HEADER UNKNOWN FUNCTION 17-NOV-07 2VH3 TITLE RANASMURFIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RANASMURFIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RSF-1; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RANASMURFIN; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: RSF-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POLYPEDATES LEUCOMYSTAX; SOURCE 3 ORGANISM_COMMON: JAVA WHIPPING FROG; SOURCE 4 ORGANISM_TAXID: 68444; SOURCE 5 OTHER_DETAILS: FROM FROG NESTS; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: POLYPEDATES LEUCOMYSTAX; SOURCE 8 ORGANISM_COMMON: JAVA WHIPPING FROG; SOURCE 9 ORGANISM_TAXID: 68444; SOURCE 10 OTHER_DETAILS: FROM FROG NESTS KEYWDS LTQ, BISLTQ, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.OKE,R.T.CHING,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON, AUTHOR 2 C.BLOCH JUNIOR,C.H.BOTTING,M.A.WALSH,A.A.LATIFF, AUTHOR 3 M.W.KENNEDY,A.COOPER,J.H.NAISMITH REVDAT 7 31-AUG-11 2VH3 1 REMARK HETNAM HETSYN VERSN REVDAT 6 24-NOV-09 2VH3 1 VERSN REVDAT 5 24-FEB-09 2VH3 1 VERSN REVDAT 4 07-OCT-08 2VH3 1 JRNL REVDAT 3 23-SEP-08 2VH3 1 AUTHOR JRNL REMARK MASTER REVDAT 2 08-APR-08 2VH3 1 AUTHOR ATOM ANISOU REVDAT 1 04-DEC-07 2VH3 0 JRNL AUTH M.OKE,R.T.CHING,L.G.CARTER,K.A.JOHNSON,H.LIU, JRNL AUTH 2 S.A.MCMAHON,M.F.WHITE,C.BLOCH JR,C.H.BOTTING, JRNL AUTH 3 M.A.WALSH,A.A.LATIFF,M.W.KENNEDY,A.COOPER, JRNL AUTH 4 J.H.NAISMITH JRNL TITL UNUSUAL CHROMOPHORE AND CROSS-LINKS IN JRNL TITL 2 RANASMURFIN: A BLUE PROTEIN FROM THE FOAM NESTS OF JRNL TITL 3 A TROPICAL FROG. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 47 7853 2008 JRNL REFN ISSN 1433-7851 JRNL PMID 18781570 JRNL DOI 10.1002/ANIE.200802901 REMARK 2 REMARK 2 RESOLUTION. 1.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 65500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3499 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3650 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3720 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1745 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.67000 REMARK 3 B22 (A**2) : 1.80000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.73000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.050 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.254 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1883 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1312 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2544 ; 1.293 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3204 ; 0.851 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 233 ; 4.894 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;31.032 ;25.116 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 333 ;13.131 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 7.994 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 258 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2083 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 358 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 498 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1438 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 934 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 917 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 140 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.222 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 78 ; 0.199 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.294 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1479 ; 1.333 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1808 ; 1.579 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 894 ; 2.491 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 727 ; 3.194 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 66 A 100 6 REMARK 3 1 B 66 B 100 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 466 ; 0.82 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 466 ; 0.82 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 466 ; 1.47 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 466 ; 1.47 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 8 6 REMARK 3 1 B 2 B 8 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 2 A (A): 95 ; 0.18 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 B (A): 95 ; 0.18 ; 5.00 REMARK 3 LOOSE THERMAL 2 A (A**2): 95 ; 0.99 ; 10.00 REMARK 3 LOOSE THERMAL 2 B (A**2): 95 ; 0.99 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 10 A 64 6 REMARK 3 1 B 10 B 64 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 3 A (A): 767 ; 0.45 ; 5.00 REMARK 3 LOOSE POSITIONAL 3 B (A): 767 ; 0.45 ; 5.00 REMARK 3 LOOSE THERMAL 3 A (A**2): 767 ; 1.16 ; 10.00 REMARK 3 LOOSE THERMAL 3 B (A**2): 767 ; 1.16 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1310 19.9510 45.0880 REMARK 3 T TENSOR REMARK 3 T11: -0.0244 T22: 0.0024 REMARK 3 T33: -0.0542 T12: 0.0019 REMARK 3 T13: 0.0236 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.0264 L22: 0.3341 REMARK 3 L33: 1.1754 L12: 0.0971 REMARK 3 L13: -0.5209 L23: -0.0095 REMARK 3 S TENSOR REMARK 3 S11: -0.0231 S12: -0.0528 S13: -0.0832 REMARK 3 S21: 0.0048 S22: 0.0189 S23: -0.0056 REMARK 3 S31: 0.0359 S32: -0.0804 S33: 0.0042 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 92 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8160 26.9210 26.4780 REMARK 3 T TENSOR REMARK 3 T11: -0.0229 T22: -0.0007 REMARK 3 T33: -0.0473 T12: 0.0033 REMARK 3 T13: 0.0244 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.2691 L22: 0.3668 REMARK 3 L33: 0.9227 L12: -0.0626 REMARK 3 L13: -0.3004 L23: -0.1312 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: 0.0411 S13: -0.0068 REMARK 3 S21: -0.0123 S22: -0.0487 S23: -0.0379 REMARK 3 S31: -0.0157 S32: -0.0075 S33: 0.0433 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 112 REMARK 3 RESIDUE RANGE : B 93 B 113 REMARK 3 RESIDUE RANGE : A 1113 A 1113 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3690 23.8960 35.8190 REMARK 3 T TENSOR REMARK 3 T11: -0.0237 T22: -0.0013 REMARK 3 T33: -0.0581 T12: -0.0061 REMARK 3 T13: 0.0127 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.0041 L22: 1.2454 REMARK 3 L33: 0.5732 L12: 0.3190 REMARK 3 L13: 0.0883 L23: 0.4598 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: -0.0365 S13: -0.0098 REMARK 3 S21: 0.0206 S22: -0.0035 S23: -0.0464 REMARK 3 S31: -0.0063 S32: -0.0272 S33: 0.0258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS.THE SEQUENCE IS FROM X-RAY STRUCTURE. REMARK 4 REMARK 4 2VH3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-07. REMARK 100 THE PDBE ID CODE IS EBI-34457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65500 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.16 REMARK 200 RESOLUTION RANGE LOW (A) : 44.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 3.8 REMARK 200 R MERGE (I) : 0.04 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.0 REMARK 200 DATA REDUNDANCY IN SHELL : 80 REMARK 200 R MERGE FOR SHELL (I) : 0.63 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.83500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 30 CD1 TYR B 108 1.38 REMARK 500 OE2 GLU A 20 NZ LYS A 24 2.09 REMARK 500 OG1 FGL B 9 OD CSO B 65 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ARG B 94 O2 GOL B 1117 2546 2.06 REMARK 500 O HOH B 2060 O HOH B 2080 2546 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 88.70 -158.23 REMARK 500 TY2 A 108 70.69 -119.14 REMARK 500 ASP B 45 85.11 -156.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 THE CHROMOPHORE IN THIS ENTRY IS FORMED BY 4 RESIDUES ACROSS REMARK 600 CHAINS A AND B. REMARK 600 LYS (A30)-TY2 (A108)-TYR (B108)-LYS (B30) COORDINATED BY A REMARK 600 ZINC MOLECULE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1113 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 112 NE2 REMARK 620 2 TY2 A 108 NE2 121.5 REMARK 620 3 TYR B 108 OH 90.9 75.9 REMARK 620 4 HIS B 112 NE2 121.5 116.2 94.2 REMARK 620 5 TY2 A 108 OH 103.3 78.0 153.9 96.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1115 DBREF 2VH3 A 1 113 UNP P85511 RANSM_POLLE 1 113 DBREF 2VH3 B 1 113 UNP P85511 RANSM_POLLE 1 113 SEQRES 1 A 113 ALA DAH ALA CYS SER PHE PRO PRO SER GLU ILE PRO GLY SEQRES 2 A 113 SER LYS GLU CYS LEU ALA GLU ALA LEU GLN LYS HIS GLN SEQRES 3 A 113 GLY PHE LYS LYS LYS SER TYR ALA LEU ILE CYS ALA TYR SEQRES 4 A 113 LEU ASN TYR LYS GLU ASP ALA GLU ASN TYR GLU ARG ALA SEQRES 5 A 113 ALA GLU ASP PHE ASP SER ALA VAL LYS CYS THR GLY CYS SEQRES 6 A 113 LYS GLU GLY VAL ASP LEU HIS GLU GLY ASN PRO GLU LEU SEQRES 7 A 113 ILE GLU GLU GLY PHE GLU LYS PHE LEU ALA SER LEU LYS SEQRES 8 A 113 ILE ASP ARG LYS ALA LEU GLY SER LEU CYS THR LEU PHE SEQRES 9 A 113 GLN LYS LEU TY2 ALA ILE PRO HIS ASN SEQRES 1 B 113 ALA DAH ALA CYS SER PHE PRO PRO FGL GLU ILE PRO GLY SEQRES 2 B 113 SER LYS GLU CYS LEU ALA GLU ALA LEU GLN LYS HIS GLN SEQRES 3 B 113 GLY PHE LYS LYS LYS SER TYR ALA LEU ILE CYS ALA TYR SEQRES 4 B 113 LEU ASN TYR LYS GLU ASP ALA GLU ASN TYR GLU ARG ALA SEQRES 5 B 113 ALA GLU ASP PHE ASP SER ALA VAL LYS CYS THR GLY CSO SEQRES 6 B 113 LYS GLU GLY VAL ASP LEU HIS GLU GLY ASN PRO GLU LEU SEQRES 7 B 113 ILE GLU GLU GLY PHE GLU LYS PHE LEU ALA SER LEU LYS SEQRES 8 B 113 ILE ASP ARG LYS ALA LEU GLY SER LEU CYS THR LEU PHE SEQRES 9 B 113 GLN LYS LEU TYR ALA ILE PRO HIS ASN MODRES 2VH3 DAH A 2 PHE 3-HYDROXY-L-TYROSINE MODRES 2VH3 DAH B 2 PHE 3-HYDROXY-L-TYROSINE MODRES 2VH3 TY2 A 108 TYR 3-AMINO-L-TYROSINE MODRES 2VH3 FGL B 9 GLY 2-AMINOPROPANEDIOIC ACID MODRES 2VH3 CSO B 65 CYS S-HYDROXYCYSTEINE HET DAH A 2 13 HET DAH B 2 13 HET TY2 A 108 13 HET FGL B 9 7 HET CSO B 65 7 HET ZN A1113 1 HET SO4 B1114 5 HET SO4 A1114 5 HET SO4 B1115 5 HET SO4 B1116 5 HET GOL B1117 6 HET GOL A1115 6 HETNAM DAH 3,4-DIHYDROXYPHENYLALANINE HETNAM TY2 3-AMINO-L-TYROSINE HETNAM CSO S-HYDROXYCYSTEINE HETNAM FGL 2-AMINOPROPANEDIOIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN DAH L-DOPA HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 DAH 2(C9 H11 N O4) FORMUL 4 TY2 C9 H12 N2 O3 FORMUL 5 CSO C3 H7 N O3 S FORMUL 6 FGL C3 H5 N O4 FORMUL 7 SO4 4(O4 S 2-) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 9 ZN ZN 2+ FORMUL 10 HOH *184(H2 O) HELIX 1 1 GLU A 16 HIS A 25 1 10 HELIX 2 2 HIS A 25 ASN A 41 1 17 HELIX 3 3 TYR A 42 GLU A 44 5 3 HELIX 4 4 ASP A 45 GLY A 64 1 20 HELIX 5 5 ASN A 75 GLU A 77 5 3 HELIX 6 6 LEU A 78 LYS A 91 1 14 HELIX 7 7 ASP A 93 LYS A 95 5 3 HELIX 8 8 ALA A 96 PHE A 104 1 9 HELIX 9 9 GLU B 16 HIS B 25 1 10 HELIX 10 10 HIS B 25 ASN B 41 1 17 HELIX 11 11 TYR B 42 GLU B 44 5 3 HELIX 12 12 ASP B 45 GLY B 64 1 20 HELIX 13 13 LEU B 78 LEU B 90 1 13 HELIX 14 14 ALA B 96 TYR B 108 1 13 SSBOND 1 CYS A 4 CYS A 62 1555 1555 2.03 SSBOND 2 CYS A 17 CYS A 65 1555 1555 2.03 SSBOND 3 CYS A 37 CYS A 101 1555 1555 2.06 SSBOND 4 CYS B 4 CYS B 62 1555 1555 2.03 SSBOND 5 CYS B 37 CYS B 101 1555 1555 2.06 LINK C ALA A 1 N DAH A 2 1555 1555 1.33 LINK C DAH A 2 N ALA A 3 1555 1555 1.32 LINK CD1 DAH A 2 NZ LYS A 31 1555 1555 1.35 LINK NZ LYS A 30 CD1 TY2 A 108 1555 1555 1.39 LINK C LEU A 107 N TY2 A 108 1555 1555 1.33 LINK C TY2 A 108 N ALA A 109 1555 1555 1.33 LINK ZN ZN A1113 OH TY2 A 108 1555 1555 2.03 LINK ZN ZN A1113 NE2 HIS A 112 1555 1555 2.06 LINK ZN ZN A1113 NE2 HIS B 112 1555 1555 2.06 LINK ZN ZN A1113 NE2 TY2 A 108 1555 1555 1.99 LINK ZN ZN A1113 OH TYR B 108 1555 1555 2.05 LINK C ALA B 1 N DAH B 2 1555 1555 1.33 LINK CD1 DAH B 2 NZ LYS B 31 1555 1555 1.38 LINK C DAH B 2 N ALA B 3 1555 1555 1.33 LINK C PRO B 8 N FGL B 9 1555 1555 1.34 LINK C FGL B 9 N GLU B 10 1555 1555 1.33 LINK SG CYS B 17 SG CSO B 65 1555 1555 2.03 LINK C GLY B 64 N CSO B 65 1555 1555 1.33 LINK C CSO B 65 N LYS B 66 1555 1555 1.33 LINK CE2 TYR B 108 NE2 TY2 A 108 1555 1555 1.32 CISPEP 1 ILE A 110 PRO A 111 0 -7.57 CISPEP 2 ILE B 110 PRO B 111 0 -8.91 SITE 1 AC1 4 TY2 A 108 HIS A 112 TYR B 108 HIS B 112 SITE 1 AC2 5 GLN A 23 LYS A 24 ILE B 92 ARG B 94 SITE 2 AC2 5 LYS B 95 SITE 1 AC3 7 HIS A 72 ASN A 75 LEU A 78 HOH A2100 SITE 2 AC3 7 HOH A2101 HOH A2102 HOH A2103 SITE 1 AC4 3 LYS B 43 HOH B2076 HOH B2077 SITE 1 AC5 5 HIS B 72 ASN B 75 LEU B 78 HOH B2078 SITE 2 AC5 5 HOH B2079 SITE 1 AC6 6 CYS B 4 PHE B 6 PRO B 7 PRO B 8 SITE 2 AC6 6 CYS B 62 HOH B2080 SITE 1 AC7 8 GLY A 98 CYS A 101 THR A 102 HOH A2104 SITE 2 AC7 8 LEU B 40 GLY B 98 CYS B 101 THR B 102 CRYST1 40.990 59.670 44.900 90.00 93.31 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024396 0.000000 0.001411 0.00000 SCALE2 0.000000 0.016759 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022309 0.00000