HEADER HYDROLASE 18-MAR-08 2VQU TITLE STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION STATE TITLE 2 IN BETA-MANNOSIDASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-MANNOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 26-864; COMPND 5 EC: 3.2.1.25; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 VARIANT: VPI-5482; SOURCE 5 ATCC: 29148; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS LINEAR FREE ENERGY RELATIONSHIP, TRANSITION STATE MIMIC, MANNOSIDASE, KEYWDS 2 GLYCOSIDE HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.E.TAILFORD,W.A.OFFEN,N.L.SMITH,C.DUMON,C.MORELAND,J.GRATIEN, AUTHOR 2 M.P.HECK,R.V.STICK,Y.BLERIOT,A.VASELLA,H.J.GILBERT,G.J.DAVIES REVDAT 4 13-DEC-23 2VQU 1 REMARK REVDAT 3 24-FEB-09 2VQU 1 VERSN REVDAT 2 22-APR-08 2VQU 1 AUTHOR JRNL REVDAT 1 01-APR-08 2VQU 0 JRNL AUTH L.E.TAILFORD,W.A.OFFEN,N.L.SMITH,C.DUMON,C.MORLAND, JRNL AUTH 2 J.GRATIEN,M.P.HECK,R.V.STICK,Y.BLERIOT,A.VASELLA, JRNL AUTH 3 H.J.GILBERT,G.J.DAVIES JRNL TITL STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE JRNL TITL 2 TRANSITION STATE IN BETA-MANNOSIDASES. JRNL REF NAT.CHEM.BIOL. V. 4 306 2008 JRNL REFN ISSN 1552-4450 JRNL PMID 18408714 JRNL DOI 10.1038/NCHEMBIO.81 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0065 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 140442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7418 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10375 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 550 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13500 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 262 REMARK 3 SOLVENT ATOMS : 1230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.61000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.526 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 14451 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19587 ; 1.575 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1760 ; 6.888 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 705 ;37.261 ;24.156 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2338 ;14.466 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 79 ;19.181 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2069 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11139 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8581 ; 0.786 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 13942 ; 1.312 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5870 ; 2.238 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5620 ; 3.276 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES 26-27, 318 AND 865-871 ARE DISORDERED IN REMARK 3 CHAIN A, AND RESIDUES 26-27 AND 868-871 ARE DISORDERED IN CHAIN REMARK 3 B. REMARK 4 REMARK 4 2VQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1290035560. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 150972 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2JE8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350, 0.2M NABR, 0.1M MES PH REMARK 280 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.55000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TRP 645 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, TRP 645 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 26 REMARK 465 GLY A 27 REMARK 465 ASP A 318 REMARK 465 GLU A 865 REMARK 465 HIS A 866 REMARK 465 HIS A 867 REMARK 465 HIS A 868 REMARK 465 HIS A 869 REMARK 465 HIS A 870 REMARK 465 HIS A 871 REMARK 465 GLN B 26 REMARK 465 GLY B 27 REMARK 465 HIS B 868 REMARK 465 HIS B 869 REMARK 465 HIS B 870 REMARK 465 HIS B 871 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 161 CZ NH1 NH2 REMARK 470 LYS A 273 CE NZ REMARK 470 LYS A 435 CD CE NZ REMARK 470 LYS A 474 CD CE NZ REMARK 470 LYS A 475 CE NZ REMARK 470 GLN A 482 CD OE1 NE2 REMARK 470 LYS A 501 CD CE NZ REMARK 470 ILE A 591 CG1 CG2 CD1 REMARK 470 ARG A 597 CZ NH1 NH2 REMARK 470 LYS A 717 CE NZ REMARK 470 LYS A 721 CB CG CD CE NZ REMARK 470 LYS A 736 NZ REMARK 470 ARG A 740 NH1 NH2 REMARK 470 LYS A 742 CD CE NZ REMARK 470 GLU A 750 CD OE1 OE2 REMARK 470 ARG A 754 CZ NH1 NH2 REMARK 470 LYS A 762 CE NZ REMARK 470 LYS A 764 CE NZ REMARK 470 GLN A 792 CG CD OE1 NE2 REMARK 470 LYS A 794 CG CD CE NZ REMARK 470 ARG A 836 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 838 CE NZ REMARK 470 ARG A 845 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 847 CG CD CE NZ REMARK 470 LYS A 848 NZ REMARK 470 GLU A 850 CB CG CD OE1 OE2 REMARK 470 GLU A 851 CB CG CD OE1 OE2 REMARK 470 LYS A 864 CE NZ REMARK 470 GLU B 48 CD OE1 OE2 REMARK 470 LYS B 79 CD CE NZ REMARK 470 GLU B 473 CG CD OE1 OE2 REMARK 470 LYS B 474 CD CE NZ REMARK 470 LYS B 475 CE NZ REMARK 470 LYS B 501 CD CE NZ REMARK 470 ILE B 578 CD1 REMARK 470 LYS B 721 CB CG CD CE NZ REMARK 470 LYS B 722 CE NZ REMARK 470 ARG B 740 CZ NH1 NH2 REMARK 470 LYS B 742 CE NZ REMARK 470 GLU B 750 CG CD OE1 OE2 REMARK 470 ARG B 754 NE CZ NH1 NH2 REMARK 470 LYS B 758 CD CE NZ REMARK 470 LYS B 764 CB CG CD CE NZ REMARK 470 GLN B 792 CG CD OE1 NE2 REMARK 470 LYS B 799 CE NZ REMARK 470 GLU B 801 CD OE1 OE2 REMARK 470 ARG B 836 CD NE CZ NH1 NH2 REMARK 470 ARG B 845 CD NE CZ NH1 NH2 REMARK 470 LYS B 847 CG CD CE NZ REMARK 470 LYS B 848 CB CG CD CE NZ REMARK 470 GLU B 851 N REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 865 CG GLU B 865 CD -0.101 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 521 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASN A 584 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 -8.82 -57.00 REMARK 500 THR A 116 -52.18 -136.56 REMARK 500 ASP A 131 28.38 -151.91 REMARK 500 ILE A 220 -66.11 69.20 REMARK 500 SER A 429 27.45 -145.98 REMARK 500 GLU A 494 -72.17 -129.70 REMARK 500 LEU A 516 -42.68 -142.52 REMARK 500 TRP A 536 -96.22 84.07 REMARK 500 LYS A 539 14.31 59.77 REMARK 500 GLU A 574 9.54 -65.95 REMARK 500 ALA A 585 -85.47 122.45 REMARK 500 ALA A 585 -82.48 80.75 REMARK 500 HIS A 586 53.39 -117.32 REMARK 500 SER A 843 133.00 -176.30 REMARK 500 GLU A 850 56.96 22.29 REMARK 500 ASN B 71 109.51 -44.95 REMARK 500 THR B 116 -54.71 -138.70 REMARK 500 LEU B 128 131.40 -170.20 REMARK 500 ASP B 131 27.04 -149.65 REMARK 500 ALA B 192 109.93 -47.22 REMARK 500 ILE B 220 -62.38 74.38 REMARK 500 SER B 429 19.04 -144.53 REMARK 500 GLU B 494 -69.66 -125.64 REMARK 500 GLU B 494 -71.65 -123.45 REMARK 500 ASP B 504 58.08 -149.34 REMARK 500 LEU B 516 -36.83 -143.54 REMARK 500 LEU B 516 -47.38 -137.88 REMARK 500 TRP B 536 -94.99 83.97 REMARK 500 LYS B 539 16.05 56.16 REMARK 500 ASP B 688 51.66 30.95 REMARK 500 THR B 796 -162.26 -122.67 REMARK 500 LYS B 848 117.27 -32.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2014 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH B2054 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH B2157 DISTANCE = 6.11 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1865 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1868 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NOY A1866 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1867 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NOY B1869 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1870 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1868 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1872 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1869 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1870 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1871 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1872 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1873 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1874 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1873 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1874 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1875 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1875 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1876 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1876 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1877 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1878 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1877 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1879 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1878 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1879 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1880 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1881 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1880 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1881 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1882 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1882 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1883 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1884 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1885 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1886 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1887 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1883 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1884 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B1888 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1885 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B1889 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1887 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1890 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1888 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1889 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1904 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1891 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1895 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1892 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1891 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1892 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B1893 REMARK 800 REMARK 800 SITE_IDENTIFIER: FC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1894 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1893 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1894 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B1896 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1896 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1897 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1898 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1897 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: GC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1903 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1898 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1899 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1904 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1905 REMARK 800 REMARK 800 SITE_IDENTIFIER: HC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: IC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1906 REMARK 800 REMARK 800 SITE_IDENTIFIER: IC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1907 REMARK 800 REMARK 800 SITE_IDENTIFIER: IC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1903 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VOT RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 900 RELATED ID: 2VQT RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 900 RELATED ID: 2VL4 RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 900 RELATED ID: 2VO5 RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 900 RELATED ID: 2JE8 RELATED DB: PDB REMARK 900 STRUCTURE OF A BETA-MANNOSIDASE FROM BACTEROIDES THETAIOTAOMICRON REMARK 900 RELATED ID: 2VJX RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 900 RELATED ID: 2VMF RELATED DB: PDB REMARK 900 STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION REMARK 900 STATE IN BETA- MANNOSIDASES REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS AN ENGINEERED MUTATION IN THE SEQUENCE, W645A. DBREF 2VQU A 26 864 UNP Q8AAK6 Q8AAK6_BACTN 26 864 DBREF 2VQU A 865 871 PDB 2VQU 2VQU 865 871 DBREF 2VQU B 26 864 UNP Q8AAK6 Q8AAK6_BACTN 26 864 DBREF 2VQU B 865 871 PDB 2VQU 2VQU 865 871 SEQADV 2VQU ALA A 645 UNP Q8AAK6 TRP 645 ENGINEERED MUTATION SEQADV 2VQU ALA B 645 UNP Q8AAK6 TRP 645 ENGINEERED MUTATION SEQRES 1 A 846 GLN GLY ASN ASP THR SER GLU VAL MET LEU LEU ASP THR SEQRES 2 A 846 GLY TRP GLU PHE SER GLN SER GLY THR GLU LYS TRP MET SEQRES 3 A 846 PRO ALA THR VAL PRO GLY THR VAL HIS GLN ASP LEU ILE SEQRES 4 A 846 SER HIS GLU LEU LEU PRO ASN PRO PHE TYR GLY MET ASN SEQRES 5 A 846 GLU LYS LYS ILE GLN TRP VAL GLU ASN GLU ASP TRP GLU SEQRES 6 A 846 TYR ARG THR SER PHE ILE VAL SER GLU GLU GLN LEU ASN SEQRES 7 A 846 ARG ASP GLY ILE GLN LEU ILE PHE GLU GLY LEU ASP THR SEQRES 8 A 846 TYR ALA ASP VAL TYR LEU ASN GLY SER LEU LEU LEU LYS SEQRES 9 A 846 ALA ASP ASN MET PHE VAL GLY TYR THR LEU PRO VAL LYS SEQRES 10 A 846 SER VAL LEU ARG LYS GLY GLU ASN HIS LEU TYR ILE TYR SEQRES 11 A 846 PHE HIS SER PRO ILE ARG GLN THR LEU PRO GLN TYR ALA SEQRES 12 A 846 SER ASN GLY PHE ASN TYR PRO ALA ASP ASN ASP HIS HIS SEQRES 13 A 846 GLU LYS HIS LEU SER VAL PHE SER ARG LYS ALA PRO TYR SEQRES 14 A 846 SER TYR GLY TRP ASP TRP GLY ILE ARG MET VAL THR SER SEQRES 15 A 846 GLY VAL TRP ARG PRO VAL THR LEU ARG PHE TYR ASP ILE SEQRES 16 A 846 ALA THR ILE SER ASP TYR TYR VAL ARG GLN LEU SER LEU SEQRES 17 A 846 THR ASP GLU ASN ALA ARG LEU SER ASN GLU LEU ILE VAL SEQRES 18 A 846 ASN GLN ILE VAL PRO GLN LYS ILE PRO ALA GLU VAL ARG SEQRES 19 A 846 VAL ASN VAL SER LEU ASN GLY THR THR VAL THR GLU VAL SEQRES 20 A 846 LYS GLN GLN VAL THR LEU GLN PRO GLY ILE ASN HIS ILE SEQRES 21 A 846 THR LEU PRO ALA GLU VAL THR ASN PRO VAL ARG TRP MET SEQRES 22 A 846 PRO ASN GLY TRP GLY THR PRO THR LEU TYR ASP PHE SER SEQRES 23 A 846 ALA GLN ILE ALA CYS GLY ASP ARG ILE VAL ALA GLU GLN SEQRES 24 A 846 SER HIS ARG ILE GLY LEU ARG THR ILE ARG VAL VAL ASN SEQRES 25 A 846 GLU LYS ASP LYS ASP GLY GLU SER PHE TYR PHE GLU VAL SEQRES 26 A 846 ASN GLY ILE PRO MET PHE ALA LYS GLY ALA ASN TYR ILE SEQRES 27 A 846 PRO GLN ASP ALA LEU LEU PRO ASN VAL THR THR GLU ARG SEQRES 28 A 846 TYR GLN THR LEU PHE ARG ASP MET LYS GLU ALA ASN MET SEQRES 29 A 846 ASN MET VAL ARG ILE TRP GLY GLY GLY THR TYR GLU ASN SEQRES 30 A 846 ASN LEU PHE TYR ASP LEU ALA ASP GLU ASN GLY ILE LEU SEQRES 31 A 846 VAL TRP GLN ASP PHE MET PHE ALA CYS THR PRO TYR PRO SEQRES 32 A 846 SER ASP PRO THR PHE LEU LYS ARG VAL GLU ALA GLU ALA SEQRES 33 A 846 VAL TYR ASN ILE ARG ARG LEU ARG ASN HIS ALA SER LEU SEQRES 34 A 846 ALA MET TRP CYS GLY ASN ASN GLU ILE LEU GLU ALA LEU SEQRES 35 A 846 LYS TYR TRP GLY PHE GLU LYS LYS PHE THR PRO GLU VAL SEQRES 36 A 846 TYR GLN GLY LEU MET HIS GLY TYR ASP LYS LEU PHE ARG SEQRES 37 A 846 GLU LEU LEU PRO SER THR VAL LYS GLU PHE ASP SER ASP SEQRES 38 A 846 ARG PHE TYR VAL HIS SER SER PRO TYR LEU ALA ASN TRP SEQRES 39 A 846 GLY ARG PRO GLU SER TRP GLY THR GLY ASP SER HIS ASN SEQRES 40 A 846 TRP GLY VAL TRP TYR GLY LYS LYS PRO PHE GLU SER LEU SEQRES 41 A 846 ASP THR ASP LEU PRO ARG PHE MET SER GLU PHE GLY PHE SEQRES 42 A 846 GLN SER PHE PRO GLU MET LYS THR ILE ALA ALA PHE ALA SEQRES 43 A 846 ALA PRO GLU ASP TYR GLN ILE GLU SER GLU VAL MET ASN SEQRES 44 A 846 ALA HIS GLN LYS SER SER ILE GLY ASN SER LEU ILE ARG SEQRES 45 A 846 THR TYR MET GLU ARG ASP TYR ILE ILE PRO GLU SER PHE SEQRES 46 A 846 GLU ASP PHE VAL TYR VAL GLY LEU VAL LEU GLN GLY GLN SEQRES 47 A 846 GLY MET ARG HIS GLY LEU GLU ALA HIS ARG ARG ASN ARG SEQRES 48 A 846 PRO TYR CYS MET GLY THR LEU TYR ALA GLN LEU ASN ASP SEQRES 49 A 846 SER TRP PRO VAL VAL SER TRP SER SER ILE ASP TYR TYR SEQRES 50 A 846 GLY ASN TRP LYS ALA LEU HIS TYR GLN ALA LYS ARG ALA SEQRES 51 A 846 PHE ALA PRO VAL LEU ILE ASN PRO ILE GLN GLN ASN ASP SEQRES 52 A 846 SER LEU SER VAL TYR LEU ILE SER ASP ARG LEU ASP THR SEQRES 53 A 846 MET GLU GLN MET THR LEU GLU MET LYS VAL VAL ASP PHE SEQRES 54 A 846 ASP GLY LYS THR LEU GLY LYS LYS ILE GLN VAL HIS SER SEQRES 55 A 846 LEU GLU VAL PRO ALA ASN THR SER LYS CYS VAL TYR ARG SEQRES 56 A 846 ALA LYS LEU ASP GLY TRP LEU THR PRO GLU ASP CYS ARG SEQRES 57 A 846 ARG SER PHE LEU LYS LEU ILE LEU LYS ASP LYS SER GLY SEQRES 58 A 846 HIS GLN VAL ALA GLU SER VAL HIS PHE PHE ARG LYS THR SEQRES 59 A 846 LYS ASP LEU GLN LEU PRO PRO THR SER VAL SER TYR GLN SEQRES 60 A 846 MET LYS GLN THR ASP GLY LYS CYS GLU LEU THR LEU PHE SEQRES 61 A 846 SER SER MET LEU ALA LYS ASP ILE PHE ILE GLU THR PRO SEQRES 62 A 846 LEU GLN GLY ALA ARG TYR SER ASP ASN PHE PHE ASP LEU SEQRES 63 A 846 LEU PRO GLY GLU ARG LYS LYS VAL ILE ILE THR SER PRO SEQRES 64 A 846 ARG ILE LYS LYS GLY GLU GLU LEU PRO VAL ASN ILE LYS SEQRES 65 A 846 HIS ILE ARG GLU THR TYR LYS GLU HIS HIS HIS HIS HIS SEQRES 66 A 846 HIS SEQRES 1 B 846 GLN GLY ASN ASP THR SER GLU VAL MET LEU LEU ASP THR SEQRES 2 B 846 GLY TRP GLU PHE SER GLN SER GLY THR GLU LYS TRP MET SEQRES 3 B 846 PRO ALA THR VAL PRO GLY THR VAL HIS GLN ASP LEU ILE SEQRES 4 B 846 SER HIS GLU LEU LEU PRO ASN PRO PHE TYR GLY MET ASN SEQRES 5 B 846 GLU LYS LYS ILE GLN TRP VAL GLU ASN GLU ASP TRP GLU SEQRES 6 B 846 TYR ARG THR SER PHE ILE VAL SER GLU GLU GLN LEU ASN SEQRES 7 B 846 ARG ASP GLY ILE GLN LEU ILE PHE GLU GLY LEU ASP THR SEQRES 8 B 846 TYR ALA ASP VAL TYR LEU ASN GLY SER LEU LEU LEU LYS SEQRES 9 B 846 ALA ASP ASN MET PHE VAL GLY TYR THR LEU PRO VAL LYS SEQRES 10 B 846 SER VAL LEU ARG LYS GLY GLU ASN HIS LEU TYR ILE TYR SEQRES 11 B 846 PHE HIS SER PRO ILE ARG GLN THR LEU PRO GLN TYR ALA SEQRES 12 B 846 SER ASN GLY PHE ASN TYR PRO ALA ASP ASN ASP HIS HIS SEQRES 13 B 846 GLU LYS HIS LEU SER VAL PHE SER ARG LYS ALA PRO TYR SEQRES 14 B 846 SER TYR GLY TRP ASP TRP GLY ILE ARG MET VAL THR SER SEQRES 15 B 846 GLY VAL TRP ARG PRO VAL THR LEU ARG PHE TYR ASP ILE SEQRES 16 B 846 ALA THR ILE SER ASP TYR TYR VAL ARG GLN LEU SER LEU SEQRES 17 B 846 THR ASP GLU ASN ALA ARG LEU SER ASN GLU LEU ILE VAL SEQRES 18 B 846 ASN GLN ILE VAL PRO GLN LYS ILE PRO ALA GLU VAL ARG SEQRES 19 B 846 VAL ASN VAL SER LEU ASN GLY THR THR VAL THR GLU VAL SEQRES 20 B 846 LYS GLN GLN VAL THR LEU GLN PRO GLY ILE ASN HIS ILE SEQRES 21 B 846 THR LEU PRO ALA GLU VAL THR ASN PRO VAL ARG TRP MET SEQRES 22 B 846 PRO ASN GLY TRP GLY THR PRO THR LEU TYR ASP PHE SER SEQRES 23 B 846 ALA GLN ILE ALA CYS GLY ASP ARG ILE VAL ALA GLU GLN SEQRES 24 B 846 SER HIS ARG ILE GLY LEU ARG THR ILE ARG VAL VAL ASN SEQRES 25 B 846 GLU LYS ASP LYS ASP GLY GLU SER PHE TYR PHE GLU VAL SEQRES 26 B 846 ASN GLY ILE PRO MET PHE ALA LYS GLY ALA ASN TYR ILE SEQRES 27 B 846 PRO GLN ASP ALA LEU LEU PRO ASN VAL THR THR GLU ARG SEQRES 28 B 846 TYR GLN THR LEU PHE ARG ASP MET LYS GLU ALA ASN MET SEQRES 29 B 846 ASN MET VAL ARG ILE TRP GLY GLY GLY THR TYR GLU ASN SEQRES 30 B 846 ASN LEU PHE TYR ASP LEU ALA ASP GLU ASN GLY ILE LEU SEQRES 31 B 846 VAL TRP GLN ASP PHE MET PHE ALA CYS THR PRO TYR PRO SEQRES 32 B 846 SER ASP PRO THR PHE LEU LYS ARG VAL GLU ALA GLU ALA SEQRES 33 B 846 VAL TYR ASN ILE ARG ARG LEU ARG ASN HIS ALA SER LEU SEQRES 34 B 846 ALA MET TRP CYS GLY ASN ASN GLU ILE LEU GLU ALA LEU SEQRES 35 B 846 LYS TYR TRP GLY PHE GLU LYS LYS PHE THR PRO GLU VAL SEQRES 36 B 846 TYR GLN GLY LEU MET HIS GLY TYR ASP LYS LEU PHE ARG SEQRES 37 B 846 GLU LEU LEU PRO SER THR VAL LYS GLU PHE ASP SER ASP SEQRES 38 B 846 ARG PHE TYR VAL HIS SER SER PRO TYR LEU ALA ASN TRP SEQRES 39 B 846 GLY ARG PRO GLU SER TRP GLY THR GLY ASP SER HIS ASN SEQRES 40 B 846 TRP GLY VAL TRP TYR GLY LYS LYS PRO PHE GLU SER LEU SEQRES 41 B 846 ASP THR ASP LEU PRO ARG PHE MET SER GLU PHE GLY PHE SEQRES 42 B 846 GLN SER PHE PRO GLU MET LYS THR ILE ALA ALA PHE ALA SEQRES 43 B 846 ALA PRO GLU ASP TYR GLN ILE GLU SER GLU VAL MET ASN SEQRES 44 B 846 ALA HIS GLN LYS SER SER ILE GLY ASN SER LEU ILE ARG SEQRES 45 B 846 THR TYR MET GLU ARG ASP TYR ILE ILE PRO GLU SER PHE SEQRES 46 B 846 GLU ASP PHE VAL TYR VAL GLY LEU VAL LEU GLN GLY GLN SEQRES 47 B 846 GLY MET ARG HIS GLY LEU GLU ALA HIS ARG ARG ASN ARG SEQRES 48 B 846 PRO TYR CYS MET GLY THR LEU TYR ALA GLN LEU ASN ASP SEQRES 49 B 846 SER TRP PRO VAL VAL SER TRP SER SER ILE ASP TYR TYR SEQRES 50 B 846 GLY ASN TRP LYS ALA LEU HIS TYR GLN ALA LYS ARG ALA SEQRES 51 B 846 PHE ALA PRO VAL LEU ILE ASN PRO ILE GLN GLN ASN ASP SEQRES 52 B 846 SER LEU SER VAL TYR LEU ILE SER ASP ARG LEU ASP THR SEQRES 53 B 846 MET GLU GLN MET THR LEU GLU MET LYS VAL VAL ASP PHE SEQRES 54 B 846 ASP GLY LYS THR LEU GLY LYS LYS ILE GLN VAL HIS SER SEQRES 55 B 846 LEU GLU VAL PRO ALA ASN THR SER LYS CYS VAL TYR ARG SEQRES 56 B 846 ALA LYS LEU ASP GLY TRP LEU THR PRO GLU ASP CYS ARG SEQRES 57 B 846 ARG SER PHE LEU LYS LEU ILE LEU LYS ASP LYS SER GLY SEQRES 58 B 846 HIS GLN VAL ALA GLU SER VAL HIS PHE PHE ARG LYS THR SEQRES 59 B 846 LYS ASP LEU GLN LEU PRO PRO THR SER VAL SER TYR GLN SEQRES 60 B 846 MET LYS GLN THR ASP GLY LYS CYS GLU LEU THR LEU PHE SEQRES 61 B 846 SER SER MET LEU ALA LYS ASP ILE PHE ILE GLU THR PRO SEQRES 62 B 846 LEU GLN GLY ALA ARG TYR SER ASP ASN PHE PHE ASP LEU SEQRES 63 B 846 LEU PRO GLY GLU ARG LYS LYS VAL ILE ILE THR SER PRO SEQRES 64 B 846 ARG ILE LYS LYS GLY GLU GLU LEU PRO VAL ASN ILE LYS SEQRES 65 B 846 HIS ILE ARG GLU THR TYR LYS GLU HIS HIS HIS HIS HIS SEQRES 66 B 846 HIS HET EDO A1865 4 HET NOY A1866 11 HET EDO A1867 4 HET EDO A1868 4 HET EDO A1869 4 HET EDO A1870 4 HET EDO A1871 4 HET EDO A1872 4 HET EDO A1873 4 HET EDO A1874 4 HET EDO A1875 4 HET EDO A1876 4 HET EDO A1877 4 HET EDO A1878 4 HET EDO A1879 4 HET EDO A1880 4 HET EDO A1881 4 HET EDO A1882 4 HET EDO A1883 4 HET BR A1884 1 HET BR A1885 1 HET BR A1886 1 HET EDO A1887 4 HET CL A1888 1 HET EDO A1889 4 HET BR A1891 1 HET CL A1892 1 HET CL A1893 1 HET EDO A1894 4 HET BR A1895 1 HET BR A1896 1 HET BR A1897 1 HET CL A1898 1 HET EDO A1899 4 HET EDO A1900 4 HET EDO A1901 4 HET EDO A1902 4 HET EDO A1903 4 HET EDO A1904 4 HET EDO B1868 4 HET NOY B1869 11 HET EDO B1870 4 HET EDO B1872 4 HET EDO B1873 4 HET EDO B1874 4 HET EDO B1875 4 HET EDO B1876 4 HET EDO B1877 4 HET EDO B1878 4 HET EDO B1879 4 HET EDO B1880 4 HET EDO B1881 4 HET EDO B1882 4 HET EDO B1883 4 HET EDO B1884 4 HET EDO B1885 4 HET EDO B1886 4 HET EDO B1887 4 HET BR B1888 1 HET BR B1889 1 HET CL B1890 1 HET CL B1891 1 HET CL B1892 1 HET BR B1893 1 HET EDO B1894 4 HET BR B1896 1 HET CL B1897 1 HET EDO B1898 4 HET BR B1899 1 HET EDO B1900 4 HET EDO B1901 4 HET EDO B1902 4 HET EDO B1903 4 HET EDO B1904 4 HET EDO B1905 4 HET EDO B1906 4 HET EDO B1907 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM NOY (2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL HETNAM BR BROMIDE ION HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 55(C2 H6 O2) FORMUL 4 NOY 2(C6 H13 N O4) FORMUL 22 BR 12(BR 1-) FORMUL 26 CL 8(CL 1-) FORMUL 80 HOH *1230(H2 O) HELIX 1 1 THR A 58 SER A 65 1 8 HELIX 2 2 GLU A 78 GLU A 87 5 10 HELIX 3 3 SER A 98 ASN A 103 1 6 HELIX 4 4 LYS A 142 LEU A 145 5 4 HELIX 5 5 SER A 158 GLY A 171 1 14 HELIX 6 6 HIS A 184 SER A 189 5 6 HELIX 7 7 ALA A 192 GLY A 197 5 6 HELIX 8 8 LEU A 368 VAL A 372 5 5 HELIX 9 9 THR A 373 ALA A 387 1 15 HELIX 10 10 ASN A 402 GLY A 413 1 12 HELIX 11 11 ASP A 430 ARG A 449 1 20 HELIX 12 12 GLU A 462 TRP A 470 1 9 HELIX 13 13 GLY A 471 LYS A 475 5 5 HELIX 14 14 THR A 477 ARG A 493 1 17 HELIX 15 15 GLU A 494 ASP A 504 1 11 HELIX 16 16 PRO A 522 TRP A 525 5 4 HELIX 17 17 GLU A 543 ASP A 548 1 6 HELIX 18 18 GLU A 563 ALA A 571 1 9 HELIX 19 19 ALA A 572 TYR A 576 5 5 HELIX 20 20 GLY A 592 TYR A 604 1 13 HELIX 21 21 SER A 609 ASN A 635 1 27 HELIX 22 22 LYS A 666 ALA A 677 1 12 HELIX 23 23 THR A 748 ARG A 753 1 6 HELIX 24 24 LYS A 778 LEU A 782 5 5 HELIX 25 25 HIS A 858 TYR A 863 5 6 HELIX 26 26 THR B 58 HIS B 66 1 9 HELIX 27 27 MET B 76 ILE B 81 1 6 HELIX 28 28 GLN B 82 GLU B 87 5 6 HELIX 29 29 SER B 98 ASN B 103 1 6 HELIX 30 30 LYS B 142 LEU B 145 5 4 HELIX 31 31 SER B 158 GLY B 171 1 14 HELIX 32 32 LEU B 185 SER B 189 5 5 HELIX 33 33 ALA B 192 GLY B 197 5 6 HELIX 34 34 LEU B 368 VAL B 372 5 5 HELIX 35 35 THR B 373 ALA B 387 1 15 HELIX 36 36 ASN B 402 GLY B 413 1 12 HELIX 37 37 ASP B 430 ARG B 449 1 20 HELIX 38 38 GLU B 462 TRP B 470 1 9 HELIX 39 39 GLY B 471 LYS B 475 5 5 HELIX 40 40 THR B 477 ARG B 493 1 17 HELIX 41 41 GLU B 494 ASP B 504 1 11 HELIX 42 42 ARG B 521 TRP B 525 5 5 HELIX 43 43 GLU B 543 ASP B 548 1 6 HELIX 44 44 GLU B 563 ALA B 571 1 9 HELIX 45 45 ALA B 572 TYR B 576 5 5 HELIX 46 46 SER B 580 ALA B 585 1 6 HELIX 47 47 GLY B 592 TYR B 604 1 13 HELIX 48 48 SER B 609 ASN B 635 1 27 HELIX 49 49 LYS B 666 PHE B 676 1 11 HELIX 50 50 THR B 748 ARG B 753 1 6 HELIX 51 51 LYS B 778 LEU B 782 5 5 HELIX 52 52 HIS B 858 TYR B 863 5 6 SHEET 1 AA 4 GLU A 32 LEU A 35 0 SHEET 2 AA 4 VAL A 213 TYR A 218 -1 O LEU A 215 N MET A 34 SHEET 3 AA 4 GLY A 106 PHE A 111 -1 O GLY A 106 N TYR A 218 SHEET 4 AA 4 TYR A 137 PRO A 140 -1 O TYR A 137 N PHE A 111 SHEET 1 AB 6 MET A 51 PRO A 52 0 SHEET 2 AB 6 GLU A 41 GLN A 44 -1 O PHE A 42 N MET A 51 SHEET 3 AB 6 TRP A 89 VAL A 97 -1 O GLU A 90 N SER A 43 SHEET 4 AB 6 GLY A 148 HIS A 157 -1 O GLY A 148 N VAL A 97 SHEET 5 AB 6 TYR A 117 LEU A 122 -1 O TYR A 117 N HIS A 157 SHEET 6 AB 6 SER A 125 ASP A 131 -1 O SER A 125 N LEU A 122 SHEET 1 AC 2 LEU A 114 ASP A 115 0 SHEET 2 AC 2 GLY A 208 VAL A 209 -1 O GLY A 208 N ASP A 115 SHEET 1 AD 3 ALA A 221 LEU A 233 0 SHEET 2 AD 3 ASN A 237 GLN A 248 -1 O ARG A 239 N LEU A 231 SHEET 3 AD 3 GLY A 281 THR A 292 -1 O GLY A 281 N GLN A 248 SHEET 1 AE 4 THR A 267 LEU A 278 0 SHEET 2 AE 4 ILE A 254 LEU A 264 -1 O ILE A 254 N LEU A 278 SHEET 3 AE 4 TYR A 308 ALA A 315 -1 O ASP A 309 N SER A 263 SHEET 4 AE 4 ILE A 320 ILE A 328 -1 N VAL A 321 O ILE A 314 SHEET 1 AF 3 ILE A 333 VAL A 336 0 SHEET 2 AF 3 TYR A 347 VAL A 350 -1 O TYR A 347 N VAL A 336 SHEET 3 AF 3 ILE A 353 MET A 355 -1 O ILE A 353 N VAL A 350 SHEET 1 AG 2 LYS A 339 ASP A 340 0 SHEET 2 AG 2 GLY A 343 GLU A 344 -1 O GLY A 343 N ASP A 340 SHEET 1 AH 6 PHE A 508 VAL A 510 0 SHEET 2 AH 6 LEU A 454 CYS A 458 1 O ALA A 455 N PHE A 508 SHEET 3 AH 6 LEU A 415 ASP A 419 1 O VAL A 416 N ALA A 455 SHEET 4 AH 6 MET A 391 ILE A 394 1 O VAL A 392 N TRP A 417 SHEET 5 AH 6 ALA A 357 TYR A 362 1 O ALA A 360 N ARG A 393 SHEET 6 AH 6 GLY A 641 TYR A 644 1 O THR A 642 N GLY A 359 SHEET 1 AI 2 ASP A 529 HIS A 531 0 SHEET 2 AI 2 PHE A 552 GLU A 555 1 O PHE A 552 N SER A 530 SHEET 1 AJ 3 VAL A 679 GLN A 686 0 SHEET 2 AJ 3 SER A 689 SER A 696 -1 O SER A 689 N GLN A 686 SHEET 3 AJ 3 THR A 734 LYS A 742 -1 O THR A 734 N SER A 696 SHEET 1 AK 4 THR A 718 VAL A 730 0 SHEET 2 AK 4 MET A 702 ASP A 713 -1 O MET A 702 N VAL A 730 SHEET 3 AK 4 SER A 755 LYS A 762 -1 O PHE A 756 N VAL A 712 SHEET 4 AK 4 GLN A 768 PHE A 775 -1 N VAL A 769 O LEU A 761 SHEET 1 AL 4 SER A 790 THR A 796 0 SHEET 2 AL 4 LYS A 799 PHE A 805 -1 O LYS A 799 N THR A 796 SHEET 3 AL 4 LYS A 837 THR A 842 -1 O LYS A 837 N LEU A 804 SHEET 4 AL 4 ARG A 823 TYR A 824 -1 O ARG A 823 N THR A 842 SHEET 1 AM 3 PHE A 829 LEU A 831 0 SHEET 2 AM 3 ALA A 810 GLU A 816 -1 O ALA A 810 N LEU A 831 SHEET 3 AM 3 ASN A 855 LYS A 857 -1 O ASN A 855 N GLU A 816 SHEET 1 BA 4 GLU B 32 LEU B 35 0 SHEET 2 BA 4 VAL B 213 TYR B 218 -1 O LEU B 215 N MET B 34 SHEET 3 BA 4 GLY B 106 PHE B 111 -1 O GLY B 106 N TYR B 218 SHEET 4 BA 4 TYR B 137 PRO B 140 -1 O TYR B 137 N PHE B 111 SHEET 1 BB 6 MET B 51 PRO B 52 0 SHEET 2 BB 6 GLU B 41 GLN B 44 -1 O PHE B 42 N MET B 51 SHEET 3 BB 6 TRP B 89 VAL B 97 -1 O GLU B 90 N SER B 43 SHEET 4 BB 6 GLY B 148 PHE B 156 -1 O GLY B 148 N VAL B 97 SHEET 5 BB 6 TYR B 117 LEU B 122 -1 O ASP B 119 N TYR B 155 SHEET 6 BB 6 SER B 125 ASP B 131 -1 O SER B 125 N LEU B 122 SHEET 1 BC 2 LEU B 114 ASP B 115 0 SHEET 2 BC 2 GLY B 208 VAL B 209 -1 O GLY B 208 N ASP B 115 SHEET 1 BD 3 ALA B 221 LEU B 233 0 SHEET 2 BD 3 ASN B 237 GLN B 248 -1 O ARG B 239 N LEU B 231 SHEET 3 BD 3 GLY B 281 THR B 292 -1 O GLY B 281 N GLN B 248 SHEET 1 BE 4 THR B 267 LEU B 278 0 SHEET 2 BE 4 ILE B 254 LEU B 264 -1 O ILE B 254 N LEU B 278 SHEET 3 BE 4 TYR B 308 CYS B 316 -1 O ASP B 309 N SER B 263 SHEET 4 BE 4 ARG B 319 ILE B 328 -1 O ARG B 319 N CYS B 316 SHEET 1 BF 3 ILE B 333 VAL B 336 0 SHEET 2 BF 3 TYR B 347 VAL B 350 -1 O TYR B 347 N VAL B 336 SHEET 3 BF 3 ILE B 353 MET B 355 -1 O ILE B 353 N VAL B 350 SHEET 1 BG 2 LYS B 339 ASP B 340 0 SHEET 2 BG 2 GLY B 343 GLU B 344 -1 O GLY B 343 N ASP B 340 SHEET 1 BH 6 PHE B 508 VAL B 510 0 SHEET 2 BH 6 LEU B 454 CYS B 458 1 O ALA B 455 N PHE B 508 SHEET 3 BH 6 LEU B 415 ASP B 419 1 O VAL B 416 N ALA B 455 SHEET 4 BH 6 MET B 391 ILE B 394 1 O VAL B 392 N TRP B 417 SHEET 5 BH 6 ALA B 357 TYR B 362 1 O ALA B 360 N ARG B 393 SHEET 6 BH 6 GLY B 641 TYR B 644 1 O THR B 642 N GLY B 359 SHEET 1 BI 2 SER B 530 HIS B 531 0 SHEET 2 BI 2 MET B 553 GLU B 555 1 N SER B 554 O SER B 530 SHEET 1 BJ 3 VAL B 679 GLN B 686 0 SHEET 2 BJ 3 SER B 689 SER B 696 -1 O SER B 689 N GLN B 686 SHEET 3 BJ 3 THR B 734 LYS B 742 -1 O THR B 734 N SER B 696 SHEET 1 BK 4 THR B 718 VAL B 730 0 SHEET 2 BK 4 MET B 702 ASP B 713 -1 O MET B 702 N VAL B 730 SHEET 3 BK 4 SER B 755 LYS B 762 -1 O PHE B 756 N VAL B 712 SHEET 4 BK 4 GLN B 768 PHE B 775 -1 N VAL B 769 O LEU B 761 SHEET 1 BL 4 SER B 790 THR B 796 0 SHEET 2 BL 4 LYS B 799 PHE B 805 -1 O LYS B 799 N THR B 796 SHEET 3 BL 4 LYS B 837 THR B 842 -1 O LYS B 837 N LEU B 804 SHEET 4 BL 4 ARG B 823 TYR B 824 -1 O ARG B 823 N THR B 842 SHEET 1 BM 3 PHE B 829 LEU B 831 0 SHEET 2 BM 3 ALA B 810 GLU B 816 -1 O ALA B 810 N LEU B 831 SHEET 3 BM 3 ASN B 855 LYS B 857 -1 O ASN B 855 N GLU B 816 CISPEP 1 VAL A 55 PRO A 56 0 -0.78 CISPEP 2 ASP A 115 THR A 116 0 -3.60 CISPEP 3 SER A 513 PRO A 514 0 -4.99 CISPEP 4 ASN A 584 ALA A 585 0 -6.95 CISPEP 5 ASN A 584 ALA A 585 0 13.97 CISPEP 6 ARG A 636 PRO A 637 0 7.00 CISPEP 7 ALA A 645 GLN A 646 0 8.22 CISPEP 8 VAL B 55 PRO B 56 0 2.00 CISPEP 9 ASP B 115 THR B 116 0 -3.56 CISPEP 10 SER B 513 PRO B 514 0 -0.19 CISPEP 11 ARG B 636 PRO B 637 0 8.33 CISPEP 12 ALA B 645 GLN B 646 0 1.15 SITE 1 AC1 3 ARG A 636 MET A 640 HOH A2577 SITE 1 AC2 7 HIS B 326 ARG B 327 ASN B 450 HIS B 451 SITE 2 AC2 7 HOH B2257 HOH B2323 HOH B2349 SITE 1 AC3 12 TRP A 198 ASP A 199 TRP A 200 TRP A 395 SITE 2 AC3 12 ASN A 461 GLU A 462 TRP A 533 TYR A 537 SITE 3 AC3 12 GLU A 555 TRP A 656 HOH A2470 HOH A2578 SITE 1 AC4 4 ASN A 293 PRO A 294 GLY B 266 THR B 267 SITE 1 AC5 12 TRP B 198 ASP B 199 TRP B 200 TRP B 395 SITE 2 AC5 12 ASN B 461 GLU B 462 TRP B 533 TYR B 537 SITE 3 AC5 12 GLU B 555 TRP B 656 CL B1892 HOH B2485 SITE 1 AC6 3 ASN B 261 SER B 311 HOH B2601 SITE 1 AC7 5 GLN A 365 ASN A 648 ASP A 649 ILE A 659 SITE 2 AC7 5 ASP A 660 SITE 1 AC8 7 TRP B 525 SER B 530 ASN B 532 ASP B 548 SITE 2 AC8 7 PRO B 550 MET B 553 HOH B2604 SITE 1 AC9 8 TRP A 525 SER A 530 ASN A 532 ASP A 548 SITE 2 AC9 8 LEU A 549 PRO A 550 MET A 553 HOH A2580 SITE 1 BC1 8 ILE A 328 GLY A 329 ARG A 449 ASN A 450 SITE 2 BC1 8 HIS A 451 ALA A 452 ARG A 507 HOH A2186 SITE 1 BC2 7 GLN A 230 ARG A 331 ASP A 506 ARG A 507 SITE 2 BC2 7 HOH A2268 HOH A2581 HOH A2582 SITE 1 BC3 6 GLU A 465 LYS A 468 TYR A 469 PRO A 514 SITE 2 BC3 6 LEU A 516 ALA A 517 SITE 1 BC4 4 ILE A 578 PRO A 607 PHE A 613 HOH A2583 SITE 1 BC5 5 ASN A 337 HIS A 511 TYR A 515 HOH A2584 SITE 2 BC5 5 HOH A2585 SITE 1 BC6 5 ASN B 337 HIS B 511 TYR B 515 HOH B2605 SITE 2 BC6 5 HOH B2606 SITE 1 BC7 7 HIS A 157 EDO A1887 ASP B 88 HIS B 157 SITE 2 BC7 7 ARG B 161 GLN B 162 EDO B1887 SITE 1 BC8 7 GLN A 623 ARG A 626 HIS A 774 PHE A 775 SITE 2 BC8 7 HOH A2533 HOH A2586 HOH A2587 SITE 1 BC9 4 THR A 432 ARG A 436 EDO A1894 LEU B 126 SITE 1 CC1 4 TYR A 443 ARG A 446 HOH A2343 HOH A2588 SITE 1 CC2 7 SER B 43 GLN B 44 SER B 45 GLY B 46 SITE 2 CC2 7 THR B 47 GLU B 48 GLU B 90 SITE 1 CC3 10 TYR A 117 ALA A 118 ASP A 119 LYS A 129 SITE 2 CC3 10 ALA A 130 HIS A 157 EDO A1894 EDO A1901 SITE 3 CC3 10 HOH A2590 LYS B 129 SITE 1 CC4 4 SER A 825 ILE A 840 THR A 842 HOH A2307 SITE 1 CC5 6 ARG B 331 ASP B 506 ARG B 507 HOH B2390 SITE 2 CC5 6 HOH B2607 HOH B2608 SITE 1 CC6 6 SER A 43 GLN A 44 GLY A 46 THR A 47 SITE 2 CC6 6 GLU A 48 GLU A 90 SITE 1 CC7 5 GLN B 365 ASN B 648 ASP B 649 ILE B 659 SITE 2 CC7 5 ASP B 660 SITE 1 CC8 6 GLU B 465 LYS B 468 TYR B 469 PRO B 514 SITE 2 CC8 6 LEU B 516 ALA B 517 SITE 1 CC9 6 ARG B 626 HIS B 774 PHE B 775 HOH B2609 SITE 2 CC9 6 HOH B2610 HOH B2611 SITE 1 DC1 8 PHE B 356 ARG B 633 ARG B 636 ILE B 695 SITE 2 DC1 8 SER B 696 ASP B 697 ASN B 733 THR B 734 SITE 1 DC2 5 ARG A 674 SER A 772 VAL A 773 HOH A2591 SITE 2 DC2 5 HOH A2592 SITE 1 DC3 5 ASP A 603 TYR A 604 GLN A 623 LYS A 778 SITE 2 DC3 5 THR A 779 SITE 1 DC4 8 ILE B 328 GLY B 329 ARG B 449 ASN B 450 SITE 2 DC4 8 HIS B 451 ALA B 452 ARG B 507 HOH B2186 SITE 1 DC5 7 SER A 43 GLN A 44 THR A 47 LYS A 49 SITE 2 DC5 7 MET A 51 LEU A 68 HOH A2594 SITE 1 DC6 7 HIS B 774 PHE B 775 PHE B 776 ARG B 777 SITE 2 DC6 7 LYS B 778 CL B1890 HOH B2612 SITE 1 DC7 6 PHE B 42 SER B 43 GLN B 44 LYS B 49 SITE 2 DC7 6 HOH B2016 HOH B2613 SITE 1 DC8 5 PRO B 212 HOH B2070 HOH B2167 HOH B2319 SITE 2 DC8 5 HOH B2620 SITE 1 DC9 5 ARG B 823 SER B 825 ILE B 840 THR B 842 SITE 2 DC9 5 HOH B2306 SITE 1 EC1 7 ASP A 119 TYR A 121 TYR A 155 ARG B 161 SITE 2 EC1 7 GLN B 162 PRO B 165 EDO B1874 SITE 1 EC2 5 VAL A 372 THR A 374 TYR A 377 ASN A 402 SITE 2 EC2 5 HOH A2595 SITE 1 EC3 2 ILE A 107 LYS A 142 SITE 1 EC4 2 ILE B 107 LYS B 142 SITE 1 EC5 1 HIS A 284 SITE 1 EC6 2 GLN B 685 ASP B 688 SITE 1 EC7 5 ASP A 88 HIS A 157 ARG A 161 HOH A2596 SITE 2 EC7 5 EDO B1874 SITE 1 EC8 5 ILE B 684 GLN B 685 HIS B 774 EDO B1883 SITE 2 EC8 5 HOH B2503 SITE 1 EC9 4 HIS A 627 ILE A 684 GLN A 685 HOH A2487 SITE 1 FC1 5 TRP A 519 TYR A 537 HOH A2355 HOH A2597 SITE 2 FC1 5 HOH A2601 SITE 1 FC2 9 PRO A 72 PHE A 73 TYR A 74 GLY A 75 SITE 2 FC2 9 MET A 76 GLU A 78 ALA A 585 HIS A 586 SITE 3 FC2 9 TRP A 651 SITE 1 FC3 3 ASN A 402 HOH A2056 HOH A2070 SITE 1 FC4 2 ASN A 300 ASN A 390 SITE 1 FC5 2 PHE A 476 THR A 477 SITE 1 FC6 2 HOH B2561 HOH B2562 SITE 1 FC7 5 TRP B 200 ILE B 363 TRP B 395 NOY B1869 SITE 2 FC7 5 HOH B2425 SITE 1 FC8 3 PHE B 476 THR B 477 VAL B 480 SITE 1 FC9 3 GLN B 274 ILE B 285 THR B 286 SITE 1 GC1 3 MET B 298 TRP B 302 ASN B 351 SITE 1 GC2 9 TYR A 117 ASP A 131 GLN A 162 ARG A 436 SITE 2 GC2 9 EDO A1877 HOH A2598 LEU B 126 LYS B 129 SITE 3 GC2 9 EDO B1875 SITE 1 GC3 1 GLN B 108 SITE 1 GC4 1 GLN A 108 SITE 1 GC5 1 ARG B 698 SITE 1 GC6 8 VAL B 372 THR B 374 TYR B 377 ASN B 402 SITE 2 GC6 8 LEU B 404 HOH B2618 HOH B2619 HOH B2620 SITE 1 GC7 2 GLN A 685 ASP A 688 SITE 1 GC8 2 ASN A 337 LYS A 339 SITE 1 GC9 7 ASN B 300 TRP B 302 PHE B 356 ASN B 390 SITE 2 GC9 7 ASP B 697 HOH B2281 HOH B2621 SITE 1 HC1 4 ASN B 337 GLU B 338 GLU B 344 HOH B2606 SITE 1 HC2 5 PHE B 542 GLU B 543 ASP B 603 GLY B 624 SITE 2 HC2 5 HOH B2461 SITE 1 HC3 4 HIS A 326 HIS A 451 HOH A2264 HOH A2351 SITE 1 HC4 7 LYS A 540 ASP A 548 HOH A2599 HOH A2600 SITE 2 HC4 7 ASP B 340 LYS B 341 HOH B2268 SITE 1 HC5 6 VAL B 442 TYR B 443 ARG B 446 HOH B2622 SITE 2 HC5 6 HOH B2623 HOH B2624 SITE 1 HC6 5 TYR A 469 ASN A 518 TRP A 519 GLY A 520 SITE 2 HC6 5 HOH A2601 SITE 1 HC7 9 LYS A 129 HIS A 157 GLN A 162 EDO A1877 SITE 2 HC7 9 HOH A2602 ASP B 119 LYS B 129 HIS B 157 SITE 3 HC7 9 GLN B 162 SITE 1 HC8 6 ARG B 597 PRO B 607 GLU B 608 PHE B 610 SITE 2 HC8 6 PHE B 613 HOH B2625 SITE 1 HC9 4 PRO A 786 THR A 787 HIS A 858 ARG A 860 SITE 1 IC1 3 HOH B2267 HOH B2626 HOH B2628 SITE 1 IC2 3 TYR B 661 TYR B 662 HOH B2617 SITE 1 IC3 4 HOH A2579 TRP B 519 TRP B 533 HOH B2603 CRYST1 91.100 115.100 99.500 90.00 113.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010977 0.000000 0.004750 0.00000 SCALE2 0.000000 0.008688 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010951 0.00000