HEADER HYDROLASE 27-FEB-09 2WBF TITLE CRYSTAL STRUCTURE ANALYSIS OF SERA5E FROM PLASMODIUM FALCIPARUM WITH TITLE 2 LOOP 690-700 ORDERED COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE-REPEAT ANTIGEN PROTEIN; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: SERINE-PROTEASE DOMAIN, RESIDUES 555-819; COMPND 5 SYNONYM: 111 KDA ANTIGEN, P126, SERA5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE; SOURCE 4 ORGANISM_TAXID: 5833; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SERINE REPEAT ANTIGEN, SERA, MALARIA, VACUOLE, PROTEASE, CATHEPSIN, KEYWDS 2 HYDROLASE, PLASMODIUM, GLYCOPROTEIN, THIOL PROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR B.J.SMITH,R.L.MALBY,P.M.COLMAN,O.B.CLARKE REVDAT 5 09-OCT-24 2WBF 1 REMARK REVDAT 4 13-DEC-23 2WBF 1 REMARK LINK REVDAT 3 29-MAY-19 2WBF 1 REMARK REVDAT 2 25-APR-18 2WBF 1 SOURCE JRNL ATOM REVDAT 1 31-MAR-09 2WBF 0 JRNL AUTH A.N.HODDER,R.L.MALBY,O.B.CLARKE,W.D.FAIRLIE,P.M.COLMAN, JRNL AUTH 2 B.S.CRABB,B.J.SMITH JRNL TITL STRUCTURAL INSIGHTS INTO THE PROTEASE-LIKE ANTIGEN JRNL TITL 2 PLASMODIUM FALCIPARUM SERA5 AND ITS NONCANONICAL ACTIVE-SITE JRNL TITL 3 SERINE. JRNL REF J. MOL. BIOL. V. 392 154 2009 JRNL REFN ESSN 1089-8638 JRNL PMID 19591843 JRNL DOI 10.1016/J.JMB.2009.07.007 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 36700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5538 - 3.7598 1.00 2684 119 0.1431 0.1625 REMARK 3 2 3.7598 - 2.9852 1.00 2707 154 0.1240 0.1434 REMARK 3 3 2.9852 - 2.6081 1.00 2654 165 0.1381 0.1761 REMARK 3 4 2.6081 - 2.3697 1.00 2663 135 0.1363 0.1599 REMARK 3 5 2.3697 - 2.1999 1.00 2712 136 0.1311 0.1757 REMARK 3 6 2.1999 - 2.0703 1.00 2732 119 0.1360 0.1861 REMARK 3 7 2.0703 - 1.9666 1.00 2661 167 0.1416 0.1785 REMARK 3 8 1.9666 - 1.8810 1.00 2657 164 0.1524 0.1740 REMARK 3 9 1.8810 - 1.8086 1.00 2682 141 0.1684 0.2170 REMARK 3 10 1.8086 - 1.7462 1.00 2728 135 0.1921 0.2077 REMARK 3 11 1.7462 - 1.6916 1.00 2664 140 0.2082 0.2415 REMARK 3 12 1.6916 - 1.6433 1.00 2683 147 0.2345 0.2562 REMARK 3 13 1.6433 - 1.6000 0.98 2632 119 0.2390 0.2384 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 56.89 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.670 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00030 REMARK 3 B22 (A**2) : 0.00030 REMARK 3 B33 (A**2) : -0.00070 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4160 REMARK 3 ANGLE : 0.833 7433 REMARK 3 CHIRALITY : 0.076 302 REMARK 3 PLANARITY : 0.004 670 REMARK 3 DIHEDRAL : 14.826 986 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN X AND RESID 563:685 REMARK 3 ORIGIN FOR THE GROUP (A): 25.8707 -5.8446 3.9337 REMARK 3 T TENSOR REMARK 3 T11: 0.0260 T22: 0.0360 REMARK 3 T33: 0.0315 T12: 0.0097 REMARK 3 T13: -0.0043 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.5602 L22: 0.2000 REMARK 3 L33: 0.9235 L12: 0.0948 REMARK 3 L13: -0.4326 L23: -0.3473 REMARK 3 S TENSOR REMARK 3 S11: 0.0378 S12: 0.1400 S13: 0.0659 REMARK 3 S21: -0.0794 S22: 0.0031 S23: 0.0667 REMARK 3 S31: -0.0169 S32: -0.1306 S33: 0.0027 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN X AND RESID 686:827 REMARK 3 ORIGIN FOR THE GROUP (A): 31.3736 -18.0687 16.8156 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.0076 REMARK 3 T33: 0.0246 T12: 0.0068 REMARK 3 T13: 0.0200 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.3847 L22: 0.8166 REMARK 3 L33: 0.7800 L12: 0.0242 REMARK 3 L13: -0.0170 L23: 0.1746 REMARK 3 S TENSOR REMARK 3 S11: -0.0535 S12: -0.0453 S13: -0.0588 REMARK 3 S21: 0.0939 S22: -0.0015 S23: 0.0085 REMARK 3 S31: 0.1718 S32: 0.0043 S33: -0.0016 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1290038905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95667 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36811 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CH2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG3350,0.2M CACL2, 5% DMSO, 10MM REMARK 280 BIS-TRIS PH 6.5, 10MM NACL, SITTING-DROP VAPOUR-DIFFUSION, VAPOR REMARK 280 DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.18000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.54879 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.80000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 51.18000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 29.54879 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.80000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 51.18000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 29.54879 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 23.80000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.09757 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 47.60000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 59.09757 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 47.60000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 59.09757 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 47.60000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP X 563 CB CG OD1 OD2 REMARK 470 ASN X 564 CG OD1 ND2 REMARK 470 LYS X 569 CD CE NZ REMARK 470 GLU X 570 CG CD OE1 OE2 REMARK 470 LYS X 576 CE NZ REMARK 470 GLU X 578 CB CG CD OE1 OE2 REMARK 470 ASN X 579 CB CG OD1 ND2 REMARK 470 GLN X 647 CD OE1 NE2 REMARK 470 GLN X 671 CD OE1 NE2 REMARK 470 ASN X 685 CG OD1 ND2 REMARK 470 LYS X 687 CD CE NZ REMARK 470 GLU X 694 CG CD OE1 OE2 REMARK 470 ARG X 710 CZ NH1 NH2 REMARK 470 HIS X 712 CG ND1 CD2 CE1 NE2 REMARK 470 LYS X 720 CD CE NZ REMARK 470 GLU X 776 CG CD OE1 OE2 REMARK 470 LYS X 779 CE NZ REMARK 470 ASP X 823 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN X 592 43.99 -102.17 REMARK 500 SER X 640 -110.30 -156.10 REMARK 500 PRO X 695 43.30 -81.14 REMARK 500 ASN X 714 49.89 -147.87 REMARK 500 ASP X 761 12.36 -152.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X1836 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU X 709 OE1 REMARK 620 2 GLU X 709 OE2 50.0 REMARK 620 3 ASP X 758 O 118.5 83.8 REMARK 620 4 ASP X 758 OD1 87.3 116.5 79.7 REMARK 620 5 HOH X2087 O 148.1 159.6 87.9 80.0 REMARK 620 6 HOH X2129 O 69.2 105.1 171.0 96.8 83.3 REMARK 620 7 HOH X2234 O 115.7 80.9 88.2 157.1 80.2 92.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X1829 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU X 739 OE2 REMARK 620 2 ASN X 740 OD1 97.2 REMARK 620 3 ASP X 757 OD1 110.5 91.1 REMARK 620 4 ASP X 757 OD1 91.3 124.8 36.2 REMARK 620 5 ASP X 757 OD2 85.0 75.7 31.6 50.8 REMARK 620 6 ASP X 757 OD2 62.8 96.3 47.7 41.9 28.4 REMARK 620 7 GLY X 777 O 85.4 79.9 162.7 155.3 152.4 147.5 REMARK 620 8 HOH X2165 O 169.8 81.0 79.6 98.0 104.1 127.3 84.4 REMARK 620 9 HOH X2167 O 88.4 161.0 104.0 72.9 123.0 102.4 82.4 90.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1828 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 1829 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL X 1830 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL X 1831 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1832 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL X 1833 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1834 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL X 1835 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 1836 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1837 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1838 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS X 1839 DBREF 2WBF X 563 827 UNP P69193 SERA_PLAFD 555 819 SEQADV 2WBF LYS X 752 UNP P69193 GLN 744 CONFLICT SEQRES 1 X 265 ASP ASN MET PHE CYS ASN LYS GLU TYR CYS ASN ARG LEU SEQRES 2 X 265 LYS ASP GLU ASN ASN CYS ILE SER ASN LEU GLN VAL GLU SEQRES 3 X 265 ASP GLN GLY ASN CYS ASP THR SER TRP ILE PHE ALA SER SEQRES 4 X 265 LYS TYR HIS LEU GLU THR ILE ARG CYS MET LYS GLY TYR SEQRES 5 X 265 GLU PRO THR LYS ILE SER ALA LEU TYR VAL ALA ASN CYS SEQRES 6 X 265 TYR LYS GLY GLU HIS LYS ASP ARG CYS ASP GLU GLY SER SEQRES 7 X 265 SER PRO MET GLU PHE LEU GLN ILE ILE GLU ASP TYR GLY SEQRES 8 X 265 PHE LEU PRO ALA GLU SER ASN TYR PRO TYR ASN TYR VAL SEQRES 9 X 265 LYS VAL GLY GLU GLN CYS PRO LYS VAL GLU ASP HIS TRP SEQRES 10 X 265 MET ASN LEU TRP ASP ASN GLY LYS ILE LEU HIS ASN LYS SEQRES 11 X 265 ASN GLU PRO ASN SER LEU ASP GLY LYS GLY TYR THR ALA SEQRES 12 X 265 TYR GLU SER GLU ARG PHE HIS ASP ASN MET ASP ALA PHE SEQRES 13 X 265 VAL LYS ILE ILE LYS THR GLU VAL MET ASN LYS GLY SER SEQRES 14 X 265 VAL ILE ALA TYR ILE LYS ALA GLU ASN VAL MET GLY TYR SEQRES 15 X 265 GLU PHE SER GLY LYS LYS VAL LYS ASN LEU CYS GLY ASP SEQRES 16 X 265 ASP THR ALA ASP HIS ALA VAL ASN ILE VAL GLY TYR GLY SEQRES 17 X 265 ASN TYR VAL ASN SER GLU GLY GLU LYS LYS SER TYR TRP SEQRES 18 X 265 ILE VAL ARG ASN SER TRP GLY PRO TYR TRP GLY ASP GLU SEQRES 19 X 265 GLY TYR PHE LYS VAL ASP MET TYR GLY PRO THR HIS CYS SEQRES 20 X 265 HIS PHE ASN PHE ILE HIS SER VAL VAL ILE PHE ASN VAL SEQRES 21 X 265 ASP LEU PRO MET ASN HET DMS X1828 10 HET CA X1829 1 HET CL X1830 1 HET CL X1831 1 HET DMS X1832 10 HET CL X1833 1 HET DMS X1834 10 HET CL X1835 1 HET CA X1836 1 HET DMS X1837 10 HET DMS X1838 10 HET DMS X1839 10 HETNAM DMS DIMETHYL SULFOXIDE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 2 DMS 6(C2 H6 O S) FORMUL 3 CA 2(CA 2+) FORMUL 4 CL 4(CL 1-) FORMUL 14 HOH *248(H2 O) HELIX 1 1 ASN X 573 ASP X 577 5 5 HELIX 2 2 CYS X 581 LEU X 585 5 5 HELIX 3 3 THR X 595 LYS X 612 1 18 HELIX 4 4 SER X 620 CYS X 627 1 8 HELIX 5 5 SER X 641 GLY X 653 1 13 HELIX 6 6 ASN X 664 VAL X 668 5 5 HELIX 7 7 GLU X 709 HIS X 712 5 4 HELIX 8 8 ASN X 714 GLY X 730 1 17 HELIX 9 9 LYS X 737 MET X 742 5 6 HELIX 10 10 GLY X 743 GLY X 748 5 6 SHEET 1 XA 2 LYS X 687 ILE X 688 0 SHEET 2 XA 2 VAL X 822 ASP X 823 -1 O ASP X 823 N LYS X 687 SHEET 1 XB 7 TYR X 703 GLU X 707 0 SHEET 2 XB 7 SER X 816 PHE X 820 -1 O VAL X 817 N TYR X 706 SHEET 3 XB 7 VAL X 732 ILE X 736 -1 O ILE X 733 N VAL X 818 SHEET 4 XB 7 HIS X 762 VAL X 773 -1 O HIS X 762 N ILE X 736 SHEET 5 XB 7 LYS X 779 ARG X 786 -1 O LYS X 780 N TYR X 772 SHEET 6 XB 7 TYR X 798 ASP X 802 -1 O PHE X 799 N VAL X 785 SHEET 7 XB 7 VAL X 751 LYS X 752 1 O LYS X 752 N ASP X 802 SSBOND 1 CYS X 567 CYS X 572 1555 1555 2.03 SSBOND 2 CYS X 581 CYS X 610 1555 1555 2.04 SSBOND 3 CYS X 593 CYS X 636 1555 1555 2.05 SSBOND 4 CYS X 627 CYS X 672 1555 1555 2.05 SSBOND 5 CYS X 755 CYS X 809 1555 1555 2.02 LINK OE1 GLU X 709 CA CA X1836 1555 1555 2.64 LINK OE2 GLU X 709 CA CA X1836 1555 1555 2.52 LINK OE2 GLU X 739 CA CA X1829 1555 1555 2.39 LINK OD1 ASN X 740 CA CA X1829 1555 1555 2.37 LINK OD1AASP X 757 CA CA X1829 1555 1555 2.49 LINK OD1BASP X 757 CA CA X1829 1555 1555 2.59 LINK OD2BASP X 757 CA CA X1829 1555 1555 2.49 LINK OD2AASP X 757 CA CA X1829 1555 1555 2.87 LINK O ASP X 758 CA CA X1836 1555 1555 2.32 LINK OD1 ASP X 758 CA CA X1836 1555 1555 2.44 LINK O GLY X 777 CA CA X1829 3655 1555 2.37 LINK CA CA X1829 O HOH X2165 1555 1555 2.56 LINK CA CA X1829 O HOH X2167 1555 1555 2.56 LINK CA CA X1836 O HOH X2087 1555 6555 2.47 LINK CA CA X1836 O HOH X2129 1555 1555 2.48 LINK CA CA X1836 O HOH X2234 1555 1555 2.39 SITE 1 AC1 7 ASP X 589 SER X 641 TYR X 663 ASN X 664 SITE 2 AC1 7 TYR X 665 TYR X 703 HOH X2245 SITE 1 AC2 6 GLU X 739 ASN X 740 ASP X 757 GLY X 777 SITE 2 AC2 6 HOH X2165 HOH X2167 SITE 1 AC3 4 SER X 640 LYS X 667 TYR X 735 HOH X2037 SITE 1 AC4 4 ASP X 634 ARG X 635 CYS X 636 ASP X 637 SITE 1 AC5 4 GLU X 588 ASP X 589 TYR X 663 HOH X2246 SITE 1 AC6 7 LYS X 701 TRP X 789 GLY X 790 PRO X 791 SITE 2 AC6 7 TYR X 792 TRP X 793 HOH X2028 SITE 1 AC7 5 CYS X 809 HIS X 810 ASN X 812 HOH X2247 SITE 2 AC7 5 HOH X2248 SITE 1 AC8 1 ASN X 580 SITE 1 AC9 5 GLU X 709 ASP X 758 HOH X2087 HOH X2129 SITE 2 AC9 5 HOH X2234 SITE 1 BC1 5 ASN X 626 TYR X 628 TYR X 652 CYS X 672 SITE 2 BC1 5 HOH X2076 SITE 1 BC2 3 ARG X 710 ASN X 714 HOH X2133 SITE 1 BC3 6 SER X 747 GLY X 748 LYS X 749 GLY X 794 SITE 2 BC3 6 ASP X 795 HOH X2207 CRYST1 102.360 102.360 71.400 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009769 0.005640 0.000000 0.00000 SCALE2 0.000000 0.011281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014006 0.00000