HEADER HYDROLASE 16-MAY-08 2VTV TITLE PHAZ7 DEPOLYMERASE FROM PAUCIMONAS LEMOIGNEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHB DEPOLYMERASE PHAZ7; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 39-380 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PAUCIMONAS LEMOIGNEI; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS LEMOIGNEI; SOURCE 4 ORGANISM_TAXID: 29443 KEYWDS HYDROLASE, POLYMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.C.PAPAGEORGIOU,S.HERMAWAN,C.B.SINGH,D.JENDROSSEK REVDAT 8 09-OCT-24 2VTV 1 REMARK REVDAT 7 24-JUL-19 2VTV 1 REMARK REVDAT 6 10-JUL-19 2VTV 1 REMARK REVDAT 5 30-JAN-19 2VTV 1 REMARK REVDAT 4 05-DEC-18 2VTV 1 COMPND SOURCE JRNL REMARK REVDAT 4 2 1 DBREF REVDAT 3 24-FEB-09 2VTV 1 VERSN REVDAT 2 23-SEP-08 2VTV 1 JRNL REMARK REVDAT 1 26-AUG-08 2VTV 0 JRNL AUTH A.C.PAPAGEORGIOU,S.HERMAWAN,C.B.SINGH,D.JENDROSSEK JRNL TITL STRUCTURAL BASIS OF POLY(3-HYDROXYBUTYRATE) HYDROLYSIS BY JRNL TITL 2 PHAZ7 DEPOLYMERASE FROM PAUCIMONAS LEMOIGNEI. JRNL REF J. MOL. BIOL. V. 382 1184 2008 JRNL REFN ESSN 1089-8638 JRNL PMID 18706425 JRNL DOI 10.1016/J.JMB.2008.07.078 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.G.KAPETANIOU,R.BRAAZ,D.JENDROSSEK,A.C.PAPAGEORGIOU REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF A NOVEL REMARK 1 TITL 2 THERMOALKALOPHILIC POLY(3-HYDROXYBUTYRATE) DEPOLYMERASE REMARK 1 TITL 3 (PHAZ7) FROM PAUCIMONAS LEMOIGNEI. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 61 479 2005 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 16511073 REMARK 1 DOI 10.1107/S174430910501016X REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 51068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2609 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3427 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1650 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5058 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 1001 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : -0.80000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.553 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5233 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7120 ; 1.227 ; 1.920 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 688 ; 5.927 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;34.737 ;23.738 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 735 ;11.423 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;20.355 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 748 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4080 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2872 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3633 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 917 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 65 ; 0.160 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3397 ; 0.616 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5316 ; 1.012 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2163 ; 1.666 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1798 ; 2.068 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 293 AND 294 FROM BOTH SUBUNITS REMARK 3 HAVE NOT BEEN MODELLED DUE TO LACK OF DENSITY REMARK 4 REMARK 4 2VTV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1290036285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53749 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICRODIALYSIS, PH 10.5, NACL 150 MM REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 88.19150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 88.19150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2463 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 293 REMARK 465 ASN A 294 REMARK 465 TYR B 293 REMARK 465 ASN B 294 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2107 O HOH B 2364 2.15 REMARK 500 O HOH B 2009 O HOH B 2018 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 250 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 55 -8.41 -58.56 REMARK 500 SER A 136 -131.54 62.64 REMARK 500 ALA A 181 67.78 -153.52 REMARK 500 SER A 186 -153.05 -86.47 REMARK 500 ASN A 210 78.93 -156.73 REMARK 500 PHE A 251 -24.96 122.32 REMARK 500 THR B 2 67.40 97.72 REMARK 500 SER B 55 -6.16 -59.79 REMARK 500 SER B 136 -132.28 56.58 REMARK 500 ALA B 181 63.69 -150.55 REMARK 500 SER B 186 -162.10 -77.15 REMARK 500 ASN B 210 83.66 -155.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2011 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH B2039 DISTANCE = 5.99 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1343 DBREF 2VTV A 1 342 UNP Q939Q9 Q939Q9_PAULE 39 380 DBREF 2VTV B 1 342 UNP Q939Q9 Q939Q9_PAULE 39 380 SEQRES 1 A 342 LEU THR CYS GLY THR ASN SER GLY PHE VAL CYS LYS GLY SEQRES 2 A 342 THR GLN THR GLN TYR ALA GLY GLY PHE ALA PRO GLY VAL SEQRES 3 A 342 GLY TYR GLY GLY PHE GLY GLY GLY SER CYS THR ALA THR SEQRES 4 A 342 LYS THR PRO VAL ILE PHE ILE HIS GLY ASN GLY ASP ASN SEQRES 5 A 342 ALA ILE SER PHE ASP MET PRO PRO GLY ASN VAL SER GLY SEQRES 6 A 342 TYR GLY THR PRO ALA ARG SER VAL TYR ALA GLU LEU LYS SEQRES 7 A 342 ALA ARG GLY TYR ASN ASP CYS GLU ILE PHE GLY VAL THR SEQRES 8 A 342 TYR LEU SER SER SER GLU GLN GLY SER ALA GLN TYR ASN SEQRES 9 A 342 TYR HIS SER SER THR LYS TYR ALA ILE ILE LYS THR PHE SEQRES 10 A 342 ILE ASP LYS VAL LYS ALA TYR THR GLY LYS SER GLN VAL SEQRES 11 A 342 ASP ILE VAL ALA HIS SER MET GLY VAL SER MET SER LEU SEQRES 12 A 342 ALA THR LEU GLN TYR TYR ASN ASN TRP THR SER VAL ARG SEQRES 13 A 342 LYS PHE ILE ASN LEU ALA GLY GLY ILE ARG GLY LEU TYR SEQRES 14 A 342 SER CYS TYR TYR THR GLY TYR ALA ASN ALA ALA ALA PRO SEQRES 15 A 342 THR CYS GLY SER GLN ASN TYR TYR ASN SER TYR THR PHE SEQRES 16 A 342 GLY PHE PHE PRO GLU GLY TRP TYR TYR GLY VAL TRP VAL SEQRES 17 A 342 SER ASN PRO TRP THR GLY SER GLY SER THR ASN SER MET SEQRES 18 A 342 ARG ASP MET PRO ALA LYS ARG THR ALA VAL SER PHE TYR SEQRES 19 A 342 THR LEU SER ALA GLY PHE LYS ASP GLN VAL GLY CYS ALA SEQRES 20 A 342 THR ALA SER PHE TRP ALA GLY CYS ASP SER ALA ALA LYS SEQRES 21 A 342 PHE ALA SER THR THR SER ASN VAL LYS ALA GLN ILE ASN SEQRES 22 A 342 VAL GLY ALA GLY SER ASN ALA THR GLN ALA ASP TYR ASP SEQRES 23 A 342 TRP ALA ASP GLY MET PRO TYR ASN ALA GLY GLY GLY ASP SEQRES 24 A 342 THR THR ASN GLY VAL GLY HIS PHE ARG THR LYS THR ASN SEQRES 25 A 342 THR GLY ALA ILE ILE GLN ARG MET LEU LEU THR THR CYS SEQRES 26 A 342 THR GLY LEU ASP CYS ALA ALA GLU TYR THR THR GLY PRO SEQRES 27 A 342 LYS ALA ALA TYR SEQRES 1 B 342 LEU THR CYS GLY THR ASN SER GLY PHE VAL CYS LYS GLY SEQRES 2 B 342 THR GLN THR GLN TYR ALA GLY GLY PHE ALA PRO GLY VAL SEQRES 3 B 342 GLY TYR GLY GLY PHE GLY GLY GLY SER CYS THR ALA THR SEQRES 4 B 342 LYS THR PRO VAL ILE PHE ILE HIS GLY ASN GLY ASP ASN SEQRES 5 B 342 ALA ILE SER PHE ASP MET PRO PRO GLY ASN VAL SER GLY SEQRES 6 B 342 TYR GLY THR PRO ALA ARG SER VAL TYR ALA GLU LEU LYS SEQRES 7 B 342 ALA ARG GLY TYR ASN ASP CYS GLU ILE PHE GLY VAL THR SEQRES 8 B 342 TYR LEU SER SER SER GLU GLN GLY SER ALA GLN TYR ASN SEQRES 9 B 342 TYR HIS SER SER THR LYS TYR ALA ILE ILE LYS THR PHE SEQRES 10 B 342 ILE ASP LYS VAL LYS ALA TYR THR GLY LYS SER GLN VAL SEQRES 11 B 342 ASP ILE VAL ALA HIS SER MET GLY VAL SER MET SER LEU SEQRES 12 B 342 ALA THR LEU GLN TYR TYR ASN ASN TRP THR SER VAL ARG SEQRES 13 B 342 LYS PHE ILE ASN LEU ALA GLY GLY ILE ARG GLY LEU TYR SEQRES 14 B 342 SER CYS TYR TYR THR GLY TYR ALA ASN ALA ALA ALA PRO SEQRES 15 B 342 THR CYS GLY SER GLN ASN TYR TYR ASN SER TYR THR PHE SEQRES 16 B 342 GLY PHE PHE PRO GLU GLY TRP TYR TYR GLY VAL TRP VAL SEQRES 17 B 342 SER ASN PRO TRP THR GLY SER GLY SER THR ASN SER MET SEQRES 18 B 342 ARG ASP MET PRO ALA LYS ARG THR ALA VAL SER PHE TYR SEQRES 19 B 342 THR LEU SER ALA GLY PHE LYS ASP GLN VAL GLY CYS ALA SEQRES 20 B 342 THR ALA SER PHE TRP ALA GLY CYS ASP SER ALA ALA LYS SEQRES 21 B 342 PHE ALA SER THR THR SER ASN VAL LYS ALA GLN ILE ASN SEQRES 22 B 342 VAL GLY ALA GLY SER ASN ALA THR GLN ALA ASP TYR ASP SEQRES 23 B 342 TRP ALA ASP GLY MET PRO TYR ASN ALA GLY GLY GLY ASP SEQRES 24 B 342 THR THR ASN GLY VAL GLY HIS PHE ARG THR LYS THR ASN SEQRES 25 B 342 THR GLY ALA ILE ILE GLN ARG MET LEU LEU THR THR CYS SEQRES 26 B 342 THR GLY LEU ASP CYS ALA ALA GLU TYR THR THR GLY PRO SEQRES 27 B 342 LYS ALA ALA TYR HET GOL A1343 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *1001(H2 O) HELIX 1 1 ASN A 52 MET A 58 5 7 HELIX 2 2 SER A 72 ARG A 80 1 9 HELIX 3 3 SER A 94 SER A 100 1 7 HELIX 4 4 ALA A 101 ASN A 104 5 4 HELIX 5 5 SER A 107 GLY A 126 1 20 HELIX 6 6 SER A 136 ASN A 150 1 15 HELIX 7 7 ASN A 151 THR A 153 5 3 HELIX 8 8 TYR A 169 GLY A 175 1 7 HELIX 9 9 ALA A 181 GLY A 185 5 5 HELIX 10 10 SER A 220 ARG A 222 5 3 HELIX 11 11 ASP A 223 ARG A 228 1 6 HELIX 12 12 ALA A 238 ASP A 242 5 5 HELIX 13 13 GLY A 254 ALA A 258 5 5 HELIX 14 14 ASP A 286 GLY A 290 5 5 HELIX 15 15 PHE A 307 ASN A 312 1 6 HELIX 16 16 THR A 313 THR A 323 1 11 HELIX 17 17 THR A 326 ALA A 332 5 7 HELIX 18 18 ASN B 52 MET B 58 5 7 HELIX 19 19 SER B 72 ARG B 80 1 9 HELIX 20 20 SER B 94 GLY B 99 1 6 HELIX 21 21 SER B 100 ASN B 104 5 5 HELIX 22 22 SER B 107 GLY B 126 1 20 HELIX 23 23 SER B 136 ASN B 150 1 15 HELIX 24 24 ASN B 151 THR B 153 5 3 HELIX 25 25 SER B 170 GLY B 175 1 6 HELIX 26 26 ALA B 181 GLY B 185 5 5 HELIX 27 27 SER B 220 ARG B 222 5 3 HELIX 28 28 ASP B 223 ARG B 228 1 6 HELIX 29 29 ALA B 238 LYS B 241 5 4 HELIX 30 30 ASP B 242 ALA B 247 1 6 HELIX 31 31 GLY B 254 ALA B 258 5 5 HELIX 32 32 ASP B 286 GLY B 290 5 5 HELIX 33 33 PHE B 307 ASN B 312 1 6 HELIX 34 34 THR B 313 THR B 323 1 11 HELIX 35 35 THR B 326 ALA B 332 5 7 SHEET 1 AA 9 THR A 16 TYR A 18 0 SHEET 2 AA 9 GLY A 30 GLY A 32 1 O GLY A 30 N GLN A 17 SHEET 3 AA 9 ILE A 87 VAL A 90 -1 O GLY A 89 N PHE A 31 SHEET 4 AA 9 VAL A 43 ILE A 46 1 O VAL A 43 N PHE A 88 SHEET 5 AA 9 VAL A 130 HIS A 135 1 O ASP A 131 N ILE A 44 SHEET 6 AA 9 VAL A 155 LEU A 161 1 N ARG A 156 O VAL A 130 SHEET 7 AA 9 SER A 232 SER A 237 1 O SER A 232 N PHE A 158 SHEET 8 AA 9 VAL A 268 ASN A 273 1 N LYS A 269 O PHE A 233 SHEET 9 AA 9 ALA A 340 ALA A 341 -1 O ALA A 340 N ASN A 273 SHEET 1 AB 2 GLY A 201 TYR A 203 0 SHEET 2 AB 2 VAL A 206 VAL A 208 -1 O VAL A 206 N TYR A 203 SHEET 1 BA 9 THR B 16 TYR B 18 0 SHEET 2 BA 9 GLY B 30 GLY B 32 1 O GLY B 30 N GLN B 17 SHEET 3 BA 9 ILE B 87 VAL B 90 -1 O GLY B 89 N PHE B 31 SHEET 4 BA 9 VAL B 43 ILE B 46 1 O VAL B 43 N PHE B 88 SHEET 5 BA 9 VAL B 130 HIS B 135 1 O ASP B 131 N ILE B 44 SHEET 6 BA 9 VAL B 155 LEU B 161 1 N ARG B 156 O VAL B 130 SHEET 7 BA 9 SER B 232 SER B 237 1 O SER B 232 N PHE B 158 SHEET 8 BA 9 VAL B 268 ASN B 273 1 N LYS B 269 O PHE B 233 SHEET 9 BA 9 ALA B 340 ALA B 341 -1 O ALA B 340 N ASN B 273 SHEET 1 BB 2 GLY B 201 TYR B 203 0 SHEET 2 BB 2 VAL B 206 VAL B 208 -1 O VAL B 206 N TYR B 203 SSBOND 1 CYS A 3 CYS A 11 1555 1555 2.07 SSBOND 2 CYS A 36 CYS A 85 1555 1555 2.83 SSBOND 3 CYS A 171 CYS A 184 1555 1555 2.56 SSBOND 4 CYS A 246 CYS A 255 1555 1555 2.07 SSBOND 5 CYS A 325 CYS A 330 1555 1555 2.11 SSBOND 6 CYS B 3 CYS B 11 1555 1555 2.06 SSBOND 7 CYS B 171 CYS B 184 1555 1555 2.10 SSBOND 8 CYS B 246 CYS B 255 1555 1555 2.07 SSBOND 9 CYS B 325 CYS B 330 1555 1555 2.09 CISPEP 1 SER A 250 PHE A 251 0 -23.71 CISPEP 2 LEU B 1 THR B 2 0 -28.97 SITE 1 AC1 10 ARG A 166 SER A 257 LYS A 260 HOH A2302 SITE 2 AC1 10 HOH A2523 HOH A2524 ARG B 166 SER B 257 SITE 3 AC1 10 LYS B 260 HOH B2268 CRYST1 176.383 46.380 85.779 90.00 99.78 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005669 0.000000 0.000977 0.00000 SCALE2 0.000000 0.021561 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011830 0.00000