HEADER RECEPTOR 25-AUG-07 2V9Q TITLE FIRST AND SECOND IG DOMAINS FROM HUMAN ROBO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ROUNDABOUT HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG1-2M, RESIDUES 61-266; COMPND 5 SYNONYM: H-ROBO-1, DELETED IN U TWENTY TWENTY, ROBO1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK293-EBNA1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: MODIFIED PTT3 KEYWDS PROTO-ONCOGENE, DIFFERENTIATION, PHOSPHORYLATION, DISEASE MUTATION, KEYWDS 2 NEURONAL DEVELOPMENT, IMMUNOGLOBULIN DOMAIN, CHEMOTAXIS, KEYWDS 3 NEUROGENESIS, GLYCOPROTEIN, TRANSMEMBRANE, ROBO1, MEMBRANE, KEYWDS 4 RECEPTOR, IG DOMAIN, ROUNDABOUT, DEVELOPMENTAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.MORLOT,S.CUSACK,A.A.MCCARTHY REVDAT 4 13-JUL-11 2V9Q 1 VERSN REVDAT 3 24-FEB-09 2V9Q 1 VERSN REVDAT 2 02-OCT-07 2V9Q 1 JRNL REVDAT 1 25-SEP-07 2V9Q 0 JRNL AUTH C.MORLOT,N.M.THIELENS,R.B.G.RAVELLI,W.HEMRIKA,R.A.ROMIJN, JRNL AUTH 2 P.GROS,S.CUSACK,A.A.MCCARTHY JRNL TITL STRUCTURAL INSIGHTS INTO THE SLIT-ROBO COMPLEX. JRNL REF PROC.NAT.ACAD.SCI.USA V. 104 14923 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17848514 JRNL DOI 10.1073/PNAS.0705310104 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.MORLOT,W.HEMRIKA,R.A.ROMIJN,P.GROS,S.CUSACK,A.A.MCCARTHY REMARK 1 TITL CLONING, EXPRESSION, CRYSTALLIZATION AND PRELIMINARY X-RAY REMARK 1 TITL 2 ANALYSIS OF THE FIRST TWO IG DOMAINS FROM HUMAN ROUNDABOUT REMARK 1 TITL 3 1 (ROBO1). REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 63 689 2007 REMARK 1 REFN ISSN 1744-3091 REMARK 1 PMID 17671369 REMARK 1 DOI 10.1107/S1744309107033027 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 9334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 469 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.4200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1627 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.45000 REMARK 3 B22 (A**2) : 3.94000 REMARK 3 B33 (A**2) : -2.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.472 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.305 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.230 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.896 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1664 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2254 ; 1.602 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 207 ; 8.256 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;35.237 ;23.026 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 290 ;22.731 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;21.014 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1275 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 606 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1084 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 73 ; 0.196 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 34 ; 0.217 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.306 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1070 ; 0.715 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1690 ; 1.211 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 661 ; 1.718 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 564 ; 3.120 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 61 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9441 -17.8426 -36.4342 REMARK 3 T TENSOR REMARK 3 T11: 0.0495 T22: 0.1103 REMARK 3 T33: -0.0679 T12: -0.0726 REMARK 3 T13: 0.0131 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 0.9031 L22: 0.9812 REMARK 3 L33: 4.6230 L12: 0.2440 REMARK 3 L13: -0.3137 L23: -0.4871 REMARK 3 S TENSOR REMARK 3 S11: -0.1353 S12: 0.2715 S13: 0.0401 REMARK 3 S21: -0.1832 S22: 0.0853 S23: -0.0886 REMARK 3 S31: -0.0684 S32: -0.0523 S33: 0.0500 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4362 -10.2947 9.4598 REMARK 3 T TENSOR REMARK 3 T11: -0.0316 T22: 0.0159 REMARK 3 T33: 0.0230 T12: 0.0035 REMARK 3 T13: 0.0252 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 0.9105 L22: 0.4676 REMARK 3 L33: 4.9129 L12: -0.2546 REMARK 3 L13: 1.5105 L23: 0.4343 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.0752 S13: -0.0030 REMARK 3 S21: -0.0592 S22: 0.0856 S23: 0.0868 REMARK 3 S31: -0.0539 S32: 0.1651 S33: -0.0628 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2V9Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-AUG-07. REMARK 100 THE PDBE ID CODE IS EBI-33268. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.009 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32973 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.50 REMARK 200 RESOLUTION RANGE LOW (A) : 30.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 1.9 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.10 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.4 REMARK 200 R MERGE FOR SHELL (I) : 0.32 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.8 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-20% PEG 3350, 0.2M K REMARK 280 THIOCYNATE, 0.1M MES, PH=6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 19.11500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.26500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.11500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.26500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 HOH A2056 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASN 160 TO ASP REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 59 REMARK 465 SER A 60 REMARK 465 ALA A 269 REMARK 465 HIS A 270 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 89 124.27 -171.38 REMARK 500 PRO A 95 156.74 -31.55 REMARK 500 HIS A 134 100.54 -169.05 REMARK 500 ASN A 151 -159.28 -125.15 REMARK 500 ASP A 171 107.90 -57.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 95 THR A 96 57.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V9R RELATED DB: PDB REMARK 900 FIRST AND SECOND IG DOMAINS FROM HUMAN REMARK 900 ROBO1 (FORM 2) REMARK 900 RELATED ID: 2V9S RELATED DB: PDB REMARK 900 SECOND LRR DOMAIN OF HUMAN SLIT2 REMARK 900 RELATED ID: 2V9T RELATED DB: PDB REMARK 900 COMPLEX BETWEEN THE SECOND LRR DOMAIN OF REMARK 900 SLIT2 AND THE FIRST IG DOMAIN FROM ROBO1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 A N160D MUTATION WAS MADE TO PREVENT POTENTIAL REMARK 999 GLYCOSYLATION DBREF 2V9Q A 59 60 PDB 2V9Q 2V9Q 59 60 DBREF 2V9Q A 61 266 UNP Q9Y6N7 ROBO1_HUMAN 61 266 DBREF 2V9Q A 267 270 PDB 2V9Q 2V9Q 267 270 SEQADV 2V9Q ASP A 160 UNP Q9Y6N7 ASN 160 ENGINEERED MUTATION SEQRES 1 A 212 GLY SER LEU ARG GLN GLU ASP PHE PRO PRO ARG ILE VAL SEQRES 2 A 212 GLU HIS PRO SER ASP LEU ILE VAL SER LYS GLY GLU PRO SEQRES 3 A 212 ALA THR LEU ASN CYS LYS ALA GLU GLY ARG PRO THR PRO SEQRES 4 A 212 THR ILE GLU TRP TYR LYS GLY GLY GLU ARG VAL GLU THR SEQRES 5 A 212 ASP LYS ASP ASP PRO ARG SER HIS ARG MET LEU LEU PRO SEQRES 6 A 212 SER GLY SER LEU PHE PHE LEU ARG ILE VAL HIS GLY ARG SEQRES 7 A 212 LYS SER ARG PRO ASP GLU GLY VAL TYR VAL CYS VAL ALA SEQRES 8 A 212 ARG ASN TYR LEU GLY GLU ALA VAL SER HIS ASP ALA SER SEQRES 9 A 212 LEU GLU VAL ALA ILE LEU ARG ASP ASP PHE ARG GLN ASN SEQRES 10 A 212 PRO SER ASP VAL MET VAL ALA VAL GLY GLU PRO ALA VAL SEQRES 11 A 212 MET GLU CYS GLN PRO PRO ARG GLY HIS PRO GLU PRO THR SEQRES 12 A 212 ILE SER TRP LYS LYS ASP GLY SER PRO LEU ASP ASP LYS SEQRES 13 A 212 ASP GLU ARG ILE THR ILE ARG GLY GLY LYS LEU MET ILE SEQRES 14 A 212 THR TYR THR ARG LYS SER ASP ALA GLY LYS TYR VAL CYS SEQRES 15 A 212 VAL GLY THR ASN MET VAL GLY GLU ARG GLU SER GLU VAL SEQRES 16 A 212 ALA GLU LEU THR VAL LEU GLU ARG PRO SER PHE VAL LYS SEQRES 17 A 212 ALA ALA ALA HIS HET HG A1001 1 HET HG A1002 1 HETNAM HG MERCURY (II) ION FORMUL 2 HG 2(HG 2+) FORMUL 3 HOH *64(H2 O) HELIX 1 1 ARG A 231 ALA A 235 5 5 HELIX 2 2 GLU A 260 ALA A 268 1 9 SHEET 1 AA 2 PHE A 66 GLU A 72 0 SHEET 2 AA 2 LYS A 90 ARG A 94 -1 O LYS A 90 N VAL A 71 SHEET 1 AB 3 LEU A 77 SER A 80 0 SHEET 2 AB 3 ALA A 161 LEU A 168 1 O SER A 162 N LEU A 77 SHEET 3 AB 3 GLY A 143 ARG A 150 -1 O GLY A 143 N LEU A 163 SHEET 1 AC 3 LEU A 77 SER A 80 0 SHEET 2 AC 3 ALA A 161 LEU A 168 1 O SER A 162 N LEU A 77 SHEET 3 AC 3 GLY A 196 HIS A 197 -1 O HIS A 197 N ILE A 167 SHEET 1 AD 3 ALA A 85 LEU A 87 0 SHEET 2 AD 3 LEU A 127 PHE A 129 -1 O LEU A 127 N LEU A 87 SHEET 3 AD 3 ARG A 119 LEU A 121 -1 O MET A 120 N PHE A 128 SHEET 1 AE 5 VAL A 179 ALA A 182 0 SHEET 2 AE 5 ALA A 254 LEU A 259 1 O GLU A 255 N VAL A 179 SHEET 3 AE 5 GLY A 236 ASN A 244 -1 O GLY A 236 N LEU A 256 SHEET 4 AE 5 THR A 201 LYS A 206 -1 O THR A 201 N THR A 243 SHEET 5 AE 5 SER A 209 PRO A 210 -1 O SER A 209 N LYS A 206 SHEET 1 AF 4 VAL A 179 ALA A 182 0 SHEET 2 AF 4 ALA A 254 LEU A 259 1 O GLU A 255 N VAL A 179 SHEET 3 AF 4 GLY A 236 ASN A 244 -1 O GLY A 236 N LEU A 256 SHEET 4 AF 4 GLY A 247 GLU A 250 -1 O GLY A 247 N ASN A 244 SHEET 1 AG 3 ALA A 187 GLU A 190 0 SHEET 2 AG 3 LYS A 224 ILE A 227 -1 O LEU A 225 N MET A 189 SHEET 3 AG 3 ILE A 218 ARG A 221 -1 O THR A 219 N MET A 226 SSBOND 1 CYS A 89 CYS A 147 1555 1555 2.06 SSBOND 2 CYS A 191 CYS A 240 1555 1555 2.02 LINK HG HG A1001 O HOH A2025 1555 1555 2.98 CISPEP 1 ARG A 94 PRO A 95 0 -15.59 CISPEP 2 HIS A 197 PRO A 198 0 -5.39 SITE 1 AC1 1 HOH A2025 CRYST1 38.230 68.530 103.880 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026157 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009626 0.00000