HEADER HYDROLASE 09-AUG-07 2V8O TITLE STRUCTURE OF THE MURRAY VALLEY ENCEPHALITIS VIRUS RNA HELICASE TO 1. TITLE 2 9A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIVIRIN PROTEASE NS3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NS3 HELICASE DOMAIN, RESIDUES 1681-2122; COMPND 5 SYNONYM: NS3 HELICASE; COMPND 6 EC: 3.4.21.91; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURRAY VALLEY ENCEPHALITIS VIRUS; SOURCE 3 ORGANISM_TAXID: 11079; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS KEYWDS MURRAY VALLEY ENCEPHALITIS VIRUS, GLYCOPROTEIN, VIRAL ENZYMES, KEYWDS 2 TRANSMEMBRANE, CLEAVAGE ON PAIR OF BASIC RESIDUES, ATP-BINDING, KEYWDS 3 TRANSFERASE, FLAVIVIRIDAE, CORE PROTEIN, VIRION, MEMBRANE, HELICASE, KEYWDS 4 HYDROLASE, HELICASES, CAPSID PROTEIN, RNA REPLICATION, ENVELOPE KEYWDS 5 PROTEIN, NUCLEOTIDE-BINDING, NUCLEOTIDYLTRANSFERASE, RNA-DIRECTED KEYWDS 6 RNA POLYMERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.J.MANCINI,R.ASSENBERG,A.VERMA,T.S.WALTER,R.TUMA,J.M.GRIMES, AUTHOR 2 R.J.OWENS,D.I.STUART REVDAT 7 13-DEC-23 2V8O 1 REMARK REVDAT 6 03-APR-19 2V8O 1 SOURCE REVDAT 5 12-JUL-17 2V8O 1 REVDAT 4 13-JUL-11 2V8O 1 VERSN REVDAT 3 24-FEB-09 2V8O 1 VERSN REVDAT 2 09-OCT-07 2V8O 1 JRNL REVDAT 1 21-AUG-07 2V8O 0 JRNL AUTH E.J.MANCINI,R.ASSENBERG,A.VERMA,T.S.WALTER,R.TUMA, JRNL AUTH 2 J.M.GRIMES,R.J.OWENS,D.I.STUART JRNL TITL STRUCTURE OF THE MURRAY VALLEY ENCEPHALITIS VIRUS RNA JRNL TITL 2 HELICASE AT 1.9 A RESOLUTION. JRNL REF PROTEIN SCI. V. 16 2294 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17893366 JRNL DOI 10.1110/PS.072843107 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1789 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2456 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3383 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 284 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.389 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3460 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2398 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4693 ; 1.219 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5806 ; 0.870 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 426 ; 6.465 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 161 ;35.356 ;23.168 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 582 ;12.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;12.108 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 511 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3853 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 714 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 726 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2575 ; 0.198 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1678 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1774 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 242 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.224 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 24 ; 0.217 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.144 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2773 ; 3.711 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 861 ; 1.166 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3450 ; 4.048 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1554 ; 4.104 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1243 ; 5.458 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 550 REMARK 3 ORIGIN FOR THE GROUP (A): 32.4150 -1.2960 16.2150 REMARK 3 T TENSOR REMARK 3 T11: -0.0405 T22: -0.0311 REMARK 3 T33: -0.0661 T12: -0.0443 REMARK 3 T13: 0.0030 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.5793 L22: 2.4645 REMARK 3 L33: 0.8879 L12: -0.5464 REMARK 3 L13: 0.0405 L23: 0.0255 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: -0.1085 S13: -0.0298 REMARK 3 S21: 0.3374 S22: 0.0153 S23: 0.1246 REMARK 3 S31: 0.0880 S32: -0.0310 S33: 0.0098 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 551 A 618 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9720 4.0230 41.0400 REMARK 3 T TENSOR REMARK 3 T11: 0.1875 T22: 0.1393 REMARK 3 T33: -0.0217 T12: 0.0376 REMARK 3 T13: 0.1707 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.8727 L22: 3.1075 REMARK 3 L33: 14.0943 L12: -0.5000 REMARK 3 L13: -3.4285 L23: 0.6359 REMARK 3 S TENSOR REMARK 3 S11: 0.1864 S12: -0.6960 S13: -0.3108 REMARK 3 S21: 0.4930 S22: 0.2023 S23: 0.4217 REMARK 3 S31: -0.4317 S32: -0.9622 S33: -0.3887 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2V8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1290033426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0720 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36088 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CASPR REMARK 200 STARTING MODEL: PDB ENTRY 2BMF REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG6000, 0.1M HEPES PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.20700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 247 REMARK 465 VAL A 248 REMARK 465 GLN A 249 REMARK 465 ILE A 582 REMARK 465 ILE A 583 REMARK 465 THR A 584 REMARK 465 ARG A 585 REMARK 465 ILE A 586 REMARK 465 GLY A 587 REMARK 465 GLU A 588 REMARK 465 ARG A 589 REMARK 465 LYS A 590 REMARK 465 VAL A 591 REMARK 465 LEU A 592 REMARK 465 ARG A 619 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 187 -5.26 82.06 REMARK 500 PRO A 196 153.41 -46.61 REMARK 500 ARG A 203 -50.16 -127.66 REMARK 500 LEU A 244 55.89 -102.53 REMARK 500 ASP A 436 53.09 -151.30 REMARK 500 GLU A 437 62.80 67.20 REMARK 500 PRO A 502 -84.93 -37.58 REMARK 500 ASN A 503 75.12 -112.39 REMARK 500 TYR A 518 139.72 171.73 REMARK 500 ASN A 578 -91.21 -91.70 REMARK 500 GLU A 579 -163.14 -110.43 REMARK 500 ALA A 616 -106.29 -71.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 436 GLU A 437 33.92 REMARK 500 LYS A 593 PRO A 594 -37.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PROTEIN UNDER STUDY IS THE NS3 HELICASE DOMAIN OF THE REMARK 999 BIFUNCTIONAL NS3 PROTEASE-HELICASE (NP_722535) PROTEIN OF REMARK 999 MURRAY VALLEY ENCEPHALITIS VIRUS REMARK 999 N-TERMINAL RESIDUES GLY, PRO ARE CLONING PRODUCTS. DBREF 2V8O A 176 177 PDB 2V8O 2V8O 176 177 DBREF 2V8O A 178 619 UNP P05769 POLG_MVEV5 1681 2122 SEQRES 1 A 444 GLY PRO ALA TYR ASN PRO GLU MET LEU LYS LYS ARG GLN SEQRES 2 A 444 LEU THR VAL LEU ASP LEU HIS PRO GLY ALA GLY LYS THR SEQRES 3 A 444 ARG ARG ILE LEU PRO GLN ILE ILE LYS ASP ALA ILE GLN SEQRES 4 A 444 LYS ARG LEU ARG THR ALA VAL LEU ALA PRO THR ARG VAL SEQRES 5 A 444 VAL ALA ALA GLU MET ALA GLU ALA LEU ARG GLY LEU PRO SEQRES 6 A 444 VAL ARG TYR LEU THR PRO ALA VAL GLN ARG GLU HIS SER SEQRES 7 A 444 GLY ASN GLU ILE VAL ASP VAL MET CYS HIS ALA THR LEU SEQRES 8 A 444 THR HIS ARG LEU MET SER PRO LEU ARG VAL PRO ASN TYR SEQRES 9 A 444 ASN LEU PHE VAL MET ASP GLU ALA HIS PHE THR ASP PRO SEQRES 10 A 444 ALA SER ILE ALA ALA ARG GLY TYR ILE ALA THR ARG VAL SEQRES 11 A 444 GLU ALA GLY GLU ALA ALA ALA ILE PHE MET THR ALA THR SEQRES 12 A 444 PRO PRO GLY THR SER ASP PRO PHE PRO ASP THR ASN SER SEQRES 13 A 444 PRO VAL HIS ASP VAL SER SER GLU ILE PRO ASP ARG ALA SEQRES 14 A 444 TRP SER SER GLY PHE GLU TRP ILE THR ASP TYR ALA GLY SEQRES 15 A 444 LYS THR VAL TRP PHE VAL ALA SER VAL LYS MET SER ASN SEQRES 16 A 444 GLU ILE ALA GLN CYS LEU GLN ARG ALA GLY LYS ARG VAL SEQRES 17 A 444 ILE GLN LEU ASN ARG LYS SER TYR ASP THR GLU TYR PRO SEQRES 18 A 444 LYS CYS LYS ASN GLY ASP TRP ASP PHE VAL ILE THR THR SEQRES 19 A 444 ASP ILE SER GLU MET GLY ALA ASN PHE GLY ALA SER ARG SEQRES 20 A 444 VAL ILE ASP CYS ARG LYS SER VAL LYS PRO THR ILE LEU SEQRES 21 A 444 ASP GLU GLY GLU GLY ARG VAL ILE LEU SER VAL PRO SER SEQRES 22 A 444 ALA ILE THR SER ALA SER ALA ALA GLN ARG ARG GLY ARG SEQRES 23 A 444 VAL GLY ARG ASN PRO SER GLN ILE GLY ASP GLU TYR HIS SEQRES 24 A 444 TYR GLY GLY GLY THR SER GLU ASP ASP THR MET LEU ALA SEQRES 25 A 444 HIS TRP THR GLU ALA LYS ILE LEU LEU ASP ASN ILE HIS SEQRES 26 A 444 LEU PRO ASN GLY LEU VAL ALA GLN LEU TYR GLY PRO GLU SEQRES 27 A 444 ARG ASP LYS THR TYR THR MET ASP GLY GLU TYR ARG LEU SEQRES 28 A 444 ARG GLY GLU GLU ARG LYS THR PHE LEU GLU LEU ILE LYS SEQRES 29 A 444 THR ALA ASP LEU PRO VAL TRP LEU ALA TYR LYS VAL ALA SEQRES 30 A 444 SER ASN GLY ILE GLN TYR ASN ASP ARG LYS TRP CYS PHE SEQRES 31 A 444 ASP GLY PRO ARG SER ASN ILE ILE LEU GLU ASP ASN ASN SEQRES 32 A 444 GLU VAL GLU ILE ILE THR ARG ILE GLY GLU ARG LYS VAL SEQRES 33 A 444 LEU LYS PRO ARG TRP LEU ASP ALA ARG VAL TYR SER ASP SEQRES 34 A 444 HIS GLN SER LEU LYS TRP PHE LYS ASP PHE ALA ALA GLY SEQRES 35 A 444 LYS ARG FORMUL 2 HOH *284(H2 O) HELIX 1 1 ASN A 180 LYS A 185 5 6 HELIX 2 2 ARG A 203 LYS A 215 1 13 HELIX 3 3 THR A 225 LEU A 236 1 12 HELIX 4 4 HIS A 263 MET A 271 1 9 HELIX 5 5 ASP A 291 ALA A 307 1 17 HELIX 6 6 PHE A 349 TYR A 355 1 7 HELIX 7 7 SER A 365 ALA A 379 1 15 HELIX 8 8 SER A 390 LYS A 399 1 10 HELIX 9 9 ASP A 410 MET A 414 5 5 HELIX 10 10 THR A 451 GLY A 460 1 10 HELIX 11 11 LEU A 486 ASP A 497 1 12 HELIX 12 12 TYR A 510 ARG A 514 5 5 HELIX 13 13 ARG A 527 THR A 540 1 14 HELIX 14 14 PRO A 544 SER A 553 1 10 HELIX 15 15 ASP A 560 PHE A 565 5 6 HELIX 16 16 PRO A 568 ILE A 572 5 5 HELIX 17 17 ARG A 600 TYR A 602 5 3 HELIX 18 18 ASP A 604 ALA A 616 1 13 SHEET 1 AA 6 LEU A 189 LEU A 192 0 SHEET 2 AA 6 ALA A 311 MET A 315 1 O ALA A 312 N THR A 190 SHEET 3 AA 6 LEU A 281 ASP A 285 1 O PHE A 282 N ILE A 313 SHEET 4 AA 6 THR A 219 ALA A 223 1 O ALA A 220 N VAL A 283 SHEET 5 AA 6 VAL A 258 CYS A 262 1 O ASP A 259 N VAL A 221 SHEET 6 AA 6 VAL A 241 TYR A 243 1 O ARG A 242 N VAL A 260 SHEET 1 AB 6 VAL A 333 SER A 337 0 SHEET 2 AB 6 ASP A 471 TYR A 475 1 O ASP A 471 N HIS A 334 SHEET 3 AB 6 ARG A 422 ASP A 425 1 O VAL A 423 N HIS A 474 SHEET 4 AB 6 THR A 359 PHE A 362 1 O VAL A 360 N ILE A 424 SHEET 5 AB 6 PHE A 405 THR A 408 1 O VAL A 406 N TRP A 361 SHEET 6 AB 6 VAL A 383 LEU A 386 1 O ILE A 384 N ILE A 407 SHEET 1 AC 2 LYS A 428 SER A 429 0 SHEET 2 AC 2 SER A 448 ALA A 449 -1 O SER A 448 N SER A 429 SHEET 1 AD 3 PRO A 432 LEU A 435 0 SHEET 2 AD 3 ARG A 441 LEU A 444 -1 O ARG A 441 N LEU A 435 SHEET 3 AD 3 LEU A 597 ASP A 598 1 O LEU A 597 N VAL A 442 CISPEP 1 ALA A 198 GLY A 199 0 -6.85 CISPEP 2 ASN A 578 GLU A 579 0 22.93 CISPEP 3 ALA A 616 GLY A 617 0 15.15 CISPEP 4 GLY A 617 LYS A 618 0 -15.64 CRYST1 42.516 76.414 70.609 90.00 91.73 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023521 0.000000 0.000710 0.00000 SCALE2 0.000000 0.013087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014169 0.00000