HEADER CELL ADHESION 05-MAR-09 2WBX TITLE CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN-23; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EC1, RESIDUES 24-124; COMPND 5 SYNONYM: OTOCADHERIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CDH23 ECTODOMAIN 1 (EC1) CONSTRUCT DOES NOT CONTAIN COMPND 8 PREDICTED SIGNAL SEQUENCE. THE N-TEMRINAL METHIONINE IS A CLONING COMPND 9 ARTIFACT. ASPARTATE 102 WAS SELECTED AS THE C-TERMINAL RESIDUE OF COMPND 10 ECTODOMAIN 1 (EC1) AND IS FOLLOWED BY A 6-HIS-TAG. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS CELL ADHESION, HEARING, DEAFNESS EXPDTA X-RAY DIFFRACTION AUTHOR M.SOTOMAYOR,W.WEIHOFEN,R.GAUDET,D.P.COREY REVDAT 4 13-DEC-23 2WBX 1 REMARK LINK REVDAT 3 06-JUN-12 2WBX 1 JRNL REVDAT 2 13-JUL-11 2WBX 1 VERSN REVDAT 1 21-APR-10 2WBX 0 JRNL AUTH M.SOTOMAYOR,W.WEIHOFEN,R.GAUDET,D.P.COREY JRNL TITL STRUCTURAL DETERMINANTS OF CADHERIN-23 FUNCTION IN HEARING JRNL TITL 2 AND DEAFNESS. JRNL REF NEURON V. 66 85 2010 JRNL REFN ISSN 0896-6273 JRNL PMID 20399731 JRNL DOI 10.1016/J.NEURON.2010.03.028 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 15473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 811 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1114 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 815 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 18.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.67000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.559 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 863 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 579 ; 0.011 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1183 ; 1.368 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1412 ; 0.869 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 113 ; 6.036 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;39.557 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 141 ;11.230 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.238 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 135 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 986 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 188 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 527 ; 0.839 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 870 ; 1.569 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 336 ; 2.492 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 307 ; 4.014 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 13 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5685 23.4789 -0.3129 REMARK 3 T TENSOR REMARK 3 T11: 0.0476 T22: 0.0446 REMARK 3 T33: 0.0772 T12: 0.0100 REMARK 3 T13: 0.0142 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 0.7096 L22: 1.5159 REMARK 3 L33: 3.2556 L12: -0.4828 REMARK 3 L13: 0.1123 L23: -1.3539 REMARK 3 S TENSOR REMARK 3 S11: 0.0693 S12: 0.0043 S13: -0.1567 REMARK 3 S21: -0.2142 S22: -0.1839 S23: -0.0841 REMARK 3 S31: 0.1828 S32: 0.1734 S33: 0.1146 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 24 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0762 32.3202 -21.2344 REMARK 3 T TENSOR REMARK 3 T11: 0.2051 T22: 0.2226 REMARK 3 T33: 0.1793 T12: 0.0276 REMARK 3 T13: 0.0170 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.1385 L22: 1.5938 REMARK 3 L33: 1.0686 L12: -0.6861 REMARK 3 L13: -0.3269 L23: 0.7787 REMARK 3 S TENSOR REMARK 3 S11: 0.0982 S12: 0.2680 S13: 0.0673 REMARK 3 S21: -0.3601 S22: -0.0761 S23: -0.0042 REMARK 3 S31: 0.0958 S32: 0.0361 S33: -0.0221 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 39 REMARK 3 ORIGIN FOR THE GROUP (A): -13.2474 29.1407 -9.2696 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.0104 REMARK 3 T33: 0.0547 T12: 0.0069 REMARK 3 T13: -0.0252 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 1.2767 L22: 4.7767 REMARK 3 L33: 5.0547 L12: -1.2798 REMARK 3 L13: 1.2345 L23: -4.6312 REMARK 3 S TENSOR REMARK 3 S11: 0.1797 S12: 0.0615 S13: -0.1372 REMARK 3 S21: -0.4490 S22: -0.1274 S23: 0.2061 REMARK 3 S31: 0.4435 S32: 0.0742 S33: -0.0523 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 51 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0288 34.8474 -2.8830 REMARK 3 T TENSOR REMARK 3 T11: 0.0202 T22: 0.0175 REMARK 3 T33: 0.0464 T12: 0.0097 REMARK 3 T13: 0.0156 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.2730 L22: 6.4450 REMARK 3 L33: 5.5548 L12: 1.5811 REMARK 3 L13: -1.0523 L23: -5.8874 REMARK 3 S TENSOR REMARK 3 S11: 0.0736 S12: 0.0240 S13: -0.0065 REMARK 3 S21: 0.0426 S22: -0.0413 S23: 0.0251 REMARK 3 S31: -0.0065 S32: 0.0596 S33: -0.0323 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 61 REMARK 3 ORIGIN FOR THE GROUP (A): -10.5513 41.1941 -10.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.0050 T22: 0.0352 REMARK 3 T33: 0.0353 T12: 0.0036 REMARK 3 T13: -0.0077 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 2.8407 L22: 3.7386 REMARK 3 L33: 4.2177 L12: -0.0584 REMARK 3 L13: 0.2632 L23: -2.1808 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: 0.0864 S13: 0.1732 REMARK 3 S21: -0.0301 S22: 0.0796 S23: 0.1624 REMARK 3 S31: -0.0362 S32: 0.1674 S33: -0.0987 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 62 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): -10.4729 41.4899 -18.5415 REMARK 3 T TENSOR REMARK 3 T11: 0.1581 T22: 0.1384 REMARK 3 T33: 0.1274 T12: -0.0122 REMARK 3 T13: -0.0882 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 2.0530 L22: 1.0806 REMARK 3 L33: 5.5377 L12: -1.1250 REMARK 3 L13: 2.4352 L23: -0.3095 REMARK 3 S TENSOR REMARK 3 S11: 0.1130 S12: 0.4032 S13: 0.0675 REMARK 3 S21: -0.2516 S22: -0.1214 S23: 0.0297 REMARK 3 S31: -0.0989 S32: 0.7491 S33: 0.0084 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6411 36.3578 -9.4403 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: 0.0461 REMARK 3 T33: 0.0223 T12: 0.0222 REMARK 3 T13: 0.0203 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 3.7751 L22: 2.4672 REMARK 3 L33: 9.9116 L12: 1.3268 REMARK 3 L13: -2.0684 L23: -4.0404 REMARK 3 S TENSOR REMARK 3 S11: 0.1681 S12: 0.3424 S13: 0.2355 REMARK 3 S21: -0.0388 S22: -0.0519 S23: 0.0161 REMARK 3 S31: -0.1160 S32: 0.1244 S33: -0.1163 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8985 33.0128 -13.4214 REMARK 3 T TENSOR REMARK 3 T11: 0.0507 T22: 0.1414 REMARK 3 T33: 0.0293 T12: 0.0721 REMARK 3 T13: 0.0363 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 2.1241 L22: 1.3165 REMARK 3 L33: 10.0128 L12: 0.7060 REMARK 3 L13: -1.0255 L23: -2.6552 REMARK 3 S TENSOR REMARK 3 S11: -0.0248 S12: 0.2356 S13: -0.0696 REMARK 3 S21: -0.2352 S22: -0.2436 S23: -0.1808 REMARK 3 S31: 0.3850 S32: 0.2774 S33: 0.2684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES RESIDUAL ONLY REMARK 4 REMARK 4 2WBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290038964. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16290 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1FF5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE PH 6.0 40% MPD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 22.94550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.77000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 22.94550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.77000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2103 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 16 -101.87 -124.02 REMARK 500 HIS A 88 -9.93 78.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 4 OD1 REMARK 620 2 ARG A 5 O 89.6 REMARK 620 3 ASP A 37 OD1 160.3 87.5 REMARK 620 4 ASP A 37 OD2 147.7 103.7 51.4 REMARK 620 5 ASP A 39 OD2 74.3 78.8 124.0 79.5 REMARK 620 6 ASP A 41 OD2 77.3 165.2 107.1 84.5 90.8 REMARK 620 7 ASP A 87 OD2 78.5 85.1 81.9 131.2 148.3 99.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WCP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL METHIONINE IS A CLONING ARTIFACT. PROTEIN WAS REMARK 999 CLONED WITH AN ADDITIONAL C-TERMINAL HIS-TAG WHICH IS NOT REMARK 999 SEEN IN ELECTRON DENSITY AND WAS OMITTED IN THE SEQUENCE. DBREF 2WBX A 1 1 PDB 2WBX 2WBX 1 1 DBREF 2WBX A 2 102 UNP Q99PF4 CAD23_MOUSE 24 124 SEQRES 1 A 102 MET GLN VAL ASN ARG LEU PRO PHE PHE THR ASN HIS PHE SEQRES 2 A 102 PHE ASP THR TYR LEU LEU ILE SER GLU ASP THR PRO VAL SEQRES 3 A 102 GLY SER SER VAL THR GLN LEU LEU ALA ARG ASP MET ASP SEQRES 4 A 102 ASN ASP PRO LEU VAL PHE GLY VAL SER GLY GLU GLU ALA SEQRES 5 A 102 SER ARG PHE PHE ALA VAL GLU PRO ASP THR GLY VAL VAL SEQRES 6 A 102 TRP LEU ARG GLN PRO LEU ASP ARG GLU THR LYS SER GLU SEQRES 7 A 102 PHE THR VAL GLU PHE SER VAL SER ASP HIS GLN GLY VAL SEQRES 8 A 102 ILE THR ARG LYS VAL ASN ILE GLN VAL GLY ASP HET CA A1103 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *105(H2 O) HELIX 1 1 ASN A 11 THR A 16 5 6 HELIX 2 2 GLY A 49 PHE A 55 1 7 SHEET 1 AA 2 PHE A 8 PHE A 9 0 SHEET 2 AA 2 ALA A 35 ARG A 36 -1 O ARG A 36 N PHE A 8 SHEET 1 AB 4 LEU A 18 SER A 21 0 SHEET 2 AB 4 VAL A 91 GLY A 101 1 O ASN A 97 N LEU A 18 SHEET 3 AB 4 GLU A 78 SER A 86 -1 O PHE A 79 N ILE A 98 SHEET 4 AB 4 VAL A 44 SER A 48 -1 O VAL A 44 N SER A 86 SHEET 1 AC 3 SER A 29 GLN A 32 0 SHEET 2 AC 3 VAL A 64 LEU A 67 -1 O VAL A 65 N VAL A 30 SHEET 3 AC 3 PHE A 56 VAL A 58 -1 O ALA A 57 N TRP A 66 LINK OD1 ASN A 4 CA CA A1103 1555 1555 2.33 LINK O ARG A 5 CA CA A1103 1555 1555 2.35 LINK OD1 ASP A 37 CA CA A1103 1555 1555 2.42 LINK OD2 ASP A 37 CA CA A1103 1555 1555 2.61 LINK OD2 ASP A 39 CA CA A1103 1555 1555 2.38 LINK OD2 ASP A 41 CA CA A1103 1555 1555 2.33 LINK OD2 ASP A 87 CA CA A1103 1555 1555 2.39 SITE 1 AC1 6 ASN A 4 ARG A 5 ASP A 37 ASP A 39 SITE 2 AC1 6 ASP A 41 ASP A 87 CRYST1 45.891 49.540 45.883 90.00 98.97 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021791 0.000000 0.003440 0.00000 SCALE2 0.000000 0.020186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022064 0.00000