HEADER TRANSFERASE 28-AUG-07 2VA0 TITLE DIFFERENTIAL REGULATION OF THE XYLAN DEGRADING APPARATUS OF TITLE 2 CELLVIBRIO JAPONICUS BY A NOVEL TWO COMPONENT SYSTEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABFS ARABINOFURANOSIDASE TWO COMPONENT SYSTEM SENSOR COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 FRAGMENT: SENSOR DOMAIN, RESIDUES 44-165; COMPND 6 SYNONYM: SENSOR HISTIDINE KINASE A, ABFS; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CELLVIBRIO JAPONICUS; SOURCE 3 ORGANISM_TAXID: 155077; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS KINASE, PAS DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MURRAY,K.EMAMI,E.TOPAKAS,T.NAGY,J.HENSHAW,K.A.JACKSON,K.E.NELSON, AUTHOR 2 E.F.MONGODIN,R.J.LEWIS,H.J.GILBERT REVDAT 5 28-SEP-11 2VA0 1 SITE HETATM REVDAT 4 13-JUL-11 2VA0 1 VERSN REVDAT 3 13-JAN-09 2VA0 1 VERSN JRNL REMARK REVDAT 2 28-OCT-08 2VA0 1 JRNL REMARK REVDAT 1 14-OCT-08 2VA0 0 JRNL AUTH K.EMAMI,E.TOPAKAS,T.NAGY,J.HENSHAW,K.A.JACKSON,K.E.NELSON, JRNL AUTH 2 E.F.MONGODIN,J.W.MURRAY,R.J.LEWIS,H.J.GILBERT JRNL TITL REGULATION OF THE XYLAN-DEGRADING APPARATUS OF CELLVIBRIO JRNL TITL 2 JAPONICUS BY A NOVEL TWO-COMPONENT SYSTEM. JRNL REF J.BIOL.CHEM. V. 284 1086 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 18922794 JRNL DOI 10.1074/JBC.M805100200 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.602 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.037 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.849 REMARK 3 NUMBER OF REFLECTIONS : 27692 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.1994 REMARK 3 FREE R VALUE : 0.2588 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.24 REMARK 3 FREE R VALUE TEST SET COUNT : 1430 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1905 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.286 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.312 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 5290 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : UNVERIFIED REMARK 3 FROM WILSON PLOT (A**2) : 49.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.255 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.514 REMARK 3 B22 (A**2) : 0.178 REMARK 3 B33 (A**2) : -0.692 REMARK 3 B12 (A**2) : 0.000 REMARK 3 B13 (A**2) : 0.000 REMARK 3 B23 (A**2) : 0.000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.538 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.308 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.213 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.879 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5274 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3728 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7146 ; 1.880 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9032 ; 1.111 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 627 ; 7.455 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 261 ;36.461 ;23.103 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 957 ;17.943 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 63 ;19.732 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 795 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5730 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1045 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1130 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3809 ; 0.215 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2523 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3017 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 115 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.225 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 57 ; 0.265 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4049 ; 0.961 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5180 ; 1.158 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2381 ; 1.977 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1966 ; 2.886 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D E F REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 10 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 49 A 52 2 REMARK 3 1 B 47 B 52 2 REMARK 3 1 C 48 C 52 2 REMARK 3 1 D 49 D 52 2 REMARK 3 1 E 49 E 52 2 REMARK 3 1 F 49 F 52 2 REMARK 3 2 A 54 A 55 2 REMARK 3 2 B 54 B 55 2 REMARK 3 2 C 54 C 55 2 REMARK 3 2 D 54 D 55 2 REMARK 3 2 E 54 E 55 2 REMARK 3 2 F 54 F 55 2 REMARK 3 3 A 58 A 60 2 REMARK 3 3 B 58 B 60 2 REMARK 3 3 C 58 C 60 2 REMARK 3 3 D 58 D 60 2 REMARK 3 3 E 58 E 60 2 REMARK 3 3 F 58 F 60 2 REMARK 3 4 A 62 A 67 2 REMARK 3 4 B 62 B 67 2 REMARK 3 4 C 62 C 67 2 REMARK 3 4 D 62 D 67 2 REMARK 3 4 E 62 E 67 2 REMARK 3 4 F 62 F 67 2 REMARK 3 5 A 69 A 79 2 REMARK 3 5 B 69 B 79 2 REMARK 3 5 C 69 C 79 2 REMARK 3 5 D 69 D 79 2 REMARK 3 5 E 69 E 79 2 REMARK 3 5 F 69 F 79 2 REMARK 3 6 A 81 A 82 2 REMARK 3 6 B 81 B 82 2 REMARK 3 6 C 81 C 82 2 REMARK 3 6 D 81 D 82 2 REMARK 3 6 E 81 E 82 2 REMARK 3 6 F 81 F 82 2 REMARK 3 7 A 84 A 89 2 REMARK 3 7 B 84 B 89 2 REMARK 3 7 C 84 C 89 2 REMARK 3 7 D 84 D 89 2 REMARK 3 7 E 84 E 89 2 REMARK 3 7 F 84 F 89 2 REMARK 3 8 A 91 A 123 2 REMARK 3 8 B 91 B 123 2 REMARK 3 8 C 91 C 123 2 REMARK 3 8 D 91 D 123 2 REMARK 3 8 E 91 E 123 2 REMARK 3 8 F 91 F 123 2 REMARK 3 9 A 127 A 137 2 REMARK 3 9 B 127 B 137 2 REMARK 3 9 C 127 C 137 2 REMARK 3 9 D 127 D 137 2 REMARK 3 9 E 127 E 137 2 REMARK 3 9 F 127 F 137 2 REMARK 3 10 A 139 A 146 2 REMARK 3 10 B 139 B 146 2 REMARK 3 10 C 139 C 146 2 REMARK 3 10 D 139 D 146 2 REMARK 3 10 E 139 E 146 2 REMARK 3 10 F 139 F 146 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 499 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 499 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 499 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 499 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 E (A): 499 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 F (A): 499 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 640 ; 0.32 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 640 ; 0.30 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 640 ; 0.27 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 640 ; 0.26 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 E (A): 640 ; 0.33 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 F (A): 640 ; 0.28 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 499 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 499 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 499 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 499 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 1 E (A**2): 499 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 1 F (A**2): 499 ; 0.10 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 640 ; 0.52 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 640 ; 0.62 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 640 ; 0.58 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 640 ; 0.53 ; 2.00 REMARK 3 MEDIUM THERMAL 1 E (A**2): 640 ; 0.51 ; 2.00 REMARK 3 MEDIUM THERMAL 1 F (A**2): 640 ; 0.52 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4270 6.0810 81.2900 REMARK 3 T TENSOR REMARK 3 T11: 0.0104 T22: 0.2217 REMARK 3 T33: -0.0092 T12: 0.0196 REMARK 3 T13: -0.1196 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.6890 L22: 2.8595 REMARK 3 L33: 4.6937 L12: -0.3937 REMARK 3 L13: -2.7802 L23: -0.3064 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.6803 S13: 0.0684 REMARK 3 S21: 0.5489 S22: 0.0127 S23: -0.3663 REMARK 3 S31: -0.0937 S32: 0.7414 S33: 0.0139 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 147 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1960 14.0870 58.4010 REMARK 3 T TENSOR REMARK 3 T11: -0.2278 T22: -0.0767 REMARK 3 T33: -0.0772 T12: -0.0089 REMARK 3 T13: -0.0040 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 2.3415 L22: 4.0516 REMARK 3 L33: 2.8068 L12: -0.6315 REMARK 3 L13: 0.3095 L23: 0.5944 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: -0.1091 S13: 0.1022 REMARK 3 S21: 0.0480 S22: 0.0234 S23: 0.0150 REMARK 3 S31: -0.0079 S32: 0.0244 S33: -0.0953 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 48 C 146 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7110 -12.7120 47.3280 REMARK 3 T TENSOR REMARK 3 T11: -0.2457 T22: -0.0992 REMARK 3 T33: -0.0259 T12: 0.0183 REMARK 3 T13: -0.0208 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 3.3482 L22: 3.4453 REMARK 3 L33: 2.5532 L12: -0.8458 REMARK 3 L13: -0.3194 L23: 0.6411 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: -0.2350 S13: -0.2035 REMARK 3 S21: 0.0325 S22: 0.0607 S23: -0.1172 REMARK 3 S31: 0.0715 S32: 0.0834 S33: -0.0734 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 49 D 146 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6870 -0.6680 24.5530 REMARK 3 T TENSOR REMARK 3 T11: -0.0746 T22: -0.0744 REMARK 3 T33: -0.0127 T12: -0.0103 REMARK 3 T13: 0.0387 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.3525 L22: 4.3301 REMARK 3 L33: 4.0947 L12: 0.3130 REMARK 3 L13: 1.4851 L23: 0.4220 REMARK 3 S TENSOR REMARK 3 S11: -0.0290 S12: 0.2594 S13: 0.1023 REMARK 3 S21: -0.4137 S22: 0.0363 S23: -0.4433 REMARK 3 S31: -0.2746 S32: 0.4410 S33: -0.0073 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 49 E 147 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8270 -19.2080 13.4470 REMARK 3 T TENSOR REMARK 3 T11: 0.1215 T22: -0.1373 REMARK 3 T33: -0.0649 T12: -0.0056 REMARK 3 T13: -0.0355 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.9389 L22: 3.9566 REMARK 3 L33: 2.9613 L12: 0.4479 REMARK 3 L13: 0.5980 L23: 1.1007 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: -0.0310 S13: -0.1039 REMARK 3 S21: -0.0184 S22: -0.1047 S23: 0.1604 REMARK 3 S31: 0.3646 S32: -0.1141 S33: 0.0478 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 49 F 147 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7050 -15.1640 -9.5190 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.0311 REMARK 3 T33: -0.0584 T12: 0.1197 REMARK 3 T13: -0.0104 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 3.7524 L22: 1.7366 REMARK 3 L33: 5.1420 L12: 1.0787 REMARK 3 L13: 1.0256 L23: -0.8446 REMARK 3 S TENSOR REMARK 3 S11: 0.0599 S12: 0.4469 S13: -0.2765 REMARK 3 S21: -0.0086 S22: -0.0093 S23: -0.1370 REMARK 3 S31: 0.2803 S32: 0.4083 S33: -0.0506 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 151 B 168 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8050 24.0710 54.0350 REMARK 3 T TENSOR REMARK 3 T11: -0.2226 T22: -0.0779 REMARK 3 T33: 0.0671 T12: -0.0670 REMARK 3 T13: -0.0213 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 9.2974 L22: 7.2036 REMARK 3 L33: 21.7454 L12: 2.9305 REMARK 3 L13: -8.4417 L23: -3.0503 REMARK 3 S TENSOR REMARK 3 S11: 0.0799 S12: 0.2367 S13: 0.3179 REMARK 3 S21: 0.1202 S22: 0.0406 S23: -0.3129 REMARK 3 S31: -0.0891 S32: -0.4808 S33: -0.1205 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 148 E 168 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5430 -41.3570 18.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.2775 T22: -0.3573 REMARK 3 T33: 0.0496 T12: 0.0134 REMARK 3 T13: 0.0450 T23: 0.0849 REMARK 3 L TENSOR REMARK 3 L11: 3.9433 L22: 15.9791 REMARK 3 L33: 4.4043 L12: -2.4995 REMARK 3 L13: -0.4015 L23: 2.8146 REMARK 3 S TENSOR REMARK 3 S11: 0.3903 S12: -0.4012 S13: -0.0888 REMARK 3 S21: 0.0833 S22: -0.4509 S23: 0.3154 REMARK 3 S31: 0.3382 S32: 0.0115 S33: 0.0606 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.400 REMARK 3 ION PROBE RADIUS : 0.800 REMARK 3 SHRINKAGE RADIUS : 0.8 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2VA0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-AUG-07. REMARK 100 THE PDBE ID CODE IS EBI-33595. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27726 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.60 REMARK 200 RESOLUTION RANGE LOW (A) : 37.56 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.69 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.06 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.1 REMARK 200 R MERGE FOR SHELL (I) : 0.26 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.34 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 53.88600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.00700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.88600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.00700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 43 REMARK 465 TYR A 44 REMARK 465 LEU A 45 REMARK 465 PRO A 46 REMARK 465 ASP A 47 REMARK 465 ASP A 48 REMARK 465 GLY A 148 REMARK 465 ARG A 149 REMARK 465 ASP A 150 REMARK 465 GLU A 151 REMARK 465 GLY A 152 REMARK 465 PRO A 153 REMARK 465 ASP A 154 REMARK 465 ARG A 155 REMARK 465 ASP A 156 REMARK 465 ILE A 157 REMARK 465 ILE A 158 REMARK 465 TRP A 159 REMARK 465 GLU A 160 REMARK 465 MET A 161 REMARK 465 PHE A 162 REMARK 465 LEU A 163 REMARK 465 GLU A 164 REMARK 465 ASN A 165 REMARK 465 LEU A 166 REMARK 465 GLU A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 MET B 43 REMARK 465 TYR B 44 REMARK 465 LEU B 45 REMARK 465 PRO B 46 REMARK 465 GLY B 148 REMARK 465 ARG B 149 REMARK 465 ASP B 150 REMARK 465 HIS B 169 REMARK 465 HIS B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 MET C 43 REMARK 465 TYR C 44 REMARK 465 LEU C 45 REMARK 465 PRO C 46 REMARK 465 ASP C 47 REMARK 465 ALA C 147 REMARK 465 GLY C 148 REMARK 465 ARG C 149 REMARK 465 ASP C 150 REMARK 465 GLU C 151 REMARK 465 GLY C 152 REMARK 465 PRO C 153 REMARK 465 ASP C 154 REMARK 465 ARG C 155 REMARK 465 ASP C 156 REMARK 465 ILE C 157 REMARK 465 ILE C 158 REMARK 465 TRP C 159 REMARK 465 GLU C 160 REMARK 465 MET C 161 REMARK 465 PHE C 162 REMARK 465 LEU C 163 REMARK 465 GLU C 164 REMARK 465 ASN C 165 REMARK 465 LEU C 166 REMARK 465 GLU C 167 REMARK 465 HIS C 168 REMARK 465 HIS C 169 REMARK 465 HIS C 170 REMARK 465 HIS C 171 REMARK 465 HIS C 172 REMARK 465 HIS C 173 REMARK 465 MET D 43 REMARK 465 TYR D 44 REMARK 465 LEU D 45 REMARK 465 PRO D 46 REMARK 465 ASP D 47 REMARK 465 ASP D 48 REMARK 465 ALA D 147 REMARK 465 GLY D 148 REMARK 465 ARG D 149 REMARK 465 ASP D 150 REMARK 465 GLU D 151 REMARK 465 GLY D 152 REMARK 465 PRO D 153 REMARK 465 ASP D 154 REMARK 465 ARG D 155 REMARK 465 ASP D 156 REMARK 465 ILE D 157 REMARK 465 ILE D 158 REMARK 465 TRP D 159 REMARK 465 GLU D 160 REMARK 465 MET D 161 REMARK 465 PHE D 162 REMARK 465 LEU D 163 REMARK 465 GLU D 164 REMARK 465 ASN D 165 REMARK 465 LEU D 166 REMARK 465 GLU D 167 REMARK 465 HIS D 168 REMARK 465 HIS D 169 REMARK 465 HIS D 170 REMARK 465 HIS D 171 REMARK 465 HIS D 172 REMARK 465 HIS D 173 REMARK 465 MET E 43 REMARK 465 TYR E 44 REMARK 465 LEU E 45 REMARK 465 PRO E 46 REMARK 465 ASP E 47 REMARK 465 ASP E 48 REMARK 465 HIS E 169 REMARK 465 HIS E 170 REMARK 465 HIS E 171 REMARK 465 HIS E 172 REMARK 465 HIS E 173 REMARK 465 MET F 43 REMARK 465 TYR F 44 REMARK 465 LEU F 45 REMARK 465 PRO F 46 REMARK 465 ASP F 47 REMARK 465 ASP F 48 REMARK 465 GLY F 148 REMARK 465 ARG F 149 REMARK 465 ASP F 150 REMARK 465 GLU F 151 REMARK 465 GLY F 152 REMARK 465 PRO F 153 REMARK 465 ASP F 154 REMARK 465 ARG F 155 REMARK 465 ASP F 156 REMARK 465 ILE F 157 REMARK 465 ILE F 158 REMARK 465 TRP F 159 REMARK 465 GLU F 160 REMARK 465 MET F 161 REMARK 465 PHE F 162 REMARK 465 LEU F 163 REMARK 465 GLU F 164 REMARK 465 ASN F 165 REMARK 465 LEU F 166 REMARK 465 GLU F 167 REMARK 465 HIS F 168 REMARK 465 HIS F 169 REMARK 465 HIS F 170 REMARK 465 HIS F 171 REMARK 465 HIS F 172 REMARK 465 HIS F 173 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR C 67 OD2 ASP C 136 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B 85 CB VAL B 85 CG2 -0.133 REMARK 500 ASP C 73 CB ASP C 73 CG -0.131 REMARK 500 ASP D 136 CB ASP D 136 CG -0.138 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 58 CG - SD - CE ANGL. DEV. = -11.7 DEGREES REMARK 500 VAL B 85 CB - CA - C ANGL. DEV. = -12.3 DEGREES REMARK 500 ASP B 118 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG C 65 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG C 65 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP C 73 CB - CA - C ANGL. DEV. = 13.5 DEGREES REMARK 500 ASP C 73 CB - CG - OD1 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG D 65 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG D 65 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP D 136 CB - CG - OD1 ANGL. DEV. = -7.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG C 83 -7.66 -58.29 REMARK 500 ASP E 150 -68.45 19.78 REMARK 500 ASP E 154 151.44 -35.53 REMARK 500 ARG F 83 -28.50 -38.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 47 ASP B 48 139.93 REMARK 500 ARG E 149 ASP E 150 126.71 REMARK 500 ASP E 150 GLU E 151 -148.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D1147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 E1169 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C1147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B1169 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 F1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL F1149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1149 REMARK 999 REMARK 999 SEQUENCE REMARK 999 TIFR ORF ORF03629 RELEASED AS UNP B3PFT7 . RESIDUES 166 REMARK 999 TO 173 CORRESPOND TO A C-TERMINAL HIS-TAG. DBREF 2VA0 A 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 DBREF 2VA0 B 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 DBREF 2VA0 C 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 DBREF 2VA0 D 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 DBREF 2VA0 E 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 DBREF 2VA0 F 44 165 UNP B3PFT7 B3PFT7_CELJU 44 165 SEQADV 2VA0 MET A 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU A 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU A 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS A 173 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 MET B 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU B 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU B 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS B 173 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 MET C 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU C 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU C 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS C 173 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 MET D 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU D 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU D 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS D 173 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 MET E 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU E 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU E 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS E 173 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 MET F 43 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 LEU F 166 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 GLU F 167 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 168 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 169 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 170 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 171 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 172 UNP B3PFT7 EXPRESSION TAG SEQADV 2VA0 HIS F 173 UNP B3PFT7 EXPRESSION TAG SEQRES 1 A 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 A 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 A 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 A 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 A 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 A 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 A 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 A 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 A 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 A 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 A 131 HIS SEQRES 1 B 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 B 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 B 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 B 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 B 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 B 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 B 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 B 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 B 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 B 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 B 131 HIS SEQRES 1 C 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 C 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 C 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 C 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 C 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 C 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 C 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 C 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 C 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 C 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 C 131 HIS SEQRES 1 D 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 D 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 D 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 D 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 D 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 D 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 D 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 D 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 D 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 D 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 D 131 HIS SEQRES 1 E 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 E 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 E 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 E 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 E 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 E 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 E 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 E 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 E 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 E 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 E 131 HIS SEQRES 1 F 131 MET TYR LEU PRO ASP ASP SER PRO ALA LYS ARG LEU LEU SEQRES 2 F 131 PHE GLN MET VAL GLY ASN ALA ILE ASN ARG ASN THR GLN SEQRES 3 F 131 GLN LEU THR GLN ASP LEU ARG ALA MET PRO ASN TRP SER SEQRES 4 F 131 LEU ARG PHE VAL TYR ILE VAL ASP ARG ASN ASN GLN ASP SEQRES 5 F 131 LEU LEU LYS ARG PRO LEU PRO PRO GLY ILE MET VAL LEU SEQRES 6 F 131 ALA PRO ARG LEU THR ALA LYS HIS PRO TYR ASP LYS VAL SEQRES 7 F 131 GLN ASP ARG ASN ARG LYS LEU TYR GLY ARG HIS ILE THR SEQRES 8 F 131 LEU ASN ASP GLY ASN SER VAL LYS VAL VAL THR ILE SER SEQRES 9 F 131 ALA GLY ARG ASP GLU GLY PRO ASP ARG ASP ILE ILE TRP SEQRES 10 F 131 GLU MET PHE LEU GLU ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 11 F 131 HIS HET PO4 D1147 5 HET PO4 E1169 5 HET PO4 C1147 5 HET PO4 B1169 5 HET PO4 F1148 5 HET PO4 A1148 5 HET CL C1148 1 HET CL F1149 1 HET CL A1149 1 HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION FORMUL 7 PO4 6(O4 P 3-) FORMUL 8 CL 3(CL 1-) FORMUL 9 HOH *106(H2 O) HELIX 1 1 SER A 49 ILE A 63 1 15 HELIX 2 2 ASN A 66 ALA A 76 1 11 HELIX 3 3 PRO A 78 ARG A 83 1 6 HELIX 4 4 GLY A 103 ALA A 108 1 6 HELIX 5 5 PRO A 109 LEU A 111 5 3 HELIX 6 6 SER B 49 ILE B 63 1 15 HELIX 7 7 ASN B 66 MET B 77 1 12 HELIX 8 8 PRO B 78 ARG B 83 1 6 HELIX 9 9 GLY B 103 ALA B 108 1 6 HELIX 10 10 PRO B 109 LEU B 111 5 3 HELIX 11 11 GLY B 152 LEU B 166 1 15 HELIX 12 12 SER C 49 ILE C 63 1 15 HELIX 13 13 ASN C 66 ALA C 76 1 11 HELIX 14 14 PRO C 78 ARG C 83 1 6 HELIX 15 15 GLY C 103 ALA C 108 1 6 HELIX 16 16 PRO C 109 LEU C 111 5 3 HELIX 17 17 SER D 49 ILE D 63 1 15 HELIX 18 18 ASN D 66 ALA D 76 1 11 HELIX 19 19 PRO D 78 ARG D 83 1 6 HELIX 20 20 GLY D 103 ALA D 108 1 6 HELIX 21 21 PRO D 109 LEU D 111 5 3 HELIX 22 22 SER E 49 ILE E 63 1 15 HELIX 23 23 ASN E 66 ALA E 76 1 11 HELIX 24 24 PRO E 78 ARG E 83 1 6 HELIX 25 25 GLY E 103 ALA E 108 1 6 HELIX 26 26 PRO E 109 LEU E 111 5 3 HELIX 27 27 GLY E 148 GLY E 152 5 5 HELIX 28 28 ASP E 154 HIS E 168 1 15 HELIX 29 29 SER F 49 ILE F 63 1 15 HELIX 30 30 ASN F 66 ALA F 76 1 11 HELIX 31 31 PRO F 78 ARG F 83 1 6 HELIX 32 32 GLY F 103 ALA F 108 1 6 HELIX 33 33 PRO F 109 LEU F 111 5 3 SHEET 1 AA 4 VAL A 85 VAL A 88 0 SHEET 2 AA 4 SER A 139 ILE A 145 -1 O LYS A 141 N VAL A 88 SHEET 3 AA 4 LYS A 126 THR A 133 -1 O TYR A 128 N THR A 144 SHEET 4 AA 4 TYR A 117 GLN A 121 -1 O ASP A 118 N GLY A 129 SHEET 1 BA 4 VAL B 85 VAL B 88 0 SHEET 2 BA 4 SER B 139 ILE B 145 -1 O LYS B 141 N VAL B 88 SHEET 3 BA 4 ARG B 125 THR B 133 -1 O TYR B 128 N THR B 144 SHEET 4 BA 4 TYR B 117 ASP B 122 -1 O ASP B 118 N GLY B 129 SHEET 1 CA 4 VAL C 85 VAL C 88 0 SHEET 2 CA 4 SER C 139 ILE C 145 -1 O LYS C 141 N VAL C 88 SHEET 3 CA 4 ARG C 125 THR C 133 -1 O TYR C 128 N THR C 144 SHEET 4 CA 4 TYR C 117 ASP C 122 -1 O ASP C 118 N GLY C 129 SHEET 1 DA 4 VAL D 85 VAL D 88 0 SHEET 2 DA 4 SER D 139 ILE D 145 -1 O LYS D 141 N VAL D 88 SHEET 3 DA 4 ARG D 125 THR D 133 -1 O TYR D 128 N THR D 144 SHEET 4 DA 4 TYR D 117 ASP D 122 -1 O ASP D 118 N GLY D 129 SHEET 1 EA 4 VAL E 85 ASP E 89 0 SHEET 2 EA 4 SER E 139 ILE E 145 -1 O LYS E 141 N VAL E 88 SHEET 3 EA 4 ARG E 125 THR E 133 -1 O TYR E 128 N THR E 144 SHEET 4 EA 4 TYR E 117 ASP E 122 -1 O ASP E 118 N GLY E 129 SHEET 1 FA 4 VAL F 85 ASP F 89 0 SHEET 2 FA 4 SER F 139 ILE F 145 -1 O LYS F 141 N VAL F 88 SHEET 3 FA 4 ARG F 125 THR F 133 -1 O TYR F 128 N THR F 144 SHEET 4 FA 4 TYR F 117 ASP F 122 -1 O ASP F 118 N GLY F 129 SITE 1 AC1 3 THR D 112 HIS D 115 HOH D3001 SITE 1 AC2 2 THR E 112 HIS E 115 SITE 1 AC3 3 THR C 112 HIS C 115 HOH C2013 SITE 1 AC4 4 THR B 112 LYS B 114 HIS B 115 HOH B3002 SITE 1 AC5 5 THR F 112 LYS F 114 HIS F 115 HOH F2003 SITE 2 AC5 5 HOH F3003 SITE 1 AC6 4 THR A 112 LYS A 114 HIS A 115 HOH A3004 SITE 1 AC7 2 THR C 133 THR D 133 SITE 1 AC8 2 THR E 133 THR F 133 SITE 1 AC9 2 THR A 133 THR B 133 CRYST1 107.772 80.014 101.977 90.00 90.00 90.00 P 21 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009806 0.00000 MTRIX1 1 0.070000 0.995000 -0.070000 7.84960 1 MTRIX2 1 0.990000 -0.077000 -0.117000 5.15500 1 MTRIX3 1 -0.122000 -0.062000 -0.991000 141.21254 1 MTRIX1 2 0.527540 -0.849500 0.006840 -0.49595 1 MTRIX2 2 0.849480 0.527580 0.005830 0.10939 1 MTRIX3 2 -0.008560 0.002740 0.999960 34.11854 1 MTRIX1 3 0.885820 0.459170 -0.066960 5.55003 1 MTRIX2 3 0.452740 -0.886870 -0.092150 0.13241 1 MTRIX3 3 -0.101700 0.051320 -0.993490 107.39598 1 MTRIX1 4 -0.500490 -0.865550 0.018290 -0.31278 1 MTRIX2 4 0.865690 -0.500570 -0.000240 -0.22044 1 MTRIX3 4 0.009370 0.015710 0.999830 68.19968 1 MTRIX1 5 0.823620 -0.562160 -0.075030 2.86134 1 MTRIX2 5 -0.567130 -0.817210 -0.102660 -2.97708 1 MTRIX3 5 -0.003600 0.127110 -0.991880 73.81616 1