data_2W9Y # _entry.id 2W9Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2W9Y PDBE EBI-38684 WWPDB D_1290038684 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2W9Y _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-01-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jordanova, R.' 1 'Groves, M.R.' 2 'Tucker, P.A.' 3 # _citation.id primary _citation.title 'Fatty Acid and Retinoid Binding Proteins Have Distinct Binding Pockets for the Two Types of Cargo' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 35818 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19828452 _citation.pdbx_database_id_DOI 10.1074/JBC.M109.022731 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jordanova, R.' 1 primary 'Groves, M.R.' 2 primary 'Kostova, E.B.' 3 primary 'Woltersdorf, C.' 4 primary 'Liebau, E.' 5 primary 'Tucker, P.A.' 6 # _cell.entry_id 2W9Y _cell.length_a 33.850 _cell.length_b 41.600 _cell.length_c 101.740 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W9Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FATTY ACID/RETINOL BINDING PROTEIN PROTEIN 7, ISOFORM A, CONFIRMED BY TRANSCRIPT EVIDENCE' 15542.728 1 ? ? ? 'RESIDUES GA (N-TERMINUS) ARE FROM THE HIS TAG, C9 IS CSX (CYSTEINE SULFENIC ACID)' 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 181 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CE-FAR-7 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAMSVASLPE(CSX)VKNFFPTEQLEFSSSITADEKPVLHEVFQKHSCFSQCGEMIDEVSKKHPELGKRLATVLEGNKKR LDGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKRLHQEFQSLSSEDQAALRKNNPDIKF ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMSVASLPECVKNFFPTEQLEFSSSITADEKPVLHEVFQKHSCFSQCGEMIDEVSKKHPELGKRLATVLEGNKKRLDGL SPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKRLHQEFQSLSSEDQAALRKNNPDIKF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 SER n 1 5 VAL n 1 6 ALA n 1 7 SER n 1 8 LEU n 1 9 PRO n 1 10 GLU n 1 11 CSX n 1 12 VAL n 1 13 LYS n 1 14 ASN n 1 15 PHE n 1 16 PHE n 1 17 PRO n 1 18 THR n 1 19 GLU n 1 20 GLN n 1 21 LEU n 1 22 GLU n 1 23 PHE n 1 24 SER n 1 25 SER n 1 26 SER n 1 27 ILE n 1 28 THR n 1 29 ALA n 1 30 ASP n 1 31 GLU n 1 32 LYS n 1 33 PRO n 1 34 VAL n 1 35 LEU n 1 36 HIS n 1 37 GLU n 1 38 VAL n 1 39 PHE n 1 40 GLN n 1 41 LYS n 1 42 HIS n 1 43 SER n 1 44 CYS n 1 45 PHE n 1 46 SER n 1 47 GLN n 1 48 CYS n 1 49 GLY n 1 50 GLU n 1 51 MET n 1 52 ILE n 1 53 ASP n 1 54 GLU n 1 55 VAL n 1 56 SER n 1 57 LYS n 1 58 LYS n 1 59 HIS n 1 60 PRO n 1 61 GLU n 1 62 LEU n 1 63 GLY n 1 64 LYS n 1 65 ARG n 1 66 LEU n 1 67 ALA n 1 68 THR n 1 69 VAL n 1 70 LEU n 1 71 GLU n 1 72 GLY n 1 73 ASN n 1 74 LYS n 1 75 LYS n 1 76 ARG n 1 77 LEU n 1 78 ASP n 1 79 GLY n 1 80 LEU n 1 81 SER n 1 82 PRO n 1 83 ALA n 1 84 ALA n 1 85 VAL n 1 86 GLU n 1 87 TYR n 1 88 ALA n 1 89 LYS n 1 90 LYS n 1 91 LEU n 1 92 ILE n 1 93 HIS n 1 94 MET n 1 95 VAL n 1 96 THR n 1 97 THR n 1 98 THR n 1 99 LEU n 1 100 CYS n 1 101 SER n 1 102 LEU n 1 103 THR n 1 104 VAL n 1 105 GLY n 1 106 LYS n 1 107 PRO n 1 108 ILE n 1 109 ASP n 1 110 ASP n 1 111 ALA n 1 112 ASP n 1 113 ALA n 1 114 LYS n 1 115 ARG n 1 116 LEU n 1 117 HIS n 1 118 GLN n 1 119 GLU n 1 120 PHE n 1 121 GLN n 1 122 SER n 1 123 LEU n 1 124 SER n 1 125 SER n 1 126 GLU n 1 127 ASP n 1 128 GLN n 1 129 ALA n 1 130 ALA n 1 131 LEU n 1 132 ARG n 1 133 LYS n 1 134 ASN n 1 135 ASN n 1 136 PRO n 1 137 ASP n 1 138 ILE n 1 139 LYS n 1 140 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'CAENORHABDITIS ELEGANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PETM-11-LIC _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2W9Y 1 ? ? 2W9Y ? 2 UNP Q9TZ51_CAEEL 1 ? ? Q9TZ51 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2W9Y A 1 ? 2 ? 2W9Y -1 ? 0 ? -1 0 2 2 2W9Y A 3 ? 140 ? Q9TZ51 1 ? 138 ? 1 138 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSX 'L-peptide linking' n 'S-OXY CYSTEINE' ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2W9Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46 _exptl_crystal.description 'THIS IS THE NATIVE DATASET, USED FOR THE REFINEMENT. THE STRUCTURE WAS SOLVED WITH SESAD FROM THE ADDITIONAL DATASET, GIVEN BELOW.' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20MM TRIS PH 7.8-8.5, 2.1-2.9M AMMONIUM SULFATE' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2008-06-15 'PT COATED MIRRORS IN KB GEOMETRY' 2 CCD 'ADSC CCD' ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'SI (111)' 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.8726 1.0 2 0.97926 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'ESRF BEAMLINE ID23-2' ESRF ID23-2 0.8726 ? 2 SYNCHROTRON 'ESRF BEAMLINE ID29' ESRF ID29 0.97926 ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2W9Y _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.79 _reflns.number_obs 13757 _reflns.number_all ? _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.13 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 94.6 _reflns_shell.Rmerge_I_obs 0.59 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.19 _reflns_shell.pdbx_redundancy 3.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2W9Y _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13156 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.90 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.171 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 690 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 18.44 _refine.aniso_B[1][1] -0.76000 _refine.aniso_B[2][2] -0.16000 _refine.aniso_B[3][3] 0.93000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 42, 43, 44 AND 45 ARE DISORDERED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.275 _refine.pdbx_overall_ESU_R_Free 0.143 _refine.overall_SU_ML 0.092 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.542 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1055 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 1246 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 50.90 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1118 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.676 2.000 ? 1513 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.725 5.000 ? 145 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.541 25.652 ? 46 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.615 15.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 30.735 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.124 0.200 ? 172 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.021 ? 820 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.695 1.500 ? 704 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.608 2.000 ? 1143 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.099 3.000 ? 414 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.150 4.500 ? 366 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.85 _refine_ls_shell.number_reflns_R_work 933 _refine_ls_shell.R_factor_R_work 0.2260 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3030 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2W9Y _struct.title 'The structure of the lipid binding protein Ce-FAR-7 from Caenorhabditis elegans' _struct.pdbx_descriptor 'FATTY ACID/RETINOL BINDING PROTEIN PROTEIN 7, ISOFORM A, CONFIRMED BY TRANSCRIPT EVIDENCE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2W9Y _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text 'LIPID TRANSPORT, FATTY ACID AND RETINOID BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? LEU A 8 ? SER A 2 LEU A 6 5 ? 5 HELX_P HELX_P2 2 GLU A 10 ? PHE A 15 ? GLU A 8 PHE A 13 5 ? 6 HELX_P HELX_P3 3 THR A 18 ? SER A 26 ? THR A 16 SER A 24 1 ? 9 HELX_P HELX_P4 4 ALA A 29 ? LYS A 41 ? ALA A 27 LYS A 39 1 ? 13 HELX_P HELX_P5 5 GLY A 49 ? LYS A 58 ? GLY A 47 LYS A 56 1 ? 10 HELX_P HELX_P6 6 PRO A 60 ? LEU A 77 ? PRO A 58 LEU A 75 1 ? 18 HELX_P HELX_P7 7 PRO A 82 ? VAL A 104 ? PRO A 80 VAL A 102 1 ? 23 HELX_P HELX_P8 8 ASP A 110 ? SER A 122 ? ASP A 108 SER A 120 1 ? 13 HELX_P HELX_P9 9 SER A 125 ? ASN A 135 ? SER A 123 ASN A 133 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 10 C ? ? ? 1_555 A CSX 11 N ? ? A GLU 8 A CSX 9 1_555 ? ? ? ? ? ? ? 1.340 ? covale2 covale ? ? A CSX 11 C ? ? ? 1_555 A VAL 12 N ? ? A CSX 9 A VAL 10 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 1139' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A 1140' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 GLY A 1 ? GLY A -1 . ? 1_555 ? 2 AC1 8 SER A 4 ? SER A 2 . ? 1_555 ? 3 AC1 8 ALA A 6 ? ALA A 4 . ? 1_555 ? 4 AC1 8 LYS A 75 ? LYS A 73 . ? 1_655 ? 5 AC1 8 SER A 124 ? SER A 122 . ? 3_545 ? 6 AC1 8 SER A 125 ? SER A 123 . ? 3_545 ? 7 AC1 8 HOH D . ? HOH A 2178 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 2179 . ? 1_555 ? 9 AC2 7 LYS A 90 ? LYS A 88 . ? 1_555 ? 10 AC2 7 ARG A 115 ? ARG A 113 . ? 1_555 ? 11 AC2 7 GLU A 119 ? GLU A 117 . ? 1_555 ? 12 AC2 7 LYS A 139 ? LYS A 137 . ? 3_555 ? 13 AC2 7 HOH D . ? HOH A 2132 . ? 1_555 ? 14 AC2 7 HOH D . ? HOH A 2138 . ? 1_555 ? 15 AC2 7 HOH D . ? HOH A 2181 . ? 1_555 ? # _database_PDB_matrix.entry_id 2W9Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2W9Y _atom_sites.fract_transf_matrix[1][1] 0.029542 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024038 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009829 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 ALA 2 0 0 ALA ALA A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 SER 4 2 2 SER SER A . n A 1 5 VAL 5 3 3 VAL VAL A . n A 1 6 ALA 6 4 4 ALA ALA A . n A 1 7 SER 7 5 5 SER SER A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 PRO 9 7 7 PRO PRO A . n A 1 10 GLU 10 8 8 GLU GLU A . n A 1 11 CSX 11 9 9 CSX CSX A . n A 1 12 VAL 12 10 10 VAL VAL A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 PHE 15 13 13 PHE PHE A . n A 1 16 PHE 16 14 14 PHE PHE A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 GLU 19 17 17 GLU GLU A . n A 1 20 GLN 20 18 18 GLN GLN A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 GLU 22 20 20 GLU GLU A . n A 1 23 PHE 23 21 21 PHE PHE A . n A 1 24 SER 24 22 22 SER SER A . n A 1 25 SER 25 23 23 SER SER A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 THR 28 26 26 THR THR A . n A 1 29 ALA 29 27 27 ALA ALA A . n A 1 30 ASP 30 28 28 ASP ASP A . n A 1 31 GLU 31 29 29 GLU GLU A . n A 1 32 LYS 32 30 30 LYS LYS A . n A 1 33 PRO 33 31 31 PRO PRO A . n A 1 34 VAL 34 32 32 VAL VAL A . n A 1 35 LEU 35 33 33 LEU LEU A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 GLU 37 35 35 GLU GLU A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 PHE 39 37 37 PHE PHE A . n A 1 40 GLN 40 38 38 GLN GLN A . n A 1 41 LYS 41 39 39 LYS LYS A . n A 1 42 HIS 42 40 40 HIS HIS A . n A 1 43 SER 43 41 41 SER SER A . n A 1 44 CYS 44 42 ? ? ? A . n A 1 45 PHE 45 43 ? ? ? A . n A 1 46 SER 46 44 ? ? ? A . n A 1 47 GLN 47 45 ? ? ? A . n A 1 48 CYS 48 46 46 CYS CYS A . n A 1 49 GLY 49 47 47 GLY GLY A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 MET 51 49 49 MET MET A . n A 1 52 ILE 52 50 50 ILE ILE A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 VAL 55 53 53 VAL VAL A . n A 1 56 SER 56 54 54 SER SER A . n A 1 57 LYS 57 55 55 LYS LYS A . n A 1 58 LYS 58 56 56 LYS LYS A . n A 1 59 HIS 59 57 57 HIS HIS A . n A 1 60 PRO 60 58 58 PRO PRO A . n A 1 61 GLU 61 59 59 GLU GLU A . n A 1 62 LEU 62 60 60 LEU LEU A . n A 1 63 GLY 63 61 61 GLY GLY A . n A 1 64 LYS 64 62 62 LYS LYS A . n A 1 65 ARG 65 63 63 ARG ARG A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 ALA 67 65 65 ALA ALA A . n A 1 68 THR 68 66 66 THR THR A . n A 1 69 VAL 69 67 67 VAL VAL A . n A 1 70 LEU 70 68 68 LEU LEU A . n A 1 71 GLU 71 69 69 GLU GLU A . n A 1 72 GLY 72 70 70 GLY GLY A . n A 1 73 ASN 73 71 71 ASN ASN A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 LYS 75 73 73 LYS LYS A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 ASP 78 76 76 ASP ASP A . n A 1 79 GLY 79 77 77 GLY GLY A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 SER 81 79 79 SER SER A . n A 1 82 PRO 82 80 80 PRO PRO A . n A 1 83 ALA 83 81 81 ALA ALA A . n A 1 84 ALA 84 82 82 ALA ALA A . n A 1 85 VAL 85 83 83 VAL VAL A . n A 1 86 GLU 86 84 84 GLU GLU A . n A 1 87 TYR 87 85 85 TYR TYR A . n A 1 88 ALA 88 86 86 ALA ALA A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 LYS 90 88 88 LYS LYS A . n A 1 91 LEU 91 89 89 LEU LEU A . n A 1 92 ILE 92 90 90 ILE ILE A . n A 1 93 HIS 93 91 91 HIS HIS A . n A 1 94 MET 94 92 92 MET MET A . n A 1 95 VAL 95 93 93 VAL VAL A . n A 1 96 THR 96 94 94 THR THR A . n A 1 97 THR 97 95 95 THR THR A . n A 1 98 THR 98 96 96 THR THR A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 CYS 100 98 98 CYS CYS A . n A 1 101 SER 101 99 99 SER SER A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 VAL 104 102 102 VAL VAL A . n A 1 105 GLY 105 103 103 GLY GLY A . n A 1 106 LYS 106 104 104 LYS LYS A . n A 1 107 PRO 107 105 105 PRO PRO A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 ASP 109 107 107 ASP ASP A . n A 1 110 ASP 110 108 108 ASP ASP A . n A 1 111 ALA 111 109 109 ALA ALA A . n A 1 112 ASP 112 110 110 ASP ASP A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 LYS 114 112 112 LYS LYS A . n A 1 115 ARG 115 113 113 ARG ARG A . n A 1 116 LEU 116 114 114 LEU LEU A . n A 1 117 HIS 117 115 115 HIS HIS A . n A 1 118 GLN 118 116 116 GLN GLN A . n A 1 119 GLU 119 117 117 GLU GLU A . n A 1 120 PHE 120 118 118 PHE PHE A . n A 1 121 GLN 121 119 119 GLN GLN A . n A 1 122 SER 122 120 120 SER SER A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 SER 124 122 122 SER SER A . n A 1 125 SER 125 123 123 SER SER A . n A 1 126 GLU 126 124 124 GLU GLU A . n A 1 127 ASP 127 125 125 ASP ASP A . n A 1 128 GLN 128 126 126 GLN GLN A . n A 1 129 ALA 129 127 127 ALA ALA A . n A 1 130 ALA 130 128 128 ALA ALA A . n A 1 131 LEU 131 129 129 LEU LEU A . n A 1 132 ARG 132 130 130 ARG ARG A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 ASN 134 132 132 ASN ASN A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 PRO 136 134 134 PRO PRO A . n A 1 137 ASP 137 135 135 ASP ASP A . n A 1 138 ILE 138 136 136 ILE ILE A . n A 1 139 LYS 139 137 137 LYS LYS A . n A 1 140 PHE 140 138 138 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1139 1139 SO4 SO4 A . C 2 SO4 1 1140 1140 SO4 SO4 A . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . D 3 HOH 45 2045 2045 HOH HOH A . D 3 HOH 46 2046 2046 HOH HOH A . D 3 HOH 47 2047 2047 HOH HOH A . D 3 HOH 48 2048 2048 HOH HOH A . D 3 HOH 49 2049 2049 HOH HOH A . D 3 HOH 50 2050 2050 HOH HOH A . D 3 HOH 51 2051 2051 HOH HOH A . D 3 HOH 52 2052 2052 HOH HOH A . D 3 HOH 53 2053 2053 HOH HOH A . D 3 HOH 54 2054 2054 HOH HOH A . D 3 HOH 55 2055 2055 HOH HOH A . D 3 HOH 56 2056 2056 HOH HOH A . D 3 HOH 57 2057 2057 HOH HOH A . D 3 HOH 58 2058 2058 HOH HOH A . D 3 HOH 59 2059 2059 HOH HOH A . D 3 HOH 60 2060 2060 HOH HOH A . D 3 HOH 61 2061 2061 HOH HOH A . D 3 HOH 62 2062 2062 HOH HOH A . D 3 HOH 63 2063 2063 HOH HOH A . D 3 HOH 64 2064 2064 HOH HOH A . D 3 HOH 65 2065 2065 HOH HOH A . D 3 HOH 66 2066 2066 HOH HOH A . D 3 HOH 67 2067 2067 HOH HOH A . D 3 HOH 68 2068 2068 HOH HOH A . D 3 HOH 69 2069 2069 HOH HOH A . D 3 HOH 70 2070 2070 HOH HOH A . D 3 HOH 71 2071 2071 HOH HOH A . D 3 HOH 72 2072 2072 HOH HOH A . D 3 HOH 73 2073 2073 HOH HOH A . D 3 HOH 74 2074 2074 HOH HOH A . D 3 HOH 75 2075 2075 HOH HOH A . D 3 HOH 76 2076 2076 HOH HOH A . D 3 HOH 77 2077 2077 HOH HOH A . D 3 HOH 78 2078 2078 HOH HOH A . D 3 HOH 79 2079 2079 HOH HOH A . D 3 HOH 80 2080 2080 HOH HOH A . D 3 HOH 81 2081 2081 HOH HOH A . D 3 HOH 82 2082 2082 HOH HOH A . D 3 HOH 83 2083 2083 HOH HOH A . D 3 HOH 84 2084 2084 HOH HOH A . D 3 HOH 85 2085 2085 HOH HOH A . D 3 HOH 86 2086 2086 HOH HOH A . D 3 HOH 87 2087 2087 HOH HOH A . D 3 HOH 88 2088 2088 HOH HOH A . D 3 HOH 89 2089 2089 HOH HOH A . D 3 HOH 90 2090 2090 HOH HOH A . D 3 HOH 91 2091 2091 HOH HOH A . D 3 HOH 92 2092 2092 HOH HOH A . D 3 HOH 93 2093 2093 HOH HOH A . D 3 HOH 94 2094 2094 HOH HOH A . D 3 HOH 95 2095 2095 HOH HOH A . D 3 HOH 96 2096 2096 HOH HOH A . D 3 HOH 97 2097 2097 HOH HOH A . D 3 HOH 98 2098 2098 HOH HOH A . D 3 HOH 99 2099 2099 HOH HOH A . D 3 HOH 100 2100 2100 HOH HOH A . D 3 HOH 101 2101 2101 HOH HOH A . D 3 HOH 102 2102 2102 HOH HOH A . D 3 HOH 103 2103 2103 HOH HOH A . D 3 HOH 104 2104 2104 HOH HOH A . D 3 HOH 105 2105 2105 HOH HOH A . D 3 HOH 106 2106 2106 HOH HOH A . D 3 HOH 107 2107 2107 HOH HOH A . D 3 HOH 108 2108 2108 HOH HOH A . D 3 HOH 109 2109 2109 HOH HOH A . D 3 HOH 110 2110 2110 HOH HOH A . D 3 HOH 111 2111 2111 HOH HOH A . D 3 HOH 112 2112 2112 HOH HOH A . D 3 HOH 113 2113 2113 HOH HOH A . D 3 HOH 114 2114 2114 HOH HOH A . D 3 HOH 115 2115 2115 HOH HOH A . D 3 HOH 116 2116 2116 HOH HOH A . D 3 HOH 117 2117 2117 HOH HOH A . D 3 HOH 118 2118 2118 HOH HOH A . D 3 HOH 119 2119 2119 HOH HOH A . D 3 HOH 120 2120 2120 HOH HOH A . D 3 HOH 121 2121 2121 HOH HOH A . D 3 HOH 122 2122 2122 HOH HOH A . D 3 HOH 123 2123 2123 HOH HOH A . D 3 HOH 124 2124 2124 HOH HOH A . D 3 HOH 125 2125 2125 HOH HOH A . D 3 HOH 126 2126 2126 HOH HOH A . D 3 HOH 127 2127 2127 HOH HOH A . D 3 HOH 128 2128 2128 HOH HOH A . D 3 HOH 129 2129 2129 HOH HOH A . D 3 HOH 130 2130 2130 HOH HOH A . D 3 HOH 131 2131 2131 HOH HOH A . D 3 HOH 132 2132 2132 HOH HOH A . D 3 HOH 133 2133 2133 HOH HOH A . D 3 HOH 134 2134 2134 HOH HOH A . D 3 HOH 135 2135 2135 HOH HOH A . D 3 HOH 136 2136 2136 HOH HOH A . D 3 HOH 137 2137 2137 HOH HOH A . D 3 HOH 138 2138 2138 HOH HOH A . D 3 HOH 139 2139 2139 HOH HOH A . D 3 HOH 140 2140 2140 HOH HOH A . D 3 HOH 141 2141 2141 HOH HOH A . D 3 HOH 142 2142 2142 HOH HOH A . D 3 HOH 143 2143 2143 HOH HOH A . D 3 HOH 144 2144 2144 HOH HOH A . D 3 HOH 145 2145 2145 HOH HOH A . D 3 HOH 146 2146 2146 HOH HOH A . D 3 HOH 147 2147 2147 HOH HOH A . D 3 HOH 148 2148 2148 HOH HOH A . D 3 HOH 149 2149 2149 HOH HOH A . D 3 HOH 150 2150 2150 HOH HOH A . D 3 HOH 151 2151 2151 HOH HOH A . D 3 HOH 152 2152 2152 HOH HOH A . D 3 HOH 153 2153 2153 HOH HOH A . D 3 HOH 154 2154 2154 HOH HOH A . D 3 HOH 155 2155 2155 HOH HOH A . D 3 HOH 156 2156 2156 HOH HOH A . D 3 HOH 157 2157 2157 HOH HOH A . D 3 HOH 158 2158 2158 HOH HOH A . D 3 HOH 159 2159 2159 HOH HOH A . D 3 HOH 160 2160 2160 HOH HOH A . D 3 HOH 161 2161 2161 HOH HOH A . D 3 HOH 162 2162 2162 HOH HOH A . D 3 HOH 163 2163 2163 HOH HOH A . D 3 HOH 164 2164 2164 HOH HOH A . D 3 HOH 165 2165 2165 HOH HOH A . D 3 HOH 166 2166 2166 HOH HOH A . D 3 HOH 167 2167 2167 HOH HOH A . D 3 HOH 168 2168 2168 HOH HOH A . D 3 HOH 169 2169 2169 HOH HOH A . D 3 HOH 170 2170 2170 HOH HOH A . D 3 HOH 171 2171 2171 HOH HOH A . D 3 HOH 172 2172 2172 HOH HOH A . D 3 HOH 173 2173 2173 HOH HOH A . D 3 HOH 174 2174 2174 HOH HOH A . D 3 HOH 175 2175 2175 HOH HOH A . D 3 HOH 176 2176 2176 HOH HOH A . D 3 HOH 177 2177 2177 HOH HOH A . D 3 HOH 178 2178 2178 HOH HOH A . D 3 HOH 179 2179 2179 HOH HOH A . D 3 HOH 180 2180 2180 HOH HOH A . D 3 HOH 181 2181 2181 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSX _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSX _pdbx_struct_mod_residue.auth_seq_id 9 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'S-OXY CYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-20 2 'Structure model' 1 1 2015-04-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 2 'Structure model' 'Source and taxonomy' 5 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -0.6510 22.1020 17.3010 0.0083 0.0118 0.0605 0.0017 -0.0016 0.0030 0.4756 0.3315 0.3235 -0.0085 -0.2154 0.2478 -0.0048 0.0295 0.0292 0.0046 0.0070 0.0128 0.0033 0.0124 -0.0022 'X-RAY DIFFRACTION' 2 ? refined 7.8220 19.0910 0.0870 0.0384 0.0304 0.0589 -0.0196 -0.0113 0.0189 3.9327 1.4304 3.5432 0.5885 0.0763 0.8947 -0.1237 0.3219 0.3098 -0.1929 0.0961 0.0132 -0.3024 0.0984 0.0276 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -1 ? ? A 27 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 57 ? ? A 138 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 A 28 ? ? A 41 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 46 ? ? A 56 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0066 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 autoSHARP phasing . ? 4 # _pdbx_database_remark.id 650 _pdbx_database_remark.text ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 2W9Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;GA IN THE N-TERMINUS ARE FROM THE HIS TAG, THESE RESIDUES ARE NOT IN Q9TZ51 ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 117 ? B O A HOH 2139 ? ? 1.61 2 1 OE1 A GLU 117 ? A O A HOH 2138 ? ? 2.00 3 1 O A HOH 2101 ? ? O A HOH 2150 ? ? 2.03 4 1 O3 A SO4 1140 ? ? O A HOH 2181 ? ? 2.07 5 1 CD2 A HIS 34 ? ? O A HOH 2117 ? ? 2.09 6 1 O A HOH 2034 ? ? O A HOH 2114 ? ? 2.18 7 1 NZ A LYS 88 ? ? OE2 A GLU 117 ? A 2.19 8 1 O A SER 120 ? ? O A HOH 2142 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 63 ? ? CZ A ARG 63 ? ? NH1 A ARG 63 ? ? 123.82 120.30 3.52 0.50 N 2 1 NE A ARG 63 ? ? CZ A ARG 63 ? ? NH2 A ARG 63 ? ? 115.20 120.30 -5.10 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 57 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -161.08 _pdbx_validate_torsion.psi 93.50 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2006 ? 6.49 . 2 1 O ? A HOH 2007 ? 6.55 . 3 1 O ? A HOH 2020 ? 6.04 . 4 1 O ? A HOH 2021 ? 6.04 . 5 1 O ? A HOH 2046 ? 6.93 . 6 1 O ? A HOH 2065 ? 5.88 . 7 1 O ? A HOH 2072 ? 6.47 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A CYS 42 ? A CYS 44 2 1 Y 1 A PHE 43 ? A PHE 45 3 1 Y 1 A SER 44 ? A SER 46 4 1 Y 1 A GLN 45 ? A GLN 47 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #