HEADER    HYDROLASE                               06-NOV-08   2W36              
TITLE     STRUCTURES OF ENDONUCLEASE V WITH DNA REVEAL INITIATION OF DEAMINATED 
TITLE    2 ADENINE REPAIR                                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: ENDONUCLEASE V;                                            
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: DEOXYINOSINE 3'ENDONUCLEASE, DEOXYRIBONUCLEASE V, DNASE V;  
COMPND   5 EC: 3.1.21.7;                                                        
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES;                                                       
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: 5'-D(*GP*CP*BRUP*AP*CP*IP*GP*AP*BRUP*CP*GP)-3';            
COMPND  10 CHAIN: C, E;                                                         
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: 5'-D(*CP*GP*AP*TP*CP*TP*GP*TP*AP*GP*CP)-3';                
COMPND  14 CHAIN: D, F;                                                         
COMPND  15 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA;                            
SOURCE   3 ORGANISM_TAXID: 2336;                                                
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL;                             
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: PET28B;                                   
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 SYNTHETIC: YES;                                                      
SOURCE  10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  11 ORGANISM_TAXID: 32630;                                               
SOURCE  12 MOL_ID: 3;                                                           
SOURCE  13 SYNTHETIC: YES;                                                      
SOURCE  14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  15 ORGANISM_TAXID: 32630                                                
KEYWDS    HYPOXANTHINE, ENDONUCLEASE, ENDONUCLEASEV, HYDROLASE, INOSINE, DNA    
KEYWDS   2 DAMAGE, DNA REPAIR                                                   
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    B.DALHUS,A.S.ARVAI,I.ROSNES,O.E.OLSEN,P.H.BACKE,I.ALSETH,H.GAO,W.CAO, 
AUTHOR   2 J.A.TAINER,M.BJORAS                                                  
REVDAT   4   08-MAY-24 2W36    1       REMARK                                   
REVDAT   3   25-DEC-19 2W36    1       SOURCE REMARK LINK                       
REVDAT   2   21-APR-09 2W36    1       JRNL   REMARK                            
REVDAT   1   20-JAN-09 2W36    0                                                
JRNL        AUTH   B.DALHUS,A.S.ARVAI,I.ROSNES,O.E.OLSEN,P.H.BACKE,I.ALSETH,    
JRNL        AUTH 2 H.GAO,W.CAO,J.A.TAINER,M.BJORAS                              
JRNL        TITL   STRUCTURES OF ENDONUCLEASE V WITH DNA REVEAL INITIATION OF   
JRNL        TITL 2 DEAMINATED ADENINE REPAIR.                                   
JRNL        REF    NAT.STRUCT.MOL.BIOL.          V.  16   138 2009              
JRNL        REFN                   ISSN 1545-9993                               
JRNL        PMID   19136958                                                     
JRNL        DOI    10.1038/NSMB.1538                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.10 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 82.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 32087                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.258                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 8.200                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3197                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 10                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.10                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.18                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 54.00                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 1882                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3380                       
REMARK   3   BIN FREE R VALUE                    : 0.3510                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 10.00                        
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 189                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3574                                    
REMARK   3   NUCLEIC ACID ATOMS       : 648                                     
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 221                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 58.10                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.31                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.37                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.006                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.300                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 22.50                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : 0.29                                                 
REMARK   3   BSOL        : 41.00                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : INOSIN.PARAM                                   
REMARK   3  PARAMETER FILE  3  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  4  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  5  : 5BU.PARAM                                      
REMARK   3  PARAMETER FILE  6  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : INOSIN.TOP                                     
REMARK   3  TOPOLOGY FILE  3   : WATER.TOP                                      
REMARK   3  TOPOLOGY FILE  4   : ION.TOP                                        
REMARK   3  TOPOLOGY FILE  5   : 5BU.TOP                                        
REMARK   3  TOPOLOGY FILE  6   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2W36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-NOV-08.                  
REMARK 100 THE DEPOSITION ID IS D_1290035774.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ALS                                
REMARK 200  BEAMLINE                       : 12.3.1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9117                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC CCD                           
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 32087                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.100                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 87.6                               
REMARK 200  DATA REDUNDANCY                : 13.30                              
REMARK 200  R MERGE                    (I) : 0.05000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 69.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.19                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 62.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 10.60                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.35000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 5.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD                          
REMARK 200 SOFTWARE USED: SOLVE                                                 
REMARK 200 STARTING MODEL: NONE                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 53.16                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z                                                 
REMARK 290       3555   -X,Y,-Z                                                 
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z+1/2                                       
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z+1/2                                     
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       25.98950            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       66.11950            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       95.80800            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       25.98950            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       66.11950            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       95.80800            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       25.98950            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       66.11950            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       95.80800            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       25.98950            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       66.11950            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000       95.80800            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 TOTAL BURIED SURFACE AREA: 6280 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 26670 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.9 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       51.97900            
REMARK 350   BIOMT2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 TOTAL BURIED SURFACE AREA: 6530 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 26610 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.6 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       51.97900            
REMARK 350   BIOMT2   2  0.000000 -1.000000  0.000000      264.47800            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A2035  LIES ON A SPECIAL POSITION.                          
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASP  43 TO ALA                        
REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ASP  43 TO ALA                        
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     PHE A   225                                                      
REMARK 465     PHE B   225                                                      
REMARK 465      DC D    12                                                      
REMARK 465      DG D    13                                                      
REMARK 465      DA D    14                                                      
REMARK 465      DT D    15                                                      
REMARK 465      DC D    16                                                      
REMARK 465      DT D    17                                                      
REMARK 465      DC F    12                                                      
REMARK 465      DG F    13                                                      
REMARK 465      DA F    14                                                      
REMARK 465      DT F    15                                                      
REMARK 465      DC F    16                                                      
REMARK 465      DT F    17                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LEU A 224    CA   C    O    CB   CG   CD1  CD2                   
REMARK 470     LEU B 224    CA   C    O    CB   CG   CD1  CD2                   
REMARK 470      DG D  18    P    OP1  OP2                                       
REMARK 470      DG F  18    P    OP1  OP2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A 120       72.34   -155.42                                   
REMARK 500    ASP A 151       48.57    -84.35                                   
REMARK 500    LYS A 152     -150.08    -86.79                                   
REMARK 500    CYS A 154       12.39   -142.42                                   
REMARK 500    LYS A 222      -78.25   -132.75                                   
REMARK 500    ALA B 115       70.52    -66.77                                   
REMARK 500    LYS B 222      -64.77    -95.90                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500     DC E  10         0.06    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2009        DISTANCE =  5.81 ANGSTROMS                       
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2W35   RELATED DB: PDB                                   
REMARK 900 STRUCTURES OF ENDONUCLEASE V WITH DNA REVEAL INITIATION OF           
REMARK 900 DEAMINATED ADENINE REPAIR                                            
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 ASP 43 ALA MUTATION                                                  
DBREF  2W36 A    1   225  UNP    Q9X2H9   NFI_THEMA        1    225             
DBREF  2W36 B    1   225  UNP    Q9X2H9   NFI_THEMA        1    225             
DBREF  2W36 C    1    11  PDB    2W36     2W36             1     11             
DBREF  2W36 D   12    22  PDB    2W36     2W36            12     22             
DBREF  2W36 E    1    11  PDB    2W36     2W36             1     11             
DBREF  2W36 F   12    22  PDB    2W36     2W36            12     22             
SEQADV 2W36 ALA A   43  UNP  Q9X2H9    ASP    43 ENGINEERED MUTATION            
SEQADV 2W36 ALA B   43  UNP  Q9X2H9    ASP    43 ENGINEERED MUTATION            
SEQRES   1 A  225  MET ASP TYR ARG GLN LEU HIS ARG TRP ASP LEU PRO PRO          
SEQRES   2 A  225  GLU GLU ALA ILE LYS VAL GLN ASN GLU LEU ARG LYS LYS          
SEQRES   3 A  225  ILE LYS LEU THR PRO TYR GLU GLY GLU PRO GLU TYR VAL          
SEQRES   4 A  225  ALA GLY VAL ALA LEU SER PHE PRO GLY LYS GLU GLU GLY          
SEQRES   5 A  225  LEU ALA VAL ILE VAL VAL LEU GLU TYR PRO SER PHE LYS          
SEQRES   6 A  225  ILE LEU GLU VAL VAL SER GLU ARG GLY GLU ILE THR PHE          
SEQRES   7 A  225  PRO TYR ILE PRO GLY LEU LEU ALA PHE ARG GLU GLY PRO          
SEQRES   8 A  225  LEU PHE LEU LYS ALA TRP GLU LYS LEU ARG THR LYS PRO          
SEQRES   9 A  225  ASP VAL VAL VAL PHE ASP GLY GLN GLY LEU ALA HIS PRO          
SEQRES  10 A  225  ARG LYS LEU GLY ILE ALA SER HIS MET GLY LEU PHE ILE          
SEQRES  11 A  225  GLU ILE PRO THR ILE GLY VAL ALA LYS SER ARG LEU TYR          
SEQRES  12 A  225  GLY THR PHE LYS MET PRO GLU ASP LYS ARG CYS SER TRP          
SEQRES  13 A  225  SER TYR LEU TYR ASP GLY GLU GLU ILE ILE GLY CYS VAL          
SEQRES  14 A  225  ILE ARG THR LYS GLU GLY SER ALA PRO ILE PHE VAL SER          
SEQRES  15 A  225  PRO GLY HIS LEU MET ASP VAL GLU SER SER LYS ARG LEU          
SEQRES  16 A  225  ILE LYS ALA PHE THR LEU PRO GLY ARG ARG ILE PRO GLU          
SEQRES  17 A  225  PRO THR ARG LEU ALA HIS ILE TYR THR GLN ARG LEU LYS          
SEQRES  18 A  225  LYS GLY LEU PHE                                              
SEQRES   1 B  225  MET ASP TYR ARG GLN LEU HIS ARG TRP ASP LEU PRO PRO          
SEQRES   2 B  225  GLU GLU ALA ILE LYS VAL GLN ASN GLU LEU ARG LYS LYS          
SEQRES   3 B  225  ILE LYS LEU THR PRO TYR GLU GLY GLU PRO GLU TYR VAL          
SEQRES   4 B  225  ALA GLY VAL ALA LEU SER PHE PRO GLY LYS GLU GLU GLY          
SEQRES   5 B  225  LEU ALA VAL ILE VAL VAL LEU GLU TYR PRO SER PHE LYS          
SEQRES   6 B  225  ILE LEU GLU VAL VAL SER GLU ARG GLY GLU ILE THR PHE          
SEQRES   7 B  225  PRO TYR ILE PRO GLY LEU LEU ALA PHE ARG GLU GLY PRO          
SEQRES   8 B  225  LEU PHE LEU LYS ALA TRP GLU LYS LEU ARG THR LYS PRO          
SEQRES   9 B  225  ASP VAL VAL VAL PHE ASP GLY GLN GLY LEU ALA HIS PRO          
SEQRES  10 B  225  ARG LYS LEU GLY ILE ALA SER HIS MET GLY LEU PHE ILE          
SEQRES  11 B  225  GLU ILE PRO THR ILE GLY VAL ALA LYS SER ARG LEU TYR          
SEQRES  12 B  225  GLY THR PHE LYS MET PRO GLU ASP LYS ARG CYS SER TRP          
SEQRES  13 B  225  SER TYR LEU TYR ASP GLY GLU GLU ILE ILE GLY CYS VAL          
SEQRES  14 B  225  ILE ARG THR LYS GLU GLY SER ALA PRO ILE PHE VAL SER          
SEQRES  15 B  225  PRO GLY HIS LEU MET ASP VAL GLU SER SER LYS ARG LEU          
SEQRES  16 B  225  ILE LYS ALA PHE THR LEU PRO GLY ARG ARG ILE PRO GLU          
SEQRES  17 B  225  PRO THR ARG LEU ALA HIS ILE TYR THR GLN ARG LEU LYS          
SEQRES  18 B  225  LYS GLY LEU PHE                                              
SEQRES   1 C   11   DG  DC BRU  DA  DC  DI  DG  DA BRU  DC  DG                  
SEQRES   1 D   11   DC  DG  DA  DT  DC  DT  DG  DT  DA  DG  DC                  
SEQRES   1 E   11   DG  DC BRU  DA  DC  DI  DG  DA BRU  DC  DG                  
SEQRES   1 F   11   DC  DG  DA  DT  DC  DT  DG  DT  DA  DG  DC                  
MODRES 2W36 BRU C    3   DU                                                     
MODRES 2W36 BRU C    9   DU                                                     
MODRES 2W36 BRU E    3   DU                                                     
MODRES 2W36 BRU E    9   DU                                                     
HET    BRU  C   3      20                                                       
HET    BRU  C   9      20                                                       
HET    BRU  E   3      20                                                       
HET    BRU  E   9      20                                                       
HETNAM     BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE                         
FORMUL   3  BRU    4(C9 H12 BR N2 O8 P)                                         
FORMUL   7  HOH   *221(H2 O)                                                    
HELIX    1   1 PRO A   12  ARG A   24  1                                  13    
HELIX    2   2 LYS A   25  ILE A   27  5                                   3    
HELIX    3   3 LEU A   85  GLU A   98  1                                  14    
HELIX    4   4 GLY A  121  GLU A  131  1                                  11    
HELIX    5   5 ASP A  188  THR A  200  1                                  13    
HELIX    6   6 PRO A  207  LYS A  221  1                                  15    
HELIX    7   7 PRO B   12  ARG B   24  1                                  13    
HELIX    8   8 LYS B   25  ILE B   27  5                                   3    
HELIX    9   9 LEU B   85  LEU B  100  1                                  16    
HELIX   10  10 GLY B  121  GLU B  131  1                                  11    
HELIX   11  11 ASP B  188  THR B  200  1                                  13    
HELIX   12  12 PRO B  207  GLY B  223  1                                  17    
SHEET    1  AA 8 LYS A  65  GLU A  75  0                                        
SHEET    2  AA 8 GLU A  51  GLU A  60 -1  O  GLY A  52   N  GLY A  74           
SHEET    3  AA 8 TYR A  38  GLY A  48 -1  O  VAL A  39   N  LEU A  59           
SHEET    4  AA 8 VAL A 106  ASP A 110  1  O  VAL A 106   N  ALA A  40           
SHEET    5  AA 8 THR A 134  ALA A 138  1  O  ILE A 135   N  PHE A 109           
SHEET    6  AA 8 ILE A 179  PRO A 183 -1  O  PHE A 180   N  ALA A 138           
SHEET    7  AA 8 GLU A 164  ILE A 170 -1  O  CYS A 168   N  VAL A 181           
SHEET    8  AA 8 TRP A 156  ASP A 161 -1  O  SER A 157   N  VAL A 169           
SHEET    1  BA 8 LYS B  65  GLU B  75  0                                        
SHEET    2  BA 8 GLU B  51  GLU B  60 -1  O  GLY B  52   N  GLY B  74           
SHEET    3  BA 8 TYR B  38  GLY B  48 -1  O  VAL B  39   N  LEU B  59           
SHEET    4  BA 8 VAL B 106  ASP B 110  1  O  VAL B 106   N  ALA B  40           
SHEET    5  BA 8 THR B 134  ALA B 138  1  O  ILE B 135   N  PHE B 109           
SHEET    6  BA 8 ILE B 179  PRO B 183 -1  O  PHE B 180   N  ALA B 138           
SHEET    7  BA 8 GLU B 164  ARG B 171 -1  O  CYS B 168   N  VAL B 181           
SHEET    8  BA 8 SER B 155  ASP B 161 -1  O  SER B 155   N  ARG B 171           
LINK         O3'  DC C   2                 P   BRU C   3     1555   1555  1.61  
LINK         O3' BRU C   3                 P    DA C   4     1555   1555  1.60  
LINK         O3'  DA C   8                 P   BRU C   9     1555   1555  1.61  
LINK         O3' BRU C   9                 P    DC C  10     1555   1555  1.60  
LINK         O3'  DC E   2                 P   BRU E   3     1555   1555  1.61  
LINK         O3' BRU E   3                 P    DA E   4     1555   1555  1.60  
LINK         O3'  DA E   8                 P   BRU E   9     1555   1555  1.61  
LINK         O3' BRU E   9                 P    DC E  10     1555   1555  1.60  
CISPEP   1 TYR A   61    PRO A   62          0        -0.14                     
CISPEP   2 TYR B   61    PRO B   62          0         0.20                     
CRYST1   51.979  132.239  191.616  90.00  90.00  90.00 I 2 2 2      16          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.019239  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.007562  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005219        0.00000