HEADER TRANSCRIPTION 24-OCT-08 2W24 TITLE M. TUBERCULOSIS RV3291C COMPLEXED TO LYSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FEAST OR FAMINE REGULATORY PROTEIN, LEUCINE-RESPONSIVE COMPND 5 REGULATORY PROTEIN, RV3291C; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 VARIANT: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RV3291C, DNA-BINDING, TRANSCRIPTION, LYSINE COMPLEX, TRANSCRIPTION KEYWDS 2 REGULATOR, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR T.SHRIVASTAVA,R.RAMACHANDRAN REVDAT 2 13-DEC-23 2W24 1 REMARK REVDAT 1 17-NOV-09 2W24 0 JRNL AUTH T.SHRIVASTAVA,A.DEY,R.RAMACHANDRAN JRNL TITL LIGAND-INDUCED STRUCTURAL TRANSITIONS, MUTATIONAL ANALYSIS, JRNL TITL 2 AND 'OPEN' QUATERNARY STRUCTURE OF THE M. TUBERCULOSIS JRNL TITL 3 FEAST/FAMINE REGULATORY PROTEIN (RV3291C). JRNL REF J.MOL.BIOL. V. 392 1007 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19651141 JRNL DOI 10.1016/J.JMB.2009.07.084 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 17382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 938 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1245 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2239 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -1.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.257 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2276 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3097 ; 2.540 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 8.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;39.501 ;22.427 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 374 ;23.598 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;23.275 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 378 ; 0.225 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1718 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 842 ; 0.248 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1542 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 32 ; 0.271 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.185 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1472 ; 1.315 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2370 ; 2.499 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 804 ; 4.179 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 727 ; 7.222 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2W24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1290037962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 287 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18364 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 71.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2IVM REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.49000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.49000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.65550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.49000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.49000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.65550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.49000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.49000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.65550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.49000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.49000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.65550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -148.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLU A 3 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLU B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 55 OG REMARK 470 ARG A 57 CG CD NE CZ NH1 NH2 REMARK 470 ALA B 22 CB REMARK 470 GLU B 26 CG CD OE1 OE2 REMARK 470 ARG B 30 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 43 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 48 CG CD NE CZ NH1 NH2 REMARK 470 SER B 55 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 77 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 VAL A 100 CG1 - CB - CG2 ANGL. DEV. = 12.1 DEGREES REMARK 500 VAL A 110 CG1 - CB - CG2 ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG A 126 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASN B 130 CB - CA - C ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG B 146 CG - CD - NE ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 98.25 -161.39 REMARK 500 SER A 79 -79.98 -64.35 REMARK 500 GLN A 80 120.95 -30.91 REMARK 500 ASN A 130 67.05 62.17 REMARK 500 TYR A 143 147.08 -173.61 REMARK 500 ASP B 6 131.99 -37.31 REMARK 500 ALA B 22 123.89 -23.74 REMARK 500 SER B 25 -84.39 -57.45 REMARK 500 GLU B 26 -17.74 -45.13 REMARK 500 ALA B 28 -35.41 -36.95 REMARK 500 THR B 29 -72.23 -63.74 REMARK 500 VAL B 35 -21.01 -38.70 REMARK 500 ASN B 130 76.26 -117.08 REMARK 500 ASP B 145 45.74 32.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 49 VAL A 50 -142.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 146 0.19 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LYS A 1151 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYS A 1151 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VBZ RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- TRYPTOPHAN REMARK 900 RELATED ID: 2IVM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A TRANSCRIPTIONAL REGULATOR REMARK 900 RELATED ID: 2VC1 RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- METHIONINE REMARK 900 RELATED ID: 2W29 RELATED DB: PDB REMARK 900 GLY102THR MUTANT OF RV3291C REMARK 900 RELATED ID: 2VC0 RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- LEUCINE REMARK 900 RELATED ID: 2VBY RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- TYROSINE REMARK 900 RELATED ID: 2VBX RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- PHENYLALANINE REMARK 900 RELATED ID: 2VBW RELATED DB: PDB REMARK 900 FEAST OR FAMINE REGULATORY PROTEIN (RV3291C) FROM M. TUBERCULOSIS REMARK 900 COMPLEXED WITH L- PHENYLALANINE REMARK 900 RELATED ID: 2W25 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GLU104ALA MUTANT DBREF 2W24 A 1 150 UNP P96896 P96896_MYCTU 1 150 DBREF 2W24 B 1 150 UNP P96896 P96896_MYCTU 1 150 SEQRES 1 A 150 MET ASN GLU ALA LEU ASP ASP ILE ASP ARG ILE LEU VAL SEQRES 2 A 150 ARG GLU LEU ALA ALA ASP GLY ARG ALA THR LEU SER GLU SEQRES 3 A 150 LEU ALA THR ARG ALA GLY LEU SER VAL SER ALA VAL GLN SEQRES 4 A 150 SER ARG VAL ARG ARG LEU GLU SER ARG GLY VAL VAL GLN SEQRES 5 A 150 GLY TYR SER ALA ARG ILE ASN PRO GLU ALA VAL GLY HIS SEQRES 6 A 150 LEU LEU SER ALA PHE VAL ALA ILE THR PRO LEU ASP PRO SEQRES 7 A 150 SER GLN PRO ASP ASP ALA PRO ALA ARG LEU GLU HIS ILE SEQRES 8 A 150 GLU GLU VAL GLU SER CYS TYR SER VAL ALA GLY GLU GLU SEQRES 9 A 150 SER TYR VAL LEU LEU VAL ARG VAL ALA SER ALA ARG ALA SEQRES 10 A 150 LEU GLU ASP LEU LEU GLN ARG ILE ARG THR THR ALA ASN SEQRES 11 A 150 VAL ARG THR ARG SER THR ILE ILE LEU ASN THR PHE TYR SEQRES 12 A 150 SER ASP ARG GLN HIS ILE PRO SEQRES 1 B 150 MET ASN GLU ALA LEU ASP ASP ILE ASP ARG ILE LEU VAL SEQRES 2 B 150 ARG GLU LEU ALA ALA ASP GLY ARG ALA THR LEU SER GLU SEQRES 3 B 150 LEU ALA THR ARG ALA GLY LEU SER VAL SER ALA VAL GLN SEQRES 4 B 150 SER ARG VAL ARG ARG LEU GLU SER ARG GLY VAL VAL GLN SEQRES 5 B 150 GLY TYR SER ALA ARG ILE ASN PRO GLU ALA VAL GLY HIS SEQRES 6 B 150 LEU LEU SER ALA PHE VAL ALA ILE THR PRO LEU ASP PRO SEQRES 7 B 150 SER GLN PRO ASP ASP ALA PRO ALA ARG LEU GLU HIS ILE SEQRES 8 B 150 GLU GLU VAL GLU SER CYS TYR SER VAL ALA GLY GLU GLU SEQRES 9 B 150 SER TYR VAL LEU LEU VAL ARG VAL ALA SER ALA ARG ALA SEQRES 10 B 150 LEU GLU ASP LEU LEU GLN ARG ILE ARG THR THR ALA ASN SEQRES 11 B 150 VAL ARG THR ARG SER THR ILE ILE LEU ASN THR PHE TYR SEQRES 12 B 150 SER ASP ARG GLN HIS ILE PRO HET LYS A1151 9 HETNAM LYS LYSINE FORMUL 3 LYS C6 H15 N2 O2 1+ FORMUL 4 HOH *45(H2 O) HELIX 1 1 ASP A 6 ASP A 19 1 14 HELIX 2 2 THR A 23 GLY A 32 1 10 HELIX 3 3 SER A 34 ARG A 48 1 15 HELIX 4 4 ASP A 83 GLU A 89 1 7 HELIX 5 5 SER A 114 ASN A 130 1 17 HELIX 6 6 ASP B 6 ASP B 19 1 14 HELIX 7 7 THR B 23 GLY B 32 1 10 HELIX 8 8 SER B 34 ARG B 48 1 15 HELIX 9 9 PRO B 60 GLY B 64 5 5 HELIX 10 10 ASP B 83 LEU B 88 1 6 HELIX 11 11 SER B 114 ALA B 129 1 16 SHEET 1 AA 2 VAL A 51 ILE A 58 0 SHEET 2 AA 2 VAL B 51 ILE B 58 -1 N GLN B 52 O ARG A 57 SHEET 1 AB 9 LEU A 67 PRO A 75 0 SHEET 2 AB 9 TYR A 106 VAL A 112 -1 O TYR A 106 N ILE A 73 SHEET 3 AB 9 VAL A 94 VAL A 100 -1 N GLU A 95 O LEU A 109 SHEET 4 AB 9 VAL B 131 TYR B 143 -1 N LEU B 139 O SER A 99 SHEET 5 AB 9 LEU B 67 PRO B 75 -1 O SER B 68 N ILE B 138 SHEET 6 AB 9 TYR B 106 VAL B 112 -1 O TYR B 106 N ILE B 73 SHEET 7 AB 9 VAL B 94 ALA B 101 -1 N GLU B 95 O LEU B 109 SHEET 8 AB 9 VAL A 131 TYR A 143 -1 O ILE A 137 N ALA B 101 SHEET 9 AB 9 LEU A 67 PRO A 75 -1 O SER A 68 N ILE A 138 SITE 1 AC1 10 ASP A 82 VAL A 100 ALA A 101 GLY A 102 SITE 2 AC1 10 GLU A 104 TYR A 106 GLU B 119 LEU B 122 SITE 3 AC1 10 ARG B 126 SER B 135 CRYST1 100.980 100.980 99.311 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009903 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010069 0.00000