HEADER IMMUNE SYSTEM 19-FEB-08 2VOK TITLE MURINE TRIM21 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 52 KDA RO PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRIM21, SJOEGREN SYNDROME TYPE A ANTIGEN, SS-A, RO(SS-A), 52 COMPND 5 KDA RIBONUCLEOPROTEIN AUTOANTIGEN RO/SS-A, TRIPARTITE MOTIF- COMPND 6 CONTAINING PROTEIN 21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLYMORPHISM, IMMUNE SYSTEM, METAL-BINDING, TRIPARTITE MOTIF (TRIM) KEYWDS 2 PROTEIN, SPRY SYSTEMIC LUPUS ERYTHEMATOSUS, ZINC, B30.2, RO.52, KEYWDS 3 NUCLEUS, PRYSPRY, CYTOPLASM, RIBONUCLEOPROTEIN, SYSTEMIC LUPUS KEYWDS 4 ERYTHEMATOSUS, ZINC-FINGER, DNA-BINDING, RNA-BINDING, COILED COIL EXPDTA X-RAY DIFFRACTION AUTHOR A.H.KEEBLE,Z.KHAN,A.FORSTER,L.C.JAMES REVDAT 4 07-FEB-24 2VOK 1 REMARK REVDAT 3 24-FEB-09 2VOK 1 VERSN REVDAT 2 06-MAY-08 2VOK 1 JRNL REMARK CRYST1 MASTER REVDAT 1 15-APR-08 2VOK 0 JRNL AUTH A.H.KEEBLE,Z.KHAN,A.FORSTER,L.C.JAMES JRNL TITL TRIM21 IS AN IGG RECEPTOR THAT IS STRUCTURALLY, JRNL TITL 2 THERMODYNAMICALLY, AND KINETICALLY CONSERVED. JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 6045 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18420815 JRNL DOI 10.1073/PNAS.0800159105 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0022 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 92549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 4636 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 5.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 67.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 914 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2995 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 481 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.49800 REMARK 3 B22 (A**2) : 0.68500 REMARK 3 B33 (A**2) : -0.95100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.34100 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.062 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.044 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3094 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3120 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4207 ; 1.270 ; 1.903 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7281 ; 3.145 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 369 ; 6.199 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;30.532 ;23.459 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 475 ;13.105 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.513 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 433 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2436 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 581 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1417 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3043 ; 0.241 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2087 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 17 ; 0.447 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 400 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.176 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 81 ; 0.311 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.127 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1883 ; 0.733 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2981 ; 1.230 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1405 ; 1.728 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1226 ; 2.460 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VOK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1290035382. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92548 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.44450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 1820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 193 REMARK 465 MET A 194 REMARK 465 ALA B 7 REMARK 465 LYS B 193 REMARK 465 MET B 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 113 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2133 O HOH A 2135 0.37 REMARK 500 CA GLY B 176 O HOH B 2241 0.39 REMARK 500 C GLY B 182 O HOH B 2258 0.40 REMARK 500 CD2 HIS A 9 O HOH A 2003 0.44 REMARK 500 CB ARG A 64 O HOH A 2081 0.48 REMARK 500 CG ASP B 75 O HOH B 2123 0.50 REMARK 500 CG GLU A 80 O HOH A 2099 0.51 REMARK 500 O HOH B 2250 O HOH B 2251 0.52 REMARK 500 CA VAL B 15 O HOH B 2028 0.54 REMARK 500 N GLY B 118 O HOH B 2190 0.56 REMARK 500 NE2 HIS B 9 O HOH B 2007 0.57 REMARK 500 NE1 TRP A 109 O HOH A 2132 0.59 REMARK 500 CB ILE A 17 O HOH A 2022 0.60 REMARK 500 NZ LYS A 32 O HOH A 2040 0.60 REMARK 500 CD GLU B 162 O HOH B 2228 0.64 REMARK 500 C ILE A 29 O HOH A 2036 0.64 REMARK 500 NH1 ARG B 52 O HOH B 2091 0.64 REMARK 500 C LEU B 60 O HOH B 2100 0.64 REMARK 500 CG2 VAL A 46 O HOH A 2057 0.65 REMARK 500 O SER A 67 O HOH A 2089 0.65 REMARK 500 CG MET A 70 O HOH A 2090 0.65 REMARK 500 N VAL B 164 O HOH B 2233 0.65 REMARK 500 CB PHE A 65 O HOH A 2083 0.66 REMARK 500 OG SER A 47 O HOH A 2059 0.67 REMARK 500 CD GLN A 44 O HOH A 2055 0.67 REMARK 500 CD1 TRP B 106 O HOH B 2173 0.70 REMARK 500 O GLY B 167 O HOH B 2234 0.72 REMARK 500 CA ASP A 113 O HOH A 2139 0.72 REMARK 500 CD GLU A 51 O HOH A 2068 0.73 REMARK 500 CG HIS A 11 O HOH A 2008 0.74 REMARK 500 C PHE B 177 O HOH B 2243 0.75 REMARK 500 CG GLU A 51 O HOH A 2071 0.76 REMARK 500 ND1 HIS B 11 O HOH B 2015 0.76 REMARK 500 CD PRO A 57 O HOH A 2077 0.76 REMARK 500 NE2 GLN A 36 O HOH A 2045 0.77 REMARK 500 CE1 HIS B 9 O HOH B 2007 0.78 REMARK 500 CE1 HIS B 11 O HOH B 2014 0.79 REMARK 500 C ALA B 117 O HOH B 2190 0.80 REMARK 500 CB ALA A 117 O HOH A 2150 0.80 REMARK 500 NE2 GLN B 36 O HOH B 2065 0.80 REMARK 500 C GLU B 80 O HOH B 2130 0.83 REMARK 500 CA MET B 14 O HOH B 2026 0.83 REMARK 500 C ALA A 166 O HOH A 2186 0.84 REMARK 500 O HOH A 2028 O HOH A 2029 0.84 REMARK 500 CA ASP B 89 O HOH B 2135 0.85 REMARK 500 CG TRP B 106 O HOH B 2173 0.85 REMARK 500 CA LEU A 192 O HOH A 2215 0.85 REMARK 500 ND2 ASN B 174 O HOH B 2238 0.86 REMARK 500 CD GLN A 36 O HOH A 2045 0.86 REMARK 500 N LEU A 169 O HOH A 2188 0.87 REMARK 500 REMARK 500 THIS ENTRY HAS 636 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2009 O HOH B 2017 1554 1.35 REMARK 500 O SER B 180 O HOH B 2055 2554 1.39 REMARK 500 CA SER B 90 O HOH B 2220 2444 1.53 REMARK 500 SD MET A 14 O HOH B 2021 1554 1.54 REMARK 500 CD2 HIS B 11 O HOH A 2012 1556 1.83 REMARK 500 CA SER B 90 O HOH B 2223 2444 1.85 REMARK 500 C SER B 180 O HOH B 2055 2554 1.95 REMARK 500 CG HIS B 11 O HOH A 2012 1556 2.04 REMARK 500 CG2 THR B 123 O HOH B 2113 2454 2.06 REMARK 500 O LEU A 192 O HOH B 2022 1554 2.11 REMARK 500 CB HIS B 11 O HOH A 2012 1556 2.12 REMARK 500 CE MET A 14 O HOH B 2021 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 191 C - N - CA ANGL. DEV. = 12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 44 40.24 -103.36 REMARK 500 GLN A 78 -2.01 74.69 REMARK 500 ASP A 152 69.22 -117.37 REMARK 500 ASN A 178 50.95 -146.12 REMARK 500 PRO A 191 11.75 -52.95 REMARK 500 GLN B 78 -20.53 80.73 REMARK 500 HIS B 126 55.85 -116.72 REMARK 500 ASP B 152 56.24 -103.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2050 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH B2064 DISTANCE = 5.83 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2IWG RELATED DB: PDB REMARK 900 COMPLEX BETWEEN THE PRYSPRY DOMAIN OF TRIM21 AND IGG FC REMARK 900 RELATED ID: 2VOL RELATED DB: PDB REMARK 900 MURINE TRIM21 IN COMPLEX WITH MURINE IGG FC DBREF 2VOK A 7 14 PDB 2VOK 2VOK 7 14 DBREF 2VOK A 15 194 UNP Q62191 RO52_MOUSE 291 470 DBREF 2VOK B 7 14 PDB 2VOK 2VOK 7 14 DBREF 2VOK B 15 194 UNP Q62191 RO52_MOUSE 291 470 SEQRES 1 A 188 ALA HIS HIS HIS HIS HIS HIS MET VAL HIS ILE THR LEU SEQRES 2 A 188 ASP ARG ASN THR ALA ASN SER TRP LEU ILE ILE SER LYS SEQRES 3 A 188 ASP ARG ARG GLN VAL ARG MET GLY ASP THR HIS GLN ASN SEQRES 4 A 188 VAL SER ASP ASN LYS GLU ARG PHE SER ASN TYR PRO MET SEQRES 5 A 188 VAL LEU GLY ALA GLN ARG PHE SER SER GLY LYS MET TYR SEQRES 6 A 188 TRP GLU VAL ASP VAL THR GLN LYS GLU ALA TRP ASP LEU SEQRES 7 A 188 GLY VAL CYS ARG ASP SER VAL GLN ARG LYS GLY GLN PHE SEQRES 8 A 188 SER LEU SER PRO GLU ASN GLY PHE TRP THR ILE TRP LEU SEQRES 9 A 188 TRP GLN ASP SER TYR GLU ALA GLY THR SER PRO GLN THR SEQRES 10 A 188 THR LEU HIS ILE GLN VAL PRO PRO CYS GLN ILE GLY ILE SEQRES 11 A 188 PHE VAL ASP TYR GLU ALA GLY VAL VAL SER PHE TYR ASN SEQRES 12 A 188 ILE THR ASP HIS GLY SER LEU ILE TYR THR PHE SER GLU SEQRES 13 A 188 CYS VAL PHE ALA GLY PRO LEU ARG PRO PHE PHE ASN VAL SEQRES 14 A 188 GLY PHE ASN TYR SER GLY GLY ASN ALA ALA PRO LEU LYS SEQRES 15 A 188 LEU CYS PRO LEU LYS MET SEQRES 1 B 188 ALA HIS HIS HIS HIS HIS HIS MET VAL HIS ILE THR LEU SEQRES 2 B 188 ASP ARG ASN THR ALA ASN SER TRP LEU ILE ILE SER LYS SEQRES 3 B 188 ASP ARG ARG GLN VAL ARG MET GLY ASP THR HIS GLN ASN SEQRES 4 B 188 VAL SER ASP ASN LYS GLU ARG PHE SER ASN TYR PRO MET SEQRES 5 B 188 VAL LEU GLY ALA GLN ARG PHE SER SER GLY LYS MET TYR SEQRES 6 B 188 TRP GLU VAL ASP VAL THR GLN LYS GLU ALA TRP ASP LEU SEQRES 7 B 188 GLY VAL CYS ARG ASP SER VAL GLN ARG LYS GLY GLN PHE SEQRES 8 B 188 SER LEU SER PRO GLU ASN GLY PHE TRP THR ILE TRP LEU SEQRES 9 B 188 TRP GLN ASP SER TYR GLU ALA GLY THR SER PRO GLN THR SEQRES 10 B 188 THR LEU HIS ILE GLN VAL PRO PRO CYS GLN ILE GLY ILE SEQRES 11 B 188 PHE VAL ASP TYR GLU ALA GLY VAL VAL SER PHE TYR ASN SEQRES 12 B 188 ILE THR ASP HIS GLY SER LEU ILE TYR THR PHE SER GLU SEQRES 13 B 188 CYS VAL PHE ALA GLY PRO LEU ARG PRO PHE PHE ASN VAL SEQRES 14 B 188 GLY PHE ASN TYR SER GLY GLY ASN ALA ALA PRO LEU LYS SEQRES 15 B 188 LEU CYS PRO LEU LYS MET FORMUL 3 HOH *481(H2 O) HELIX 1 1 HIS A 10 HIS A 13 5 4 HELIX 2 2 ASP A 20 ALA A 24 5 5 HELIX 3 3 HIS B 10 HIS B 13 5 4 HELIX 4 4 ASP B 20 ALA B 24 5 5 HELIX 5 5 SER B 100 ASN B 103 5 4 SHEET 1 AA 7 LEU A 28 ILE A 30 0 SHEET 2 AA 7 GLN A 36 MET A 39 -1 O ARG A 38 N ILE A 29 SHEET 3 AA 7 LEU A 187 LEU A 189 -1 O LEU A 187 N VAL A 37 SHEET 4 AA 7 LYS A 69 ASP A 75 -1 O ASP A 75 N LYS A 188 SHEET 5 AA 7 GLN A 133 ASP A 139 -1 O ILE A 134 N VAL A 74 SHEET 6 AA 7 VAL A 144 ASN A 149 -1 O VAL A 144 N ASP A 139 SHEET 7 AA 7 SER A 155 PHE A 160 -1 O SER A 155 N ASN A 149 SHEET 1 AB 6 MET A 58 LEU A 60 0 SHEET 2 AB 6 LEU A 169 ASN A 174 -1 O PHE A 173 N VAL A 59 SHEET 3 AB 6 TRP A 82 ARG A 88 -1 O ASP A 83 N ASN A 174 SHEET 4 AB 6 PHE A 105 TRP A 111 -1 O TRP A 106 N VAL A 86 SHEET 5 AB 6 SER A 114 ALA A 117 -1 O SER A 114 N TRP A 111 SHEET 6 AB 6 THR A 123 LEU A 125 -1 O THR A 123 N ALA A 117 SHEET 1 BA 7 LEU B 28 ILE B 30 0 SHEET 2 BA 7 GLN B 36 MET B 39 -1 O ARG B 38 N ILE B 29 SHEET 3 BA 7 LEU B 187 LEU B 189 -1 O LEU B 187 N VAL B 37 SHEET 4 BA 7 LYS B 69 ASP B 75 -1 O ASP B 75 N LYS B 188 SHEET 5 BA 7 GLN B 133 ASP B 139 -1 O ILE B 134 N VAL B 74 SHEET 6 BA 7 VAL B 144 ASN B 149 -1 O VAL B 144 N ASP B 139 SHEET 7 BA 7 SER B 155 PHE B 160 -1 O SER B 155 N ASN B 149 SHEET 1 BB 6 MET B 58 LEU B 60 0 SHEET 2 BB 6 LEU B 169 ASN B 174 -1 O PHE B 173 N VAL B 59 SHEET 3 BB 6 TRP B 82 ARG B 88 -1 O ASP B 83 N ASN B 174 SHEET 4 BB 6 PHE B 105 TRP B 111 -1 O TRP B 106 N VAL B 86 SHEET 5 BB 6 SER B 114 ALA B 117 -1 O SER B 114 N TRP B 111 SHEET 6 BB 6 THR B 123 THR B 124 -1 O THR B 123 N ALA B 117 CISPEP 1 SER A 120 PRO A 121 0 -0.65 CISPEP 2 SER B 120 PRO B 121 0 -5.94 CRYST1 62.955 44.889 71.794 90.00 109.89 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015884 0.000000 0.005747 0.00000 SCALE2 0.000000 0.022277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014812 0.00000