HEADER CELL ADHESION 17-JUL-08 2VY3 TITLE TYPE IV SECRETION SYSTEM EFFECTOR PROTEIN BEPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL FILAMENTATION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-302; COMPND 5 SYNONYM: BEPA PROTEIN, BEPA; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: N-TERMINAL (HIS)6-TAG WITH THROMBIN CLEAVAGE SITE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE; SOURCE 3 ORGANISM_TAXID: 38323; SOURCE 4 ATCC: 49882; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRUN KEYWDS T4SS, OB FOLD, FIC DOMAIN, SUBSTRATE PROTEIN, PROTEIN TRANSLOCATION, KEYWDS 2 CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR D.V.PALANIVELU,T.SCHIRMER REVDAT 3 09-NOV-11 2VY3 1 JRNL REVDAT 2 13-JUL-11 2VY3 1 VERSN REVDAT 1 17-NOV-09 2VY3 0 JRNL AUTH D.V.PALANIVELU,A.GOEPFERT,M.MEURY,P.GUYE,C.DEHIO,T.SCHIRMER JRNL TITL FIC DOMAIN CATALYZED ADENYLYLATION: INSIGHT PROVIDED BY THE JRNL TITL 2 STRUCTURAL ANALYSIS OF THE TYPE IV SECRETION SYSTEM JRNL TITL 3 EFFECTOR BEPA. JRNL REF PROTEIN SCI. V. 20 492 2011 JRNL REFN ISSN 0961-8368 JRNL PMID 21213248 JRNL DOI 10.1002/PRO.581 REMARK 2 REMARK 2 RESOLUTION. 2.8 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 17372 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 937 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1334 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4668 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.39000 REMARK 3 B22 (A**2) : -0.82000 REMARK 3 B33 (A**2) : -1.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.411 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.321 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.143 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4545 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3066 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6148 ; 1.019 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7419 ; 0.826 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 567 ; 5.205 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;36.970 ;24.977 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 734 ;17.036 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.988 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 678 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5125 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 915 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 949 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2976 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2229 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2357 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 3 ; 0.137 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.159 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3513 ; 1.216 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4549 ; 1.437 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1873 ; 2.641 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1599 ; 3.827 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 7 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 13 A 22 1 REMARK 3 1 B 13 B 22 1 REMARK 3 2 A 26 A 33 1 REMARK 3 2 B 26 B 33 1 REMARK 3 3 A 36 A 58 1 REMARK 3 3 B 36 B 58 1 REMARK 3 4 A 62 A 100 1 REMARK 3 4 B 62 B 100 1 REMARK 3 5 A 501 A 501 1 REMARK 3 5 B 501 B 501 1 REMARK 3 7 A 502 A 502 1 REMARK 3 7 B 502 B 502 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1106 ; 0.18 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 1106 ; 0.18 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 1106 ; 0.38 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 1106 ; 0.38 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 125 A 142 1 REMARK 3 1 B 125 B 142 1 REMARK 3 2 A 144 A 155 1 REMARK 3 2 B 144 B 155 1 REMARK 3 3 A 160 A 174 1 REMARK 3 3 B 160 B 174 1 REMARK 3 4 A 176 A 238 1 REMARK 3 4 B 176 B 238 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 1435 ; 0.13 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 1435 ; 0.13 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 1435 ; 0.30 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 1435 ; 0.30 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 246 A 256 1 REMARK 3 1 B 246 B 256 1 REMARK 3 2 A 258 A 292 1 REMARK 3 2 B 258 B 292 1 REMARK 3 3 A 296 A 300 1 REMARK 3 3 B 296 B 300 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 603 ; 0.12 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 B (A): 603 ; 0.12 ; 0.05 REMARK 3 TIGHT THERMAL 3 A (A**2): 603 ; 0.23 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 603 ; 0.23 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 180 REMARK 3 RESIDUE RANGE : A 501 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6240 60.6630 49.2530 REMARK 3 T TENSOR REMARK 3 T11: -0.3316 T22: 0.0050 REMARK 3 T33: -0.3070 T12: 0.0372 REMARK 3 T13: -0.0095 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.5170 L22: 2.4019 REMARK 3 L33: 3.0791 L12: 1.2866 REMARK 3 L13: -1.1052 L23: -1.3430 REMARK 3 S TENSOR REMARK 3 S11: -0.1137 S12: -0.0326 S13: -0.0401 REMARK 3 S21: -0.1774 S22: 0.0064 S23: -0.1581 REMARK 3 S31: 0.2077 S32: 0.1213 S33: 0.1073 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 181 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6250 58.9920 70.1230 REMARK 3 T TENSOR REMARK 3 T11: -0.2281 T22: 0.3710 REMARK 3 T33: -0.2472 T12: -0.0110 REMARK 3 T13: -0.0095 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 3.1806 L22: 5.3483 REMARK 3 L33: 4.2234 L12: 3.2034 REMARK 3 L13: 3.0890 L23: 1.5000 REMARK 3 S TENSOR REMARK 3 S11: -0.1484 S12: 0.1836 S13: 0.4682 REMARK 3 S21: 0.2514 S22: 0.2203 S23: -0.6019 REMARK 3 S31: -0.1364 S32: 0.6152 S33: -0.0719 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0610 58.6760 85.9210 REMARK 3 T TENSOR REMARK 3 T11: 0.0754 T22: 0.5340 REMARK 3 T33: -0.1440 T12: -0.0143 REMARK 3 T13: -0.1337 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 7.8260 L22: 3.4410 REMARK 3 L33: 7.8208 L12: 0.7308 REMARK 3 L13: 3.3767 L23: -0.4176 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: -1.0577 S13: -0.1031 REMARK 3 S21: 0.9662 S22: -0.1693 S23: -0.5141 REMARK 3 S31: 0.4038 S32: 0.2731 S33: 0.2008 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 180 REMARK 3 RESIDUE RANGE : B 501 B 601 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0350 95.3860 84.9370 REMARK 3 T TENSOR REMARK 3 T11: -0.1146 T22: 0.0579 REMARK 3 T33: -0.2754 T12: 0.0360 REMARK 3 T13: -0.0210 T23: -0.0493 REMARK 3 L TENSOR REMARK 3 L11: 1.4444 L22: 4.9883 REMARK 3 L33: 5.1434 L12: -1.3115 REMARK 3 L13: 0.3238 L23: -0.3956 REMARK 3 S TENSOR REMARK 3 S11: 0.0683 S12: -0.1115 S13: -0.0172 REMARK 3 S21: -0.3888 S22: -0.0390 S23: 0.1350 REMARK 3 S31: -0.5969 S32: 0.0415 S33: -0.0292 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 181 B 244 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9670 95.4520 63.7980 REMARK 3 T TENSOR REMARK 3 T11: 0.0637 T22: 0.0707 REMARK 3 T33: -0.2521 T12: 0.0373 REMARK 3 T13: -0.0720 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 0.4351 L22: 5.3190 REMARK 3 L33: 4.8883 L12: 0.5308 REMARK 3 L13: -0.7659 L23: 3.1022 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: 0.2118 S13: -0.2236 REMARK 3 S21: -0.2856 S22: 0.0821 S23: -0.0309 REMARK 3 S31: -1.1584 S32: 0.1514 S33: -0.0658 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 245 B 302 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0550 94.0210 47.7960 REMARK 3 T TENSOR REMARK 3 T11: 0.5418 T22: 0.6351 REMARK 3 T33: -0.2346 T12: 0.0729 REMARK 3 T13: -0.0784 T23: -0.1456 REMARK 3 L TENSOR REMARK 3 L11: 9.1853 L22: 2.9905 REMARK 3 L33: 9.6223 L12: -4.4423 REMARK 3 L13: -2.4020 L23: -1.5903 REMARK 3 S TENSOR REMARK 3 S11: 0.7531 S12: 1.7340 S13: -0.4631 REMARK 3 S21: -1.6681 S22: -0.7088 S23: -0.4557 REMARK 3 S31: -0.8421 S32: -0.1842 S33: -0.0443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 4 REMARK 4 2VY3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-08. REMARK 100 THE PDBE ID CODE IS EBI-36888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18356 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.80 REMARK 200 RESOLUTION RANGE LOW (A) : 85.13 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : 5.56 REMARK 200 R MERGE (I) : 0.10 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.25 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.58 REMARK 200 R MERGE FOR SHELL (I) : 0.32 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.37 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.9 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17 MG/ML PROTEIN IN 20 MM REMARK 280 TRIS-HCL (PH 8.0), 500 MM NACL AND 2 MM REMARK 280 BETA-MERCAPTOETHANOL MIXED WITH 22 % POLYETHYLENE GLYCOL REMARK 280 4000, 0.1 M TRIS PH 8.7, 5 MM NICL2 IN A 1:1 (V:V) RATIO REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.66800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.34000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.34000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.66800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 LYS A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 THR A 8 REMARK 465 LYS A 9 REMARK 465 ASN A 10 REMARK 465 THR A 11 REMARK 465 MSE B 1 REMARK 465 PRO B 2 REMARK 465 LYS B 3 REMARK 465 ALA B 4 REMARK 465 LYS B 5 REMARK 465 ALA B 6 REMARK 465 LYS B 7 REMARK 465 THR B 8 REMARK 465 LYS B 9 REMARK 465 ASN B 10 REMARK 465 THR B 11 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY) REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES; REMARK 475 C=CHAIN IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ARG A 106 REMARK 475 THR A 107 REMARK 475 GLY A 108 REMARK 475 TRP A 109 REMARK 475 LYS A 110 REMARK 475 ASN A 111 REMARK 475 LYS B 105 REMARK 475 ARG B 106 REMARK 475 THR B 107 REMARK 475 GLY B 108 REMARK 475 TRP B 109 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; REMARK 480 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 480 I=INSERTION CODE): REMARK 480 M RES CSSEQI ATOMS REMARK 480 GLU A 121 CD OE1 OE2 REMARK 480 ARG A 125 NE CZ NH1 NH2 REMARK 480 LEU A 126 CD1 CD2 REMARK 480 GLU A 142 CD OE1 OE2 REMARK 480 LYS A 178 CD CE NZ REMARK 480 LYS A 191 CD CE NZ REMARK 480 LYS A 227 CD CE NZ REMARK 480 LYS A 234 CD CE NZ REMARK 480 ARG A 238 CG CD NE CZ NH1 NH2 REMARK 480 VAL A 240 CG1 CG2 REMARK 480 ASP A 242 CG OD1 OD2 REMARK 480 ARG A 243 CD NE CZ NH1 NH2 REMARK 480 ARG A 259 CD NE CZ NH1 NH2 REMARK 480 LYS A 271 CD CE NZ REMARK 480 LYS A 288 CG CD CE NZ REMARK 480 LYS A 291 CG CD CE NZ REMARK 480 LYS A 295 CD CE NZ REMARK 480 LYS B 42 CD CE NZ REMARK 480 LYS B 77 CE NZ REMARK 480 GLU B 103 CG CD OE1 OE2 REMARK 480 LYS B 110 CG CD CE NZ REMARK 480 GLU B 118 CG CD OE1 OE2 REMARK 480 GLU B 121 CD OE1 OE2 REMARK 480 ARG B 125 NE CZ NH1 NH2 REMARK 480 GLU B 142 CD OE1 OE2 REMARK 480 GLU B 150 CG CD OE1 OE2 REMARK 480 HIS B 159 CG ND1 CD2 CE1 NE2 REMARK 480 LYS B 178 CE NZ REMARK 480 LYS B 191 CD CE NZ REMARK 480 LYS B 227 CD CE NZ REMARK 480 LYS B 234 CE NZ REMARK 480 LYS B 249 CE NZ REMARK 480 ARG B 259 CD NE CZ NH1 NH2 REMARK 480 LYS B 271 CE NZ REMARK 480 GLU B 285 CG CD OE1 OE2 REMARK 480 LYS B 288 CD CE NZ REMARK 480 ILE B 289 CG1 CG2 CD1 REMARK 480 LYS B 291 CG CD CE NZ REMARK 480 LYS B 295 CD CE NZ REMARK 480 LYS B 302 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 72 O ALA A 83 2.17 REMARK 500 ND1 HIS B 72 O ALA B 83 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 105 C ARG A 106 N -0.213 REMARK 500 ARG A 125 CD ARG A 125 NE -0.128 REMARK 500 ASP A 242 CB ASP A 242 CG -0.145 REMARK 500 ARG A 243 CG ARG A 243 CD -0.349 REMARK 500 LYS A 291 CB LYS A 291 CG 0.177 REMARK 500 GLU B 103 CB GLU B 103 CG 0.139 REMARK 500 MSE B 104 C LYS B 105 N -0.288 REMARK 500 ARG B 125 CD ARG B 125 NE 0.181 REMARK 500 HIS B 159 CB HIS B 159 CG -0.301 REMARK 500 LYS B 249 CD LYS B 249 CE -0.165 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 125 CG - CD - NE ANGL. DEV. = 15.6 DEGREES REMARK 500 VAL A 240 CA - CB - CG2 ANGL. DEV. = -9.9 DEGREES REMARK 500 VAL A 240 CG1 - CB - CG2 ANGL. DEV. = -10.0 DEGREES REMARK 500 ARG A 243 CB - CG - CD ANGL. DEV. = 17.9 DEGREES REMARK 500 ARG A 243 CG - CD - NE ANGL. DEV. = -18.1 DEGREES REMARK 500 MSE B 104 O - C - N ANGL. DEV. = -16.9 DEGREES REMARK 500 LYS B 110 CA - CB - CG ANGL. DEV. = 15.5 DEGREES REMARK 500 LYS B 110 C - N - CA ANGL. DEV. = -19.0 DEGREES REMARK 500 HIS B 159 CA - CB - CG ANGL. DEV. = 27.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 82 35.05 -97.18 REMARK 500 GLU A 103 -63.09 -91.10 REMARK 500 MSE A 104 -66.54 87.85 REMARK 500 LYS A 105 117.60 75.41 REMARK 500 LYS A 288 -71.47 -61.03 REMARK 500 ILE B 13 -74.24 -79.13 REMARK 500 ARG B 106 56.36 97.39 REMARK 500 ASN B 134 53.68 39.49 REMARK 500 GLU B 203 -64.36 -99.19 REMARK 500 ASN B 235 18.58 57.67 REMARK 500 LYS B 288 -76.56 -62.42 REMARK 500 PRO B 292 103.71 -48.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MSE B 104 LYS B 105 -146.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MSE B 104 14.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2002 O REMARK 620 2 HIS A 17 NE2 148.2 REMARK 620 3 HIS A 18 NE2 99.1 101.5 REMARK 620 4 HOH A2001 O 75.9 104.4 136.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 502 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 45 NE2 REMARK 620 2 LYS A 49 NZ 93.5 REMARK 620 3 HOH A2004 O 99.5 72.6 REMARK 620 4 HOH A2003 O 102.4 133.2 61.5 REMARK 620 5 HIS B 231 NE2 105.7 114.2 153.2 103.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2002 O REMARK 620 2 HIS B 17 NE2 105.8 REMARK 620 3 HIS B 18 NE2 132.0 107.2 REMARK 620 4 HOH B2001 O 75.3 142.8 97.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 502 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 231 NE2 REMARK 620 2 HOH B2003 O 121.5 REMARK 620 3 HIS B 45 NE2 108.4 113.3 REMARK 620 4 LYS B 49 NZ 115.4 98.7 96.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 601 REMARK 999 REMARK 999 SEQUENCE REMARK 999 IN BOTH CHAINS, RESIDUES 1 TO 11 ARE MISSING DUE TO REMARK 999 DISORDER AND RESIDUES 303 TO 544 ARE MISSING DUE TO REMARK 999 PROTEOLYTIC CLEAVAGE AND - OR DISORDER. DBREF 2VY3 A 1 302 UNP Q6G2A9 Q6G2A9_BARHE 1 302 DBREF 2VY3 B 1 302 UNP Q6G2A9 Q6G2A9_BARHE 1 302 SEQRES 1 A 302 MSE PRO LYS ALA LYS ALA LYS THR LYS ASN THR GLU ILE SEQRES 2 A 302 ILE SER PRO HIS HIS TYR VAL TYR PRO ASN THR THR THR SEQRES 3 A 302 LEU LYS ASN LYS TYR GLY ILE LYS ASN LEU ASN ALA PHE SEQRES 4 A 302 LEU GLU LYS CYS SER HIS ASP THR ALA LYS ALA MSE ILE SEQRES 5 A 302 ASN LEU ARG GLU GLU SER LEU PRO GLU TYR PHE ASP THR SEQRES 6 A 302 ALA TYR LEU CYS HIS ILE HIS GLN GLN LEU PHE LYS ASN SEQRES 7 A 302 THR PHE GLU TRP ALA GLY TYR LEU ARG HIS ILE PRO PHE SEQRES 8 A 302 THR PHE ALA ASP GLY THR THR ALA ALA MSE PRO GLU MSE SEQRES 9 A 302 LYS ARG THR GLY TRP LYS ASN ALA PHE ALA ILE GLY ASP SEQRES 10 A 302 GLU ILE GLN GLU GLY LEU GLN ARG LEU ASP GLN THR LEU SEQRES 11 A 302 ALA GLU LYS ASN ASN LEU GLN GLY LEU THR ARG GLU GLU SEQRES 12 A 302 PHE ASN SER GLU ALA ILE GLU LEU PHE ASN SER LEU ASN SEQRES 13 A 302 GLN LEU HIS PRO PHE ARG GLU GLY ASN GLY ARG THR GLN SEQRES 14 A 302 ARG LEU PHE PHE GLU ASN LEU ALA LYS ALA ALA GLY HIS SEQRES 15 A 302 GLN LEU ASN PHE SER LEU ILE THR LYS GLU ARG MSE MSE SEQRES 16 A 302 VAL ALA SER VAL ALA VAL ALA GLU ASN GLY ASP LEU GLU SEQRES 17 A 302 PRO MSE GLN HIS LEU PHE GLU ASP ILE SER ASN PRO GLU SEQRES 18 A 302 LYS ILE ARG LEU LEU LYS GLU PHE MSE HIS THR MSE LYS SEQRES 19 A 302 ASN THR GLY ARG ASN VAL ASN ASP ARG PRO VAL MSE VAL SEQRES 20 A 302 ALA LYS GLU GLY GLU THR TYR THR GLY THR TYR ARG GLY SEQRES 21 A 302 ALA GLY LEU GLU GLY PHE ALA LEU ASN VAL LYS GLY ALA SEQRES 22 A 302 TYR ILE ILE GLY ASN ILE ASP HIS LEU PRO PRO GLU GLN SEQRES 23 A 302 LEU LYS ILE LEU LYS PRO GLY ASP LYS ILE THR PHE THR SEQRES 24 A 302 ALA PRO LYS SEQRES 1 B 302 MSE PRO LYS ALA LYS ALA LYS THR LYS ASN THR GLU ILE SEQRES 2 B 302 ILE SER PRO HIS HIS TYR VAL TYR PRO ASN THR THR THR SEQRES 3 B 302 LEU LYS ASN LYS TYR GLY ILE LYS ASN LEU ASN ALA PHE SEQRES 4 B 302 LEU GLU LYS CYS SER HIS ASP THR ALA LYS ALA MSE ILE SEQRES 5 B 302 ASN LEU ARG GLU GLU SER LEU PRO GLU TYR PHE ASP THR SEQRES 6 B 302 ALA TYR LEU CYS HIS ILE HIS GLN GLN LEU PHE LYS ASN SEQRES 7 B 302 THR PHE GLU TRP ALA GLY TYR LEU ARG HIS ILE PRO PHE SEQRES 8 B 302 THR PHE ALA ASP GLY THR THR ALA ALA MSE PRO GLU MSE SEQRES 9 B 302 LYS ARG THR GLY TRP LYS ASN ALA PHE ALA ILE GLY ASP SEQRES 10 B 302 GLU ILE GLN GLU GLY LEU GLN ARG LEU ASP GLN THR LEU SEQRES 11 B 302 ALA GLU LYS ASN ASN LEU GLN GLY LEU THR ARG GLU GLU SEQRES 12 B 302 PHE ASN SER GLU ALA ILE GLU LEU PHE ASN SER LEU ASN SEQRES 13 B 302 GLN LEU HIS PRO PHE ARG GLU GLY ASN GLY ARG THR GLN SEQRES 14 B 302 ARG LEU PHE PHE GLU ASN LEU ALA LYS ALA ALA GLY HIS SEQRES 15 B 302 GLN LEU ASN PHE SER LEU ILE THR LYS GLU ARG MSE MSE SEQRES 16 B 302 VAL ALA SER VAL ALA VAL ALA GLU ASN GLY ASP LEU GLU SEQRES 17 B 302 PRO MSE GLN HIS LEU PHE GLU ASP ILE SER ASN PRO GLU SEQRES 18 B 302 LYS ILE ARG LEU LEU LYS GLU PHE MSE HIS THR MSE LYS SEQRES 19 B 302 ASN THR GLY ARG ASN VAL ASN ASP ARG PRO VAL MSE VAL SEQRES 20 B 302 ALA LYS GLU GLY GLU THR TYR THR GLY THR TYR ARG GLY SEQRES 21 B 302 ALA GLY LEU GLU GLY PHE ALA LEU ASN VAL LYS GLY ALA SEQRES 22 B 302 TYR ILE ILE GLY ASN ILE ASP HIS LEU PRO PRO GLU GLN SEQRES 23 B 302 LEU LYS ILE LEU LYS PRO GLY ASP LYS ILE THR PHE THR SEQRES 24 B 302 ALA PRO LYS MODRES 2VY3 MSE A 51 MET SELENOMETHIONINE MODRES 2VY3 MSE A 101 MET SELENOMETHIONINE MODRES 2VY3 MSE A 104 MET SELENOMETHIONINE MODRES 2VY3 MSE A 194 MET SELENOMETHIONINE MODRES 2VY3 MSE A 195 MET SELENOMETHIONINE MODRES 2VY3 MSE A 210 MET SELENOMETHIONINE MODRES 2VY3 MSE A 230 MET SELENOMETHIONINE MODRES 2VY3 MSE A 233 MET SELENOMETHIONINE MODRES 2VY3 MSE A 246 MET SELENOMETHIONINE MODRES 2VY3 MSE B 51 MET SELENOMETHIONINE MODRES 2VY3 MSE B 101 MET SELENOMETHIONINE MODRES 2VY3 MSE B 104 MET SELENOMETHIONINE MODRES 2VY3 MSE B 194 MET SELENOMETHIONINE MODRES 2VY3 MSE B 195 MET SELENOMETHIONINE MODRES 2VY3 MSE B 210 MET SELENOMETHIONINE MODRES 2VY3 MSE B 230 MET SELENOMETHIONINE MODRES 2VY3 MSE B 233 MET SELENOMETHIONINE MODRES 2VY3 MSE B 246 MET SELENOMETHIONINE HET MSE A 51 8 HET MSE A 101 8 HET MSE A 104 8 HET MSE A 194 8 HET MSE A 195 8 HET MSE A 210 8 HET MSE A 230 8 HET MSE A 233 8 HET MSE A 246 8 HET NI A 501 1 HET NI A 502 1 HET CL A 601 1 HET MSE B 51 8 HET MSE B 101 8 HET MSE B 104 8 HET MSE B 194 8 HET MSE B 195 8 HET MSE B 210 8 HET MSE B 230 8 HET MSE B 233 8 HET MSE B 246 8 HET NI B 501 1 HET NI B 502 1 HET CL B 601 1 HETNAM CL CHLORIDE ION HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION FORMUL 3 CL 2(CL 1-) FORMUL 4 MSE 18(C5 H11 N O2 SE) FORMUL 5 NI 4(NI 2+) FORMUL 6 HOH *7(H2 O) HELIX 1 1 PRO A 16 TYR A 19 5 4 HELIX 2 2 ASN A 35 ARG A 55 1 21 HELIX 3 3 ASP A 64 LYS A 77 1 14 HELIX 4 4 GLY A 116 LYS A 133 1 18 HELIX 5 5 ASN A 134 GLN A 137 5 4 HELIX 6 6 THR A 140 HIS A 159 1 20 HELIX 7 7 GLY A 164 ALA A 180 1 17 HELIX 8 8 ASN A 185 ILE A 189 5 5 HELIX 9 9 THR A 190 ASN A 204 1 15 HELIX 10 10 LEU A 207 ASN A 219 1 13 HELIX 11 11 ASN A 219 MSE A 233 1 15 HELIX 12 12 ASP A 280 LEU A 282 5 3 HELIX 13 13 PRO A 283 ILE A 289 1 7 HELIX 14 14 SER B 15 TYR B 19 5 5 HELIX 15 15 ASN B 35 GLU B 57 1 23 HELIX 16 16 ASP B 64 LYS B 77 1 14 HELIX 17 17 ASP B 117 LYS B 133 1 17 HELIX 18 18 ASN B 134 GLN B 137 5 4 HELIX 19 19 THR B 140 GLN B 157 1 18 HELIX 20 20 GLY B 164 ALA B 180 1 17 HELIX 21 21 ASN B 185 ILE B 189 5 5 HELIX 22 22 THR B 190 ASN B 204 1 15 HELIX 23 23 LEU B 207 ASN B 219 1 13 HELIX 24 24 ASN B 219 LYS B 234 1 16 HELIX 25 25 ASP B 280 LEU B 282 5 3 HELIX 26 26 PRO B 283 ILE B 289 1 7 SHEET 1 AA 3 ILE A 14 SER A 15 0 SHEET 2 AA 3 THR A 98 ALA A 99 1 O THR A 98 N SER A 15 SHEET 3 AA 3 PHE A 91 THR A 92 -1 O PHE A 91 N ALA A 99 SHEET 1 AB 5 VAL A 245 VAL A 247 0 SHEET 2 AB 5 TYR A 274 ASN A 278 1 O TYR A 274 N MSE A 246 SHEET 3 AB 5 GLY A 265 ASN A 269 -1 O PHE A 266 N GLY A 277 SHEET 4 AB 5 THR A 253 ALA A 261 -1 O THR A 257 N ASN A 269 SHEET 5 AB 5 LYS A 295 THR A 299 -1 O ILE A 296 N GLY A 256 SHEET 1 BA 2 PHE B 91 THR B 92 0 SHEET 2 BA 2 THR B 98 ALA B 99 -1 O ALA B 99 N PHE B 91 SHEET 1 BB 5 VAL B 245 VAL B 247 0 SHEET 2 BB 5 TYR B 274 ASN B 278 1 O TYR B 274 N MSE B 246 SHEET 3 BB 5 GLY B 265 ASN B 269 -1 O PHE B 266 N GLY B 277 SHEET 4 BB 5 THR B 253 TYR B 258 -1 O THR B 257 N ASN B 269 SHEET 5 BB 5 LYS B 295 THR B 299 -1 O ILE B 296 N GLY B 256 LINK C ALA A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N ILE A 52 1555 1555 1.33 LINK C ALA A 100 N MSE A 101 1555 1555 1.32 LINK C MSE A 101 N PRO A 102 1555 1555 1.34 LINK C GLU A 103 N MSE A 104 1555 1555 1.34 LINK C MSE A 104 N LYS A 105 1555 1555 1.33 LINK C ARG A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N MSE A 195 1555 1555 1.32 LINK C MSE A 195 N VAL A 196 1555 1555 1.33 LINK C PRO A 209 N MSE A 210 1555 1555 1.34 LINK C MSE A 210 N GLN A 211 1555 1555 1.32 LINK C PHE A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N HIS A 231 1555 1555 1.33 LINK C THR A 232 N MSE A 233 1555 1555 1.33 LINK C MSE A 233 N LYS A 234 1555 1555 1.33 LINK C VAL A 245 N MSE A 246 1555 1555 1.33 LINK C MSE A 246 N VAL A 247 1555 1555 1.33 LINK NI NI A 501 O HOH A2002 1555 1555 1.99 LINK NI NI A 501 NE2 HIS A 17 1555 1555 2.05 LINK NI NI A 501 NE2 HIS A 18 1555 1555 2.04 LINK NI NI A 501 O HOH A2001 1555 1555 2.18 LINK NI NI A 502 NE2 HIS A 45 1555 1555 2.05 LINK NI NI A 502 NZ LYS A 49 1555 1555 2.02 LINK NI NI A 502 O HOH A2004 1555 1555 2.44 LINK NI NI A 502 NE2 HIS B 231 1555 1555 2.03 LINK NI NI A 502 O HOH A2003 1555 1555 2.16 LINK C ALA B 50 N MSE B 51 1555 1555 1.34 LINK C MSE B 51 N ILE B 52 1555 1555 1.33 LINK C ALA B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N PRO B 102 1555 1555 1.35 LINK C GLU B 103 N MSE B 104 1555 1555 1.34 LINK C MSE B 104 N LYS B 105 1555 1555 1.04 LINK C ARG B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N MSE B 195 1555 1555 1.32 LINK C MSE B 195 N VAL B 196 1555 1555 1.33 LINK C PRO B 209 N MSE B 210 1555 1555 1.33 LINK C MSE B 210 N GLN B 211 1555 1555 1.32 LINK C PHE B 229 N MSE B 230 1555 1555 1.33 LINK C MSE B 230 N HIS B 231 1555 1555 1.34 LINK C THR B 232 N MSE B 233 1555 1555 1.33 LINK C MSE B 233 N LYS B 234 1555 1555 1.33 LINK C VAL B 245 N MSE B 246 1555 1555 1.34 LINK C MSE B 246 N VAL B 247 1555 1555 1.33 LINK NI NI B 501 NE2 HIS B 17 1555 1555 2.02 LINK NI NI B 501 NE2 HIS B 18 1555 1555 2.05 LINK NI NI B 501 O HOH B2001 1555 1555 2.38 LINK NI NI B 501 O HOH B2002 1555 1555 2.26 LINK NI NI B 502 O HOH B2003 1555 1555 2.20 LINK NI NI B 502 NE2 HIS B 45 1555 1555 2.07 LINK NI NI B 502 NZ LYS B 49 1555 1555 2.00 LINK NI NI B 502 NE2 HIS A 231 1555 1555 2.04 SITE 1 AC1 4 HIS A 17 HIS A 18 HOH A2001 HOH A2002 SITE 1 AC2 5 HIS A 45 LYS A 49 HOH A2003 HOH A2004 SITE 2 AC2 5 HIS B 231 SITE 1 AC3 3 GLY A 164 GLY A 166 ARG A 167 SITE 1 AC4 4 HIS B 17 HIS B 18 HOH B2001 HOH B2002 SITE 1 AC5 4 HIS A 231 HIS B 45 LYS B 49 HOH B2003 SITE 1 AC6 3 GLY B 164 GLY B 166 ARG B 167 CRYST1 73.336 84.610 126.680 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013636 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011819 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007894 0.00000 MTRIX1 1 0.843510 -0.529030 -0.092790 49.68700 1 MTRIX2 1 -0.522840 -0.848310 -0.083700 147.86800 1 MTRIX3 1 -0.122990 0.022080 -0.992160 136.03600 1 MTRIX1 2 0.846760 -0.530070 -0.045040 47.46400 1 MTRIX2 2 -0.529180 -0.847950 0.030740 150.61100 1 MTRIX3 2 -0.054480 -0.002200 -0.998510 134.69300 1