HEADER OXIDOREDUCTASE 26-NOV-07 2VHX TITLE CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF L-ALANINE DEHYDROGENASE TITLE 2 FROM MYCOBACTERIUM TUBERCULOSIS WITH NAD+ AND PYRUVATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANINE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: 40 KDA ANTIGEN, TB43; COMPND 5 EC: 1.4.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET26 KEYWDS NAD, SECRETED, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.AGREN,G.SCHNEIDER REVDAT 4 15-NOV-23 2VHX 1 LINK ATOM REVDAT 3 24-FEB-09 2VHX 1 VERSN REVDAT 2 11-NOV-08 2VHX 1 COMPND SOURCE JRNL REMARK REVDAT 2 2 1 SITE MASTER REVDAT 1 11-MAR-08 2VHX 0 JRNL AUTH D.AGREN,M.STEHR,C.L.BERTHOLD,S.KAPOOR,W.OEHLMANN,M.SINGH, JRNL AUTH 2 G.SCHNEIDER JRNL TITL THREE-DIMENSIONAL STRUCTURES OF APO- AND HOLO-L-ALANINE JRNL TITL 2 DEHYDROGENASE FROM MYCOBACTERIUM TUBERCULOSIS REVEAL JRNL TITL 3 CONFORMATIONAL CHANGES UPON COENZYME BINDING. JRNL REF J.MOL.BIOL. V. 377 1161 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18304579 JRNL DOI 10.1016/J.JMB.2008.01.091 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 172817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9182 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 479 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 16260 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 1276 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.15000 REMARK 3 B22 (A**2) : -1.38000 REMARK 3 B33 (A**2) : 2.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.073 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16762 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 22857 ; 1.645 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 2224 ; 6.227 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 637 ;34.870 ;23.344 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2561 ;17.172 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 117 ;19.565 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2697 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12657 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 8144 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 11411 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1220 ; 0.141 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.207 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.224 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 11248 ; 0.884 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 17538 ; 1.373 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6129 ; 2.518 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5310 ; 3.864 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. CHAIN A RESIDUES 241-245 ARE MISSING. CHAIN B REMARK 3 RESIDUES 240-244 ARE MISSING. CHAIN C RESIDUES 241-246 ARE REMARK 3 MISSING. CHAIN D RESIDUES 240-244 ARE MISSING. THE PYRUVATE REMARK 3 BOUND IN CHAIN E AND F ARE NOT BOUND AT FULL OCCUPANCY, SEE THE REMARK 3 PAPER IN REFERENCES FOR FURTHER EXPLANATIONS. REMARK 4 REMARK 4 2VHX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1290034558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 182162 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 88.12350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 85.88350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 88.12350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 85.88350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 24270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 89990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 HIS A 372 REMARK 465 HIS A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 VAL B 241 REMARK 465 PRO B 242 REMARK 465 GLY B 243 REMARK 465 HIS B 372 REMARK 465 HIS B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 VAL C 241 REMARK 465 PRO C 242 REMARK 465 GLY C 243 REMARK 465 ALA C 244 REMARK 465 LYS C 245 REMARK 465 ALA C 371 REMARK 465 HIS C 372 REMARK 465 HIS C 373 REMARK 465 HIS C 374 REMARK 465 HIS C 375 REMARK 465 HIS C 376 REMARK 465 HIS C 377 REMARK 465 VAL D 241 REMARK 465 PRO D 242 REMARK 465 GLY D 243 REMARK 465 ALA D 371 REMARK 465 HIS D 372 REMARK 465 HIS D 373 REMARK 465 HIS D 374 REMARK 465 HIS D 375 REMARK 465 HIS D 376 REMARK 465 HIS D 377 REMARK 465 HIS E 374 REMARK 465 HIS E 375 REMARK 465 HIS E 376 REMARK 465 HIS E 377 REMARK 465 HIS F 374 REMARK 465 HIS F 375 REMARK 465 HIS F 376 REMARK 465 HIS F 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 168 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 CYS A 297 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 LEU B 264 CA - CB - CG ANGL. DEV. = 17.9 DEGREES REMARK 500 LEU C 264 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 ALA D 246 N - CA - C ANGL. DEV. = -23.5 DEGREES REMARK 500 LEU D 264 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU E 197 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 LEU E 264 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 ARG E 334 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG F 330 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 270 8.12 -69.62 REMARK 500 GLN A 271 45.24 -156.17 REMARK 500 HIS A 291 -131.19 49.97 REMARK 500 HIS A 346 117.67 -164.96 REMARK 500 GLN B 271 44.22 -148.46 REMARK 500 HIS B 291 -125.56 49.06 REMARK 500 LEU B 370 40.94 -83.07 REMARK 500 HIS C 291 -129.34 53.39 REMARK 500 LYS D 245 153.92 159.53 REMARK 500 ASP D 270 11.86 -67.23 REMARK 500 GLN D 271 19.91 -154.72 REMARK 500 HIS D 291 -134.48 57.10 REMARK 500 ASP D 292 31.87 -94.91 REMARK 500 HIS D 346 115.62 -165.78 REMARK 500 ALA E 238 33.92 -141.87 REMARK 500 HIS E 291 -121.43 43.46 REMARK 500 CYS F 212 51.67 32.94 REMARK 500 HIS F 291 -128.05 50.53 REMARK 500 ASP F 292 31.89 -98.60 REMARK 500 SER F 344 -51.68 -124.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS D 245 ALA D 246 -63.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1372 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1372 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F1374 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR F1375 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR E1374 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B1373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR D1371 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A1373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR C1371 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD E1375 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD F1376 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VHV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE D270A MUTANT OF L-ALANINE DEHYDROGENASE REMARK 900 FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH NADH. REMARK 900 RELATED ID: 2VHW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HOLO L-ALANINE DEHYDROGENASE FROM REMARK 900 MYCOBACTERIUM TUBERCULOSIS IN THE OPEN AND CLOSED CONFORMATION REMARK 900 RELATED ID: 2VHY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF APO L-ALANINE DEHYDROGENASE FROM MYCOBACTERIUM REMARK 900 TUBERCULOSIS REMARK 900 RELATED ID: 2VHZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HOLO L-ALANINE DEHYDROGENASE FROM REMARK 900 MYCOBACTERIUM TUBERCULOSIS IN THE CLOSED CONFORMATION REMARK 999 REMARK 999 SEQUENCE REMARK 999 EXPRESSED WITH A C-TERMINAL 6XHIS TAG. DBREF 2VHX A 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX A 372 377 PDB 2VHX 2VHX 372 377 DBREF 2VHX B 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX B 372 377 PDB 2VHX 2VHX 372 377 DBREF 2VHX C 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX C 372 377 PDB 2VHX 2VHX 372 377 DBREF 2VHX D 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX D 372 377 PDB 2VHX 2VHX 372 377 DBREF 2VHX E 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX E 372 377 PDB 2VHX 2VHX 372 377 DBREF 2VHX F 1 371 UNP P30234 DHA_MYCTU 1 371 DBREF 2VHX F 372 377 PDB 2VHX 2VHX 372 377 SEQRES 1 A 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 A 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 A 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 A 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 A 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 A 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 A 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 A 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 A 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 A 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 A 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 A 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 A 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 A 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 A 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 A 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 A 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 A 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 A 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 A 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 A 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 A 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 A 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 A 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 A 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 A 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 A 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 A 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 A 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 B 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 B 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 B 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 B 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 B 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 B 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 B 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 B 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 B 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 B 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 B 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 B 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 B 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 B 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 B 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 B 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 B 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 B 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 B 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 B 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 B 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 B 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 B 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 B 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 B 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 B 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 B 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 B 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS SEQRES 1 C 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 C 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 C 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 C 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 C 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 C 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 C 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 C 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 C 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 C 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 C 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 C 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 C 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 C 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 C 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 C 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 C 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 C 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 C 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 C 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 C 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 C 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 C 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 C 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 C 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 C 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 C 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 C 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 C 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS SEQRES 1 D 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 D 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 D 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 D 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 D 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 D 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 D 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 D 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 D 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 D 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 D 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 D 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 D 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 D 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 D 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 D 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 D 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 D 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 D 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 D 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 D 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 D 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 D 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 D 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 D 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 D 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 D 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 D 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 D 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS SEQRES 1 E 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 E 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 E 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 E 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 E 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 E 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 E 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 E 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 E 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 E 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 E 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 E 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 E 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 E 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 E 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 E 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 E 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 E 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 E 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 E 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 E 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 E 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 E 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 E 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 E 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 E 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 E 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 E 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 E 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS SEQRES 1 F 377 MET ARG VAL GLY ILE PRO THR GLU THR LYS ASN ASN GLU SEQRES 2 F 377 PHE ARG VAL ALA ILE THR PRO ALA GLY VAL ALA GLU LEU SEQRES 3 F 377 THR ARG ARG GLY HIS GLU VAL LEU ILE GLN ALA GLY ALA SEQRES 4 F 377 GLY GLU GLY SER ALA ILE THR ASP ALA ASP PHE LYS ALA SEQRES 5 F 377 ALA GLY ALA GLN LEU VAL GLY THR ALA ASP GLN VAL TRP SEQRES 6 F 377 ALA ASP ALA ASP LEU LEU LEU LYS VAL LYS GLU PRO ILE SEQRES 7 F 377 ALA ALA GLU TYR GLY ARG LEU ARG HIS GLY GLN ILE LEU SEQRES 8 F 377 PHE THR PHE LEU HIS LEU ALA ALA SER ARG ALA CYS THR SEQRES 9 F 377 ASP ALA LEU LEU ASP SER GLY THR THR SER ILE ALA TYR SEQRES 10 F 377 GLU THR VAL GLN THR ALA ASP GLY ALA LEU PRO LEU LEU SEQRES 11 F 377 ALA PRO MET SER GLU VAL ALA GLY ARG LEU ALA ALA GLN SEQRES 12 F 377 VAL GLY ALA TYR HIS LEU MET ARG THR GLN GLY GLY ARG SEQRES 13 F 377 GLY VAL LEU MET GLY GLY VAL PRO GLY VAL GLU PRO ALA SEQRES 14 F 377 ASP VAL VAL VAL ILE GLY ALA GLY THR ALA GLY TYR ASN SEQRES 15 F 377 ALA ALA ARG ILE ALA ASN GLY MET GLY ALA THR VAL THR SEQRES 16 F 377 VAL LEU ASP ILE ASN ILE ASP LYS LEU ARG GLN LEU ASP SEQRES 17 F 377 ALA GLU PHE CYS GLY ARG ILE HIS THR ARG TYR SER SER SEQRES 18 F 377 ALA TYR GLU LEU GLU GLY ALA VAL LYS ARG ALA ASP LEU SEQRES 19 F 377 VAL ILE GLY ALA VAL LEU VAL PRO GLY ALA LYS ALA PRO SEQRES 20 F 377 LYS LEU VAL SER ASN SER LEU VAL ALA HIS MET LYS PRO SEQRES 21 F 377 GLY ALA VAL LEU VAL ASP ILE ALA ILE ASP GLN GLY GLY SEQRES 22 F 377 CYS PHE GLU GLY SER ARG PRO THR THR TYR ASP HIS PRO SEQRES 23 F 377 THR PHE ALA VAL HIS ASP THR LEU PHE TYR CYS VAL ALA SEQRES 24 F 377 ASN MET PRO ALA SER VAL PRO LYS THR SER THR TYR ALA SEQRES 25 F 377 LEU THR ASN ALA THR MET PRO TYR VAL LEU GLU LEU ALA SEQRES 26 F 377 ASP HIS GLY TRP ARG ALA ALA CYS ARG SER ASN PRO ALA SEQRES 27 F 377 LEU ALA LYS GLY LEU SER THR HIS GLU GLY ALA LEU LEU SEQRES 28 F 377 SER GLU ARG VAL ALA THR ASP LEU GLY VAL PRO PHE THR SEQRES 29 F 377 GLU PRO ALA SER VAL LEU ALA HIS HIS HIS HIS HIS HIS HET MG A1372 1 HET PYR A1373 6 HET MG B1372 1 HET PYR B1373 6 HET PYR C1371 6 HET PYR D1371 6 HET PYR E1374 6 HET NAD E1375 44 HET MG F1374 1 HET PYR F1375 6 HET NAD F1376 44 HETNAM MG MAGNESIUM ION HETNAM PYR PYRUVIC ACID HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 7 MG 3(MG 2+) FORMUL 8 PYR 6(C3 H4 O3) FORMUL 14 NAD 2(C21 H27 N7 O14 P2) FORMUL 18 HOH *1276(H2 O) HELIX 1 1 THR A 19 ARG A 29 1 11 HELIX 2 2 GLY A 40 ALA A 44 5 5 HELIX 3 3 THR A 46 GLY A 54 1 9 HELIX 4 4 THR A 60 ALA A 68 1 9 HELIX 5 5 ILE A 78 LEU A 85 5 8 HELIX 6 6 HIS A 96 ALA A 99 5 4 HELIX 7 7 SER A 100 GLY A 111 1 12 HELIX 8 8 GLU A 118 VAL A 120 5 3 HELIX 9 9 LEU A 130 LEU A 149 1 20 HELIX 10 10 MET A 150 GLY A 154 5 5 HELIX 11 11 GLY A 177 MET A 190 1 14 HELIX 12 12 ASN A 200 PHE A 211 1 12 HELIX 13 13 SER A 221 ALA A 232 1 12 HELIX 14 14 SER A 251 HIS A 257 1 7 HELIX 15 15 ALA A 268 GLY A 272 5 5 HELIX 16 16 ASN A 300 SER A 304 5 5 HELIX 17 17 VAL A 305 LYS A 341 1 37 HELIX 18 18 SER A 352 GLY A 360 1 9 HELIX 19 19 GLU A 365 LEU A 370 1 6 HELIX 20 20 THR B 19 ARG B 29 1 11 HELIX 21 21 GLY B 40 ALA B 44 5 5 HELIX 22 22 THR B 46 GLY B 54 1 9 HELIX 23 23 THR B 60 ALA B 68 1 9 HELIX 24 24 ILE B 78 LEU B 85 5 8 HELIX 25 25 HIS B 96 ALA B 99 5 4 HELIX 26 26 SER B 100 GLY B 111 1 12 HELIX 27 27 GLU B 118 VAL B 120 5 3 HELIX 28 28 LEU B 130 LEU B 149 1 20 HELIX 29 29 MET B 150 GLY B 154 5 5 HELIX 30 30 GLY B 177 MET B 190 1 14 HELIX 31 31 ASN B 200 PHE B 211 1 12 HELIX 32 32 SER B 221 ALA B 232 1 12 HELIX 33 33 SER B 251 HIS B 257 1 7 HELIX 34 34 ALA B 268 GLY B 272 5 5 HELIX 35 35 ASN B 300 SER B 304 5 5 HELIX 36 36 VAL B 305 GLY B 342 1 38 HELIX 37 37 SER B 352 GLY B 360 1 9 HELIX 38 38 GLU B 365 LEU B 370 1 6 HELIX 39 39 THR C 19 ARG C 29 1 11 HELIX 40 40 GLY C 40 ALA C 44 5 5 HELIX 41 41 THR C 46 GLY C 54 1 9 HELIX 42 42 THR C 60 ALA C 68 1 9 HELIX 43 43 ILE C 78 LEU C 85 5 8 HELIX 44 44 HIS C 96 ALA C 99 5 4 HELIX 45 45 SER C 100 GLY C 111 1 12 HELIX 46 46 GLU C 118 VAL C 120 5 3 HELIX 47 47 LEU C 130 LEU C 149 1 20 HELIX 48 48 MET C 150 GLY C 154 5 5 HELIX 49 49 GLY C 177 MET C 190 1 14 HELIX 50 50 ASN C 200 PHE C 211 1 12 HELIX 51 51 SER C 221 ALA C 232 1 12 HELIX 52 52 SER C 251 ALA C 256 1 6 HELIX 53 53 ALA C 268 GLY C 272 5 5 HELIX 54 54 ASN C 300 SER C 304 5 5 HELIX 55 55 VAL C 305 LYS C 341 1 37 HELIX 56 56 SER C 352 LEU C 359 1 8 HELIX 57 57 GLU C 365 LEU C 370 1 6 HELIX 58 58 THR D 19 ARG D 29 1 11 HELIX 59 59 GLY D 40 ALA D 44 5 5 HELIX 60 60 THR D 46 ALA D 53 1 8 HELIX 61 61 THR D 60 ALA D 68 1 9 HELIX 62 62 ILE D 78 LEU D 85 5 8 HELIX 63 63 HIS D 96 ALA D 99 5 4 HELIX 64 64 SER D 100 GLY D 111 1 12 HELIX 65 65 GLU D 118 VAL D 120 5 3 HELIX 66 66 LEU D 130 LEU D 149 1 20 HELIX 67 67 MET D 150 GLY D 154 5 5 HELIX 68 68 GLY D 177 MET D 190 1 14 HELIX 69 69 ASN D 200 PHE D 211 1 12 HELIX 70 70 SER D 221 ALA D 232 1 12 HELIX 71 71 SER D 251 ALA D 256 1 6 HELIX 72 72 ALA D 268 GLY D 272 5 5 HELIX 73 73 ASN D 300 SER D 304 5 5 HELIX 74 74 VAL D 305 LYS D 341 1 37 HELIX 75 75 SER D 352 GLY D 360 1 9 HELIX 76 76 GLU D 365 LEU D 370 1 6 HELIX 77 77 THR E 19 ARG E 29 1 11 HELIX 78 78 GLY E 40 ALA E 44 5 5 HELIX 79 79 THR E 46 GLY E 54 1 9 HELIX 80 80 THR E 60 ALA E 68 1 9 HELIX 81 81 ILE E 78 LEU E 85 5 8 HELIX 82 82 HIS E 96 ALA E 99 5 4 HELIX 83 83 SER E 100 GLY E 111 1 12 HELIX 84 84 GLU E 118 VAL E 120 5 3 HELIX 85 85 LEU E 129 LEU E 149 1 21 HELIX 86 86 MET E 150 GLY E 154 5 5 HELIX 87 87 GLY E 177 MET E 190 1 14 HELIX 88 88 ASN E 200 PHE E 211 1 12 HELIX 89 89 SER E 221 ALA E 232 1 12 HELIX 90 90 SER E 251 ALA E 256 1 6 HELIX 91 91 ALA E 268 GLY E 272 5 5 HELIX 92 92 ASN E 300 SER E 304 5 5 HELIX 93 93 VAL E 305 LYS E 341 1 37 HELIX 94 94 SER E 352 GLY E 360 1 9 HELIX 95 95 GLU E 365 ALA E 371 1 7 HELIX 96 96 THR F 19 GLY F 30 1 12 HELIX 97 97 GLY F 40 ALA F 44 5 5 HELIX 98 98 THR F 46 GLY F 54 1 9 HELIX 99 99 THR F 60 ALA F 68 1 9 HELIX 100 100 ILE F 78 LEU F 85 5 8 HELIX 101 101 HIS F 96 ALA F 99 5 4 HELIX 102 102 SER F 100 GLY F 111 1 12 HELIX 103 103 GLU F 118 VAL F 120 5 3 HELIX 104 104 LEU F 129 LEU F 149 1 21 HELIX 105 105 MET F 150 GLY F 154 5 5 HELIX 106 106 GLY F 177 MET F 190 1 14 HELIX 107 107 ASN F 200 PHE F 211 1 12 HELIX 108 108 SER F 221 ALA F 232 1 12 HELIX 109 109 SER F 251 HIS F 257 1 7 HELIX 110 110 ALA F 268 GLY F 272 5 5 HELIX 111 111 ASN F 300 SER F 304 5 5 HELIX 112 112 VAL F 305 GLY F 342 1 38 HELIX 113 113 SER F 352 GLY F 360 1 9 HELIX 114 114 GLU F 365 ALA F 371 1 7 SHEET 1 AA 8 GLN A 56 VAL A 58 0 SHEET 2 AA 8 GLU A 32 GLN A 36 1 O VAL A 33 N GLN A 56 SHEET 3 AA 8 ARG A 2 ILE A 5 1 O VAL A 3 N LEU A 34 SHEET 4 AA 8 LEU A 70 LEU A 72 1 O LEU A 70 N GLY A 4 SHEET 5 AA 8 ILE A 90 THR A 93 1 O ILE A 90 N LEU A 71 SHEET 6 AA 8 THR A 113 ALA A 116 1 O THR A 113 N LEU A 91 SHEET 7 AA 8 LEU A 343 HIS A 346 -1 N SER A 344 O SER A 114 SHEET 8 AA 8 ALA A 349 LEU A 350 -1 O ALA A 349 N HIS A 346 SHEET 1 AB 7 HIS A 216 TYR A 219 0 SHEET 2 AB 7 THR A 193 ASP A 198 1 O VAL A 194 N HIS A 216 SHEET 3 AB 7 ASP A 170 ILE A 174 1 O VAL A 171 N THR A 195 SHEET 4 AB 7 LEU A 234 GLY A 237 1 O LEU A 234 N VAL A 172 SHEET 5 AB 7 VAL A 263 ASP A 266 1 O VAL A 263 N VAL A 235 SHEET 6 AB 7 THR A 293 TYR A 296 1 O LEU A 294 N LEU A 264 SHEET 7 AB 7 THR A 287 VAL A 290 -1 O PHE A 288 N PHE A 295 SHEET 1 BA 8 GLN B 56 VAL B 58 0 SHEET 2 BA 8 GLU B 32 GLN B 36 1 O VAL B 33 N GLN B 56 SHEET 3 BA 8 ARG B 2 ILE B 5 1 O VAL B 3 N LEU B 34 SHEET 4 BA 8 LEU B 70 LEU B 72 1 O LEU B 70 N GLY B 4 SHEET 5 BA 8 ILE B 90 THR B 93 1 O ILE B 90 N LEU B 71 SHEET 6 BA 8 THR B 113 ALA B 116 1 O THR B 113 N LEU B 91 SHEET 7 BA 8 LEU B 343 HIS B 346 -1 N SER B 344 O SER B 114 SHEET 8 BA 8 ALA B 349 LEU B 350 -1 O ALA B 349 N HIS B 346 SHEET 1 BB 7 HIS B 216 TYR B 219 0 SHEET 2 BB 7 THR B 193 ASP B 198 1 O VAL B 194 N HIS B 216 SHEET 3 BB 7 ASP B 170 ILE B 174 1 O VAL B 171 N THR B 195 SHEET 4 BB 7 LEU B 234 GLY B 237 1 O LEU B 234 N VAL B 172 SHEET 5 BB 7 VAL B 263 ASP B 266 1 O VAL B 263 N VAL B 235 SHEET 6 BB 7 THR B 293 TYR B 296 1 O LEU B 294 N LEU B 264 SHEET 7 BB 7 THR B 287 VAL B 290 -1 O PHE B 288 N PHE B 295 SHEET 1 CA 8 GLN C 56 VAL C 58 0 SHEET 2 CA 8 GLU C 32 GLN C 36 1 O VAL C 33 N GLN C 56 SHEET 3 CA 8 ARG C 2 ILE C 5 1 O VAL C 3 N LEU C 34 SHEET 4 CA 8 LEU C 70 LEU C 72 1 O LEU C 70 N GLY C 4 SHEET 5 CA 8 ILE C 90 THR C 93 1 O ILE C 90 N LEU C 71 SHEET 6 CA 8 THR C 113 ALA C 116 1 O THR C 113 N LEU C 91 SHEET 7 CA 8 LEU C 343 HIS C 346 -1 N SER C 344 O SER C 114 SHEET 8 CA 8 ALA C 349 LEU C 350 -1 O ALA C 349 N HIS C 346 SHEET 1 CB 7 HIS C 216 TYR C 219 0 SHEET 2 CB 7 THR C 193 ASP C 198 1 O VAL C 194 N HIS C 216 SHEET 3 CB 7 ASP C 170 ILE C 174 1 O VAL C 171 N THR C 195 SHEET 4 CB 7 LEU C 234 GLY C 237 1 O LEU C 234 N VAL C 172 SHEET 5 CB 7 VAL C 263 ASP C 266 1 O VAL C 263 N VAL C 235 SHEET 6 CB 7 THR C 293 TYR C 296 1 O LEU C 294 N LEU C 264 SHEET 7 CB 7 THR C 287 VAL C 290 -1 O PHE C 288 N PHE C 295 SHEET 1 DA 8 GLN D 56 VAL D 58 0 SHEET 2 DA 8 GLU D 32 GLN D 36 1 O VAL D 33 N GLN D 56 SHEET 3 DA 8 ARG D 2 ILE D 5 1 O VAL D 3 N LEU D 34 SHEET 4 DA 8 LEU D 70 LEU D 72 1 O LEU D 70 N GLY D 4 SHEET 5 DA 8 ILE D 90 THR D 93 1 O ILE D 90 N LEU D 71 SHEET 6 DA 8 THR D 113 ALA D 116 1 O THR D 113 N LEU D 91 SHEET 7 DA 8 LEU D 343 HIS D 346 -1 N SER D 344 O SER D 114 SHEET 8 DA 8 ALA D 349 LEU D 350 -1 O ALA D 349 N HIS D 346 SHEET 1 DB 7 HIS D 216 TYR D 219 0 SHEET 2 DB 7 THR D 193 ASP D 198 1 O VAL D 194 N HIS D 216 SHEET 3 DB 7 ASP D 170 ILE D 174 1 O VAL D 171 N THR D 195 SHEET 4 DB 7 LEU D 234 GLY D 237 1 O LEU D 234 N VAL D 172 SHEET 5 DB 7 VAL D 263 ASP D 266 1 O VAL D 263 N VAL D 235 SHEET 6 DB 7 THR D 293 TYR D 296 1 O LEU D 294 N LEU D 264 SHEET 7 DB 7 THR D 287 VAL D 290 -1 O PHE D 288 N PHE D 295 SHEET 1 EA 8 GLN E 56 VAL E 58 0 SHEET 2 EA 8 GLU E 32 GLN E 36 1 O VAL E 33 N GLN E 56 SHEET 3 EA 8 ARG E 2 ILE E 5 1 O VAL E 3 N LEU E 34 SHEET 4 EA 8 LEU E 70 LEU E 72 1 O LEU E 70 N GLY E 4 SHEET 5 EA 8 ILE E 90 THR E 93 1 O ILE E 90 N LEU E 71 SHEET 6 EA 8 THR E 113 ALA E 116 1 O THR E 113 N LEU E 91 SHEET 7 EA 8 LEU E 343 HIS E 346 -1 N SER E 344 O SER E 114 SHEET 8 EA 8 ALA E 349 LEU E 350 -1 O ALA E 349 N HIS E 346 SHEET 1 EB 7 HIS E 216 TYR E 219 0 SHEET 2 EB 7 THR E 193 ASP E 198 1 O VAL E 194 N HIS E 216 SHEET 3 EB 7 ASP E 170 ILE E 174 1 O VAL E 171 N THR E 195 SHEET 4 EB 7 LEU E 234 GLY E 237 1 O LEU E 234 N VAL E 172 SHEET 5 EB 7 VAL E 263 ASP E 266 1 O VAL E 263 N VAL E 235 SHEET 6 EB 7 THR E 293 TYR E 296 1 O LEU E 294 N LEU E 264 SHEET 7 EB 7 THR E 287 VAL E 290 -1 O PHE E 288 N PHE E 295 SHEET 1 FA 8 GLN F 56 VAL F 58 0 SHEET 2 FA 8 GLU F 32 GLN F 36 1 O VAL F 33 N GLN F 56 SHEET 3 FA 8 ARG F 2 ILE F 5 1 O VAL F 3 N LEU F 34 SHEET 4 FA 8 LEU F 70 LEU F 72 1 O LEU F 70 N GLY F 4 SHEET 5 FA 8 ILE F 90 THR F 93 1 O ILE F 90 N LEU F 71 SHEET 6 FA 8 THR F 113 ALA F 116 1 O THR F 113 N LEU F 91 SHEET 7 FA 8 LEU F 343 HIS F 346 -1 N SER F 344 O SER F 114 SHEET 8 FA 8 ALA F 349 LEU F 350 -1 O ALA F 349 N HIS F 346 SHEET 1 FB 7 HIS F 216 TYR F 219 0 SHEET 2 FB 7 THR F 193 ASP F 198 1 O VAL F 194 N HIS F 216 SHEET 3 FB 7 ASP F 170 ILE F 174 1 O VAL F 171 N THR F 195 SHEET 4 FB 7 LEU F 234 GLY F 237 1 O LEU F 234 N VAL F 172 SHEET 5 FB 7 VAL F 263 ASP F 266 1 O VAL F 263 N VAL F 235 SHEET 6 FB 7 THR F 293 TYR F 296 1 O LEU F 294 N LEU F 264 SHEET 7 FB 7 THR F 287 VAL F 290 -1 O PHE F 288 N PHE F 295 LINK NE2 HIS A 327 MG MG A1372 1555 1555 2.20 LINK NE2 HIS B 327 MG MG B1372 1555 1555 2.30 LINK NE2 HIS F 327 MG MG F1374 1555 1555 2.36 SITE 1 AC1 2 GLU A 323 HIS A 327 SITE 1 AC2 1 HIS B 327 SITE 1 AC3 2 GLU F 323 HIS F 327 SITE 1 AC4 10 ARG F 15 LYS F 75 HIS F 96 LEU F 130 SITE 2 AC4 10 MET F 133 ASP F 270 ALA F 299 ASN F 300 SITE 3 AC4 10 PRO F 302 NAD F1376 SITE 1 AC5 9 ARG E 15 LYS E 75 HIS E 96 MET E 133 SITE 2 AC5 9 ASP E 270 ALA E 299 ASN E 300 PRO E 302 SITE 3 AC5 9 NAD E1375 SITE 1 AC6 7 ARG B 15 LYS B 75 PHE B 94 HIS B 96 SITE 2 AC6 7 LEU B 130 MET B 133 ASN B 300 SITE 1 AC7 6 ARG D 15 LYS D 75 HIS D 96 LEU D 130 SITE 2 AC7 6 MET D 133 ASN D 300 SITE 1 AC8 7 ARG A 15 LYS A 75 PHE A 94 HIS A 96 SITE 2 AC8 7 MET A 133 ASP A 270 ASN A 300 SITE 1 AC9 6 ARG C 15 LYS C 75 HIS C 96 LEU C 130 SITE 2 AC9 6 MET C 133 ASN C 300 SITE 1 BC1 32 LEU E 130 MET E 133 SER E 134 ALA E 137 SITE 2 BC1 32 GLY E 177 THR E 178 ALA E 179 ASP E 198 SITE 3 BC1 32 LYS E 203 SER E 220 ALA E 238 VAL E 239 SITE 4 BC1 32 LEU E 240 LEU E 249 ILE E 267 ASP E 270 SITE 5 BC1 32 GLN E 271 VAL E 298 ALA E 299 ASN E 300 SITE 6 BC1 32 MET E 301 PRO E 302 PYR E1374 HOH E2098 SITE 7 BC1 32 HOH E2116 HOH E2125 HOH E2190 HOH E2191 SITE 8 BC1 32 HOH E2192 HOH E2193 HOH E2194 HOH E2195 SITE 1 BC2 30 MET F 133 SER F 134 ALA F 137 GLY F 177 SITE 2 BC2 30 THR F 178 ALA F 179 ASP F 198 LYS F 203 SITE 3 BC2 30 SER F 220 ALA F 238 VAL F 239 LEU F 240 SITE 4 BC2 30 ILE F 267 ASP F 270 GLN F 271 VAL F 298 SITE 5 BC2 30 ALA F 299 ASN F 300 MET F 301 PRO F 302 SITE 6 BC2 30 PYR F1375 HOH F2131 HOH F2145 HOH F2158 SITE 7 BC2 30 HOH F2246 HOH F2247 HOH F2248 HOH F2250 SITE 8 BC2 30 HOH F2251 HOH F2252 CRYST1 176.247 171.767 98.254 90.00 90.00 90.00 P 21 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005822 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010178 0.00000 MTRIX1 1 -0.050620 -0.997850 -0.041660 -4.49911 1 MTRIX2 1 -0.998040 0.049010 0.038870 -2.32420 1 MTRIX3 1 -0.036740 0.043550 -0.998380 -52.11258 1 MTRIX1 2 -0.043360 -0.998670 -0.027950 -3.99975 1 MTRIX2 2 -0.998560 0.042440 0.032790 -2.16349 1 MTRIX3 2 -0.031560 0.029340 -0.999070 -51.51058 1 MTRIX1 3 -0.059460 -0.997650 -0.034150 -4.87474 1 MTRIX2 3 -0.997990 0.058650 0.024030 -3.00270 1 MTRIX3 3 -0.021970 0.035510 -0.999130 -51.29456 1