data_2VM6 # _entry.id 2VM6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VM6 PDBE EBI-35095 WWPDB D_1290035095 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VM5 unspecified 'HUMAN BIR2 DOMAIN OF BACULOVIRAL INHIBITOR OF APOPTOSIS REPEAT-CONTAINING 1 (BIRC1' PDB 2V6Q unspecified 'CRYSTAL STRUCTURE OF A BHRF-1 : BIM BH3 COMPLEX' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VM6 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-01-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Herman, M.D.' 1 'Lehtio, L.' 2 'Arrowsmith, C.H.' 3 'Berglund, H.' 4 'Busam, R.D.' 5 'Collins, R.' 6 'Dahlgren, L.G.' 7 'Edwards, A.M.' 8 'Flodin, S.' 9 'Flores, A.' 10 'Graslund, S.' 11 'Hammarstrom, M.' 12 'Johansson, I.' 13 'Kallas, A.' 14 'Karlberg, T.' 15 'Kotenyova, T.' 16 'Moche, M.' 17 'Nilsson, M.E.' 18 'Nyman, T.' 19 'Persson, C.' 20 'Sagemark, J.' 21 'Svensson, L.' 22 'Thorsell, A.G.' 23 'Tresaugues, L.' 24 'van den Berg, S.' 25 'Weigelt, J.' 26 'Welin, M.' 27 'Nordlund, P.' 28 'Structural Genomics Consortium (SGC)' 29 # _citation.id primary _citation.title 'Completing the Family Portrait of the Anti- Apoptotic Bcl-2 Proteins: Crystal Structure of Human Bfl-1 in Complex with Bim.' _citation.journal_abbrev 'FEBS Lett.' _citation.journal_volume 582 _citation.page_first 3590 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM FEBLAL _citation.country NE _citation.journal_id_ISSN 0014-5793 _citation.journal_id_CSD 0165 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18812174 _citation.pdbx_database_id_DOI 10.1016/J.FEBSLET.2008.09.028 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Herman, M.D.' 1 ? primary 'Nyman, T.' 2 ? primary 'Welin, M.' 3 ? primary 'Lehtio, L.' 4 ? primary 'Flodin, S.' 5 ? primary 'Tresaugues, L.' 6 ? primary 'Kotenyova, T.' 7 ? primary 'Flores, A.' 8 ? primary 'Nordlund, P.' 9 ? # _cell.entry_id 2VM6 _cell.length_a 70.800 _cell.length_b 70.800 _cell.length_c 208.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VM6 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BCL-2-RELATED PROTEIN A1' 17246.617 1 ? ? 'RESIDUES 1-149' ? 2 polymer man 'BCL-2-LIKE PROTEIN 11' 3117.497 1 ? ? 'RESIDUES 141-165' ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 38 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'PROTEIN BFL-1, HEMOPOIETIC-SPECIFIC EARLY RESPONSE PROTEIN, PROTEIN GRS, BCL-2A1, A1' 2 'BCL2-INTERACTING MEDIATOR OF CELL DEATH' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMTDCEFGYIYRLAQDYLQCVLQIPQPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEF EDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWENGFVKKFE ; ;SMTDCEFGYIYRLAQDYLQCVLQIPQPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEF EDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWENGFVKKFE ; A ? 2 'polypeptide(L)' no no DMRPEIWIAQELRRIGDEFNAYYAR DMRPEIWIAQELRRIGDEFNAYYAR B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 THR n 1 4 ASP n 1 5 CYS n 1 6 GLU n 1 7 PHE n 1 8 GLY n 1 9 TYR n 1 10 ILE n 1 11 TYR n 1 12 ARG n 1 13 LEU n 1 14 ALA n 1 15 GLN n 1 16 ASP n 1 17 TYR n 1 18 LEU n 1 19 GLN n 1 20 CYS n 1 21 VAL n 1 22 LEU n 1 23 GLN n 1 24 ILE n 1 25 PRO n 1 26 GLN n 1 27 PRO n 1 28 GLY n 1 29 SER n 1 30 GLY n 1 31 PRO n 1 32 SER n 1 33 LYS n 1 34 THR n 1 35 SER n 1 36 ARG n 1 37 VAL n 1 38 LEU n 1 39 GLN n 1 40 ASN n 1 41 VAL n 1 42 ALA n 1 43 PHE n 1 44 SER n 1 45 VAL n 1 46 GLN n 1 47 LYS n 1 48 GLU n 1 49 VAL n 1 50 GLU n 1 51 LYS n 1 52 ASN n 1 53 LEU n 1 54 LYS n 1 55 SER n 1 56 CYS n 1 57 LEU n 1 58 ASP n 1 59 ASN n 1 60 VAL n 1 61 ASN n 1 62 VAL n 1 63 VAL n 1 64 SER n 1 65 VAL n 1 66 ASP n 1 67 THR n 1 68 ALA n 1 69 ARG n 1 70 THR n 1 71 LEU n 1 72 PHE n 1 73 ASN n 1 74 GLN n 1 75 VAL n 1 76 MET n 1 77 GLU n 1 78 LYS n 1 79 GLU n 1 80 PHE n 1 81 GLU n 1 82 ASP n 1 83 GLY n 1 84 ILE n 1 85 ILE n 1 86 ASN n 1 87 TRP n 1 88 GLY n 1 89 ARG n 1 90 ILE n 1 91 VAL n 1 92 THR n 1 93 ILE n 1 94 PHE n 1 95 ALA n 1 96 PHE n 1 97 GLU n 1 98 GLY n 1 99 ILE n 1 100 LEU n 1 101 ILE n 1 102 LYS n 1 103 LYS n 1 104 LEU n 1 105 LEU n 1 106 ARG n 1 107 GLN n 1 108 GLN n 1 109 ILE n 1 110 ALA n 1 111 PRO n 1 112 ASP n 1 113 VAL n 1 114 ASP n 1 115 THR n 1 116 TYR n 1 117 LYS n 1 118 GLU n 1 119 ILE n 1 120 SER n 1 121 TYR n 1 122 PHE n 1 123 VAL n 1 124 ALA n 1 125 GLU n 1 126 PHE n 1 127 ILE n 1 128 MET n 1 129 ASN n 1 130 ASN n 1 131 THR n 1 132 GLY n 1 133 GLU n 1 134 TRP n 1 135 ILE n 1 136 ARG n 1 137 GLN n 1 138 ASN n 1 139 GLY n 1 140 GLY n 1 141 TRP n 1 142 GLU n 1 143 ASN n 1 144 GLY n 1 145 PHE n 1 146 VAL n 1 147 LYS n 1 148 LYS n 1 149 PHE n 1 150 GLU n 2 1 ASP n 2 2 MET n 2 3 ARG n 2 4 PRO n 2 5 GLU n 2 6 ILE n 2 7 TRP n 2 8 ILE n 2 9 ALA n 2 10 GLN n 2 11 GLU n 2 12 LEU n 2 13 ARG n 2 14 ARG n 2 15 ILE n 2 16 GLY n 2 17 ASP n 2 18 GLU n 2 19 PHE n 2 20 ASN n 2 21 ALA n 2 22 TYR n 2 23 TYR n 2 24 ALA n 2 25 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3) R3 PRARE' ? ? ? ? ? ? ? ? ? ? ? PNIC-BSA4 ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3) R3 PRARE' ? ? ? ? ? ? ? ? ? ? ? PNIC-BSA4 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2VM6 1 ? ? 2VM6 ? 2 UNP B2LA1_HUMAN 1 ? ? Q16548 ? 3 UNP BIM_HUMAN 2 ? ? O43521 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VM6 A 1 ? 1 ? 2VM6 0 ? 0 ? 0 0 2 2 2VM6 A 2 ? 150 ? Q16548 1 ? 149 ? 1 149 3 3 2VM6 B 1 ? 25 ? O43521 141 ? 165 ? 141 165 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VM6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.4 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M BIS, TRIS PH 5.8, 2M AMSO4' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2007-09-27 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DIAMOND (111), GE(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.934000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VM6 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 10576 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.27 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.7 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.75 _reflns_shell.pdbx_redundancy 8.9 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VM6 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 10075 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.250 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 503 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.902 _refine.B_iso_mean 37.38 _refine.aniso_B[1][1] -0.24000 _refine.aniso_B[2][2] -0.24000 _refine.aniso_B[3][3] 0.36000 _refine.aniso_B[1][2] -0.12000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 25-30 ARE DISORDERED, FIRST SER IS FROM VECTOR.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.250 _refine.pdbx_overall_ESU_R_Free 0.211 _refine.overall_SU_ML 0.137 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.977 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1393 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 1436 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 1423 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.401 1.939 ? 1920 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.748 5.000 ? 166 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.804 24.545 ? 77 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.772 15.000 ? 254 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.945 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.096 0.200 ? 207 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1083 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 715 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 1012 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 52 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.178 0.200 ? 44 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.144 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.852 1.500 ? 872 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.387 2.000 ? 1353 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.157 3.000 ? 652 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.307 4.500 ? 567 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.26 _refine_ls_shell.number_reflns_R_work 708 _refine_ls_shell.R_factor_R_work 0.1930 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2470 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 2VM6 _struct.title 'Human Bcl2-A1 in complex with Bim-BH3 peptide' _struct.pdbx_descriptor 'BCL-2-RELATED PROTEIN A1, BCL-2-LIKE PROTEIN 11' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VM6 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'B-CELL LYMPHOMA2, ANTIAPOPTOTIC, IMMUNE SYSTEM, BIM, BFL-1, BCL2A1, BCL-2A1, MEMBRANE, APOPTOSIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? LEU A 22 ? SER A 0 LEU A 21 1 ? 22 HELX_P HELX_P2 2 SER A 32 ? LEU A 53 ? SER A 31 LEU A 52 1 ? 22 HELX_P HELX_P3 3 LEU A 53 ? ASP A 58 ? LEU A 52 ASP A 57 1 ? 6 HELX_P HELX_P4 4 SER A 64 ? GLU A 81 ? SER A 63 GLU A 80 1 ? 18 HELX_P HELX_P5 5 ASN A 86 ? GLN A 108 ? ASN A 85 GLN A 107 1 ? 23 HELX_P HELX_P6 6 VAL A 113 ? THR A 115 ? VAL A 112 THR A 114 5 ? 3 HELX_P HELX_P7 7 TYR A 116 ? ASN A 138 ? TYR A 115 ASN A 137 1 ? 23 HELX_P HELX_P8 8 GLY A 139 ? GLY A 144 ? GLY A 138 GLY A 143 1 ? 6 HELX_P HELX_P9 9 GLY A 144 ? GLU A 150 ? GLY A 143 GLU A 149 1 ? 7 HELX_P HELX_P10 10 ARG B 3 ? TYR B 23 ? ARG B 143 TYR B 163 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A1150' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 LYS A 148 ? LYS A 147 . ? 1_555 ? 2 AC1 3 ALA B 24 ? ALA B 164 . ? 1_555 ? 3 AC1 3 ARG B 25 ? ARG B 165 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VM6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VM6 _atom_sites.fract_transf_matrix[1][1] 0.014124 _atom_sites.fract_transf_matrix[1][2] 0.008155 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016309 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004789 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 CYS 5 4 4 CYS CYS A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 PHE 7 6 6 PHE PHE A . n A 1 8 GLY 8 7 7 GLY GLY A . n A 1 9 TYR 9 8 8 TYR TYR A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 TYR 11 10 10 TYR TYR A . n A 1 12 ARG 12 11 11 ARG ARG A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 TYR 17 16 16 TYR TYR A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 CYS 20 19 19 CYS CYS A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 ILE 24 23 23 ILE ILE A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 GLN 26 25 ? ? ? A . n A 1 27 PRO 27 26 ? ? ? A . n A 1 28 GLY 28 27 ? ? ? A . n A 1 29 SER 29 28 ? ? ? A . n A 1 30 GLY 30 29 ? ? ? A . n A 1 31 PRO 31 30 ? ? ? A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 ARG 36 35 35 ARG ARG A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 GLN 39 38 38 GLN GLN A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 PHE 43 42 42 PHE PHE A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 GLN 46 45 45 GLN GLN A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 ASN 52 51 51 ASN ASN A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 CYS 56 55 55 CYS CYS A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 ASN 59 58 58 ASN ASN A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 ASP 66 65 65 ASP ASP A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 ASN 73 72 72 ASN ASN A . n A 1 74 GLN 74 73 73 GLN GLN A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 MET 76 75 75 MET MET A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 LYS 78 77 77 LYS LYS A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 PHE 80 79 79 PHE PHE A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 ASP 82 81 81 ASP ASP A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 TRP 87 86 86 TRP TRP A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ARG 89 88 88 ARG ARG A . n A 1 90 ILE 90 89 89 ILE ILE A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 THR 92 91 91 THR THR A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 PHE 94 93 93 PHE PHE A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 LEU 100 99 99 LEU LEU A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 LYS 103 102 102 LYS LYS A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 ARG 106 105 105 ARG ARG A . n A 1 107 GLN 107 106 106 GLN GLN A . n A 1 108 GLN 108 107 107 GLN GLN A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 ASP 112 111 111 ASP ASP A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 TYR 116 115 115 TYR TYR A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 ILE 119 118 118 ILE ILE A . n A 1 120 SER 120 119 119 SER SER A . n A 1 121 TYR 121 120 120 TYR TYR A . n A 1 122 PHE 122 121 121 PHE PHE A . n A 1 123 VAL 123 122 122 VAL VAL A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 GLU 125 124 124 GLU GLU A . n A 1 126 PHE 126 125 125 PHE PHE A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 MET 128 127 127 MET MET A . n A 1 129 ASN 129 128 128 ASN ASN A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 THR 131 130 130 THR THR A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 TRP 134 133 133 TRP TRP A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 GLN 137 136 136 GLN GLN A . n A 1 138 ASN 138 137 137 ASN ASN A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 TRP 141 140 140 TRP TRP A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 ASN 143 142 142 ASN ASN A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 PHE 145 144 144 PHE PHE A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 LYS 147 146 146 LYS LYS A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 GLU 150 149 149 GLU GLU A . n B 2 1 ASP 1 141 141 ASP ASP B . n B 2 2 MET 2 142 142 MET MET B . n B 2 3 ARG 3 143 143 ARG ARG B . n B 2 4 PRO 4 144 144 PRO PRO B . n B 2 5 GLU 5 145 145 GLU GLU B . n B 2 6 ILE 6 146 146 ILE ILE B . n B 2 7 TRP 7 147 147 TRP TRP B . n B 2 8 ILE 8 148 148 ILE ILE B . n B 2 9 ALA 9 149 149 ALA ALA B . n B 2 10 GLN 10 150 150 GLN GLN B . n B 2 11 GLU 11 151 151 GLU GLU B . n B 2 12 LEU 12 152 152 LEU LEU B . n B 2 13 ARG 13 153 153 ARG ARG B . n B 2 14 ARG 14 154 154 ARG ARG B . n B 2 15 ILE 15 155 155 ILE ILE B . n B 2 16 GLY 16 156 156 GLY GLY B . n B 2 17 ASP 17 157 157 ASP ASP B . n B 2 18 GLU 18 158 158 GLU GLU B . n B 2 19 PHE 19 159 159 PHE PHE B . n B 2 20 ASN 20 160 160 ASN ASN B . n B 2 21 ALA 21 161 161 ALA ALA B . n B 2 22 TYR 22 162 162 TYR TYR B . n B 2 23 TYR 23 163 163 TYR TYR B . n B 2 24 ALA 24 164 164 ALA ALA B . n B 2 25 ARG 25 165 165 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 1150 1150 SO4 SO4 A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH B . E 4 HOH 2 2002 2002 HOH HOH B . E 4 HOH 3 2003 2003 HOH HOH B . E 4 HOH 4 2004 2004 HOH HOH B . E 4 HOH 5 2005 2005 HOH HOH B . E 4 HOH 6 2006 2006 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2770 ? 1 MORE -22.6 ? 1 'SSA (A^2)' 10260 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2019 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-09-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Experimental preparation' 6 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' reflns # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_exptl_crystal_grow.temp' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_reflns.pdbx_Rmerge_I_obs' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -5.5900 _pdbx_refine_tls.origin_y 20.2230 _pdbx_refine_tls.origin_z 52.3430 _pdbx_refine_tls.T[1][1] -0.0312 _pdbx_refine_tls.T[2][2] -0.1180 _pdbx_refine_tls.T[3][3] -0.1535 _pdbx_refine_tls.T[1][2] 0.0533 _pdbx_refine_tls.T[1][3] 0.0299 _pdbx_refine_tls.T[2][3] 0.0149 _pdbx_refine_tls.L[1][1] 4.2234 _pdbx_refine_tls.L[2][2] 2.9115 _pdbx_refine_tls.L[3][3] 1.3450 _pdbx_refine_tls.L[1][2] 0.0842 _pdbx_refine_tls.L[1][3] 0.9229 _pdbx_refine_tls.L[2][3] -0.0071 _pdbx_refine_tls.S[1][1] 0.2037 _pdbx_refine_tls.S[1][2] 0.1462 _pdbx_refine_tls.S[1][3] -0.1986 _pdbx_refine_tls.S[2][1] -0.3558 _pdbx_refine_tls.S[2][2] -0.1641 _pdbx_refine_tls.S[2][3] 0.0423 _pdbx_refine_tls.S[3][1] -0.0705 _pdbx_refine_tls.S[3][2] -0.0767 _pdbx_refine_tls.S[3][3] -0.0396 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 149 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 141 ? ? B 165 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.3.0040 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? SOLVE phasing . ? 4 ? ? ? ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 114 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -62.07 _pdbx_validate_torsion.psi 5.89 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 1 ? CG ? A MET 2 CG 2 1 Y 1 A MET 1 ? SD ? A MET 2 SD 3 1 Y 1 A MET 1 ? CE ? A MET 2 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 25 ? A GLN 26 2 1 Y 1 A PRO 26 ? A PRO 27 3 1 Y 1 A GLY 27 ? A GLY 28 4 1 Y 1 A SER 28 ? A SER 29 5 1 Y 1 A GLY 29 ? A GLY 30 6 1 Y 1 A PRO 30 ? A PRO 31 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH #