23 LEU B 197 ALA B 204 1 8 HELIX 24 24 PRO B 205 GLN B 208 5 4 SHEET 1 AA 4 GLU A 27 ALA A 30 0 SHEET 2 AA 4 LYS A 2 ASN A 5 1 O LEU A 3 N LEU A 29 SHEET 3 AA 4 ALA A 54 ASP A 56 -1 O ALA A 54 N TYR A 4 SHEET 4 AA 4 VAL A 61 ILE A 63 -1 O LEU A 62 N LEU A 55 SHEET 1 BA 4 GLU B 27 ALA B 30 0 SHEET 2 BA 4 LYS B 2 ASN B 5 1 O LEU B 3 N LEU B 29 SHEET 3 BA 4 ALA B 54 ASP B 56 -1 O ALA B 54 N TYR B 4 SHEET 4 BA 4 VAL B 61 ILE B 63 -1 O LEU B 62 N LEU B 55 LINK NA NA A1214 O HOH A2139 1555 1555 2.40 LINK NA NA B1214 O HOH B2133 1555 1555 2.51 LINK NA NA B1214 O HOH B2309 1555 1555 2.58 CISPEP 1 VAL A 52 PRO A 53 0 1.67 CISPEP 2 THR A 78 PRO A 79 0 -5.59 CISPEP 3 VAL B 52 PRO B 53 0 2.41 CISPEP 4 THR B 78 PRO B 79 0 -6.06 SITE 1 AC1 27 SER A 9 GLY A 10 THR A 11 ARG A 14 SITE 2 AC1 27 LEU A 33 HIS A 38 LEU A 51 VAL A 52 SITE 3 AC1 27 GLN A 64 SER A 65 PRO A 66 HIS A 104 SITE 4 AC1 27 ASN A 108 ARG A 109 ARG A 110 ARG A 176 SITE 5 AC1 27 HOH A2010 HOH A2221 HOH A2360 HOH A2361 SITE 6 AC1 27 HOH A2362 HOH A2363 HOH A2364 HOH A2365 SITE 7 AC1 27 CYS B 101 ASP B 102 HOH B2190 SITE 1 AC2 29 CYS A 101 ASP A 102 HOH A2216 SER B 9 SITE 2 AC2 29 GLY B 10 THR B 11 ARG B 14 LEU B 33 SITE 3 AC2 29 HIS B 38 LEU B 51 VAL B 52 GLN B 64 SITE 4 AC2 29 SER B 65 PRO B 66 HIS B 104 ASN B 108 SITE 5 AC2 29 ARG B 109 ARG B 110 ARG B 176 HOH B2011 SITE 6 AC2 29 HOH B2194 HOH B2196 HOH B2285 HOH B2343 SITE 7 AC2 29 HOH B2344 HOH B2345 HOH B2346 HOH B2347 SITE 8 AC2 29 HOH B2348 SITE 1 AC3 4 ARG A 175 HOH A2139 HOH A2141 HOH A2325 SITE 1 AC4 4 ARG B 175 HOH B2133 HOH B2284 HOH B2309 SITE 1 AC5 5 ARG A 109 GLU A 113 ARG A 116 HOH A2366 SITE 2 AC5 5 HOH A2367 SITE 1 AC6 5 ARG B 109 GLU B 113 ARG B 116 HOH B2349 SITE 2 AC6 5 HOH B2350 CRYST1 52.659 60.340 81.680 90.00 93.22 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018990 0.000000 0.001068 0.00000 SCALE2 0.000000 0.016573 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012262 0.00000 MTRIX1 1 -0.993900 -0.000248 -0.109900 -0.11170 1 MTRIX2 1 0.000216 -1.000000 0.000295 58.78000 1 MTRIX3 1 -0.109900 0.000270 0.993900 -0.01509 1