HEADER TRANSFERASE 09-NOV-07 2VG8 TITLE CHARACTERIZATION AND ENGINEERING OF THE BIFUNCTIONAL N- AND O- TITLE 2 GLUCOSYLTRANSFERASE INVOLVED IN XENOBIOTIC METABOLISM IN PLANTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROQUINONE GLUCOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARBUTIN SYNTHASE, UGT72B1; COMPND 5 EC: 2.4.1.218; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TUNER; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-30A KEYWDS PLANT GLYCOSYLATION, N-GLUCOSYLTRANSFERASE, TRANSFERASE, N- KEYWDS 2 GLYCOSYLATION, GLYCOSYLTRANSFERASE, S-GLUCOSYLTRANSFERASE, O- KEYWDS 3 GLUCOSYLTRANSFERASE, UDP-GLUCOSE-DEPENDENT EXPDTA X-RAY DIFFRACTION AUTHOR M.BRAZIER-HICKS,W.A.OFFEN,M.C.GERSHATER,T.J.REVETT,E.K.LIM, AUTHOR 2 D.J.BOWLES,G.J.DAVIES,R.EDWARDS REVDAT 5 13-DEC-23 2VG8 1 REMARK REVDAT 4 24-FEB-09 2VG8 1 VERSN REVDAT 3 08-JAN-08 2VG8 1 JRNL REVDAT 2 25-DEC-07 2VG8 1 AUTHOR JRNL ATOM REVDAT 1 04-DEC-07 2VG8 0 SPRSDE 04-DEC-07 2VG8 2VCU JRNL AUTH M.BRAZIER-HICKS,W.A.OFFEN,M.C.GERSHATER,T.J.REVETT,E.K.LIM, JRNL AUTH 2 D.J.BOWLES,G.J.DAVIES,R.EDWARDS JRNL TITL CHARACTERIZATION AND ENGINEERING OF THE BIFUNCTIONAL N- AND JRNL TITL 2 O-GLUCOSYLTRANSFERASE INVOLVED IN XENOBIOTIC METABOLISM IN JRNL TITL 3 PLANTS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 20238 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 18077347 JRNL DOI 10.1073/PNAS.0706421104 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 44219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2361 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2714 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3599 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 357 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.28000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.118 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.090 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3855 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5253 ; 1.615 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 492 ; 5.930 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;36.150 ;23.608 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 628 ;13.020 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;17.100 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 591 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2909 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2039 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2645 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 326 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 77 ; 0.182 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2453 ; 1.042 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3885 ; 1.565 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 2.431 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1357 ; 3.536 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES 1-5, 250-254, 477-480 ARE DISORDERED. REMARK 4 REMARK 4 2VG8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1290034389. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47687 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2VCH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% (W/V) PEG 3350, 0.1M TRIS PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.20900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 250 REMARK 465 LYS A 251 REMARK 465 GLN A 252 REMARK 465 THR A 253 REMARK 465 GLU A 254 REMARK 465 ASN A 477 REMARK 465 GLY A 478 REMARK 465 ASN A 479 REMARK 465 HIS A 480 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 50 CA CB CG CD CE NZ REMARK 470 SER A 58 CB OG REMARK 470 LYS A 153 CE NZ REMARK 470 GLN A 321 CB CG CD OE1 NE2 REMARK 470 LYS A 337 NZ REMARK 470 LYS A 338 CD CE NZ REMARK 470 LYS A 424 CE NZ REMARK 470 LYS A 440 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 117 -166.06 -105.14 REMARK 500 PHE A 345 -41.08 72.49 REMARK 500 PHE A 345 -53.32 82.75 REMARK 500 PHE A 345 -55.42 77.84 REMARK 500 TYR A 386 -169.67 -161.75 REMARK 500 ALA A 387 -136.98 47.11 REMARK 500 ASP A 399 -63.90 -120.94 REMARK 500 GLU A 428 -13.75 -140.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A1477 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A1478 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1479 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1481 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1482 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1483 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1484 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1486 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1487 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VCE RELATED DB: PDB REMARK 900 CHARACTERIZATION AND ENGINEERING OF THE BIFUNCTIONAL N- AND O- REMARK 900 GLUCOSYLTRANSFERASE INVOLVED IN XENOBIOTIC METABOLISM IN PLANTS REMARK 900 RELATED ID: 2VCH RELATED DB: PDB REMARK 900 CHARACTERIZATION AND ENGINEERING OF THE BIFUNCTIONAL N- AND O- REMARK 900 GLUCOSYLTRANSFERASE INVOLVED IN XENOBIOTIC METABOLISM IN PLANTS REMARK 900 RELATED ID: 2VCU RELATED DB: PDB REMARK 900 CHARACTERIZATION AND ENGINEERING OF THE BIFUNCTIONAL N- AND O- REMARK 900 GLUCOSYLTRANSFERASE INVOLVED IN XENOBIOTIC METABOLISM IN PLANTS DBREF 2VG8 A 1 480 UNP Q9M156 HQGT_ARATH 1 480 SEQRES 1 A 480 MET GLU GLU SER LYS THR PRO HIS VAL ALA ILE ILE PRO SEQRES 2 A 480 SER PRO GLY MET GLY HIS LEU ILE PRO LEU VAL GLU PHE SEQRES 3 A 480 ALA LYS ARG LEU VAL HIS LEU HIS GLY LEU THR VAL THR SEQRES 4 A 480 PHE VAL ILE ALA GLY GLU GLY PRO PRO SER LYS ALA GLN SEQRES 5 A 480 ARG THR VAL LEU ASP SER LEU PRO SER SER ILE SER SER SEQRES 6 A 480 VAL PHE LEU PRO PRO VAL ASP LEU THR ASP LEU SER SER SEQRES 7 A 480 SER THR ARG ILE GLU SER ARG ILE SER LEU THR VAL THR SEQRES 8 A 480 ARG SER ASN PRO GLU LEU ARG LYS VAL PHE ASP SER PHE SEQRES 9 A 480 VAL GLU GLY GLY ARG LEU PRO THR ALA LEU VAL VAL ASP SEQRES 10 A 480 LEU PHE GLY THR ASP ALA PHE ASP VAL ALA VAL GLU PHE SEQRES 11 A 480 HIS VAL PRO PRO TYR ILE PHE TYR PRO THR THR ALA ASN SEQRES 12 A 480 VAL LEU SER PHE PHE LEU HIS LEU PRO LYS LEU ASP GLU SEQRES 13 A 480 THR VAL SER CYS GLU PHE ARG GLU LEU THR GLU PRO LEU SEQRES 14 A 480 MET LEU PRO GLY CYS VAL PRO VAL ALA GLY LYS ASP PHE SEQRES 15 A 480 LEU ASP PRO ALA GLN ASP ARG LYS ASP ASP ALA TYR LYS SEQRES 16 A 480 TRP LEU LEU HIS ASN THR LYS ARG TYR LYS GLU ALA GLU SEQRES 17 A 480 GLY ILE LEU VAL ASN THR PHE PHE GLU LEU GLU PRO ASN SEQRES 18 A 480 ALA ILE LYS ALA LEU GLN GLU PRO GLY LEU ASP LYS PRO SEQRES 19 A 480 PRO VAL TYR PRO VAL GLY PRO LEU VAL ASN ILE GLY LYS SEQRES 20 A 480 GLN GLU ALA LYS GLN THR GLU GLU SER GLU CYS LEU LYS SEQRES 21 A 480 TRP LEU ASP ASN GLN PRO LEU GLY SER VAL LEU TYR VAL SEQRES 22 A 480 SER PHE GLY SER GLY GLY THR LEU THR CYS GLU GLN LEU SEQRES 23 A 480 ASN GLU LEU ALA LEU GLY LEU ALA ASP SER GLU GLN ARG SEQRES 24 A 480 PHE LEU TRP VAL ILE ARG SER PRO SER GLY ILE ALA ASN SEQRES 25 A 480 SER SER TYR PHE ASP SER HIS SER GLN THR ASP PRO LEU SEQRES 26 A 480 THR PHE LEU PRO PRO GLY PHE LEU GLU ARG THR LYS LYS SEQRES 27 A 480 ARG GLY PHE VAL ILE PRO PHE TRP ALA PRO GLN ALA GLN SEQRES 28 A 480 VAL LEU ALA HIS PRO SER THR GLY GLY PHE LEU THR HIS SEQRES 29 A 480 CYS GLY TRP ASN SER THR LEU GLU SER VAL VAL SER GLY SEQRES 30 A 480 ILE PRO LEU ILE ALA TRP PRO LEU TYR ALA GLU GLN LYS SEQRES 31 A 480 MET ASN ALA VAL LEU LEU SER GLU ASP ILE ARG ALA ALA SEQRES 32 A 480 LEU ARG PRO ARG ALA GLY ASP ASP GLY LEU VAL ARG ARG SEQRES 33 A 480 GLU GLU VAL ALA ARG VAL VAL LYS GLY LEU MET GLU GLY SEQRES 34 A 480 GLU GLU GLY LYS GLY VAL ARG ASN LYS MET LYS GLU LEU SEQRES 35 A 480 LYS GLU ALA ALA CYS ARG VAL LEU LYS ASP ASP GLY THR SEQRES 36 A 480 SER THR LYS ALA LEU SER LEU VAL ALA LEU LYS TRP LYS SEQRES 37 A 480 ALA HIS LYS LYS GLU LEU GLU GLN ASN GLY ASN HIS HET UDP A1477 25 HET TRS A1478 8 HET EDO A1479 4 HET EDO A1480 4 HET EDO A1481 4 HET EDO A1482 4 HET EDO A1483 4 HET EDO A1484 4 HET EDO A1485 4 HET EDO A1486 4 HET EDO A1487 4 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM EDO 1,2-ETHANEDIOL HETSYN TRS TRIS BUFFER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 UDP C9 H14 N2 O12 P2 FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 EDO 9(C2 H6 O2) FORMUL 13 HOH *357(H2 O) HELIX 1 1 GLY A 16 GLY A 35 1 20 HELIX 2 2 ALA A 51 ASP A 57 1 7 HELIX 3 3 ARG A 81 ARG A 92 1 12 HELIX 4 4 SER A 93 GLY A 107 1 15 HELIX 5 5 GLY A 120 ASP A 122 5 3 HELIX 6 6 ALA A 123 PHE A 130 1 8 HELIX 7 7 THR A 141 VAL A 158 1 18 HELIX 8 8 GLU A 161 LEU A 165 5 5 HELIX 9 9 ALA A 178 PHE A 182 5 5 HELIX 10 10 LEU A 183 GLN A 187 5 5 HELIX 11 11 ASP A 191 TYR A 204 1 14 HELIX 12 12 LYS A 205 ALA A 207 5 3 HELIX 13 13 GLU A 219 GLU A 228 1 10 HELIX 14 14 GLU A 255 ASN A 264 1 10 HELIX 15 15 THR A 282 GLU A 297 1 16 HELIX 16 16 ASP A 323 LEU A 328 5 6 HELIX 17 17 GLY A 331 THR A 336 1 6 HELIX 18 18 PRO A 348 ALA A 354 1 7 HELIX 19 19 GLY A 366 SER A 376 1 11 HELIX 20 20 GLU A 388 ASP A 399 1 12 HELIX 21 21 ARG A 415 GLU A 428 1 14 HELIX 22 22 GLU A 430 LEU A 450 1 21 HELIX 23 23 GLY A 454 GLN A 476 1 23 SHEET 1 AA 7 ILE A 63 PHE A 67 0 SHEET 2 AA 7 THR A 37 ILE A 42 1 O VAL A 38 N SER A 64 SHEET 3 AA 7 HIS A 8 ILE A 12 1 O VAL A 9 N THR A 39 SHEET 4 AA 7 ALA A 113 VAL A 116 1 O ALA A 113 N ALA A 10 SHEET 5 AA 7 PRO A 134 TYR A 138 1 O TYR A 135 N VAL A 116 SHEET 6 AA 7 GLY A 209 VAL A 212 1 O GLY A 209 N ILE A 136 SHEET 7 AA 7 VAL A 236 PRO A 238 1 O TYR A 237 N VAL A 212 SHEET 1 AB 6 GLY A 340 PRO A 344 0 SHEET 2 AB 6 ARG A 299 ILE A 304 1 O PHE A 300 N PHE A 341 SHEET 3 AB 6 VAL A 270 SER A 274 1 O LEU A 271 N LEU A 301 SHEET 4 AB 6 THR A 358 THR A 363 1 N GLY A 359 O VAL A 270 SHEET 5 AB 6 LEU A 380 ALA A 382 1 O ILE A 381 N THR A 363 SHEET 6 AB 6 ALA A 403 LEU A 404 1 O LEU A 404 N ALA A 382 CISPEP 1 GLY A 240 PRO A 241 0 0.15 SITE 1 AC1 21 GLY A 18 ILE A 21 GLY A 276 SER A 277 SITE 2 AC1 21 VAL A 303 TRP A 346 ALA A 347 GLN A 349 SITE 3 AC1 21 HIS A 364 GLY A 366 TRP A 367 ASN A 368 SITE 4 AC1 21 SER A 369 GLU A 372 TYR A 386 TRS A1478 SITE 5 AC1 21 HOH A2006 HOH A2223 HOH A2275 HOH A2350 SITE 6 AC1 21 HOH A2353 SITE 1 AC2 12 GLY A 18 HIS A 19 PRO A 139 GLY A 366 SITE 2 AC2 12 TRP A 367 ALA A 387 GLU A 388 UDP A1477 SITE 3 AC2 12 EDO A1480 HOH A2007 HOH A2351 HOH A2353 SITE 1 AC3 6 TRP A 383 PRO A 384 VAL A 414 HOH A2291 SITE 2 AC3 6 HOH A2297 HOH A2352 SITE 1 AC4 6 HIS A 19 ILE A 86 TYR A 315 ALA A 387 SITE 2 AC4 6 TRS A1478 HOH A2353 SITE 1 AC5 8 PHE A 275 THR A 280 LEU A 281 TRP A 302 SITE 2 AC5 8 VAL A 303 ILE A 304 ARG A 305 HOH A2354 SITE 1 AC6 5 HIS A 34 LEU A 328 PRO A 330 SER A 461 SITE 2 AC6 5 LYS A 468 SITE 1 AC7 10 ILE A 42 ALA A 43 GLY A 44 GLY A 46 SITE 2 AC7 10 PHE A 67 LEU A 68 PRO A 69 PRO A 70 SITE 3 AC7 10 EDO A1484 HOH A2355 SITE 1 AC8 6 GLY A 46 PRO A 47 PRO A 70 EDO A1483 SITE 2 AC8 6 HOH A2026 HOH A2355 SITE 1 AC9 4 SER A 159 GLU A 161 LYS A 443 CYS A 447 SITE 1 BC1 7 PRO A 152 LYS A 202 LYS A 205 GLU A 334 SITE 2 BC1 7 ARG A 335 HOH A2247 HOH A2356 SITE 1 BC2 5 GLY A 173 ASN A 221 ASP A 399 HOH A2281 SITE 2 BC2 5 HOH A2357 CRYST1 47.642 94.418 56.676 90.00 110.35 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020990 0.000000 0.007785 0.00000 SCALE2 0.000000 0.010591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018819 0.00000