HEADER ALLERGEN 05-AUG-08 2VZN TITLE CRYSTAL STRUCTURE OF THE MAJOR ALLERGEN FROM FIRE ANT VENOM, SOL I 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VENOM ALLERGEN 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: VENOM ALLERGEN III, ALLERGEN SOL I III, VENOM ALLERGEN SOLI COMPND 5 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLENOPSIS INVICTA; SOURCE 3 ORGANISM_COMMON: RED FIRE ANT; SOURCE 4 ORGANISM_TAXID: 13686; SOURCE 5 TISSUE: VENOM GLAND; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS MAJOR FIRE ANT ALLERGEN, SOL I 3, SECRETED, ALLERGEN, CROSS- KEYWDS 2 REACTIVITY EXPDTA X-RAY DIFFRACTION AUTHOR S.PADAVATTAN,Z.MARKOVIC-HOUSLEY REVDAT 6 13-DEC-23 2VZN 1 REMARK REVDAT 5 15-MAY-19 2VZN 1 REMARK REVDAT 4 13-JUL-11 2VZN 1 VERSN REVDAT 3 24-FEB-09 2VZN 1 VERSN REVDAT 2 30-SEP-08 2VZN 1 JRNL REVDAT 1 09-SEP-08 2VZN 0 JRNL AUTH S.PADAVATTAN,M.SCHMIDT,D.R.HOFFMAN,Z.MARKOVIC-HOUSLEY JRNL TITL CRYSTAL STRUCTURE OF THE MAJOR ALLERGEN FROM FIRE ANT VENOM, JRNL TITL 2 SOL I 3 JRNL REF J.MOL.BIOL. V. 383 178 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18761353 JRNL DOI 10.1016/J.JMB.2008.08.023 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 13061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 652 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 893 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3320 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3219 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.16300 REMARK 3 B22 (A**2) : 0.16300 REMARK 3 B33 (A**2) : -0.24500 REMARK 3 B12 (A**2) : 0.08200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.000 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.383 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.310 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.351 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3314 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4528 ; 1.016 ; 1.906 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 412 ; 6.196 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;36.234 ;24.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 470 ;16.365 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;22.279 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 485 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3762 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 769 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1669 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 88 ; 0.115 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.247 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.115 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2128 ; 0.692 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3348 ; 1.029 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1371 ; 1.559 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1180 ; 2.311 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 13 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 6 1 REMARK 3 1 B 3 B 6 1 REMARK 3 2 A 15 A 28 1 REMARK 3 2 B 15 B 28 1 REMARK 3 3 A 33 A 62 1 REMARK 3 3 B 33 B 62 1 REMARK 3 4 A 63 A 70 1 REMARK 3 4 B 63 B 70 1 REMARK 3 5 A 71 A 73 1 REMARK 3 5 B 71 B 73 1 REMARK 3 6 A 76 A 99 1 REMARK 3 6 B 76 B 99 1 REMARK 3 7 A 101 A 119 1 REMARK 3 7 B 101 B 119 1 REMARK 3 8 A 126 A 143 1 REMARK 3 8 B 126 B 143 1 REMARK 3 9 A 144 A 156 1 REMARK 3 9 B 144 B 156 1 REMARK 3 10 A 158 A 160 1 REMARK 3 10 B 158 B 160 1 REMARK 3 11 A 161 A 181 1 REMARK 3 11 B 161 B 181 1 REMARK 3 12 A 188 A 192 1 REMARK 3 12 B 188 B 192 1 REMARK 3 13 A 194 A 210 1 REMARK 3 13 B 194 B 210 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2233 ; 0.04 ; 0.05 REMARK 3 TIGHT THERMAL 1 B (A**2): 2233 ; 0.09 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 39.2660 2.4540 8.2220 REMARK 3 T TENSOR REMARK 3 T11: -0.1405 T22: -0.3110 REMARK 3 T33: -0.0511 T12: -0.0125 REMARK 3 T13: 0.0792 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.3154 L22: 6.8830 REMARK 3 L33: 6.9935 L12: 1.3440 REMARK 3 L13: 0.7269 L23: -2.4207 REMARK 3 S TENSOR REMARK 3 S11: -0.1462 S12: 0.0023 S13: 0.2648 REMARK 3 S21: -0.6970 S22: 0.2201 S23: -0.2057 REMARK 3 S31: 0.5442 S32: 0.0252 S33: -0.0739 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 36.1630 -15.6730 31.2580 REMARK 3 T TENSOR REMARK 3 T11: -0.0956 T22: -0.0963 REMARK 3 T33: -0.0328 T12: 0.0567 REMARK 3 T13: -0.1074 T23: 0.0822 REMARK 3 L TENSOR REMARK 3 L11: 4.1450 L22: 9.3243 REMARK 3 L33: 2.9085 L12: -3.0863 REMARK 3 L13: -1.2817 L23: 0.6579 REMARK 3 S TENSOR REMARK 3 S11: 0.1743 S12: -0.3182 S13: -0.5142 REMARK 3 S21: 0.3472 S22: -0.1550 S23: 0.4036 REMARK 3 S31: -0.0798 S32: -0.0496 S33: -0.0194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. DISORDERED REGIONS WERE MODELED STEREOCHEMICALLY AND REMARK 3 HAVE OCCUPANCY OF ZERO REMARK 4 REMARK 4 2VZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1290036873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13121 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.040 REMARK 200 RESOLUTION RANGE LOW (A) : 80.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 2.680 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.52 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.370 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1QNX REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE HANGING-DROP VAPOR WATER (9.9 REMARK 280 MG/ML) WAS MIXED WITH RESERVOIR SOLUTION (19% (W/V) POLYETHYLENE REMARK 280 GLYCOL (PEG) 1000, 100 MM TRIS-HCL, PH 8.5) AT A RATIO OF 1:1., REMARK 280 VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.01700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.03400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.02550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 120.04250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.00850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 LYS A 123 REMARK 465 THR B 1 REMARK 465 ASN B 5 REMARK 465 LEU B 6 REMARK 465 CYS B 9 REMARK 465 LYS B 10 REMARK 465 ARG B 11 REMARK 465 ASN B 12 REMARK 465 ASN B 13 REMARK 465 GLY B 122 REMARK 465 LYS B 123 REMARK 465 ASN B 124 REMARK 465 PRO B 184 REMARK 465 HIS B 217 REMARK 465 HIS B 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 LYS A 49 CE NZ REMARK 470 GLN A 55 CG CD OE1 NE2 REMARK 470 LYS A 61 NZ REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 LYS A 159 CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 GLN B 55 CG CD OE1 NE2 REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 PHE B 98 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 99 CB CG CD OE1 OE2 REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 SER B 152 OG REMARK 470 ASN B 155 CG OD1 ND2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 LYS B 173 CG CD CE NZ REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 GLU B 183 CA C O CB CG CD OE1 REMARK 470 GLU B 183 OE2 REMARK 470 LYS B 189 CD CE NZ REMARK 470 LEU B 203 CG CD1 CD2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 LYS B 211 CD CE NZ REMARK 470 LYS B 212 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 32 67.90 34.60 REMARK 500 MET A 76 85.85 -152.62 REMARK 500 ASN A 94 0.63 -67.35 REMARK 500 LYS A 125 63.42 -118.95 REMARK 500 ASN A 186 -3.83 69.43 REMARK 500 LEU A 203 97.91 -54.92 REMARK 500 LEU B 31 -138.34 33.97 REMARK 500 MET B 76 87.91 -156.71 REMARK 500 SER B 120 -159.50 -104.12 REMARK 500 LEU B 203 97.54 -53.85 REMARK 500 HIS B 213 -165.91 -75.56 REMARK 500 HIS B 214 -100.02 -163.41 REMARK 500 HIS B 215 55.56 -112.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. DBREF 2VZN A 1 212 UNP P35778 VA3_SOLIN 23 234 DBREF 2VZN A 213 218 PDB 2VZN 2VZN 213 218 DBREF 2VZN B 1 212 UNP P35778 VA3_SOLIN 23 234 DBREF 2VZN B 213 218 PDB 2VZN 2VZN 213 218 SEQRES 1 A 218 THR ASN TYR CYS ASN LEU GLN SER CYS LYS ARG ASN ASN SEQRES 2 A 218 ALA ILE HIS THR MET CYS GLN TYR THR SER PRO THR PRO SEQRES 3 A 218 GLY PRO MET CYS LEU GLU TYR SER ASN VAL GLY PHE THR SEQRES 4 A 218 ASP ALA GLU LYS ASP ALA ILE VAL ASN LYS HIS ASN GLU SEQRES 5 A 218 LEU ARG GLN ARG VAL ALA SER GLY LYS GLU MET ARG GLY SEQRES 6 A 218 THR ASN GLY PRO GLN PRO PRO ALA VAL LYS MET PRO ASN SEQRES 7 A 218 LEU THR TRP ASP PRO GLU LEU ALA THR ILE ALA GLN ARG SEQRES 8 A 218 TRP ALA ASN GLN CYS THR PHE GLU HIS ASP ALA CYS ARG SEQRES 9 A 218 ASN VAL GLU ARG PHE ALA VAL GLY GLN ASN ILE ALA ALA SEQRES 10 A 218 THR SER SER SER GLY LYS ASN LYS SER THR PRO ASN GLU SEQRES 11 A 218 MET ILE LEU LEU TRP TYR ASN GLU VAL LYS ASP PHE ASP SEQRES 12 A 218 ASN ARG TRP ILE SER SER PHE PRO SER ASP ASP ASN ILE SEQRES 13 A 218 LEU MET LYS VAL GLY HIS TYR THR GLN ILE VAL TRP ALA SEQRES 14 A 218 LYS THR THR LYS ILE GLY CYS GLY ARG ILE MET PHE LYS SEQRES 15 A 218 GLU PRO ASP ASN TRP THR LYS HIS TYR LEU VAL CYS ASN SEQRES 16 A 218 TYR GLY PRO ALA GLY ASN VAL LEU GLY ALA PRO ILE TYR SEQRES 17 A 218 GLU ILE LYS LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 218 THR ASN TYR CYS ASN LEU GLN SER CYS LYS ARG ASN ASN SEQRES 2 B 218 ALA ILE HIS THR MET CYS GLN TYR THR SER PRO THR PRO SEQRES 3 B 218 GLY PRO MET CYS LEU GLU TYR SER ASN VAL GLY PHE THR SEQRES 4 B 218 ASP ALA GLU LYS ASP ALA ILE VAL ASN LYS HIS ASN GLU SEQRES 5 B 218 LEU ARG GLN ARG VAL ALA SER GLY LYS GLU MET ARG GLY SEQRES 6 B 218 THR ASN GLY PRO GLN PRO PRO ALA VAL LYS MET PRO ASN SEQRES 7 B 218 LEU THR TRP ASP PRO GLU LEU ALA THR ILE ALA GLN ARG SEQRES 8 B 218 TRP ALA ASN GLN CYS THR PHE GLU HIS ASP ALA CYS ARG SEQRES 9 B 218 ASN VAL GLU ARG PHE ALA VAL GLY GLN ASN ILE ALA ALA SEQRES 10 B 218 THR SER SER SER GLY LYS ASN LYS SER THR PRO ASN GLU SEQRES 11 B 218 MET ILE LEU LEU TRP TYR ASN GLU VAL LYS ASP PHE ASP SEQRES 12 B 218 ASN ARG TRP ILE SER SER PHE PRO SER ASP ASP ASN ILE SEQRES 13 B 218 LEU MET LYS VAL GLY HIS TYR THR GLN ILE VAL TRP ALA SEQRES 14 B 218 LYS THR THR LYS ILE GLY CYS GLY ARG ILE MET PHE LYS SEQRES 15 B 218 GLU PRO ASP ASN TRP THR LYS HIS TYR LEU VAL CYS ASN SEQRES 16 B 218 TYR GLY PRO ALA GLY ASN VAL LEU GLY ALA PRO ILE TYR SEQRES 17 B 218 GLU ILE LYS LYS HIS HIS HIS HIS HIS HIS HELIX 1 1 LEU A 6 ASN A 12 1 7 HELIX 2 2 HIS A 16 TYR A 21 1 6 HELIX 3 3 THR A 39 SER A 59 1 21 HELIX 4 4 ASP A 82 ASN A 94 1 13 HELIX 5 5 THR A 127 ASN A 137 1 11 HELIX 6 6 GLU A 138 PHE A 142 5 5 HELIX 7 7 ASP A 143 ILE A 147 5 5 HELIX 8 8 ASP A 153 VAL A 167 1 15 HELIX 9 9 HIS B 16 TYR B 21 1 6 HELIX 10 10 GLY B 27 LEU B 31 5 5 HELIX 11 11 THR B 39 SER B 59 1 21 HELIX 12 12 ASP B 82 ASN B 94 1 13 HELIX 13 13 THR B 127 ASN B 137 1 11 HELIX 14 14 GLU B 138 PHE B 142 5 5 HELIX 15 15 ASP B 143 ILE B 147 5 5 HELIX 16 16 ASP B 153 VAL B 160 1 8 HELIX 17 17 VAL B 160 VAL B 167 1 8 SHEET 1 AA 3 TYR A 33 SER A 34 0 SHEET 2 AA 3 LYS A 173 LYS A 182 -1 O MET A 180 N SER A 34 SHEET 3 AA 3 THR A 80 TRP A 81 1 O THR A 80 N ILE A 174 SHEET 1 AB 4 TYR A 33 SER A 34 0 SHEET 2 AB 4 LYS A 173 LYS A 182 -1 O MET A 180 N SER A 34 SHEET 3 AB 4 THR A 188 GLY A 197 -1 O LYS A 189 N PHE A 181 SHEET 4 AB 4 GLY A 112 SER A 120 -1 O GLY A 112 N TYR A 196 SHEET 1 BA 3 GLU B 32 SER B 34 0 SHEET 2 BA 3 LYS B 173 LYS B 182 -1 O MET B 180 N SER B 34 SHEET 3 BA 3 THR B 80 TRP B 81 1 O THR B 80 N ILE B 174 SHEET 1 BB 4 GLU B 32 SER B 34 0 SHEET 2 BB 4 LYS B 173 LYS B 182 -1 O MET B 180 N SER B 34 SHEET 3 BB 4 THR B 188 GLY B 197 -1 O LYS B 189 N PHE B 181 SHEET 4 BB 4 GLY B 112 SER B 120 -1 O GLY B 112 N TYR B 196 SSBOND 1 CYS A 4 CYS A 19 1555 1555 2.06 SSBOND 2 CYS A 9 CYS A 103 1555 1555 2.92 SSBOND 3 CYS A 30 CYS A 96 1555 1555 2.05 SSBOND 4 CYS A 176 CYS A 194 1555 1555 2.06 SSBOND 5 CYS B 4 CYS B 19 1555 1555 2.05 SSBOND 6 CYS B 30 CYS B 96 1555 1555 2.04 SSBOND 7 CYS B 176 CYS B 194 1555 1555 2.05 CISPEP 1 GLY A 197 PRO A 198 0 -9.80 CISPEP 2 GLY B 197 PRO B 198 0 -8.97 CRYST1 93.355 93.355 144.051 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010712 0.006184 0.000000 0.00000 SCALE2 0.000000 0.012369 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006942 0.00000 MTRIX1 1 0.887500 -0.451100 -0.094060 2.93100 1 MTRIX2 1 -0.453200 -0.891400 -0.001191 4.28300 1 MTRIX3 1 -0.083310 0.043680 -0.995600 43.13000 1