HEADER HYDROLASE 21-NOV-08 2W46 TITLE CBM35 FROM CELLVIBRIO JAPONICUS ABF62 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE D; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CARBOHYDRATE BINDING DOMAIN, RESIDUES 155-298; COMPND 5 SYNONYM: FAMILY 35 CARBOHYDRATE BINDING DOMAIN; COMPND 6 EC: 3.2.1.55; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CELLVIBRIO JAPONICUS; SOURCE 3 ORGANISM_TAXID: 155077; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS ARABINOFURANOSIDASE, CARBOHYDRATE BINDING MODULE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.MONTAINER,A.LAMMERTS VAN BUEREN,C.DUMON,J.E.FLINT,M.A.CORREIA, AUTHOR 2 J.A.PRATES,S.J.FIRBANK,R.J.LEWIS,G.G.GRONDIN,M.G.GHINET,T.M.GLOSTER, AUTHOR 3 C.HERVE,J.P.KNOX,B.G.TALBOT,J.P.TURKENBURG,J.KEROVUO,R.BRZEZINSKI, AUTHOR 4 C.M.G.A.FONTES,G.J.DAVIES,A.B.BORASTON,H.J.GILBERT REVDAT 5 09-OCT-24 2W46 1 REMARK LINK REVDAT 4 28-JUN-17 2W46 1 REMARK REVDAT 3 04-APR-12 2W46 1 AUTHOR REMARK VERSN FORMUL REVDAT 2 17-NOV-09 2W46 1 JRNL REMARK REVDAT 1 27-JAN-09 2W46 0 JRNL AUTH C.MONTANIER,A.L.VAN BUEREN,C.DUMON,J.E.FLINT,M.A.CORREIA, JRNL AUTH 2 J.A.PRATES,S.J.FIRBANK,R.J.LEWIS,G.G.GRONDIN,M.G.GHINET, JRNL AUTH 3 T.M.GLOSTER,C.HERVE,J.P.KNOX,B.G.TALBOT,J.P.TURKENBURG, JRNL AUTH 4 J.KEROVUO,R.BRZEZINSKI,C.M.G.A.FONTES,G.J.DAVIES, JRNL AUTH 5 A.B.BORASTON,H.J.GILBERT JRNL TITL EVIDENCE THAT FAMILY 35 CARBOHYDRATE BINDING MODULES DISPLAY JRNL TITL 2 CONSERVED SPECIFICITY BUT DIVERGENT FUNCTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 3065 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19218457 JRNL DOI 10.1073/PNAS.0808972106 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 16341 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 889 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1157 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1410 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1959 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 423 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.03000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.163 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2029 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2788 ; 1.562 ; 1.915 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 7.321 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;34.459 ;25.227 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 285 ;12.139 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.181 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1570 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 901 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1410 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 340 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.187 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 53 ; 0.137 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1352 ; 0.865 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2163 ; 1.466 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 711 ; 2.405 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 617 ; 3.529 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2W46 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1290037987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16341 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 23.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M SODIUM THIOCYANATE, 20% PEG3350, REMARK 280 PH 6.9 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 SER A 85 REMARK 465 ASN A 86 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 VAL B 6 REMARK 465 ALA B 7 REMARK 465 SER B 8 REMARK 465 ALA B 9 REMARK 465 GLY B 84 REMARK 465 SER B 85 REMARK 465 ASN B 86 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 88 O HOH A 2149 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 60 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP B 108 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 21 147.27 -170.71 REMARK 500 ASN A 28 22.45 -148.61 REMARK 500 ASN A 42 150.75 -47.41 REMARK 500 ASN B 28 22.94 -151.79 REMARK 500 ASN B 42 152.18 -45.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2012 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A2042 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH B2045 DISTANCE = 7.04 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1148 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 13 OE1 REMARK 620 2 GLU A 14 OE1 94.4 REMARK 620 3 GLU A 14 OE2 87.0 53.3 REMARK 620 4 THR A 34 O 85.0 135.9 82.6 REMARK 620 5 GLY A 37 O 162.0 81.4 76.4 86.0 REMARK 620 6 ASP A 132 O 80.9 77.7 128.4 144.6 114.9 REMARK 620 7 ASP A 132 OD1 110.8 141.1 151.6 77.4 82.3 77.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1149 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 40 OD1 REMARK 620 2 THR A 41 O 85.9 REMARK 620 3 HOH A2088 O 97.9 100.7 REMARK 620 4 HOH A2193 O 160.4 81.5 99.2 REMARK 620 5 HOH A2195 O 85.5 171.4 81.2 106.5 REMARK 620 6 HOH A2197 O 82.5 105.1 154.1 86.3 72.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1148 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 13 OE1 REMARK 620 2 GLU B 14 OE1 91.2 REMARK 620 3 GLU B 14 OE2 86.3 52.7 REMARK 620 4 THR B 34 O 88.7 134.9 82.3 REMARK 620 5 GLY B 37 O 160.3 80.8 74.5 84.4 REMARK 620 6 ASP B 132 O 78.5 77.2 127.3 146.1 116.6 REMARK 620 7 ASP B 132 OD1 112.1 139.7 154.1 80.1 84.9 76.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1149 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 40 OD1 REMARK 620 2 THR B 41 O 84.5 REMARK 620 3 HOH B2081 O 95.4 100.9 REMARK 620 4 HOH B2180 O 162.3 83.7 99.8 REMARK 620 5 HOH B2182 O 85.3 106.3 152.7 85.3 REMARK 620 6 HOH B2183 O 86.3 170.8 79.8 105.3 73.0 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1149 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W47 RELATED DB: PDB REMARK 900 CLOSTRIDIUM THERMOCELLUM CBM35 IN COMPLEX WITH DELTA-4,5- REMARK 900 ANHYDROGALACTURONIC ACID DBREF 2W46 A 4 147 UNP Q51815 Q51815_9GAMM 155 298 DBREF 2W46 B 4 147 UNP Q51815 Q51815_9GAMM 155 298 SEQRES 1 A 144 SER SER VAL ALA SER ALA LEU LEU LEU GLN GLU ALA GLN SEQRES 2 A 144 ALA GLY PHE CYS ARG VAL ASP GLY THR ILE ASP ASN ASN SEQRES 3 A 144 HIS THR GLY PHE THR GLY SER GLY PHE ALA ASN THR ASN SEQRES 4 A 144 ASN ALA GLN GLY ALA ALA VAL VAL TRP ALA ILE ASP ALA SEQRES 5 A 144 THR SER SER GLY ARG ARG THR LEU THR ILE ARG TYR ALA SEQRES 6 A 144 ASN GLY GLY THR ALA ASN ARG ASN GLY SER LEU VAL ILE SEQRES 7 A 144 ASN GLY GLY SER ASN GLY ASN TYR THR VAL SER LEU PRO SEQRES 8 A 144 THR THR GLY ALA TRP THR THR TRP GLN THR ALA THR ILE SEQRES 9 A 144 ASP VAL ASP LEU VAL GLN GLY ASN ASN ILE VAL GLN LEU SEQRES 10 A 144 SER ALA THR THR ALA GLU GLY LEU PRO ASN ILE ASP SER SEQRES 11 A 144 LEU SER VAL VAL GLY GLY THR VAL ARG ALA GLY ASN CYS SEQRES 12 A 144 GLY SEQRES 1 B 144 SER SER VAL ALA SER ALA LEU LEU LEU GLN GLU ALA GLN SEQRES 2 B 144 ALA GLY PHE CYS ARG VAL ASP GLY THR ILE ASP ASN ASN SEQRES 3 B 144 HIS THR GLY PHE THR GLY SER GLY PHE ALA ASN THR ASN SEQRES 4 B 144 ASN ALA GLN GLY ALA ALA VAL VAL TRP ALA ILE ASP ALA SEQRES 5 B 144 THR SER SER GLY ARG ARG THR LEU THR ILE ARG TYR ALA SEQRES 6 B 144 ASN GLY GLY THR ALA ASN ARG ASN GLY SER LEU VAL ILE SEQRES 7 B 144 ASN GLY GLY SER ASN GLY ASN TYR THR VAL SER LEU PRO SEQRES 8 B 144 THR THR GLY ALA TRP THR THR TRP GLN THR ALA THR ILE SEQRES 9 B 144 ASP VAL ASP LEU VAL GLN GLY ASN ASN ILE VAL GLN LEU SEQRES 10 B 144 SER ALA THR THR ALA GLU GLY LEU PRO ASN ILE ASP SER SEQRES 11 B 144 LEU SER VAL VAL GLY GLY THR VAL ARG ALA GLY ASN CYS SEQRES 12 B 144 GLY HET CA A1148 1 HET NA A1149 1 HET CA B1148 1 HET NA B1149 1 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 4 NA 2(NA 1+) FORMUL 7 HOH *423(H2 O) SHEET 1 AA 4 LEU A 10 GLN A 13 0 SHEET 2 AA 4 ASN A 130 VAL A 137 -1 O LEU A 134 N LEU A 12 SHEET 3 AA 4 GLY A 59 ALA A 68 -1 O THR A 62 N VAL A 137 SHEET 4 AA 4 TRP A 102 LEU A 111 -1 O GLN A 103 N TYR A 67 SHEET 1 AB 5 PHE A 19 VAL A 22 0 SHEET 2 AB 5 ALA A 48 ALA A 55 -1 O VAL A 50 N CYS A 20 SHEET 3 AB 5 GLY A 114 ALA A 122 -1 O GLY A 114 N ALA A 55 SHEET 4 AB 5 GLY A 77 ILE A 81 -1 O SER A 78 N SER A 121 SHEET 5 AB 5 ASN A 88 VAL A 91 -1 O TYR A 89 N LEU A 79 SHEET 1 AC 3 PHE A 19 VAL A 22 0 SHEET 2 AC 3 ALA A 48 ALA A 55 -1 O VAL A 50 N CYS A 20 SHEET 3 AC 3 VAL A 141 ALA A 143 -1 O ARG A 142 N ASP A 54 SHEET 1 AD 2 GLY A 24 ASP A 27 0 SHEET 2 AD 2 PHE A 38 THR A 41 -1 O PHE A 38 N ASP A 27 SHEET 1 BA 4 LEU B 11 GLN B 13 0 SHEET 2 BA 4 ASN B 130 VAL B 137 -1 O LEU B 134 N LEU B 12 SHEET 3 BA 4 GLY B 59 ALA B 68 -1 O THR B 62 N VAL B 137 SHEET 4 BA 4 TRP B 102 LEU B 111 -1 O GLN B 103 N TYR B 67 SHEET 1 BB 5 PHE B 19 VAL B 22 0 SHEET 2 BB 5 ALA B 48 ALA B 55 -1 O VAL B 50 N CYS B 20 SHEET 3 BB 5 GLY B 114 ALA B 122 -1 O GLY B 114 N ALA B 55 SHEET 4 BB 5 GLY B 77 ILE B 81 -1 O SER B 78 N SER B 121 SHEET 5 BB 5 TYR B 89 VAL B 91 -1 O TYR B 89 N LEU B 79 SHEET 1 BC 3 PHE B 19 VAL B 22 0 SHEET 2 BC 3 ALA B 48 ALA B 55 -1 O VAL B 50 N CYS B 20 SHEET 3 BC 3 VAL B 141 ALA B 143 -1 O ARG B 142 N ASP B 54 SHEET 1 BD 2 GLY B 24 ASP B 27 0 SHEET 2 BD 2 PHE B 38 THR B 41 -1 O PHE B 38 N ASP B 27 SSBOND 1 CYS A 20 CYS A 146 1555 1555 2.06 SSBOND 2 CYS B 20 CYS B 146 1555 1555 2.03 LINK OE1 GLN A 13 CA CA A1148 1555 1555 2.34 LINK OE1 GLU A 14 CA CA A1148 1555 1555 2.44 LINK OE2 GLU A 14 CA CA A1148 1555 1555 2.48 LINK O THR A 34 CA CA A1148 1555 1555 2.34 LINK O GLY A 37 CA CA A1148 1555 1555 2.49 LINK OD1 ASN A 40 NA NA A1149 1555 1555 2.24 LINK O THR A 41 NA NA A1149 1555 1555 2.52 LINK O ASP A 132 CA CA A1148 1555 1555 2.42 LINK OD1 ASP A 132 CA CA A1148 1555 1555 2.49 LINK NA NA A1149 O HOH A2088 1555 1555 2.26 LINK NA NA A1149 O HOH A2193 1555 1555 2.34 LINK NA NA A1149 O HOH A2195 1555 1555 2.56 LINK NA NA A1149 O HOH A2197 1555 1555 2.54 LINK OE1 GLN B 13 CA CA B1148 1555 1555 2.25 LINK OE1 GLU B 14 CA CA B1148 1555 1555 2.41 LINK OE2 GLU B 14 CA CA B1148 1555 1555 2.51 LINK O THR B 34 CA CA B1148 1555 1555 2.34 LINK O GLY B 37 CA CA B1148 1555 1555 2.44 LINK OD1 ASN B 40 NA NA B1149 1555 1555 2.27 LINK O THR B 41 NA NA B1149 1555 1555 2.39 LINK O ASP B 132 CA CA B1148 1555 1555 2.42 LINK OD1 ASP B 132 CA CA B1148 1555 1555 2.45 LINK NA NA B1149 O HOH B2081 1555 1555 2.30 LINK NA NA B1149 O HOH B2180 1555 1555 2.34 LINK NA NA B1149 O HOH B2182 1555 1555 2.58 LINK NA NA B1149 O HOH B2183 1555 1555 2.59 CISPEP 1 GLY B 87 ASN B 88 0 -3.26 SITE 1 AC1 5 GLN A 13 GLU A 14 THR A 34 GLY A 37 SITE 2 AC1 5 ASP A 132 SITE 1 AC2 5 GLN B 13 GLU B 14 THR B 34 GLY B 37 SITE 2 AC2 5 ASP B 132 SITE 1 AC3 6 ASN B 40 THR B 41 HOH B2081 HOH B2180 SITE 2 AC3 6 HOH B2182 HOH B2183 SITE 1 AC4 7 ASN A 40 THR A 41 ASN A 43 HOH A2088 SITE 2 AC4 7 HOH A2193 HOH A2195 HOH A2197 CRYST1 28.216 46.135 49.006 71.61 89.78 82.19 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035441 -0.004861 0.001486 0.00000 SCALE2 0.000000 0.021878 -0.007336 0.00000 SCALE3 0.000000 0.000000 0.021522 0.00000