data_2VSV # _entry.id 2VSV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VSV pdb_00002vsv 10.2210/pdb2vsv/pdb PDBE EBI-36070 ? ? WWPDB D_1290036070 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VSV _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-04-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pike, A.C.W.' 1 'Kochan, G.' 2 'Sun, Z.' 3 'Shafqat, N.' 4 'Pilka, E.S.' 5 'Roos, A.' 6 'Elkins, J.' 7 'Burgess-Brown, N.' 8 'Murray, J.W.' 9 'von Delft, F.' 10 'Wikstrom, M.' 11 'Edwards, A.' 12 'Arrowsmith, C.H.' 13 'Bountra, C.' 14 'Oppermann, U.' 15 # _citation.id primary _citation.title 'Crystal Structure of the Pdz Domain of Human Rhophilin-2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pike, A.C.W.' 1 ? primary 'Kochan, G.' 2 ? primary 'Sun, Z.' 3 ? primary 'Shafqat, N.' 4 ? primary 'Pilka, E.S.' 5 ? primary 'Roos, A.' 6 ? primary 'Elkins, J.' 7 ? primary 'Burgess-Brown, N.' 8 ? primary 'Murray, J.W.' 9 ? primary 'von Delft, F.' 10 ? primary 'Wikstrom, M.' 11 ? primary 'Edwards, A.' 12 ? primary 'Arrowsmith, C.H.' 13 ? primary 'Bountra, C.' 14 ? primary 'Oppermann, U.' 15 ? # _cell.entry_id 2VSV _cell.length_a 78.250 _cell.length_b 39.890 _cell.length_c 73.480 _cell.angle_alpha 90.00 _cell.angle_beta 115.78 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VSV _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man RHOPHILIN-2 12281.888 2 ? ? 'PDZ DOMAIN, RESIDUES 514-595' ? 2 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GTP-RHO-BINDING PROTEIN 2,76 KDA RHOB EFFECTOR PROTEIN, P76RBE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMPRSIRFTAEEGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLT LSEVMKLLKSFGEDEIEMKVVSLLDEVTF ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMPRSIRFTAEEGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLT LSEVMKLLKSFGEDEIEMKVVSLLDEVTF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 PRO n 1 25 ARG n 1 26 SER n 1 27 ILE n 1 28 ARG n 1 29 PHE n 1 30 THR n 1 31 ALA n 1 32 GLU n 1 33 GLU n 1 34 GLY n 1 35 ASP n 1 36 LEU n 1 37 GLY n 1 38 PHE n 1 39 THR n 1 40 LEU n 1 41 ARG n 1 42 GLY n 1 43 ASN n 1 44 ALA n 1 45 PRO n 1 46 VAL n 1 47 GLN n 1 48 VAL n 1 49 HIS n 1 50 PHE n 1 51 LEU n 1 52 ASP n 1 53 PRO n 1 54 TYR n 1 55 CYS n 1 56 SER n 1 57 ALA n 1 58 SER n 1 59 VAL n 1 60 ALA n 1 61 GLY n 1 62 ALA n 1 63 ARG n 1 64 GLU n 1 65 GLY n 1 66 ASP n 1 67 TYR n 1 68 ILE n 1 69 VAL n 1 70 SER n 1 71 ILE n 1 72 GLN n 1 73 LEU n 1 74 VAL n 1 75 ASP n 1 76 CYS n 1 77 LYS n 1 78 TRP n 1 79 LEU n 1 80 THR n 1 81 LEU n 1 82 SER n 1 83 GLU n 1 84 VAL n 1 85 MET n 1 86 LYS n 1 87 LEU n 1 88 LEU n 1 89 LYS n 1 90 SER n 1 91 PHE n 1 92 GLY n 1 93 GLU n 1 94 ASP n 1 95 GLU n 1 96 ILE n 1 97 GLU n 1 98 MET n 1 99 LYS n 1 100 VAL n 1 101 VAL n 1 102 SER n 1 103 LEU n 1 104 LEU n 1 105 ASP n 1 106 GLU n 1 107 VAL n 1 108 THR n 1 109 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant R3-PRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2VSV 1 ? ? 2VSV ? 2 UNP RHPN2_HUMAN 1 ? ? Q8IUC4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VSV A 1 ? 23 ? 2VSV -22 ? 0 ? -22 0 2 2 2VSV A 24 ? 105 ? Q8IUC4 514 ? 595 ? 514 595 3 1 2VSV A 106 ? 109 ? 2VSV 596 ? 599 ? 596 599 4 1 2VSV B 1 ? 23 ? 2VSV -22 ? 0 ? -22 0 5 2 2VSV B 24 ? 105 ? Q8IUC4 514 ? 595 ? 514 595 6 1 2VSV B 106 ? 109 ? 2VSV 596 ? 599 ? 596 599 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VSV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 42 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2M SODIUM ACETATE, 20% PEG3350; 10% ETHYLENE GLYCOL, pH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-03-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99186 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.99186 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VSV _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.90 _reflns.d_resolution_high 1.82 _reflns.number_obs 18177 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.80 _reflns.B_iso_Wilson_estimate 10.28 _reflns.pdbx_redundancy 3.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.82 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.33 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.20 _reflns_shell.pdbx_redundancy 3.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VSV _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17238 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 66.23 _refine.ls_d_res_high 1.82 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.220 _refine.ls_R_factor_R_free 0.267 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 939 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.915 _refine.correlation_coeff_Fo_to_Fc_free 0.895 _refine.B_iso_mean 12.21 _refine.aniso_B[1][1] 2.36000 _refine.aniso_B[2][2] -0.39000 _refine.aniso_B[3][3] -1.34000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.72000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRIES 2F5Y,2OCS,2V90' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.160 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.114 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.645 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1538 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1631 _refine_hist.d_res_high 1.82 _refine_hist.d_res_low 66.23 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 1577 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 1039 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.376 1.960 ? 2133 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.902 3.000 ? 2549 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.118 5.000 ? 199 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 23.622 24.308 ? 65 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.525 15.000 ? 270 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.991 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 245 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1744 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 312 'X-RAY DIFFRACTION' ? r_nbd_refined 0.217 0.200 ? 303 'X-RAY DIFFRACTION' ? r_nbd_other 0.190 0.200 ? 1021 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.182 0.200 ? 753 'X-RAY DIFFRACTION' ? r_nbtor_other 0.087 0.200 ? 813 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.163 0.200 ? 109 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.126 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.202 0.200 ? 38 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.129 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.811 3.000 ? 995 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 4.101 5.000 ? 1598 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 6.724 8.000 ? 582 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 9.236 11.000 ? 535 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 530 0.03 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 530 0.03 0.05 'tight positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 622 0.03 0.50 'medium positional' 1 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 622 0.03 0.50 'medium positional' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 530 0.23 0.50 'tight thermal' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 530 0.23 0.50 'tight thermal' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 622 0.14 2.00 'medium thermal' 1 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 622 0.14 2.00 'medium thermal' 1 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.82 _refine_ls_shell.d_res_low 1.87 _refine_ls_shell.number_reflns_R_work 1223 _refine_ls_shell.R_factor_R_work 0.2560 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3490 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.625000 _struct_ncs_oper.matrix[1][2] 0.000000 _struct_ncs_oper.matrix[1][3] 0.781000 _struct_ncs_oper.matrix[2][1] 0.002000 _struct_ncs_oper.matrix[2][2] -1.000000 _struct_ncs_oper.matrix[2][3] -0.002000 _struct_ncs_oper.matrix[3][1] 0.781000 _struct_ncs_oper.matrix[3][2] 0.002000 _struct_ncs_oper.matrix[3][3] -0.625000 _struct_ncs_oper.vector[1] -8.54858 _struct_ncs_oper.vector[2] 40.82570 _struct_ncs_oper.vector[3] 17.81877 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 A 499 A 520 1 2 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 499 B 520 1 2 ? ? ? ? ? ? ? ? 1 ? ? ? 1 A 526 A 593 2 2 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 526 B 593 2 2 ? ? ? ? ? ? ? ? 1 ? ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2VSV _struct.title 'Crystal structure of the PDZ domain of human rhophilin-2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VSV _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'SCAFFOLD PROTEIN, RHO GTPASE BINDING, PROTEIN-BINDING, RHOB, NITRATION, CYTOPLASM, PDZ DOMAIN, CASP8, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 10 ? MET A 23 ? GLY A -13 MET A 0 1 ? 14 HELX_P HELX_P2 2 ALA A 31 ? ASP A 35 ? ALA A 521 ASP A 525 5 ? 5 HELX_P HELX_P3 3 CYS A 55 ? ALA A 60 ? CYS A 545 ALA A 550 1 ? 6 HELX_P HELX_P4 4 THR A 80 ? SER A 90 ? THR A 570 SER A 580 1 ? 11 HELX_P HELX_P5 5 GLY B 10 ? MET B 23 ? GLY B -13 MET B 0 1 ? 14 HELX_P HELX_P6 6 ALA B 31 ? ASP B 35 ? ALA B 521 ASP B 525 5 ? 5 HELX_P HELX_P7 7 CYS B 55 ? ALA B 60 ? CYS B 545 ALA B 550 1 ? 6 HELX_P HELX_P8 8 THR B 80 ? SER B 90 ? THR B 570 SER B 580 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 44 A . ? ALA 534 A PRO 45 A ? PRO 535 A 1 -0.27 2 ALA 44 B . ? ALA 534 B PRO 45 B ? PRO 535 B 1 0.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 2 ? BA ? 4 ? BB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 25 ? PHE A 29 ? ARG A 515 PHE A 519 AA 2 ILE A 96 ? VAL A 101 ? ILE A 586 VAL A 591 AA 3 TYR A 67 ? ILE A 71 ? TYR A 557 ILE A 561 AA 4 VAL A 74 ? ASP A 75 ? VAL A 564 ASP A 565 AB 1 PHE A 38 ? ARG A 41 ? PHE A 528 ARG A 531 AB 2 GLN A 47 ? LEU A 51 ? GLN A 537 LEU A 541 BA 1 ARG B 25 ? PHE B 29 ? ARG B 515 PHE B 519 BA 2 ILE B 96 ? VAL B 101 ? ILE B 586 VAL B 591 BA 3 TYR B 67 ? ILE B 71 ? TYR B 557 ILE B 561 BA 4 VAL B 74 ? ASP B 75 ? VAL B 564 ASP B 565 BB 1 PHE B 38 ? ARG B 41 ? PHE B 528 ARG B 531 BB 2 GLN B 47 ? LEU B 51 ? GLN B 537 LEU B 541 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 29 ? N PHE A 519 O ILE A 96 ? O ILE A 586 AA 2 3 N VAL A 101 ? N VAL A 591 O TYR A 67 ? O TYR A 557 AA 3 4 N ILE A 71 ? N ILE A 561 O VAL A 74 ? O VAL A 564 AB 1 2 N ARG A 41 ? N ARG A 531 O GLN A 47 ? O GLN A 537 BA 1 2 N PHE B 29 ? N PHE B 519 O ILE B 96 ? O ILE B 586 BA 2 3 N VAL B 101 ? N VAL B 591 O TYR B 67 ? O TYR B 557 BA 3 4 N ILE B 71 ? N ILE B 561 O VAL B 74 ? O VAL B 564 BB 1 2 N ARG B 41 ? N ARG B 531 O GLN B 47 ? O GLN B 537 # _database_PDB_matrix.entry_id 2VSV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VSV _atom_sites.fract_transf_matrix[1][1] 0.012780 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006172 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025069 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015113 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -22 ? ? ? A . n A 1 2 HIS 2 -21 ? ? ? A . n A 1 3 HIS 3 -20 ? ? ? A . n A 1 4 HIS 4 -19 ? ? ? A . n A 1 5 HIS 5 -18 ? ? ? A . n A 1 6 HIS 6 -17 ? ? ? A . n A 1 7 HIS 7 -16 ? ? ? A . n A 1 8 SER 8 -15 -15 SER SER A . n A 1 9 SER 9 -14 -14 SER SER A . n A 1 10 GLY 10 -13 -13 GLY GLY A . n A 1 11 VAL 11 -12 -12 VAL VAL A . n A 1 12 ASP 12 -11 -11 ASP ASP A . n A 1 13 LEU 13 -10 -10 LEU LEU A . n A 1 14 GLY 14 -9 -9 GLY GLY A . n A 1 15 THR 15 -8 -8 THR THR A . n A 1 16 GLU 16 -7 -7 GLU GLU A . n A 1 17 ASN 17 -6 -6 ASN ASN A . n A 1 18 LEU 18 -5 -5 LEU LEU A . n A 1 19 TYR 19 -4 -4 TYR TYR A . n A 1 20 PHE 20 -3 -3 PHE PHE A . n A 1 21 GLN 21 -2 -2 GLN GLN A . n A 1 22 SER 22 -1 -1 SER SER A . n A 1 23 MET 23 0 0 MET MET A . n A 1 24 PRO 24 514 514 PRO PRO A . n A 1 25 ARG 25 515 515 ARG ARG A . n A 1 26 SER 26 516 516 SER SER A . n A 1 27 ILE 27 517 517 ILE ILE A . n A 1 28 ARG 28 518 518 ARG ARG A . n A 1 29 PHE 29 519 519 PHE PHE A . n A 1 30 THR 30 520 520 THR THR A . n A 1 31 ALA 31 521 521 ALA ALA A . n A 1 32 GLU 32 522 522 GLU GLU A . n A 1 33 GLU 33 523 523 GLU GLU A . n A 1 34 GLY 34 524 524 GLY GLY A . n A 1 35 ASP 35 525 525 ASP ASP A . n A 1 36 LEU 36 526 526 LEU LEU A . n A 1 37 GLY 37 527 527 GLY GLY A . n A 1 38 PHE 38 528 528 PHE PHE A . n A 1 39 THR 39 529 529 THR THR A . n A 1 40 LEU 40 530 530 LEU LEU A . n A 1 41 ARG 41 531 531 ARG ARG A . n A 1 42 GLY 42 532 532 GLY GLY A . n A 1 43 ASN 43 533 533 ASN ASN A . n A 1 44 ALA 44 534 534 ALA ALA A . n A 1 45 PRO 45 535 535 PRO PRO A . n A 1 46 VAL 46 536 536 VAL VAL A . n A 1 47 GLN 47 537 537 GLN GLN A . n A 1 48 VAL 48 538 538 VAL VAL A . n A 1 49 HIS 49 539 539 HIS HIS A . n A 1 50 PHE 50 540 540 PHE PHE A . n A 1 51 LEU 51 541 541 LEU LEU A . n A 1 52 ASP 52 542 542 ASP ASP A . n A 1 53 PRO 53 543 543 PRO PRO A . n A 1 54 TYR 54 544 544 TYR TYR A . n A 1 55 CYS 55 545 545 CYS CYS A . n A 1 56 SER 56 546 546 SER SER A . n A 1 57 ALA 57 547 547 ALA ALA A . n A 1 58 SER 58 548 548 SER SER A . n A 1 59 VAL 59 549 549 VAL VAL A . n A 1 60 ALA 60 550 550 ALA ALA A . n A 1 61 GLY 61 551 551 GLY GLY A . n A 1 62 ALA 62 552 552 ALA ALA A . n A 1 63 ARG 63 553 553 ARG ARG A . n A 1 64 GLU 64 554 554 GLU GLU A . n A 1 65 GLY 65 555 555 GLY GLY A . n A 1 66 ASP 66 556 556 ASP ASP A . n A 1 67 TYR 67 557 557 TYR TYR A . n A 1 68 ILE 68 558 558 ILE ILE A . n A 1 69 VAL 69 559 559 VAL VAL A . n A 1 70 SER 70 560 560 SER SER A . n A 1 71 ILE 71 561 561 ILE ILE A . n A 1 72 GLN 72 562 562 GLN GLN A . n A 1 73 LEU 73 563 563 LEU LEU A . n A 1 74 VAL 74 564 564 VAL VAL A . n A 1 75 ASP 75 565 565 ASP ASP A . n A 1 76 CYS 76 566 566 CYS CYS A . n A 1 77 LYS 77 567 567 LYS LYS A . n A 1 78 TRP 78 568 568 TRP TRP A . n A 1 79 LEU 79 569 569 LEU LEU A . n A 1 80 THR 80 570 570 THR THR A . n A 1 81 LEU 81 571 571 LEU LEU A . n A 1 82 SER 82 572 572 SER SER A . n A 1 83 GLU 83 573 573 GLU GLU A . n A 1 84 VAL 84 574 574 VAL VAL A . n A 1 85 MET 85 575 575 MET MET A . n A 1 86 LYS 86 576 576 LYS LYS A . n A 1 87 LEU 87 577 577 LEU LEU A . n A 1 88 LEU 88 578 578 LEU LEU A . n A 1 89 LYS 89 579 579 LYS LYS A . n A 1 90 SER 90 580 580 SER SER A . n A 1 91 PHE 91 581 581 PHE PHE A . n A 1 92 GLY 92 582 582 GLY GLY A . n A 1 93 GLU 93 583 583 GLU GLU A . n A 1 94 ASP 94 584 584 ASP ASP A . n A 1 95 GLU 95 585 585 GLU GLU A . n A 1 96 ILE 96 586 586 ILE ILE A . n A 1 97 GLU 97 587 587 GLU GLU A . n A 1 98 MET 98 588 588 MET MET A . n A 1 99 LYS 99 589 589 LYS LYS A . n A 1 100 VAL 100 590 590 VAL VAL A . n A 1 101 VAL 101 591 591 VAL VAL A . n A 1 102 SER 102 592 592 SER SER A . n A 1 103 LEU 103 593 593 LEU LEU A . n A 1 104 LEU 104 594 594 LEU LEU A . n A 1 105 ASP 105 595 ? ? ? A . n A 1 106 GLU 106 596 ? ? ? A . n A 1 107 VAL 107 597 ? ? ? A . n A 1 108 THR 108 598 ? ? ? A . n A 1 109 PHE 109 599 ? ? ? A . n B 1 1 MET 1 -22 -22 MET MET B . n B 1 2 HIS 2 -21 -21 HIS HIS B . n B 1 3 HIS 3 -20 -20 HIS HIS B . n B 1 4 HIS 4 -19 -19 HIS HIS B . n B 1 5 HIS 5 -18 -18 HIS HIS B . n B 1 6 HIS 6 -17 -17 HIS HIS B . n B 1 7 HIS 7 -16 -16 HIS HIS B . n B 1 8 SER 8 -15 -15 SER SER B . n B 1 9 SER 9 -14 -14 SER SER B . n B 1 10 GLY 10 -13 -13 GLY GLY B . n B 1 11 VAL 11 -12 -12 VAL VAL B . n B 1 12 ASP 12 -11 -11 ASP ASP B . n B 1 13 LEU 13 -10 -10 LEU LEU B . n B 1 14 GLY 14 -9 -9 GLY GLY B . n B 1 15 THR 15 -8 -8 THR THR B . n B 1 16 GLU 16 -7 -7 GLU GLU B . n B 1 17 ASN 17 -6 -6 ASN ASN B . n B 1 18 LEU 18 -5 -5 LEU LEU B . n B 1 19 TYR 19 -4 -4 TYR TYR B . n B 1 20 PHE 20 -3 -3 PHE PHE B . n B 1 21 GLN 21 -2 -2 GLN GLN B . n B 1 22 SER 22 -1 -1 SER SER B . n B 1 23 MET 23 0 0 MET MET B . n B 1 24 PRO 24 514 514 PRO PRO B . n B 1 25 ARG 25 515 515 ARG ARG B . n B 1 26 SER 26 516 516 SER SER B . n B 1 27 ILE 27 517 517 ILE ILE B . n B 1 28 ARG 28 518 518 ARG ARG B . n B 1 29 PHE 29 519 519 PHE PHE B . n B 1 30 THR 30 520 520 THR THR B . n B 1 31 ALA 31 521 521 ALA ALA B . n B 1 32 GLU 32 522 522 GLU GLU B . n B 1 33 GLU 33 523 523 GLU GLU B . n B 1 34 GLY 34 524 524 GLY GLY B . n B 1 35 ASP 35 525 525 ASP ASP B . n B 1 36 LEU 36 526 526 LEU LEU B . n B 1 37 GLY 37 527 527 GLY GLY B . n B 1 38 PHE 38 528 528 PHE PHE B . n B 1 39 THR 39 529 529 THR THR B . n B 1 40 LEU 40 530 530 LEU LEU B . n B 1 41 ARG 41 531 531 ARG ARG B . n B 1 42 GLY 42 532 532 GLY GLY B . n B 1 43 ASN 43 533 533 ASN ASN B . n B 1 44 ALA 44 534 534 ALA ALA B . n B 1 45 PRO 45 535 535 PRO PRO B . n B 1 46 VAL 46 536 536 VAL VAL B . n B 1 47 GLN 47 537 537 GLN GLN B . n B 1 48 VAL 48 538 538 VAL VAL B . n B 1 49 HIS 49 539 539 HIS HIS B . n B 1 50 PHE 50 540 540 PHE PHE B . n B 1 51 LEU 51 541 541 LEU LEU B . n B 1 52 ASP 52 542 542 ASP ASP B . n B 1 53 PRO 53 543 543 PRO PRO B . n B 1 54 TYR 54 544 544 TYR TYR B . n B 1 55 CYS 55 545 545 CYS CYS B . n B 1 56 SER 56 546 546 SER SER B . n B 1 57 ALA 57 547 547 ALA ALA B . n B 1 58 SER 58 548 548 SER SER B . n B 1 59 VAL 59 549 549 VAL VAL B . n B 1 60 ALA 60 550 550 ALA ALA B . n B 1 61 GLY 61 551 551 GLY GLY B . n B 1 62 ALA 62 552 552 ALA ALA B . n B 1 63 ARG 63 553 553 ARG ARG B . n B 1 64 GLU 64 554 554 GLU GLU B . n B 1 65 GLY 65 555 555 GLY GLY B . n B 1 66 ASP 66 556 556 ASP ASP B . n B 1 67 TYR 67 557 557 TYR TYR B . n B 1 68 ILE 68 558 558 ILE ILE B . n B 1 69 VAL 69 559 559 VAL VAL B . n B 1 70 SER 70 560 560 SER SER B . n B 1 71 ILE 71 561 561 ILE ILE B . n B 1 72 GLN 72 562 562 GLN GLN B . n B 1 73 LEU 73 563 563 LEU LEU B . n B 1 74 VAL 74 564 564 VAL VAL B . n B 1 75 ASP 75 565 565 ASP ASP B . n B 1 76 CYS 76 566 566 CYS CYS B . n B 1 77 LYS 77 567 567 LYS LYS B . n B 1 78 TRP 78 568 568 TRP TRP B . n B 1 79 LEU 79 569 569 LEU LEU B . n B 1 80 THR 80 570 570 THR THR B . n B 1 81 LEU 81 571 571 LEU LEU B . n B 1 82 SER 82 572 572 SER SER B . n B 1 83 GLU 83 573 573 GLU GLU B . n B 1 84 VAL 84 574 574 VAL VAL B . n B 1 85 MET 85 575 575 MET MET B . n B 1 86 LYS 86 576 576 LYS LYS B . n B 1 87 LEU 87 577 577 LEU LEU B . n B 1 88 LEU 88 578 578 LEU LEU B . n B 1 89 LYS 89 579 579 LYS LYS B . n B 1 90 SER 90 580 580 SER SER B . n B 1 91 PHE 91 581 581 PHE PHE B . n B 1 92 GLY 92 582 582 GLY GLY B . n B 1 93 GLU 93 583 583 GLU GLU B . n B 1 94 ASP 94 584 584 ASP ASP B . n B 1 95 GLU 95 585 585 GLU GLU B . n B 1 96 ILE 96 586 586 ILE ILE B . n B 1 97 GLU 97 587 587 GLU GLU B . n B 1 98 MET 98 588 588 MET MET B . n B 1 99 LYS 99 589 589 LYS LYS B . n B 1 100 VAL 100 590 590 VAL VAL B . n B 1 101 VAL 101 591 591 VAL VAL B . n B 1 102 SER 102 592 592 SER SER B . n B 1 103 LEU 103 593 593 LEU LEU B . n B 1 104 LEU 104 594 594 LEU LEU B . n B 1 105 ASP 105 595 ? ? ? B . n B 1 106 GLU 106 596 ? ? ? B . n B 1 107 VAL 107 597 ? ? ? B . n B 1 108 THR 108 598 ? ? ? B . n B 1 109 PHE 109 599 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . C 2 HOH 9 2009 2009 HOH HOH A . C 2 HOH 10 2010 2010 HOH HOH A . C 2 HOH 11 2011 2011 HOH HOH A . C 2 HOH 12 2012 2012 HOH HOH A . C 2 HOH 13 2013 2013 HOH HOH A . C 2 HOH 14 2014 2014 HOH HOH A . C 2 HOH 15 2015 2015 HOH HOH A . C 2 HOH 16 2016 2016 HOH HOH A . C 2 HOH 17 2017 2017 HOH HOH A . C 2 HOH 18 2018 2018 HOH HOH A . C 2 HOH 19 2019 2019 HOH HOH A . C 2 HOH 20 2020 2020 HOH HOH A . C 2 HOH 21 2021 2021 HOH HOH A . C 2 HOH 22 2022 2022 HOH HOH A . C 2 HOH 23 2023 2023 HOH HOH A . C 2 HOH 24 2024 2024 HOH HOH A . C 2 HOH 25 2025 2025 HOH HOH A . C 2 HOH 26 2026 2026 HOH HOH A . C 2 HOH 27 2027 2027 HOH HOH A . C 2 HOH 28 2028 2028 HOH HOH A . C 2 HOH 29 2029 2029 HOH HOH A . C 2 HOH 30 2030 2030 HOH HOH A . C 2 HOH 31 2031 2031 HOH HOH A . C 2 HOH 32 2032 2032 HOH HOH A . C 2 HOH 33 2033 2033 HOH HOH A . C 2 HOH 34 2034 2034 HOH HOH A . C 2 HOH 35 2035 2035 HOH HOH A . C 2 HOH 36 2036 2036 HOH HOH A . C 2 HOH 37 2037 2037 HOH HOH A . C 2 HOH 38 2038 2038 HOH HOH A . C 2 HOH 39 2039 2039 HOH HOH A . C 2 HOH 40 2040 2040 HOH HOH A . C 2 HOH 41 2041 2041 HOH HOH A . C 2 HOH 42 2042 2042 HOH HOH A . C 2 HOH 43 2043 2043 HOH HOH A . C 2 HOH 44 2044 2044 HOH HOH A . C 2 HOH 45 2045 2045 HOH HOH A . C 2 HOH 46 2046 2046 HOH HOH A . C 2 HOH 47 2047 2047 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . D 2 HOH 3 2003 2003 HOH HOH B . D 2 HOH 4 2004 2004 HOH HOH B . D 2 HOH 5 2005 2005 HOH HOH B . D 2 HOH 6 2006 2006 HOH HOH B . D 2 HOH 7 2007 2007 HOH HOH B . D 2 HOH 8 2008 2008 HOH HOH B . D 2 HOH 9 2009 2009 HOH HOH B . D 2 HOH 10 2010 2010 HOH HOH B . D 2 HOH 11 2011 2011 HOH HOH B . D 2 HOH 12 2012 2012 HOH HOH B . D 2 HOH 13 2013 2013 HOH HOH B . D 2 HOH 14 2014 2014 HOH HOH B . D 2 HOH 15 2015 2015 HOH HOH B . D 2 HOH 16 2016 2016 HOH HOH B . D 2 HOH 17 2017 2017 HOH HOH B . D 2 HOH 18 2018 2018 HOH HOH B . D 2 HOH 19 2019 2019 HOH HOH B . D 2 HOH 20 2020 2020 HOH HOH B . D 2 HOH 21 2021 2021 HOH HOH B . D 2 HOH 22 2022 2022 HOH HOH B . D 2 HOH 23 2023 2023 HOH HOH B . D 2 HOH 24 2024 2024 HOH HOH B . D 2 HOH 25 2025 2025 HOH HOH B . D 2 HOH 26 2026 2026 HOH HOH B . D 2 HOH 27 2027 2027 HOH HOH B . D 2 HOH 28 2028 2028 HOH HOH B . D 2 HOH 29 2029 2029 HOH HOH B . D 2 HOH 30 2030 2030 HOH HOH B . D 2 HOH 31 2031 2031 HOH HOH B . D 2 HOH 32 2032 2032 HOH HOH B . D 2 HOH 33 2033 2033 HOH HOH B . D 2 HOH 34 2034 2034 HOH HOH B . D 2 HOH 35 2035 2035 HOH HOH B . D 2 HOH 36 2036 2036 HOH HOH B . D 2 HOH 37 2037 2037 HOH HOH B . D 2 HOH 38 2038 2038 HOH HOH B . D 2 HOH 39 2039 2039 HOH HOH B . D 2 HOH 40 2040 2040 HOH HOH B . D 2 HOH 41 2041 2041 HOH HOH B . D 2 HOH 42 2042 2042 HOH HOH B . D 2 HOH 43 2043 2043 HOH HOH B . D 2 HOH 44 2044 2044 HOH HOH B . D 2 HOH 45 2045 2045 HOH HOH B . D 2 HOH 46 2046 2046 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PQS dimeric 2 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1 A,C 3 1 B,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1230 ? 1 MORE -22.3 ? 1 'SSA (A^2)' 13270 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2047 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-15 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' Other 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0066 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 539 ? ? -108.66 -100.18 2 1 GLN A 562 ? ? 45.00 -126.44 3 1 HIS B 539 ? ? -112.74 -98.38 4 1 GLN B 562 ? ? 44.49 -127.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PHE -3 ? CD1 ? A PHE 20 CD1 2 1 Y 1 A PHE -3 ? CD2 ? A PHE 20 CD2 3 1 Y 1 A PHE -3 ? CE1 ? A PHE 20 CE1 4 1 Y 1 A PHE -3 ? CE2 ? A PHE 20 CE2 5 1 Y 1 A PHE -3 ? CZ ? A PHE 20 CZ 6 1 Y 1 A GLU 522 ? CD ? A GLU 32 CD 7 1 Y 1 A GLU 522 ? OE1 ? A GLU 32 OE1 8 1 Y 1 A GLU 522 ? OE2 ? A GLU 32 OE2 9 1 Y 1 A GLU 585 ? CG ? A GLU 95 CG 10 1 Y 1 A GLU 585 ? CD ? A GLU 95 CD 11 1 Y 1 A GLU 585 ? OE1 ? A GLU 95 OE1 12 1 Y 1 A GLU 585 ? OE2 ? A GLU 95 OE2 13 1 Y 1 B MET -22 ? CG ? B MET 1 CG 14 1 Y 1 B MET -22 ? SD ? B MET 1 SD 15 1 Y 1 B MET -22 ? CE ? B MET 1 CE 16 1 Y 1 B ARG 518 ? NE ? B ARG 28 NE 17 1 Y 1 B ARG 518 ? CZ ? B ARG 28 CZ 18 1 Y 1 B ARG 518 ? NH1 ? B ARG 28 NH1 19 1 Y 1 B ARG 518 ? NH2 ? B ARG 28 NH2 20 1 Y 1 B GLU 522 ? CG ? B GLU 32 CG 21 1 Y 1 B GLU 522 ? CD ? B GLU 32 CD 22 1 Y 1 B GLU 522 ? OE1 ? B GLU 32 OE1 23 1 Y 1 B GLU 522 ? OE2 ? B GLU 32 OE2 24 1 Y 1 B GLU 523 ? CG ? B GLU 33 CG 25 1 Y 1 B GLU 523 ? CD ? B GLU 33 CD 26 1 Y 1 B GLU 523 ? OE1 ? B GLU 33 OE1 27 1 Y 1 B GLU 523 ? OE2 ? B GLU 33 OE2 28 1 Y 1 B ARG 553 ? CD ? B ARG 63 CD 29 1 Y 1 B ARG 553 ? NE ? B ARG 63 NE 30 1 Y 1 B ARG 553 ? CZ ? B ARG 63 CZ 31 1 Y 1 B ARG 553 ? NH1 ? B ARG 63 NH1 32 1 Y 1 B ARG 553 ? NH2 ? B ARG 63 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? A MET 1 2 1 Y 1 A HIS -21 ? A HIS 2 3 1 Y 1 A HIS -20 ? A HIS 3 4 1 Y 1 A HIS -19 ? A HIS 4 5 1 Y 1 A HIS -18 ? A HIS 5 6 1 Y 1 A HIS -17 ? A HIS 6 7 1 Y 1 A HIS -16 ? A HIS 7 8 1 Y 1 A ASP 595 ? A ASP 105 9 1 Y 1 A GLU 596 ? A GLU 106 10 1 Y 1 A VAL 597 ? A VAL 107 11 1 Y 1 A THR 598 ? A THR 108 12 1 Y 1 A PHE 599 ? A PHE 109 13 1 Y 1 B ASP 595 ? B ASP 105 14 1 Y 1 B GLU 596 ? B GLU 106 15 1 Y 1 B VAL 597 ? B VAL 107 16 1 Y 1 B THR 598 ? B THR 108 17 1 Y 1 B PHE 599 ? B PHE 109 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2F5Y 'PDB ENTRIES 2F5Y,2OCS,2V90' 2 ? 'experimental model' PDB 2OCS 'PDB ENTRIES 2F5Y,2OCS,2V90' 3 ? 'experimental model' PDB 2V90 'PDB ENTRIES 2F5Y,2OCS,2V90' #