HEADER APOPTOSIS 17-FEB-08 2VOF TITLE STRUCTURE OF MOUSE A1 BOUND TO THE PUMA BH3-DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2-RELATED PROTEIN A1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RESIDUES 1-152; COMPND 5 SYNONYM: PROTEIN BFL-1, HEMOPOIETIC-SPECIFIC EARLY RESPONSE PROTEIN, COMPND 6 A1-A; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: BCL-2-BINDING COMPONENT 3; COMPND 11 CHAIN: B, D; COMPND 12 FRAGMENT: BH3-DOMAIN, RESIDUES 130-155; COMPND 13 SYNONYM: P53 UP-REGULATED MODULATOR OF APOPTOSIS; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES; COMPND 16 OTHER_DETAILS: C-TERMINAL HOMOSERINE LACTONE DUE TO CNBR CLEAVAGE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PSJS 1240; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX 6P-3; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET31B PUMA TR KEYWDS BH3, BCL-2, APOPTOSIS, PRO-SURVIVAL, MITOCHONDRION, PROTEIN-PROTEIN KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.SMITS,P.E.CZABOTAR,M.G.HINDS,C.L.DAY REVDAT 5 23-OCT-24 2VOF 1 LINK REVDAT 4 13-JUL-11 2VOF 1 VERSN REVDAT 3 24-FEB-09 2VOF 1 VERSN REVDAT 2 20-MAY-08 2VOF 1 JRNL REMARK MASTER REVDAT 1 04-MAR-08 2VOF 0 JRNL AUTH C.SMITS,P.E.CZABOTAR,M.G.HINDS,C.L.DAY JRNL TITL STRUCTURAL PLASTICITY UNDERPINS PROMISCUOUS BINDING OF THE JRNL TITL 2 PROSURVIVAL PROTEIN A1. JRNL REF STRUCTURE V. 16 818 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 18462686 JRNL DOI 10.1016/J.STR.2008.02.009 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 27830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1460 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2046 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2715 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.78000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.139 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2778 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2486 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3745 ; 1.131 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5747 ; 0.809 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 335 ; 4.443 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;31.127 ;24.552 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 473 ;14.065 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.655 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 402 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3109 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 598 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 651 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2500 ; 0.164 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1410 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1530 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 124 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 71 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.161 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1745 ; 0.904 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2669 ; 1.208 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1217 ; 2.001 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1075 ; 2.843 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): -20.2530 -0.7890 -10.5560 REMARK 3 T TENSOR REMARK 3 T11: -0.1534 T22: -0.2250 REMARK 3 T33: -0.1331 T12: -0.0129 REMARK 3 T13: 0.0385 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 2.1848 L22: 2.1557 REMARK 3 L33: 3.8516 L12: -0.2101 REMARK 3 L13: 0.2458 L23: -0.2780 REMARK 3 S TENSOR REMARK 3 S11: -0.0866 S12: -0.0729 S13: 0.1136 REMARK 3 S21: 0.0543 S22: 0.0311 S23: 0.0959 REMARK 3 S31: -0.0986 S32: -0.2228 S33: 0.0555 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 131 B 153 REMARK 3 ORIGIN FOR THE GROUP (A): -25.7080 -4.5460 -22.9640 REMARK 3 T TENSOR REMARK 3 T11: -0.1624 T22: -0.2065 REMARK 3 T33: -0.2120 T12: -0.0241 REMARK 3 T13: 0.0137 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 7.9428 L22: 15.1699 REMARK 3 L33: 5.0343 L12: 8.6987 REMARK 3 L13: -1.3499 L23: -4.4499 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: 0.1112 S13: -0.0208 REMARK 3 S21: 0.0297 S22: 0.1000 S23: 0.0419 REMARK 3 S31: 0.1026 S32: -0.1209 S33: -0.0038 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -3 C 149 REMARK 3 ORIGIN FOR THE GROUP (A): -33.1150 -0.2850 -44.6730 REMARK 3 T TENSOR REMARK 3 T11: -0.1671 T22: -0.2105 REMARK 3 T33: -0.1053 T12: 0.0376 REMARK 3 T13: 0.0364 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.9599 L22: 2.0959 REMARK 3 L33: 1.9802 L12: 0.1241 REMARK 3 L13: 0.3435 L23: -0.2324 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: -0.0129 S13: -0.0417 REMARK 3 S21: -0.0725 S22: -0.0622 S23: 0.1691 REMARK 3 S31: 0.0105 S32: -0.1527 S33: 0.0594 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 132 D 153 REMARK 3 ORIGIN FOR THE GROUP (A): -23.5320 -3.7500 -34.7140 REMARK 3 T TENSOR REMARK 3 T11: -0.1664 T22: -0.2628 REMARK 3 T33: -0.1230 T12: 0.0186 REMARK 3 T13: -0.0209 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 10.3424 L22: 12.3885 REMARK 3 L33: 11.4524 L12: 5.9486 REMARK 3 L13: -6.0848 L23: -6.3809 REMARK 3 S TENSOR REMARK 3 S11: 0.1427 S12: -0.2429 S13: 0.0611 REMARK 3 S21: 0.2046 S22: -0.3348 S23: -0.6820 REMARK 3 S31: -0.1821 S32: 0.4096 S33: 0.1921 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1290035329. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97820 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29292 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 56.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, MLPHARE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID.KOH (PH 4.35), 15% REMARK 280 PEG 20,000, 0.4 M LICL, 20% GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.34150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, PRO 104 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN A, CYS 113 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN B, MET 144 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN C, PRO 104 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN C, CYS 113 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN D, MET 144 TO ILE REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 SER A 28 REMARK 465 GLN A 107 REMARK 465 ILE A 108 REMARK 465 ALA A 109 REMARK 465 LEU A 110 REMARK 465 ASP A 111 REMARK 465 VAL A 112 REMARK 465 LYS A 151 REMARK 465 SER A 152 REMARK 465 GLU B 130 REMARK 465 ARG B 154 REMARK 465 ARG B 155 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 SER C 28 REMARK 465 ALA C 29 REMARK 465 PRO C 150 REMARK 465 LYS C 151 REMARK 465 SER C 152 REMARK 465 GLU D 130 REMARK 465 GLU D 131 REMARK 465 ARG D 154 REMARK 465 ARG D 155 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 29 CB REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 GLN A 105 CG CD OE1 NE2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 150 C O REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 GLU C 27 CG CD OE1 OE2 REMARK 470 LYS C 53 CG CD CE NZ REMARK 470 GLU C 76 CG CD OE1 OE2 REMARK 470 GLN C 105 CG CD OE1 NE2 REMARK 470 VAL C 112 CG1 CG2 REMARK 470 GLU C 149 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 142 -75.15 -133.61 REMARK 500 ASP C 111 81.80 -156.07 REMARK 500 TYR D 152 69.52 -114.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1150 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VOG RELATED DB: PDB REMARK 900 STRUCTURE OF MOUSE A1 BOUND TO THE BMF BH3-DOMAIN REMARK 900 RELATED ID: 2VOH RELATED DB: PDB REMARK 900 STRUCTURE OF MOUSE A1 BOUND TO THE BAK BH3-DOMAIN REMARK 900 RELATED ID: 2VOI RELATED DB: PDB REMARK 900 STRUCTURE OF MOUSE A1 BOUND TO THE BID BH3-DOMAIN DBREF 2VOF A -4 0 PDB 2VOF 2VOF -4 0 DBREF 2VOF A 1 152 UNP Q07440 B2LA1_MOUSE 1 152 DBREF 2VOF B 130 155 UNP Q99ML1 BBC3_MOUSE 130 155 DBREF 2VOF C -4 0 PDB 2VOF 2VOF -4 0 DBREF 2VOF C 1 152 UNP Q07440 B2LA1_MOUSE 1 152 DBREF 2VOF D 130 155 UNP Q99ML1 BBC3_MOUSE 130 155 SEQADV 2VOF LYS A 104 UNP Q07440 PRO 104 ENGINEERED MUTATION SEQADV 2VOF SER A 113 UNP Q07440 CYS 113 ENGINEERED MUTATION SEQADV 2VOF ILE B 144 UNP Q99ML1 MET 144 ENGINEERED MUTATION SEQADV 2VOF LYS C 104 UNP Q07440 PRO 104 ENGINEERED MUTATION SEQADV 2VOF SER C 113 UNP Q07440 CYS 113 ENGINEERED MUTATION SEQADV 2VOF ILE D 144 UNP Q99ML1 MET 144 ENGINEERED MUTATION SEQRES 1 A 157 GLY PRO LEU GLY SER MSE ALA GLU SER GLU LEU MSE HIS SEQRES 2 A 157 ILE HIS SER LEU ALA GLU HIS TYR LEU GLN TYR VAL LEU SEQRES 3 A 157 GLN VAL PRO ALA PHE GLU SER ALA PRO SER GLN ALA CYS SEQRES 4 A 157 ARG VAL LEU GLN ARG VAL ALA PHE SER VAL GLN LYS GLU SEQRES 5 A 157 VAL GLU LYS ASN LEU LYS SER TYR LEU ASP ASP PHE HIS SEQRES 6 A 157 VAL GLU SER ILE ASP THR ALA ARG ILE ILE PHE ASN GLN SEQRES 7 A 157 VAL MSE GLU LYS GLU PHE GLU ASP GLY ILE ILE ASN TRP SEQRES 8 A 157 GLY ARG ILE VAL THR ILE PHE ALA PHE GLY GLY VAL LEU SEQRES 9 A 157 LEU LYS LYS LEU LYS GLN GLU GLN ILE ALA LEU ASP VAL SEQRES 10 A 157 SER ALA TYR LYS GLN VAL SER SER PHE VAL ALA GLU PHE SEQRES 11 A 157 ILE MSE ASN ASN THR GLY GLU TRP ILE ARG GLN ASN GLY SEQRES 12 A 157 GLY TRP GLU ASP GLY PHE ILE LYS LYS PHE GLU PRO LYS SEQRES 13 A 157 SER SEQRES 1 B 26 GLU GLU GLU TRP ALA ARG GLU ILE GLY ALA GLN LEU ARG SEQRES 2 B 26 ARG ILE ALA ASP ASP LEU ASN ALA GLN TYR GLU ARG ARG SEQRES 1 C 157 GLY PRO LEU GLY SER MSE ALA GLU SER GLU LEU MSE HIS SEQRES 2 C 157 ILE HIS SER LEU ALA GLU HIS TYR LEU GLN TYR VAL LEU SEQRES 3 C 157 GLN VAL PRO ALA PHE GLU SER ALA PRO SER GLN ALA CYS SEQRES 4 C 157 ARG VAL LEU GLN ARG VAL ALA PHE SER VAL GLN LYS GLU SEQRES 5 C 157 VAL GLU LYS ASN LEU LYS SER TYR LEU ASP ASP PHE HIS SEQRES 6 C 157 VAL GLU SER ILE ASP THR ALA ARG ILE ILE PHE ASN GLN SEQRES 7 C 157 VAL MSE GLU LYS GLU PHE GLU ASP GLY ILE ILE ASN TRP SEQRES 8 C 157 GLY ARG ILE VAL THR ILE PHE ALA PHE GLY GLY VAL LEU SEQRES 9 C 157 LEU LYS LYS LEU LYS GLN GLU GLN ILE ALA LEU ASP VAL SEQRES 10 C 157 SER ALA TYR LYS GLN VAL SER SER PHE VAL ALA GLU PHE SEQRES 11 C 157 ILE MSE ASN ASN THR GLY GLU TRP ILE ARG GLN ASN GLY SEQRES 12 C 157 GLY TRP GLU ASP GLY PHE ILE LYS LYS PHE GLU PRO LYS SEQRES 13 C 157 SER SEQRES 1 D 26 GLU GLU GLU TRP ALA ARG GLU ILE GLY ALA GLN LEU ARG SEQRES 2 D 26 ARG ILE ALA ASP ASP LEU ASN ALA GLN TYR GLU ARG ARG MODRES 2VOF MSE A 1 MET SELENOMETHIONINE MODRES 2VOF MSE A 7 MET SELENOMETHIONINE MODRES 2VOF MSE A 75 MET SELENOMETHIONINE MODRES 2VOF MSE A 127 MET SELENOMETHIONINE MODRES 2VOF MSE C 1 MET SELENOMETHIONINE MODRES 2VOF MSE C 7 MET SELENOMETHIONINE MODRES 2VOF MSE C 75 MET SELENOMETHIONINE MODRES 2VOF MSE C 127 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 7 8 HET MSE A 75 8 HET MSE A 127 8 HET MSE C 1 8 HET MSE C 7 8 HET MSE C 75 8 HET MSE C 127 8 HET CL A1151 1 HET CL C1150 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *176(H2 O) HELIX 1 1 SER A 0 GLN A 22 1 23 HELIX 2 2 SER A 31 LEU A 52 1 22 HELIX 3 3 LEU A 52 ASP A 57 1 6 HELIX 4 4 SER A 63 GLU A 80 1 18 HELIX 5 5 ASN A 85 GLU A 106 1 22 HELIX 6 6 SER A 113 ASN A 137 1 25 HELIX 7 7 ASP A 142 PHE A 148 1 7 HELIX 8 8 GLU B 131 TYR B 152 1 22 HELIX 9 9 SER C 0 GLN C 22 1 23 HELIX 10 10 SER C 31 LEU C 52 1 22 HELIX 11 11 LEU C 52 ASP C 57 1 6 HELIX 12 12 SER C 63 GLU C 80 1 18 HELIX 13 13 ASN C 85 GLN C 107 1 23 HELIX 14 14 SER C 113 ASN C 137 1 25 HELIX 15 15 GLY C 138 GLY C 143 1 6 HELIX 16 16 GLY C 143 GLU C 149 1 7 HELIX 17 17 GLU D 132 TYR D 152 1 21 LINK C SER A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ALA A 2 1555 1555 1.34 LINK C LEU A 6 N MSE A 7 1555 1555 1.33 LINK C MSE A 7 N HIS A 8 1555 1555 1.33 LINK C VAL A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N GLU A 76 1555 1555 1.34 LINK C ILE A 126 N MSE A 127 1555 1555 1.33 LINK C MSE A 127 N ASN A 128 1555 1555 1.32 LINK C SER C 0 N MSE C 1 1555 1555 1.34 LINK C MSE C 1 N ALA C 2 1555 1555 1.33 LINK C LEU C 6 N MSE C 7 1555 1555 1.33 LINK C MSE C 7 N HIS C 8 1555 1555 1.33 LINK C VAL C 74 N MSE C 75 1555 1555 1.33 LINK C MSE C 75 N GLU C 76 1555 1555 1.34 LINK C ILE C 126 N MSE C 127 1555 1555 1.33 LINK C MSE C 127 N ASN C 128 1555 1555 1.33 SITE 1 AC1 3 HIS A 10 MSE C 7 HIS C 10 SITE 1 AC2 4 ASN C 85 TRP C 86 HOH C2076 ASN D 149 CRYST1 49.640 60.683 59.986 90.00 109.53 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020145 0.000000 0.007146 0.00000 SCALE2 0.000000 0.016479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017688 0.00000