HEADER SUGAR BINDING PROTEIN 30-MAY-08 2VUV TITLE CRYSTAL STRUCTURE OF CODAKINE AT 1.3A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CODAKINE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 20-148 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CODAKIA ORBICULARIS; SOURCE 3 ORGANISM_TAXID: 13016 KEYWDS SUGAR-BINDING PROTEIN, C-TYPE, LECTIN, MANNOSE, CODAKINE, KEYWDS 2 INVERTEBRATE, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.GOURDINE,G.C.CIOCI,L.MIGUET,C.UNVERZAGT,A.VARROT,C.GAUTHIER, AUTHOR 2 E.J.SMITH-RAVIN,A.IMBERTY REVDAT 5 01-MAY-24 2VUV 1 REMARK LINK REVDAT 4 24-FEB-09 2VUV 1 VERSN REVDAT 3 04-NOV-08 2VUV 1 JRNL REMARK SSBOND REVDAT 2 19-AUG-08 2VUV 1 AUTHOR JRNL REVDAT 1 05-AUG-08 2VUV 0 JRNL AUTH J.P.GOURDINE,G.C.CIOCI,L.MIGUET,C.UNVERZAGT,D.V.SILVA, JRNL AUTH 2 A.VARROT,C.GAUTIER,E.J.SMITH-RAVIN,A.IMBERTY JRNL TITL HIGH AFFINITY INTERACTION BETWEEN A BIVALVE C-TYPE LECTIN JRNL TITL 2 AND A BIANTENNARY COMPLEX-TYPE N-GLYCAN REVEALED BY JRNL TITL 3 CRYSTALLOGRAPHY AND MICROCALORIMETRY. JRNL REF J.BIOL.CHEM. V. 283 30112 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18687680 JRNL DOI 10.1074/JBC.M804353200 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 3 NUMBER OF REFLECTIONS : 26746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1370 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 945 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.2300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 992 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94300 REMARK 3 B22 (A**2) : -0.30600 REMARK 3 B33 (A**2) : 0.12900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.55200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.049 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.049 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.641 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1122 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 724 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1541 ; 1.724 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1749 ; 0.955 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 145 ; 6.361 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;38.215 ;25.357 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 150 ;11.517 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;16.083 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1350 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 237 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 238 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 787 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 564 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 535 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 116 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.554 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 20 ; 0.360 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 704 ; 1.187 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1089 ; 1.664 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 513 ; 2.421 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 452 ; 3.518 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VUV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1290036423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26746 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 33.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ACORN REMARK 200 STARTING MODEL: HOMOLOGY MODEL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M DI-AMMONIUM CITRATE PH 5, 20% REMARK 280 W/V PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.45400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 15.19750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.45400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 15.19750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2015 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2151 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2172 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 10 -125.76 53.72 REMARK 500 ASP A 85 -72.73 -117.49 REMARK 500 ASP A 85 -58.85 -131.37 REMARK 500 ARG A 88 38.59 -140.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 200 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 93 OE1 REMARK 620 2 ASN A 95 OD1 71.6 REMARK 620 3 GLU A 101 OE1 142.4 75.3 REMARK 620 4 ASN A 112 OD1 66.9 137.9 146.0 REMARK 620 5 ASP A 113 OD1 72.1 89.1 90.1 84.9 REMARK 620 6 ASP A 113 O 130.7 141.3 70.5 75.9 73.6 REMARK 620 7 GOL A 300 O3 74.8 79.1 116.0 83.5 146.9 132.4 REMARK 620 8 GOL A 300 O2 135.0 120.6 78.0 85.9 142.9 69.3 66.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VUZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CODAKINE IN COMPLEX WITH BIANTENNARY REMARK 900 NONASACCHARIDE AT 1.7A RESOLUTION DBREF 2VUV A 1 129 UNP Q3KVL7 Q3KVL7_9BIVA 20 148 SEQADV 2VUV LYS A 54 UNP Q3KVL7 ARG 73 CONFLICT SEQRES 1 A 129 GLY CYS PRO ASP GLY TRP THR GLN PHE LEU ASP LEU CYS SEQRES 2 A 129 TYR ILE TYR GLN SER ALA LYS ALA SER TRP ALA SER ALA SEQRES 3 A 129 GLN SER SER CYS GLN ALA LEU GLY GLY ILE LEU ALA GLU SEQRES 4 A 129 PRO ASP THR ALA CYS GLU ASN GLU VAL LEU ILE HIS MET SEQRES 5 A 129 CYS LYS GLU ASN GLY ASP ALA GLY SER PHE GLY PRO TRP SEQRES 6 A 129 LEU GLY GLY GLN LYS VAL GLY GLY ALA TRP GLN TRP SER SEQRES 7 A 129 SER SER GLY ALA ALA PHE ASP TYR LEU ARG TRP GLY HYP SEQRES 8 A 129 ASN GLU PRO ASN ASN SER GLY GLY ASN GLU ASP CYS LEU SEQRES 9 A 129 HIS TYR ASN TRP LEU SER TRP ASN ASP LEU ARG CYS HIS SEQRES 10 A 129 TYR GLN ALA SER TYR LEU CYS GLN ARG ALA ALA GLU MODRES 2VUV HYP A 91 PRO 4-HYDROXYPROLINE HET HYP A 91 8 HET CA A 200 1 HET GOL A 300 6 HET GOL A 400 6 HET CIT A 500 13 HETNAM HYP 4-HYDROXYPROLINE HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM CIT CITRIC ACID HETSYN HYP HYDROXYPROLINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 HYP C5 H9 N O3 FORMUL 2 CA CA 2+ FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 CIT C6 H8 O7 FORMUL 6 HOH *174(H2 O) HELIX 1 1 SER A 22 LEU A 33 1 12 HELIX 2 2 THR A 42 ASN A 56 1 15 SHEET 1 AA 4 THR A 7 PHE A 9 0 SHEET 2 AA 4 LEU A 12 ALA A 21 -1 O LEU A 12 N PHE A 9 SHEET 3 AA 4 ALA A 120 ALA A 127 -1 O ALA A 120 N ALA A 21 SHEET 4 AA 4 ILE A 36 LEU A 37 -1 O ILE A 36 N GLN A 125 SHEET 1 AB 4 ALA A 74 TRP A 77 0 SHEET 2 AB 4 TRP A 65 VAL A 71 -1 O GLN A 69 N GLN A 76 SHEET 3 AB 4 CYS A 103 ASN A 107 -1 O LEU A 104 N LEU A 66 SHEET 4 AB 4 SER A 110 LEU A 114 -1 O SER A 110 N ASN A 107 SSBOND 1 CYS A 2 CYS A 13 1555 1555 2.05 SSBOND 2 CYS A 30 CYS A 124 1555 1555 2.06 SSBOND 3 CYS A 44 CYS A 44 1555 2556 2.05 SSBOND 4 CYS A 103 CYS A 116 1555 1555 2.08 LINK C GLY A 90 N HYP A 91 1555 1555 1.35 LINK C HYP A 91 N ASN A 92 1555 1555 1.31 LINK OE1 GLU A 93 CA CA A 200 1555 1555 2.60 LINK OD1 ASN A 95 CA CA A 200 1555 1555 2.41 LINK OE1 GLU A 101 CA CA A 200 1555 1555 2.43 LINK OD1 ASN A 112 CA CA A 200 1555 1555 2.43 LINK OD1 ASP A 113 CA CA A 200 1555 1555 2.36 LINK O ASP A 113 CA CA A 200 1555 1555 2.61 LINK CA CA A 200 O3 GOL A 300 1555 1555 2.49 LINK CA CA A 200 O2 GOL A 300 1555 1555 2.50 CISPEP 1 GLU A 93 PRO A 94 0 -1.82 SITE 1 AC1 6 GLU A 93 ASN A 95 GLU A 101 ASN A 112 SITE 2 AC1 6 ASP A 113 GOL A 300 SITE 1 AC2 7 GLU A 93 ASN A 95 GLU A 101 ASN A 112 SITE 2 AC2 7 ASP A 113 CA A 200 HOH A2169 SITE 1 AC3 7 LYS A 20 ASN A 56 GLY A 57 ASP A 58 SITE 2 AC3 7 HOH A2033 HOH A2152 HOH A2170 SITE 1 AC4 11 ASN A 100 ASP A 102 ARG A 115 CYS A 116 SITE 2 AC4 11 HIS A 117 HOH A2102 HOH A2148 HOH A2171 SITE 3 AC4 11 HOH A2172 HOH A2173 HOH A2174 CRYST1 82.908 30.395 67.088 90.00 133.86 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012062 0.000000 0.011591 0.00000 SCALE2 0.000000 0.032900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020673 0.00000