HEADER HYDROLASE 17-NOV-08 2W3Z TITLE STRUCTURE OF A STREPTOCOCCUS MUTANS CE4 ESTERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE DEACETYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYSACCHARIDE DEACETYLASE; COMPND 5 EC: 3.5.1.41; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: ZINC AND PHOSPHATE IN ACTIVE SITE, N-TERMINAL SIGNAL COMPND 8 PEPTIDE REMOVED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS UA159; SOURCE 3 ORGANISM_TAXID: 210007; SOURCE 4 ATCC: 700610; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS PGDA, GLCNAC DE-N-ACETYLASE, HYDROLASE, DIVALE METAL CATION KEYWDS 2 DEPENDENT, CARBOHYDRATE ESTERASE FAMILY 4, CELL SURFACE SURFACE KEYWDS 3 DEACETYLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.DENG,J.E.URCH,J.M.TEN CATE,V.A.RAO,D.M.F.VAN AALTEN,W.CRIELAARD REVDAT 3 08-MAY-24 2W3Z 1 LINK REVDAT 2 30-DEC-08 2W3Z 1 JRNL REVDAT 1 02-DEC-08 2W3Z 0 JRNL AUTH D.M.DENG,J.E.URCH,J.M.TEN CATE,V.A.RAO,D.M.F.VAN AALTEN, JRNL AUTH 2 W.CRIELAARD JRNL TITL STREPTOCOCCUS MUTANS SMU.623C CODES FOR A FUNCTIONAL, METAL JRNL TITL 2 DEPENDENT POLYSACCHARIDE DEACETYLASE THAT MODULATES JRNL TITL 3 INTERACTIONS WITH SALIVARY AGGLUTININ. JRNL REF J.BACTERIOL. V. 191 394 2009 JRNL REFN ISSN 0021-9193 JRNL PMID 18978064 JRNL DOI 10.1128/JB.00838-08 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 61312 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1251 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.50 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6070 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1861 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 299 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.707 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 50.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : ION.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2W3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1290038128. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61316 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, WARPNTRACE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M NA/K PHOSPHATE, PH 5.6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 64.15300 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 64.15300 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 64.15300 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 64.15300 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 64.15300 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 VAL A 3 REMARK 465 GLN A 4 REMARK 465 GLN A 5 REMARK 465 HIS A 6 REMARK 465 TRP A 7 REMARK 465 LYS A 8 REMARK 465 LYS A 9 REMARK 465 TRP A 10 REMARK 465 GLN A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 ILE A 14 REMARK 465 PHE A 15 REMARK 465 SER A 16 REMARK 465 ALA A 17 REMARK 465 LYS A 18 REMARK 465 ASN A 19 REMARK 465 ARG A 20 REMARK 465 PRO A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 LEU A 24 REMARK 465 PHE A 25 REMARK 465 SER A 26 REMARK 465 LEU A 27 REMARK 465 LEU A 28 REMARK 465 ILE A 29 REMARK 465 ILE A 30 REMARK 465 GLY A 31 REMARK 465 LEU A 32 REMARK 465 VAL A 33 REMARK 465 LEU A 34 REMARK 465 GLY A 35 REMARK 465 VAL A 36 REMARK 465 VAL A 37 REMARK 465 LEU A 38 REMARK 465 VAL A 39 REMARK 465 GLN A 40 REMARK 465 ALA A 41 REMARK 465 LYS A 42 REMARK 465 SER A 43 REMARK 465 MET A 44 REMARK 465 GLN A 45 REMARK 465 LYS A 46 REMARK 465 GLN A 47 REMARK 465 HIS A 48 REMARK 465 LYS A 49 REMARK 465 ASN A 50 REMARK 465 HIS A 51 REMARK 465 ILE A 52 REMARK 465 ARG A 53 REMARK 465 SER A 54 REMARK 465 SER A 55 REMARK 465 ARG A 56 REMARK 465 ILE A 57 REMARK 465 SER A 58 REMARK 465 LYS A 59 REMARK 465 LYS A 60 REMARK 465 LYS A 61 REMARK 465 THR A 62 REMARK 465 THR A 63 REMARK 465 PRO A 64 REMARK 465 LYS A 65 REMARK 465 PRO A 66 REMARK 465 ASN A 67 REMARK 465 LYS A 100 REMARK 465 GLN A 101 REMARK 465 ALA A 102 REMARK 465 SER A 103 REMARK 465 ALA A 104 REMARK 465 LYS A 105 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 99 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 115 3.94 93.23 REMARK 500 SER A 167 175.17 71.46 REMARK 500 ASP A 238 -130.68 -99.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1312 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 115 OD1 REMARK 620 2 HIS A 166 NE2 86.6 REMARK 620 3 HIS A 170 NE2 99.4 102.0 REMARK 620 4 PO4 A1313 O2 155.2 91.3 105.1 REMARK 620 5 HOH A2295 O 86.2 162.5 94.9 88.7 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1314 DBREF 2W3Z A 1 311 UNP Q8DV82 Q8DV82_STRMU 1 311 SEQRES 1 A 311 MET THR VAL GLN GLN HIS TRP LYS LYS TRP GLN ALA LYS SEQRES 2 A 311 ILE PHE SER ALA LYS ASN ARG PRO ASN LEU LEU PHE SER SEQRES 3 A 311 LEU LEU ILE ILE GLY LEU VAL LEU GLY VAL VAL LEU VAL SEQRES 4 A 311 GLN ALA LYS SER MET GLN LYS GLN HIS LYS ASN HIS ILE SEQRES 5 A 311 ARG SER SER ARG ILE SER LYS LYS LYS THR THR PRO LYS SEQRES 6 A 311 PRO ASN ILE ASN PRO ASN ALA LEU LYS ILE GLY SER ASN SEQRES 7 A 311 HIS ASN ASN GLN ALA GLU GLY TYR ALA TYR SER ALA GLU SEQRES 8 A 311 THR VAL ARG GLN MET MET ASN ASN LYS GLN ALA SER ALA SEQRES 9 A 311 LYS GLN LYS LEU VAL PHE LEU THR PHE ASP ASP GLY VAL SEQRES 10 A 311 ASP PRO ASN MET THR PRO LYS ILE LEU ASP VAL LEU ALA SEQRES 11 A 311 GLN GLN HIS VAL HIS ALA THR PHE PHE LEU VAL GLY CYS SEQRES 12 A 311 ASN ILE THR ASP LYS VAL LYS PRO ILE LEU GLN ARG GLN SEQRES 13 A 311 ILE THR GLU GLY HIS ALA LEU GLY ILE HIS SER PHE SER SEQRES 14 A 311 HIS VAL TYR SER LEU LEU TYR PRO ASN ARG VAL GLY ASN SEQRES 15 A 311 THR GLN GLN ILE VAL SER GLU VAL THR ARG THR GLN ASN SEQRES 16 A 311 ALA LEU LYS ASP GLN LEU GLY GLN ASN PHE LYS THR GLY SEQRES 17 A 311 VAL TRP ARG TYR PRO GLY GLY HIS LEU SER TRP THR GLY SEQRES 18 A 311 LEU GLU ALA ALA ASP LYS GLN LEU ALA ALA GLN GLY ILE SEQRES 19 A 311 GLN TRP MET ASP TRP ASN ALA ALA VAL GLY ASP ALA GLU SEQRES 20 A 311 PRO LEU ALA THR ARG PRO THR THR VAL ALA SER MET LEU SEQRES 21 A 311 ALA PHE LEU ASP GLY SER ALA LYS ILE ALA THR ASN PRO SEQRES 22 A 311 ASN VAL GLN VAL VAL LEU MET HIS ASP ILE SER GLU LYS SEQRES 23 A 311 THR ILE THR LEU ALA SER LEU PRO GLN ILE ILE ARG TYR SEQRES 24 A 311 TYR LYS ASP ARG GLY TYR THR PHE ALA VAL LEU LYS HET ZN A1312 1 HET PO4 A1313 5 HET PO4 A1314 5 HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION FORMUL 2 ZN ZN 2+ FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *299(H2 O) HELIX 1 1 ASN A 81 GLY A 85 5 5 HELIX 2 2 SER A 89 ASN A 98 1 10 HELIX 3 3 ASN A 120 GLN A 132 1 13 HELIX 4 4 GLY A 142 ILE A 145 5 4 HELIX 5 5 THR A 146 LYS A 148 5 3 HELIX 6 6 VAL A 149 GLU A 159 1 11 HELIX 7 7 VAL A 171 TYR A 176 1 6 HELIX 8 8 PRO A 177 ARG A 179 5 3 HELIX 9 9 ASN A 182 GLY A 202 1 21 HELIX 10 10 GLY A 215 TRP A 219 5 5 HELIX 11 11 LEU A 222 ALA A 231 1 10 HELIX 12 12 PRO A 248 ARG A 252 5 5 HELIX 13 13 THR A 255 ALA A 267 1 13 HELIX 14 14 LYS A 286 ARG A 303 1 18 SHEET 1 AA 2 ALA A 87 TYR A 88 0 SHEET 2 AA 2 VAL A 309 LEU A 310 1 O VAL A 309 N TYR A 88 SHEET 1 AB 4 ALA A 162 ILE A 165 0 SHEET 2 AB 4 THR A 137 LEU A 140 1 O PHE A 138 N GLY A 164 SHEET 3 AB 4 LEU A 108 GLY A 116 1 O LEU A 111 N THR A 137 SHEET 4 AB 4 THR A 306 PHE A 307 1 O THR A 306 N VAL A 109 SHEET 1 AC 5 ALA A 162 ILE A 165 0 SHEET 2 AC 5 THR A 137 LEU A 140 1 O PHE A 138 N GLY A 164 SHEET 3 AC 5 LEU A 108 GLY A 116 1 O LEU A 111 N THR A 137 SHEET 4 AC 5 VAL A 275 HIS A 281 1 O GLN A 276 N PHE A 110 SHEET 5 AC 5 ALA A 241 ALA A 242 1 O ALA A 241 N LEU A 279 SHEET 1 AD 2 VAL A 209 TRP A 210 0 SHEET 2 AD 2 GLN A 235 TRP A 236 1 O GLN A 235 N TRP A 210 LINK OD1 ASP A 115 ZN ZN A1312 1555 1555 2.14 LINK NE2 HIS A 166 ZN ZN A1312 1555 1555 2.10 LINK NE2 HIS A 170 ZN ZN A1312 1555 1555 2.08 LINK ZN ZN A1312 O2 PO4 A1313 1555 1555 2.06 LINK ZN ZN A1312 O HOH A2295 1555 1555 2.11 CISPEP 1 GLY A 116 VAL A 117 0 -3.60 SITE 1 AC1 5 ASP A 115 HIS A 166 HIS A 170 PO4 A1313 SITE 2 AC1 5 HOH A2295 SITE 1 AC2 11 ASP A 114 HIS A 166 HIS A 170 PRO A 213 SITE 2 AC2 11 GLY A 214 TRP A 239 HIS A 281 ZN A1312 SITE 3 AC2 11 HOH A2295 HOH A2296 HOH A2297 SITE 1 AC3 5 ARG A 192 LYS A 227 HOH A2179 HOH A2298 SITE 2 AC3 5 HOH A2299 CRYST1 128.306 128.306 128.306 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007794 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007794 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007794 0.00000