data_2VZI # _entry.id 2VZI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VZI pdb_00002vzi 10.2210/pdb2vzi/pdb PDBE EBI-37096 ? ? WWPDB D_1290037096 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VZG unspecified 'CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA-PARVIN IN COMPLEX WITH PAXILLIN LD2 MOTIF' PDB 2VZD unspecified 'CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN IN COMPLEX WITH PAXILLIN LD1 MOTIF' PDB 1KL0 unspecified 'THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF' PDB 2VZC unspecified 'CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN' PDB 1KKY unspecified 'THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VZI _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-08-01 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lorenz, S.' 1 ? 'Vakonakis, I.' 2 ? 'Lowe, E.D.' 3 ? 'Campbell, I.D.' 4 ? 'Noble, M.E.M.' 5 ? 'Hoellerer, M.K.' 6 ? # _citation.id primary _citation.title 'Structural analysis of the interactions between paxillin LD motifs and alpha-parvin.' _citation.journal_abbrev Structure _citation.journal_volume 16 _citation.page_first 1521 _citation.page_last 1531 _citation.year 2008 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18940607 _citation.pdbx_database_id_DOI 10.1016/j.str.2008.08.007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lorenz, S.' 1 ? primary 'Vakonakis, I.' 2 ? primary 'Lowe, E.D.' 3 ? primary 'Campbell, I.D.' 4 ? primary 'Noble, M.E.' 5 ? primary 'Hoellerer, M.K.' 6 ? # _cell.entry_id 2VZI _cell.length_a 75.420 _cell.length_b 94.600 _cell.length_c 42.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VZI _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Paxillin,Paxillin 2305.626 1 ? ? ;PAXILLIN LD4 MOTIF, RESIDUES 262-277 AND 312-315 OF PAXILLIN ISOFORM BETA,PAXILLIN LD4 MOTIF, RESIDUES 262-277 AND 312-315 OF PAXILLIN ISOFORM BETA ; ? 2 polymer man Alpha-parvin 15155.380 1 ? ? 'C-TERMINAL CALPONIN HOMOLOGY DOMAIN, RESIDUES 242-372' ? 3 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 5 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 2 ? ? ? ? 6 water nat water 18.015 39 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Actopaxin,CH-ILKBP,Calponin-like integrin-linked kinase-binding protein,Matrix-remodeling-associated protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ATRELDELMASLSDFKFMAQ ATRELDELMASLSDFKFMAQ A ? 2 'polypeptide(L)' no no ;SGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFE QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE ; ;SGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFE QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 ARG n 1 4 GLU n 1 5 LEU n 1 6 ASP n 1 7 GLU n 1 8 LEU n 1 9 MET n 1 10 ALA n 1 11 SER n 1 12 LEU n 1 13 SER n 1 14 ASP n 1 15 PHE n 1 16 LYS n 1 17 PHE n 1 18 MET n 1 19 ALA n 1 20 GLN n 2 1 SER n 2 2 GLY n 2 3 ARG n 2 4 HIS n 2 5 GLU n 2 6 ARG n 2 7 ASP n 2 8 ALA n 2 9 PHE n 2 10 ASP n 2 11 THR n 2 12 LEU n 2 13 PHE n 2 14 ASP n 2 15 HIS n 2 16 ALA n 2 17 PRO n 2 18 ASP n 2 19 LYS n 2 20 LEU n 2 21 ASN n 2 22 VAL n 2 23 VAL n 2 24 LYS n 2 25 LYS n 2 26 THR n 2 27 LEU n 2 28 ILE n 2 29 THR n 2 30 PHE n 2 31 VAL n 2 32 ASN n 2 33 LYS n 2 34 HIS n 2 35 LEU n 2 36 ASN n 2 37 LYS n 2 38 LEU n 2 39 ASN n 2 40 LEU n 2 41 GLU n 2 42 VAL n 2 43 THR n 2 44 GLU n 2 45 LEU n 2 46 GLU n 2 47 THR n 2 48 GLN n 2 49 PHE n 2 50 ALA n 2 51 ASP n 2 52 GLY n 2 53 VAL n 2 54 TYR n 2 55 LEU n 2 56 VAL n 2 57 LEU n 2 58 LEU n 2 59 MET n 2 60 GLY n 2 61 LEU n 2 62 LEU n 2 63 GLU n 2 64 GLY n 2 65 TYR n 2 66 PHE n 2 67 VAL n 2 68 PRO n 2 69 LEU n 2 70 HIS n 2 71 SER n 2 72 PHE n 2 73 PHE n 2 74 LEU n 2 75 THR n 2 76 PRO n 2 77 ASP n 2 78 SER n 2 79 PHE n 2 80 GLU n 2 81 GLN n 2 82 LYS n 2 83 VAL n 2 84 LEU n 2 85 ASN n 2 86 VAL n 2 87 SER n 2 88 PHE n 2 89 ALA n 2 90 PHE n 2 91 GLU n 2 92 LEU n 2 93 MET n 2 94 GLN n 2 95 ASP n 2 96 GLY n 2 97 GLY n 2 98 LEU n 2 99 GLU n 2 100 LYS n 2 101 PRO n 2 102 LYS n 2 103 PRO n 2 104 ARG n 2 105 PRO n 2 106 GLU n 2 107 ASP n 2 108 ILE n 2 109 VAL n 2 110 ASN n 2 111 CYS n 2 112 ASP n 2 113 LEU n 2 114 LYS n 2 115 SER n 2 116 THR n 2 117 LEU n 2 118 ARG n 2 119 VAL n 2 120 LEU n 2 121 TYR n 2 122 ASN n 2 123 LEU n 2 124 PHE n 2 125 THR n 2 126 LYS n 2 127 TYR n 2 128 ARG n 2 129 ASN n 2 130 VAL n 2 131 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 16 Human ? PXN ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? PGEX-6P1 ? ? 1 2 sample 'Biological sequence' 17 20 Human ? PXN ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? PGEX-6P1 ? ? 2 1 sample 'Biological sequence' 1 131 Human ? 'PARVA, MXRA2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PAXI_HUMAN P49023 ? 1 ATRELDELMASLSDFK 262 2 UNP PAXI_HUMAN P49023 ? 1 FMAQ 312 3 UNP PARVA_HUMAN Q9NVD7 ? 2 ;SGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFE QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE ; 242 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VZI A 1 ? 16 ? P49023 262 ? 277 ? 1 16 2 2 2VZI A 17 ? 20 ? P49023 312 ? 315 ? 17 20 3 3 2VZI B 1 ? 131 ? Q9NVD7 242 ? 372 ? 242 372 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VZI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 45 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 286 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '40%(W/V) PEG 300, 0.1M CITRATE PH 5.2' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2007-09-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(311), SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.976 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VZI _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.72 _reflns.d_resolution_high 2.20 _reflns.number_obs 7929 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.63 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 3.6 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VZI _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 7558 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 58.93 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 369 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.905 _refine.B_iso_mean 31.70 _refine.aniso_B[1][1] 1.41000 _refine.aniso_B[2][2] -0.23000 _refine.aniso_B[3][3] -1.18000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2VZC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.396 _refine.pdbx_overall_ESU_R_Free 0.252 _refine.overall_SU_ML 0.203 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 15.117 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1128 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1208 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 58.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1411 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.139 2.020 ? 1919 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.659 5.000 ? 180 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.610 24.746 ? 59 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.145 15.000 ? 264 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.377 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 217 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1063 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.188 0.200 ? 722 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.298 0.200 ? 977 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 70 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.161 0.200 ? 49 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.111 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.366 1.500 ? 858 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.656 2.000 ? 1393 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.073 3.000 ? 596 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.593 4.500 ? 526 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.26 _refine_ls_shell.number_reflns_R_work 571 _refine_ls_shell.R_factor_R_work 0.2450 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3500 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 22 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VZI _struct.title 'Crystal structure of the C-terminal calponin homology domain of alpha- parvin in complex with paxillin LD4 motif' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VZI _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;CELL ADHESION, CELL MEMBRANE, METAL-BINDING, CALPONIN HOMOLOGY DOMAIN, CYTOSKELETON, CELL JUNCTION, ACTIN-BINDING, MEMBRANE, LD2 MOTIF, LIM DOMAIN, PHOSPHOPROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 4 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 1 ? SER A 13 ? ALA A 1 SER A 13 1 ? 13 HELX_P HELX_P2 2 ASP B 7 ? ALA B 16 ? ASP B 248 ALA B 257 1 ? 10 HELX_P HELX_P3 3 LYS B 19 ? ASN B 36 ? LYS B 260 ASN B 277 1 ? 18 HELX_P HELX_P4 4 LYS B 37 ? ASN B 39 ? LYS B 278 ASN B 280 5 ? 3 HELX_P HELX_P5 5 GLY B 52 ? GLY B 64 ? GLY B 293 GLY B 305 1 ? 13 HELX_P HELX_P6 6 PRO B 68 ? PHE B 72 ? PRO B 309 PHE B 313 5 ? 5 HELX_P HELX_P7 7 SER B 78 ? GLY B 96 ? SER B 319 GLY B 337 1 ? 19 HELX_P HELX_P8 8 ARG B 104 ? ASN B 110 ? ARG B 345 ASN B 351 1 ? 7 HELX_P HELX_P9 9 ASP B 112 ? TYR B 127 ? ASP B 353 TYR B 368 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B PG4 1373 ? 7 'BINDING SITE FOR RESIDUE PG4 B 1373' AC2 Software B PGE 1377 ? 4 'BINDING SITE FOR RESIDUE PGE B 1377' AC3 Software B EDO 1374 ? 7 'BINDING SITE FOR RESIDUE EDO B 1374' AC4 Software B PGE 1375 ? 6 'BINDING SITE FOR RESIDUE PGE B 1375' AC5 Software B EDO 1376 ? 7 'BINDING SITE FOR RESIDUE EDO B 1376' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASN B 21 ? ASN B 262 . ? 4_555 ? 2 AC1 7 ALA B 50 ? ALA B 291 . ? 1_555 ? 3 AC1 7 ASP B 77 ? ASP B 318 . ? 1_555 ? 4 AC1 7 SER B 78 ? SER B 319 . ? 1_555 ? 5 AC1 7 PHE B 79 ? PHE B 320 . ? 1_555 ? 6 AC1 7 LYS B 82 ? LYS B 323 . ? 1_555 ? 7 AC1 7 VAL B 109 ? VAL B 350 . ? 1_555 ? 8 AC2 4 ASP B 95 ? ASP B 336 . ? 1_555 ? 9 AC2 4 TYR B 121 ? TYR B 362 . ? 6_545 ? 10 AC2 4 ASN B 122 ? ASN B 363 . ? 6_545 ? 11 AC2 4 THR B 125 ? THR B 366 . ? 6_545 ? 12 AC3 7 PHE B 30 ? PHE B 271 . ? 1_555 ? 13 AC3 7 LYS B 33 ? LYS B 274 . ? 1_555 ? 14 AC3 7 HIS B 34 ? HIS B 275 . ? 1_555 ? 15 AC3 7 TYR B 127 ? TYR B 368 . ? 1_555 ? 16 AC3 7 ARG B 128 ? ARG B 369 . ? 1_555 ? 17 AC3 7 VAL B 130 ? VAL B 371 . ? 1_555 ? 18 AC3 7 HOH H . ? HOH B 2037 . ? 1_555 ? 19 AC4 6 GLN B 48 ? GLN B 289 . ? 1_555 ? 20 AC4 6 ASP B 51 ? ASP B 292 . ? 1_555 ? 21 AC4 6 VAL B 53 ? VAL B 294 . ? 1_555 ? 22 AC4 6 TYR B 54 ? TYR B 295 . ? 1_555 ? 23 AC4 6 LEU B 74 ? LEU B 315 . ? 1_555 ? 24 AC4 6 THR B 75 ? THR B 316 . ? 3_555 ? 25 AC5 7 MET B 93 ? MET B 334 . ? 1_555 ? 26 AC5 7 PRO B 101 ? PRO B 342 . ? 1_555 ? 27 AC5 7 VAL B 119 ? VAL B 360 . ? 1_555 ? 28 AC5 7 ASN B 122 ? ASN B 363 . ? 1_555 ? 29 AC5 7 LEU B 123 ? LEU B 364 . ? 1_555 ? 30 AC5 7 HOH H . ? HOH B 2038 . ? 1_555 ? 31 AC5 7 HOH H . ? HOH B 2039 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VZI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VZI _atom_sites.fract_transf_matrix[1][1] 0.013259 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010571 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023714 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ASP 14 14 ? ? ? A . n A 1 15 PHE 15 15 ? ? ? A . n A 1 16 LYS 16 16 ? ? ? A . n A 1 17 PHE 17 17 ? ? ? A . n A 1 18 MET 18 18 ? ? ? A . n A 1 19 ALA 19 19 ? ? ? A . n A 1 20 GLN 20 20 ? ? ? A . n B 2 1 SER 1 242 ? ? ? B . n B 2 2 GLY 2 243 ? ? ? B . n B 2 3 ARG 3 244 ? ? ? B . n B 2 4 HIS 4 245 ? ? ? B . n B 2 5 GLU 5 246 ? ? ? B . n B 2 6 ARG 6 247 247 ARG ARG B . n B 2 7 ASP 7 248 248 ASP ASP B . n B 2 8 ALA 8 249 249 ALA ALA B . n B 2 9 PHE 9 250 250 PHE PHE B . n B 2 10 ASP 10 251 251 ASP ASP B . n B 2 11 THR 11 252 252 THR THR B . n B 2 12 LEU 12 253 253 LEU LEU B . n B 2 13 PHE 13 254 254 PHE PHE B . n B 2 14 ASP 14 255 255 ASP ASP B . n B 2 15 HIS 15 256 256 HIS HIS B . n B 2 16 ALA 16 257 257 ALA ALA B . n B 2 17 PRO 17 258 258 PRO PRO B . n B 2 18 ASP 18 259 259 ASP ASP B . n B 2 19 LYS 19 260 260 LYS LYS B . n B 2 20 LEU 20 261 261 LEU LEU B . n B 2 21 ASN 21 262 262 ASN ASN B . n B 2 22 VAL 22 263 263 VAL VAL B . n B 2 23 VAL 23 264 264 VAL VAL B . n B 2 24 LYS 24 265 265 LYS LYS B . n B 2 25 LYS 25 266 266 LYS LYS B . n B 2 26 THR 26 267 267 THR THR B . n B 2 27 LEU 27 268 268 LEU LEU B . n B 2 28 ILE 28 269 269 ILE ILE B . n B 2 29 THR 29 270 270 THR THR B . n B 2 30 PHE 30 271 271 PHE PHE B . n B 2 31 VAL 31 272 272 VAL VAL B . n B 2 32 ASN 32 273 273 ASN ASN B . n B 2 33 LYS 33 274 274 LYS LYS B . n B 2 34 HIS 34 275 275 HIS HIS B . n B 2 35 LEU 35 276 276 LEU LEU B . n B 2 36 ASN 36 277 277 ASN ASN B . n B 2 37 LYS 37 278 278 LYS LYS B . n B 2 38 LEU 38 279 279 LEU LEU B . n B 2 39 ASN 39 280 280 ASN ASN B . n B 2 40 LEU 40 281 281 LEU LEU B . n B 2 41 GLU 41 282 282 GLU GLU B . n B 2 42 VAL 42 283 283 VAL VAL B . n B 2 43 THR 43 284 284 THR THR B . n B 2 44 GLU 44 285 285 GLU GLU B . n B 2 45 LEU 45 286 286 LEU LEU B . n B 2 46 GLU 46 287 287 GLU GLU B . n B 2 47 THR 47 288 288 THR THR B . n B 2 48 GLN 48 289 289 GLN GLN B . n B 2 49 PHE 49 290 290 PHE PHE B . n B 2 50 ALA 50 291 291 ALA ALA B . n B 2 51 ASP 51 292 292 ASP ASP B . n B 2 52 GLY 52 293 293 GLY GLY B . n B 2 53 VAL 53 294 294 VAL VAL B . n B 2 54 TYR 54 295 295 TYR TYR B . n B 2 55 LEU 55 296 296 LEU LEU B . n B 2 56 VAL 56 297 297 VAL VAL B . n B 2 57 LEU 57 298 298 LEU LEU B . n B 2 58 LEU 58 299 299 LEU LEU B . n B 2 59 MET 59 300 300 MET MET B . n B 2 60 GLY 60 301 301 GLY GLY B . n B 2 61 LEU 61 302 302 LEU LEU B . n B 2 62 LEU 62 303 303 LEU LEU B . n B 2 63 GLU 63 304 304 GLU GLU B . n B 2 64 GLY 64 305 305 GLY GLY B . n B 2 65 TYR 65 306 306 TYR TYR B . n B 2 66 PHE 66 307 307 PHE PHE B . n B 2 67 VAL 67 308 308 VAL VAL B . n B 2 68 PRO 68 309 309 PRO PRO B . n B 2 69 LEU 69 310 310 LEU LEU B . n B 2 70 HIS 70 311 311 HIS HIS B . n B 2 71 SER 71 312 312 SER SER B . n B 2 72 PHE 72 313 313 PHE PHE B . n B 2 73 PHE 73 314 314 PHE PHE B . n B 2 74 LEU 74 315 315 LEU LEU B . n B 2 75 THR 75 316 316 THR THR B . n B 2 76 PRO 76 317 317 PRO PRO B . n B 2 77 ASP 77 318 318 ASP ASP B . n B 2 78 SER 78 319 319 SER SER B . n B 2 79 PHE 79 320 320 PHE PHE B . n B 2 80 GLU 80 321 321 GLU GLU B . n B 2 81 GLN 81 322 322 GLN GLN B . n B 2 82 LYS 82 323 323 LYS LYS B . n B 2 83 VAL 83 324 324 VAL VAL B . n B 2 84 LEU 84 325 325 LEU LEU B . n B 2 85 ASN 85 326 326 ASN ASN B . n B 2 86 VAL 86 327 327 VAL VAL B . n B 2 87 SER 87 328 328 SER SER B . n B 2 88 PHE 88 329 329 PHE PHE B . n B 2 89 ALA 89 330 330 ALA ALA B . n B 2 90 PHE 90 331 331 PHE PHE B . n B 2 91 GLU 91 332 332 GLU GLU B . n B 2 92 LEU 92 333 333 LEU LEU B . n B 2 93 MET 93 334 334 MET MET B . n B 2 94 GLN 94 335 335 GLN GLN B . n B 2 95 ASP 95 336 336 ASP ASP B . n B 2 96 GLY 96 337 337 GLY GLY B . n B 2 97 GLY 97 338 338 GLY GLY B . n B 2 98 LEU 98 339 339 LEU LEU B . n B 2 99 GLU 99 340 340 GLU GLU B . n B 2 100 LYS 100 341 341 LYS LYS B . n B 2 101 PRO 101 342 342 PRO PRO B . n B 2 102 LYS 102 343 343 LYS LYS B . n B 2 103 PRO 103 344 344 PRO PRO B . n B 2 104 ARG 104 345 345 ARG ARG B . n B 2 105 PRO 105 346 346 PRO PRO B . n B 2 106 GLU 106 347 347 GLU GLU B . n B 2 107 ASP 107 348 348 ASP ASP B . n B 2 108 ILE 108 349 349 ILE ILE B . n B 2 109 VAL 109 350 350 VAL VAL B . n B 2 110 ASN 110 351 351 ASN ASN B . n B 2 111 CYS 111 352 352 CYS CYS B . n B 2 112 ASP 112 353 353 ASP ASP B . n B 2 113 LEU 113 354 354 LEU LEU B . n B 2 114 LYS 114 355 355 LYS LYS B . n B 2 115 SER 115 356 356 SER SER B . n B 2 116 THR 116 357 357 THR THR B . n B 2 117 LEU 117 358 358 LEU LEU B . n B 2 118 ARG 118 359 359 ARG ARG B . n B 2 119 VAL 119 360 360 VAL VAL B . n B 2 120 LEU 120 361 361 LEU LEU B . n B 2 121 TYR 121 362 362 TYR TYR B . n B 2 122 ASN 122 363 363 ASN ASN B . n B 2 123 LEU 123 364 364 LEU LEU B . n B 2 124 PHE 124 365 365 PHE PHE B . n B 2 125 THR 125 366 366 THR THR B . n B 2 126 LYS 126 367 367 LYS LYS B . n B 2 127 TYR 127 368 368 TYR TYR B . n B 2 128 ARG 128 369 369 ARG ARG B . n B 2 129 ASN 129 370 370 ASN ASN B . n B 2 130 VAL 130 371 371 VAL VAL B . n B 2 131 GLU 131 372 372 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PG4 1 1373 1373 PG4 PG4 B . D 4 EDO 1 1374 1374 EDO EDO B . E 5 PGE 1 1375 1375 PGE PGE B . F 4 EDO 1 1376 1376 EDO EDO B . G 5 PGE 1 1377 1377 PGE PGE B . H 6 HOH 1 2001 2001 HOH HOH B . H 6 HOH 2 2002 2002 HOH HOH B . H 6 HOH 3 2003 2003 HOH HOH B . H 6 HOH 4 2004 2004 HOH HOH B . H 6 HOH 5 2005 2005 HOH HOH B . H 6 HOH 6 2006 2006 HOH HOH B . H 6 HOH 7 2007 2007 HOH HOH B . H 6 HOH 8 2008 2008 HOH HOH B . H 6 HOH 9 2009 2009 HOH HOH B . H 6 HOH 10 2010 2010 HOH HOH B . H 6 HOH 11 2011 2011 HOH HOH B . H 6 HOH 12 2012 2012 HOH HOH B . H 6 HOH 13 2013 2013 HOH HOH B . H 6 HOH 14 2014 2014 HOH HOH B . H 6 HOH 15 2015 2015 HOH HOH B . H 6 HOH 16 2016 2016 HOH HOH B . H 6 HOH 17 2017 2017 HOH HOH B . H 6 HOH 18 2018 2018 HOH HOH B . H 6 HOH 19 2019 2019 HOH HOH B . H 6 HOH 20 2020 2020 HOH HOH B . H 6 HOH 21 2021 2021 HOH HOH B . H 6 HOH 22 2022 2022 HOH HOH B . H 6 HOH 23 2023 2023 HOH HOH B . H 6 HOH 24 2024 2024 HOH HOH B . H 6 HOH 25 2025 2025 HOH HOH B . H 6 HOH 26 2026 2026 HOH HOH B . H 6 HOH 27 2027 2027 HOH HOH B . H 6 HOH 28 2028 2028 HOH HOH B . H 6 HOH 29 2029 2029 HOH HOH B . H 6 HOH 30 2030 2030 HOH HOH B . H 6 HOH 31 2031 2031 HOH HOH B . H 6 HOH 32 2032 2032 HOH HOH B . H 6 HOH 33 2033 2033 HOH HOH B . H 6 HOH 34 2034 2034 HOH HOH B . H 6 HOH 35 2035 2035 HOH HOH B . H 6 HOH 36 2036 2036 HOH HOH B . H 6 HOH 37 2037 2037 HOH HOH B . H 6 HOH 38 2038 2038 HOH HOH B . H 6 HOH 39 2039 2039 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1160 ? 1 MORE -12.9 ? 1 'SSA (A^2)' 9550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-05-30 4 'Structure model' 1 3 2019-04-24 5 'Structure model' 1 4 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Other 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Experimental preparation' 7 4 'Structure model' Other 8 4 'Structure model' 'Source and taxonomy' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Derived calculations' 13 5 'Structure model' Other 14 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' entity_src_gen 6 4 'Structure model' exptl_crystal_grow 7 4 'Structure model' pdbx_database_proc 8 4 'Structure model' pdbx_database_status 9 4 'Structure model' pdbx_entity_src_syn 10 4 'Structure model' struct_biol 11 4 'Structure model' struct_ref 12 4 'Structure model' struct_ref_seq 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond 15 5 'Structure model' database_2 16 5 'Structure model' pdbx_database_status 17 5 'Structure model' pdbx_initial_refinement_model 18 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.page_last' 2 4 'Structure model' '_citation.pdbx_database_id_DOI' 3 4 'Structure model' '_citation.title' 4 4 'Structure model' '_citation_author.name' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_entity.pdbx_fragment' 7 4 'Structure model' '_entity.src_method' 8 4 'Structure model' '_entity_name_com.name' 9 4 'Structure model' '_exptl_crystal_grow.method' 10 4 'Structure model' '_exptl_crystal_grow.temp' 11 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 12 4 'Structure model' '_struct_ref_seq.ref_id' 13 5 'Structure model' '_database_2.pdbx_DOI' 14 5 'Structure model' '_database_2.pdbx_database_accession' 15 5 'Structure model' '_pdbx_database_status.status_code_sf' 16 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 12.7620 -13.5570 0.5910 -0.1856 -0.1830 -0.1916 0.0200 -0.0052 0.0055 2.8449 2.9152 4.0816 -0.6744 -0.2849 0.3094 0.0378 0.2252 -0.0782 0.0540 -0.1091 -0.0250 -0.1666 -0.0229 0.0714 'X-RAY DIFFRACTION' 2 ? refined 18.6920 -12.8100 -17.5570 0.1477 0.1657 -0.1252 0.2406 0.1033 0.0807 17.5981 24.6280 9.7863 -6.1078 0.4524 0.5423 0.2045 -0.5549 -0.2725 -1.5900 -0.4823 -0.5034 -0.2463 0.3778 0.2777 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 B 247 ? ? B 372 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 7 ? ? A 13 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.2.0019 ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2VZI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;LD4 MOTIF OF PAXILLIN ISOFORM BETA (EXCLUDING RESIDUES 278-311 OF UNIPROT ENTRY P49023 PROTEIN SEQUENCE) ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 14 ? A ASP 14 2 1 Y 1 A PHE 15 ? A PHE 15 3 1 Y 1 A LYS 16 ? A LYS 16 4 1 Y 1 A PHE 17 ? A PHE 17 5 1 Y 1 A MET 18 ? A MET 18 6 1 Y 1 A ALA 19 ? A ALA 19 7 1 Y 1 A GLN 20 ? A GLN 20 8 1 Y 1 B SER 242 ? B SER 1 9 1 Y 1 B GLY 243 ? B GLY 2 10 1 Y 1 B ARG 244 ? B ARG 3 11 1 Y 1 B HIS 245 ? B HIS 4 12 1 Y 1 B GLU 246 ? B GLU 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PG4 O1 O N N 260 PG4 C1 C N N 261 PG4 C2 C N N 262 PG4 O2 O N N 263 PG4 C3 C N N 264 PG4 C4 C N N 265 PG4 O3 O N N 266 PG4 C5 C N N 267 PG4 C6 C N N 268 PG4 O4 O N N 269 PG4 C7 C N N 270 PG4 C8 C N N 271 PG4 O5 O N N 272 PG4 HO1 H N N 273 PG4 H11 H N N 274 PG4 H12 H N N 275 PG4 H21 H N N 276 PG4 H22 H N N 277 PG4 H31 H N N 278 PG4 H32 H N N 279 PG4 H41 H N N 280 PG4 H42 H N N 281 PG4 H51 H N N 282 PG4 H52 H N N 283 PG4 H61 H N N 284 PG4 H62 H N N 285 PG4 H71 H N N 286 PG4 H72 H N N 287 PG4 H81 H N N 288 PG4 H82 H N N 289 PG4 HO5 H N N 290 PGE C1 C N N 291 PGE O1 O N N 292 PGE C2 C N N 293 PGE O2 O N N 294 PGE C3 C N N 295 PGE C4 C N N 296 PGE O4 O N N 297 PGE C6 C N N 298 PGE C5 C N N 299 PGE O3 O N N 300 PGE H1 H N N 301 PGE H12 H N N 302 PGE HO1 H N N 303 PGE H2 H N N 304 PGE H22 H N N 305 PGE H3 H N N 306 PGE H32 H N N 307 PGE H4 H N N 308 PGE H42 H N N 309 PGE HO4 H N N 310 PGE H6 H N N 311 PGE H62 H N N 312 PGE H5 H N N 313 PGE H52 H N N 314 PHE N N N N 315 PHE CA C N S 316 PHE C C N N 317 PHE O O N N 318 PHE CB C N N 319 PHE CG C Y N 320 PHE CD1 C Y N 321 PHE CD2 C Y N 322 PHE CE1 C Y N 323 PHE CE2 C Y N 324 PHE CZ C Y N 325 PHE OXT O N N 326 PHE H H N N 327 PHE H2 H N N 328 PHE HA H N N 329 PHE HB2 H N N 330 PHE HB3 H N N 331 PHE HD1 H N N 332 PHE HD2 H N N 333 PHE HE1 H N N 334 PHE HE2 H N N 335 PHE HZ H N N 336 PHE HXT H N N 337 PRO N N N N 338 PRO CA C N S 339 PRO C C N N 340 PRO O O N N 341 PRO CB C N N 342 PRO CG C N N 343 PRO CD C N N 344 PRO OXT O N N 345 PRO H H N N 346 PRO HA H N N 347 PRO HB2 H N N 348 PRO HB3 H N N 349 PRO HG2 H N N 350 PRO HG3 H N N 351 PRO HD2 H N N 352 PRO HD3 H N N 353 PRO HXT H N N 354 SER N N N N 355 SER CA C N S 356 SER C C N N 357 SER O O N N 358 SER CB C N N 359 SER OG O N N 360 SER OXT O N N 361 SER H H N N 362 SER H2 H N N 363 SER HA H N N 364 SER HB2 H N N 365 SER HB3 H N N 366 SER HG H N N 367 SER HXT H N N 368 THR N N N N 369 THR CA C N S 370 THR C C N N 371 THR O O N N 372 THR CB C N R 373 THR OG1 O N N 374 THR CG2 C N N 375 THR OXT O N N 376 THR H H N N 377 THR H2 H N N 378 THR HA H N N 379 THR HB H N N 380 THR HG1 H N N 381 THR HG21 H N N 382 THR HG22 H N N 383 THR HG23 H N N 384 THR HXT H N N 385 TYR N N N N 386 TYR CA C N S 387 TYR C C N N 388 TYR O O N N 389 TYR CB C N N 390 TYR CG C Y N 391 TYR CD1 C Y N 392 TYR CD2 C Y N 393 TYR CE1 C Y N 394 TYR CE2 C Y N 395 TYR CZ C Y N 396 TYR OH O N N 397 TYR OXT O N N 398 TYR H H N N 399 TYR H2 H N N 400 TYR HA H N N 401 TYR HB2 H N N 402 TYR HB3 H N N 403 TYR HD1 H N N 404 TYR HD2 H N N 405 TYR HE1 H N N 406 TYR HE2 H N N 407 TYR HH H N N 408 TYR HXT H N N 409 VAL N N N N 410 VAL CA C N S 411 VAL C C N N 412 VAL O O N N 413 VAL CB C N N 414 VAL CG1 C N N 415 VAL CG2 C N N 416 VAL OXT O N N 417 VAL H H N N 418 VAL H2 H N N 419 VAL HA H N N 420 VAL HB H N N 421 VAL HG11 H N N 422 VAL HG12 H N N 423 VAL HG13 H N N 424 VAL HG21 H N N 425 VAL HG22 H N N 426 VAL HG23 H N N 427 VAL HXT H N N 428 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PG4 O1 C1 sing N N 246 PG4 O1 HO1 sing N N 247 PG4 C1 C2 sing N N 248 PG4 C1 H11 sing N N 249 PG4 C1 H12 sing N N 250 PG4 C2 O2 sing N N 251 PG4 C2 H21 sing N N 252 PG4 C2 H22 sing N N 253 PG4 O2 C3 sing N N 254 PG4 C3 C4 sing N N 255 PG4 C3 H31 sing N N 256 PG4 C3 H32 sing N N 257 PG4 C4 O3 sing N N 258 PG4 C4 H41 sing N N 259 PG4 C4 H42 sing N N 260 PG4 O3 C5 sing N N 261 PG4 C5 C6 sing N N 262 PG4 C5 H51 sing N N 263 PG4 C5 H52 sing N N 264 PG4 C6 O4 sing N N 265 PG4 C6 H61 sing N N 266 PG4 C6 H62 sing N N 267 PG4 O4 C7 sing N N 268 PG4 C7 C8 sing N N 269 PG4 C7 H71 sing N N 270 PG4 C7 H72 sing N N 271 PG4 C8 O5 sing N N 272 PG4 C8 H81 sing N N 273 PG4 C8 H82 sing N N 274 PG4 O5 HO5 sing N N 275 PGE C1 O1 sing N N 276 PGE C1 C2 sing N N 277 PGE C1 H1 sing N N 278 PGE C1 H12 sing N N 279 PGE O1 HO1 sing N N 280 PGE C2 O2 sing N N 281 PGE C2 H2 sing N N 282 PGE C2 H22 sing N N 283 PGE O2 C3 sing N N 284 PGE C3 C4 sing N N 285 PGE C3 H3 sing N N 286 PGE C3 H32 sing N N 287 PGE C4 O3 sing N N 288 PGE C4 H4 sing N N 289 PGE C4 H42 sing N N 290 PGE O4 C6 sing N N 291 PGE O4 HO4 sing N N 292 PGE C6 C5 sing N N 293 PGE C6 H6 sing N N 294 PGE C6 H62 sing N N 295 PGE C5 O3 sing N N 296 PGE C5 H5 sing N N 297 PGE C5 H52 sing N N 298 PHE N CA sing N N 299 PHE N H sing N N 300 PHE N H2 sing N N 301 PHE CA C sing N N 302 PHE CA CB sing N N 303 PHE CA HA sing N N 304 PHE C O doub N N 305 PHE C OXT sing N N 306 PHE CB CG sing N N 307 PHE CB HB2 sing N N 308 PHE CB HB3 sing N N 309 PHE CG CD1 doub Y N 310 PHE CG CD2 sing Y N 311 PHE CD1 CE1 sing Y N 312 PHE CD1 HD1 sing N N 313 PHE CD2 CE2 doub Y N 314 PHE CD2 HD2 sing N N 315 PHE CE1 CZ doub Y N 316 PHE CE1 HE1 sing N N 317 PHE CE2 CZ sing Y N 318 PHE CE2 HE2 sing N N 319 PHE CZ HZ sing N N 320 PHE OXT HXT sing N N 321 PRO N CA sing N N 322 PRO N CD sing N N 323 PRO N H sing N N 324 PRO CA C sing N N 325 PRO CA CB sing N N 326 PRO CA HA sing N N 327 PRO C O doub N N 328 PRO C OXT sing N N 329 PRO CB CG sing N N 330 PRO CB HB2 sing N N 331 PRO CB HB3 sing N N 332 PRO CG CD sing N N 333 PRO CG HG2 sing N N 334 PRO CG HG3 sing N N 335 PRO CD HD2 sing N N 336 PRO CD HD3 sing N N 337 PRO OXT HXT sing N N 338 SER N CA sing N N 339 SER N H sing N N 340 SER N H2 sing N N 341 SER CA C sing N N 342 SER CA CB sing N N 343 SER CA HA sing N N 344 SER C O doub N N 345 SER C OXT sing N N 346 SER CB OG sing N N 347 SER CB HB2 sing N N 348 SER CB HB3 sing N N 349 SER OG HG sing N N 350 SER OXT HXT sing N N 351 THR N CA sing N N 352 THR N H sing N N 353 THR N H2 sing N N 354 THR CA C sing N N 355 THR CA CB sing N N 356 THR CA HA sing N N 357 THR C O doub N N 358 THR C OXT sing N N 359 THR CB OG1 sing N N 360 THR CB CG2 sing N N 361 THR CB HB sing N N 362 THR OG1 HG1 sing N N 363 THR CG2 HG21 sing N N 364 THR CG2 HG22 sing N N 365 THR CG2 HG23 sing N N 366 THR OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'TETRAETHYLENE GLYCOL' PG4 4 1,2-ETHANEDIOL EDO 5 'TRIETHYLENE GLYCOL' PGE 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VZC _pdbx_initial_refinement_model.details 'PDB ENTRY 2VZC' #