HEADER TOXIN 08-JUL-08 2VXR TITLE CRYSTAL STRUCTURE OF THE BOTULINUM NEUROTOXIN SEROTYPE G BINDING TITLE 2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTULINUM NEUROTOXIN TYPE G; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BINDING DOMAIN, RESIDUES 863-1297; COMPND 5 SYNONYM: BONT/G, BONTOXILYSIN-G; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (AI); SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TOXIN, HYDROLASE, NEUROTOXIN, GANGLIOSIDE, PROTEASE, RECEPTOR, KEYWDS 2 SECRETED, BOTULINUM, BINDING DOMAIN, METALLOPROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR P.STENMARK,J.DUPUY,R.C.STEVENS REVDAT 4 13-DEC-23 2VXR 1 REMARK REVDAT 3 20-JUL-11 2VXR 1 JRNL REVDAT 2 13-JUL-11 2VXR 1 VERSN REVDAT 1 07-JUL-09 2VXR 0 JRNL AUTH P.STENMARK,M.DONG,J.DUPUY,E.R.CHAPMAN,R.C.STEVENS JRNL TITL CRYSTAL STRUCTURE OF THE BOTULINUM NEUROTOXIN TYPE G BINDING JRNL TITL 2 DOMAIN: INSIGHT INTO CELL SURFACE BINDING. JRNL REF J.MOL.BIOL. V. 397 1287 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20219474 JRNL DOI 10.1016/J.JMB.2010.02.041 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 38602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2049 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2804 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1840 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3538 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 430 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.109 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3645 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2436 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4937 ; 1.403 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5914 ; 0.858 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 428 ; 7.051 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 194 ;37.585 ;24.948 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 627 ;12.135 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;14.558 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 526 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4046 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 783 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 598 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2588 ; 0.193 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1801 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1937 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 339 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.279 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 34 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2770 ; 1.003 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3453 ; 1.229 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1869 ; 2.148 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1483 ; 3.073 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 868 A 880 REMARK 3 ORIGIN FOR THE GROUP (A): 31.3810 31.6360 29.6720 REMARK 3 T TENSOR REMARK 3 T11: 0.0114 T22: 0.0526 REMARK 3 T33: 0.0831 T12: 0.0120 REMARK 3 T13: -0.0371 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 25.6821 L22: 9.0009 REMARK 3 L33: 13.7033 L12: 9.6044 REMARK 3 L13: -15.7506 L23: -8.4891 REMARK 3 S TENSOR REMARK 3 S11: 0.4213 S12: -0.5938 S13: 0.4703 REMARK 3 S21: 0.5012 S22: -0.2990 S23: -0.2731 REMARK 3 S31: -0.4018 S32: 0.4152 S33: -0.1223 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 881 A 937 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3220 24.8840 25.6320 REMARK 3 T TENSOR REMARK 3 T11: 0.0018 T22: 0.0291 REMARK 3 T33: 0.0260 T12: 0.0151 REMARK 3 T13: -0.0001 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.7945 L22: 1.2633 REMARK 3 L33: 1.4039 L12: 0.1820 REMARK 3 L13: -0.3704 L23: -0.6797 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: 0.0027 S13: -0.0173 REMARK 3 S21: -0.0482 S22: -0.0336 S23: -0.1133 REMARK 3 S31: 0.0487 S32: 0.1516 S33: 0.0155 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 938 A 1006 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4660 24.0860 13.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.0782 T22: 0.0153 REMARK 3 T33: 0.0256 T12: -0.0100 REMARK 3 T13: -0.0343 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.1961 L22: 1.6663 REMARK 3 L33: 1.4364 L12: -0.2775 REMARK 3 L13: 0.1455 L23: -1.1556 REMARK 3 S TENSOR REMARK 3 S11: 0.0437 S12: 0.0372 S13: -0.0962 REMARK 3 S21: -0.3390 S22: 0.0366 S23: 0.1506 REMARK 3 S31: 0.2434 S32: -0.0280 S33: -0.0803 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1007 A 1113 REMARK 3 ORIGIN FOR THE GROUP (A): 17.6530 32.4230 21.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.0331 T22: 0.0248 REMARK 3 T33: 0.0231 T12: 0.0021 REMARK 3 T13: -0.0135 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.3414 L22: 1.2636 REMARK 3 L33: 0.6432 L12: 0.0693 REMARK 3 L13: 0.0180 L23: -0.5922 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: -0.0168 S13: -0.0568 REMARK 3 S21: -0.0202 S22: 0.0285 S23: 0.0638 REMARK 3 S31: 0.0292 S32: -0.0224 S33: -0.0464 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1114 A 1166 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3340 53.4120 3.5570 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: 0.0257 REMARK 3 T33: 0.0223 T12: 0.0156 REMARK 3 T13: -0.0043 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.6229 L22: 0.9895 REMARK 3 L33: 1.2784 L12: -0.0310 REMARK 3 L13: 0.0631 L23: -0.6518 REMARK 3 S TENSOR REMARK 3 S11: 0.0265 S12: 0.0732 S13: 0.0709 REMARK 3 S21: -0.1333 S22: 0.0113 S23: -0.0208 REMARK 3 S31: 0.0769 S32: 0.0784 S33: -0.0377 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1167 A 1270 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5030 64.4950 10.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0226 REMARK 3 T33: 0.0376 T12: 0.0003 REMARK 3 T13: 0.0053 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.4575 L22: 0.7371 REMARK 3 L33: 0.6513 L12: -0.0573 REMARK 3 L13: 0.1370 L23: -0.1394 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: -0.0028 S13: 0.0365 REMARK 3 S21: -0.0079 S22: 0.0320 S23: 0.0654 REMARK 3 S31: -0.0396 S32: -0.0344 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1271 A 1298 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3040 50.9510 12.7390 REMARK 3 T TENSOR REMARK 3 T11: 0.0412 T22: 0.0467 REMARK 3 T33: 0.0356 T12: -0.0222 REMARK 3 T13: -0.0039 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 3.1672 L22: 3.7037 REMARK 3 L33: 1.8719 L12: -1.7544 REMARK 3 L13: -1.1354 L23: 1.5641 REMARK 3 S TENSOR REMARK 3 S11: 0.0088 S12: -0.1305 S13: -0.0060 REMARK 3 S21: 0.0402 S22: -0.0597 S23: 0.3140 REMARK 3 S31: 0.0352 S32: -0.1184 S33: 0.0509 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VXR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1290036792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40653 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2NP0 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M AMSO4, 85 MM CITRATE PH 4, 8 % REMARK 280 GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.76500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.71500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.71500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.76500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 818 REMARK 465 GLY A 819 REMARK 465 SER A 820 REMARK 465 SER A 821 REMARK 465 HIS A 822 REMARK 465 HIS A 823 REMARK 465 HIS A 824 REMARK 465 HIS A 825 REMARK 465 HIS A 826 REMARK 465 HIS A 827 REMARK 465 SER A 828 REMARK 465 SER A 829 REMARK 465 GLY A 830 REMARK 465 LEU A 831 REMARK 465 VAL A 832 REMARK 465 PRO A 833 REMARK 465 ARG A 834 REMARK 465 GLY A 835 REMARK 465 SER A 836 REMARK 465 HIS A 837 REMARK 465 MET A 838 REMARK 465 ASP A 839 REMARK 465 TYR A 840 REMARK 465 LYS A 841 REMARK 465 ASP A 842 REMARK 465 HIS A 843 REMARK 465 ASP A 844 REMARK 465 GLY A 845 REMARK 465 ASP A 846 REMARK 465 TYR A 847 REMARK 465 LYS A 848 REMARK 465 ASP A 849 REMARK 465 HIS A 850 REMARK 465 ASP A 851 REMARK 465 ILE A 852 REMARK 465 ASP A 853 REMARK 465 TYR A 854 REMARK 465 LYS A 855 REMARK 465 ASP A 856 REMARK 465 ASP A 857 REMARK 465 ASP A 858 REMARK 465 ASP A 859 REMARK 465 LYS A 860 REMARK 465 GLY A 861 REMARK 465 THR A 862 REMARK 465 SER A 863 REMARK 465 ASN A 864 REMARK 465 ILE A 865 REMARK 465 SER A 866 REMARK 465 SER A 867 REMARK 465 GLY A 1253 REMARK 465 TYR A 1254 REMARK 465 VAL A 1255 REMARK 465 GLN A 1299 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3084 O HOH A 3173 2.05 REMARK 500 O HOH A 3344 O HOH A 3406 2.12 REMARK 500 O HOH A 3076 O HOH A 3182 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1040 -140.64 -97.44 REMARK 500 LYS A1051 133.02 -179.26 REMARK 500 ASP A1236 -174.52 -171.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3387 DISTANCE = 6.59 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZB7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BOTULINUM NEUROTOXIN TYPE G LIGHT CHAIN DBREF 2VXR A 818 862 PDB 2VXR 2VXR 818 862 DBREF 2VXR A 863 1297 UNP Q60393 BXG_CLOBO 863 1297 DBREF 2VXR A 1298 1299 PDB 2VXR 2VXR 1298 1299 SEQRES 1 A 482 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 482 LEU VAL PRO ARG GLY SER HIS MET ASP TYR LYS ASP HIS SEQRES 3 A 482 ASP GLY ASP TYR LYS ASP HIS ASP ILE ASP TYR LYS ASP SEQRES 4 A 482 ASP ASP ASP LYS GLY THR SER ASN ILE SER SER ASN ALA SEQRES 5 A 482 ILE LEU SER LEU SER TYR ARG GLY GLY ARG LEU ILE ASP SEQRES 6 A 482 SER SER GLY TYR GLY ALA THR MET ASN VAL GLY SER ASP SEQRES 7 A 482 VAL ILE PHE ASN ASP ILE GLY ASN GLY GLN PHE LYS LEU SEQRES 8 A 482 ASN ASN SER GLU ASN SER ASN ILE THR ALA HIS GLN SER SEQRES 9 A 482 LYS PHE VAL VAL TYR ASP SER MET PHE ASP ASN PHE SER SEQRES 10 A 482 ILE ASN PHE TRP VAL ARG THR PRO LYS TYR ASN ASN ASN SEQRES 11 A 482 ASP ILE GLN THR TYR LEU GLN ASN GLU TYR THR ILE ILE SEQRES 12 A 482 SER CYS ILE LYS ASN ASP SER GLY TRP LYS VAL SER ILE SEQRES 13 A 482 LYS GLY ASN ARG ILE ILE TRP THR LEU ILE ASP VAL ASN SEQRES 14 A 482 ALA LYS SER LYS SER ILE PHE PHE GLU TYR SER ILE LYS SEQRES 15 A 482 ASP ASN ILE SER ASP TYR ILE ASN LYS TRP PHE SER ILE SEQRES 16 A 482 THR ILE THR ASN ASP ARG LEU GLY ASN ALA ASN ILE TYR SEQRES 17 A 482 ILE ASN GLY SER LEU LYS LYS SER GLU LYS ILE LEU ASN SEQRES 18 A 482 LEU ASP ARG ILE ASN SER SER ASN ASP ILE ASP PHE LYS SEQRES 19 A 482 LEU ILE ASN CYS THR ASP THR THR LYS PHE VAL TRP ILE SEQRES 20 A 482 LYS ASP PHE ASN ILE PHE GLY ARG GLU LEU ASN ALA THR SEQRES 21 A 482 GLU VAL SER SER LEU TYR TRP ILE GLN SER SER THR ASN SEQRES 22 A 482 THR LEU LYS ASP PHE TRP GLY ASN PRO LEU ARG TYR ASP SEQRES 23 A 482 THR GLN TYR TYR LEU PHE ASN GLN GLY MET GLN ASN ILE SEQRES 24 A 482 TYR ILE LYS TYR PHE SER LYS ALA SER MET GLY GLU THR SEQRES 25 A 482 ALA PRO ARG THR ASN PHE ASN ASN ALA ALA ILE ASN TYR SEQRES 26 A 482 GLN ASN LEU TYR LEU GLY LEU ARG PHE ILE ILE LYS LYS SEQRES 27 A 482 ALA SER ASN SER ARG ASN ILE ASN ASN ASP ASN ILE VAL SEQRES 28 A 482 ARG GLU GLY ASP TYR ILE TYR LEU ASN ILE ASP ASN ILE SEQRES 29 A 482 SER ASP GLU SER TYR ARG VAL TYR VAL LEU VAL ASN SER SEQRES 30 A 482 LYS GLU ILE GLN THR GLN LEU PHE LEU ALA PRO ILE ASN SEQRES 31 A 482 ASP ASP PRO THR PHE TYR ASP VAL LEU GLN ILE LYS LYS SEQRES 32 A 482 TYR TYR GLU LYS THR THR TYR ASN CYS GLN ILE LEU CYS SEQRES 33 A 482 GLU LYS ASP THR LYS THR PHE GLY LEU PHE GLY ILE GLY SEQRES 34 A 482 LYS PHE VAL LYS ASP TYR GLY TYR VAL TRP ASP THR TYR SEQRES 35 A 482 ASP ASN TYR PHE CYS ILE SER GLN TRP TYR LEU ARG ARG SEQRES 36 A 482 ILE SER GLU ASN ILE ASN LYS LEU ARG LEU GLY CYS ASN SEQRES 37 A 482 TRP GLN PHE ILE PRO VAL ASP GLU GLY TRP THR GLU LEU SEQRES 38 A 482 GLN HET SO4 A2001 5 HET SO4 A2002 5 HET SO4 A2003 5 HET GOL A2004 6 HET GOL A2005 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *430(H2 O) HELIX 1 1 ASN A 945 ASN A 947 5 3 HELIX 2 2 ASP A 948 ASN A 955 1 8 HELIX 3 3 ASN A 1075 SER A 1087 1 13 HELIX 4 4 SER A 1122 SER A 1125 5 4 HELIX 5 5 GLN A 1267 ILE A 1273 1 7 SHEET 1 AA 5 ARG A 879 ASP A 882 0 SHEET 2 AA 5 LEU A 871 ARG A 876 -1 O SER A 874 N ILE A 881 SHEET 3 AA 5 PHE A1061 PHE A1070 -1 O PHE A1067 N LEU A 873 SHEET 4 AA 5 GLN A 905 ASN A 909 -1 O PHE A 906 N ILE A1064 SHEET 5 AA 5 ILE A 897 ASN A 899 -1 O ILE A 897 N LYS A 907 SHEET 1 AB 7 ARG A 879 ASP A 882 0 SHEET 2 AB 7 LEU A 871 ARG A 876 -1 O SER A 874 N ILE A 881 SHEET 3 AB 7 PHE A1061 PHE A1070 -1 O PHE A1067 N LEU A 873 SHEET 4 AB 7 PHE A 933 ARG A 940 -1 O SER A 934 N PHE A1070 SHEET 5 AB 7 PHE A1010 ASN A1016 -1 O PHE A1010 N VAL A 939 SHEET 6 AB 7 ASN A1021 ILE A1026 -1 O ASN A1023 N THR A1015 SHEET 7 AB 7 SER A1029 LYS A1035 -1 O SER A1029 N ILE A1026 SHEET 1 AC 7 THR A 889 VAL A 892 0 SHEET 2 AC 7 ILE A 916 HIS A 919 -1 O THR A 917 N ASN A 891 SHEET 3 AC 7 ASP A1047 ILE A1053 -1 O ILE A1048 N ALA A 918 SHEET 4 AC 7 GLU A 956 LYS A 964 -1 O THR A 958 N ILE A1053 SHEET 5 AC 7 SER A 967 LYS A 974 -1 O SER A 967 N LYS A 964 SHEET 6 AC 7 ARG A 977 ILE A 983 -1 O ARG A 977 N LYS A 974 SHEET 7 AC 7 SER A 989 GLU A 995 -1 O LYS A 990 N LEU A 982 SHEET 1 AD 2 ASP A 927 SER A 928 0 SHEET 2 AD 2 ILE A1042 ASN A1043 -1 O ILE A1042 N SER A 928 SHEET 1 AE 6 PHE A1202 PRO A1205 0 SHEET 2 AE 6 TYR A1186 LEU A1191 -1 O ARG A1187 N ALA A1204 SHEET 3 AE 6 ILE A1174 ILE A1178 -1 O LEU A1176 N VAL A1188 SHEET 4 AE 6 ARG A1150 LYS A1155 -1 O ILE A1152 N ASN A1177 SHEET 5 AE 6 GLN A1105 ASN A1110 -1 O TYR A1106 N PHE A1151 SHEET 6 AE 6 TRP A1286 ILE A1289 -1 O GLN A1287 N PHE A1109 SHEET 1 AF 3 PHE A1202 PRO A1205 0 SHEET 2 AF 3 TYR A1186 LEU A1191 -1 O ARG A1187 N ALA A1204 SHEET 3 AF 3 PHE A1212 TYR A1213 -1 O TYR A1213 N VAL A1190 SHEET 1 AG 2 ILE A1116 PHE A1121 0 SHEET 2 AG 2 MET A1126 PRO A1131 -1 O MET A1126 N PHE A1121 SHEET 1 AH 2 ASN A1134 ASN A1136 0 SHEET 2 AH 2 ASN A1141 GLN A1143 -1 O TYR A1142 N PHE A1135 SHEET 1 AI 5 GLN A1198 GLN A1200 0 SHEET 2 AI 5 ASN A1261 SER A1266 -1 O ILE A1265 N THR A1199 SHEET 3 AI 5 THR A1239 LYS A1247 -1 O LEU A1242 N SER A1266 SHEET 4 AI 5 GLN A1230 ASP A1236 -1 O ILE A1231 N PHE A1243 SHEET 5 AI 5 GLN A1217 LYS A1219 -1 O GLN A1217 N LEU A1232 SITE 1 AC1 10 ASP A 927 SER A 928 MET A 929 PHE A 930 SITE 2 AC1 10 ARG A1041 ARG A1169 GLU A1170 GLY A1171 SITE 3 AC1 10 HOH A3283 HOH A3423 SITE 1 AC2 8 TYR A 996 SER A 997 ASP A1000 TYR A1005 SITE 2 AC2 8 HOH A3127 HOH A3424 HOH A3425 HOH A3426 SITE 1 AC3 6 ASP A1017 GLY A1020 ASN A1021 ASN A1023 SITE 2 AC3 6 GLU A1073 HOH A3143 SITE 1 AC4 13 SER A1194 GLU A1196 ILE A1197 GLN A1198 SITE 2 AC4 13 THR A1199 LYS A1238 THR A1239 PHE A1240 SITE 3 AC4 13 ILE A1265 GLN A1267 HOH A3360 HOH A3427 SITE 4 AC4 13 HOH A3428 SITE 1 AC5 8 LYS A 943 TYR A 944 ASN A 945 GLU A1293 SITE 2 AC5 8 GLY A1294 TRP A1295 THR A1296 HOH A3430 CRYST1 41.530 93.440 131.430 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007609 0.00000