HEADER HYDROLASE 17-MAR-09 2WCW TITLE 1.6A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A HOLLIDAY TITLE 2 JUNCTION RESOLVASE FROM AN ARCHAEAL HYPERTHERMOPHILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HJC; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 2-136; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: 4304; SOURCE 5 ATCC: 49558; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PETM12; SOURCE 10 OTHER_DETAILS: GERMAN COLLECTION OF MICROORGANISMS (DSM) KEYWDS TYPE II RESTRICTION ENDONUCLEASE, HYDROLASE, DNA BINDING PROTEIN, KEYWDS 2 HOLLIDAY JUNCTION RESOLVASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CAROLIS,C.KOEHLER,C.SAUTER,J.BASQUIN,D.SUCK,I.TOEROE REVDAT 2 01-MAY-24 2WCW 1 REMARK REVDAT 1 24-MAR-09 2WCW 0 JRNL AUTH C.CAROLIS,C.KOEHLER,C.SAUTER,J.BASQUIN,D.SUCK,I.TOEROE JRNL TITL 1.6 A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A JRNL TITL 2 HOLLIDAY JUNCTION RESOLVASE FROM AN ARCHAEAL JRNL TITL 3 HYPERTHERMOPHILE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 60364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1814 - 4.4225 0.99 2829 143 0.1594 0.2152 REMARK 3 2 4.4225 - 3.5122 1.00 2799 155 0.1281 0.1520 REMARK 3 3 3.5122 - 3.0688 1.00 2782 157 0.1427 0.1760 REMARK 3 4 3.0688 - 2.7884 1.00 2782 145 0.1475 0.1874 REMARK 3 5 2.7884 - 2.5887 0.99 2780 152 0.1443 0.1721 REMARK 3 6 2.5887 - 2.4361 0.98 2727 124 0.1383 0.1867 REMARK 3 7 2.4361 - 2.3142 0.99 2761 145 0.1393 0.1704 REMARK 3 8 2.3142 - 2.2135 0.98 2745 143 0.1312 0.1604 REMARK 3 9 2.2135 - 2.1283 0.98 2717 155 0.1340 0.1457 REMARK 3 10 2.1283 - 2.0549 0.98 2663 159 0.1341 0.1908 REMARK 3 11 2.0549 - 1.9906 0.97 2712 141 0.1423 0.1853 REMARK 3 12 1.9906 - 1.9338 0.96 2652 145 0.1516 0.1818 REMARK 3 13 1.9338 - 1.8829 0.95 2675 124 0.1551 0.2075 REMARK 3 14 1.8829 - 1.8369 0.95 2580 161 0.1608 0.1976 REMARK 3 15 1.8369 - 1.7952 0.91 2467 165 0.1763 0.2204 REMARK 3 16 1.7952 - 1.7570 0.91 2539 122 0.1882 0.2312 REMARK 3 17 1.7570 - 1.7218 0.89 2504 126 0.1946 0.2387 REMARK 3 18 1.7218 - 1.6893 0.87 2414 113 0.2048 0.2110 REMARK 3 19 1.6893 - 1.6592 0.86 2412 134 0.2155 0.2505 REMARK 3 20 1.6592 - 1.6311 0.84 2291 125 0.2343 0.2686 REMARK 3 21 1.6311 - 1.6047 0.82 2271 119 0.2492 0.2662 REMARK 3 22 1.6047 - 1.5801 0.79 2201 108 0.2721 0.2765 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 60.18 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.60680 REMARK 3 B22 (A**2) : 1.55310 REMARK 3 B33 (A**2) : 1.05370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.30120 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4102 REMARK 3 ANGLE : 1.128 5551 REMARK 3 CHIRALITY : 0.068 599 REMARK 3 PLANARITY : 0.005 721 REMARK 3 DIHEDRAL : 15.704 1521 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:11) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1117 -3.9334 13.0180 REMARK 3 T TENSOR REMARK 3 T11: 0.4146 T22: 0.1592 REMARK 3 T33: 0.5455 T12: -0.0039 REMARK 3 T13: 0.2005 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 4.5438 L22: 0.7696 REMARK 3 L33: 6.3335 L12: -0.0506 REMARK 3 L13: -1.8977 L23: 2.0362 REMARK 3 S TENSOR REMARK 3 S11: 0.5274 S12: 0.0249 S13: 1.7345 REMARK 3 S21: -0.1923 S22: 0.3135 S23: 0.2298 REMARK 3 S31: -1.5720 S32: -0.1294 S33: -0.7786 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 12:129) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3353 -16.8859 12.2795 REMARK 3 T TENSOR REMARK 3 T11: 0.1294 T22: 0.1066 REMARK 3 T33: 0.1019 T12: 0.0064 REMARK 3 T13: -0.0191 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.5561 L22: 1.2402 REMARK 3 L33: 1.6333 L12: -0.7358 REMARK 3 L13: -1.0274 L23: 0.5064 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: -0.0756 S13: -0.0676 REMARK 3 S21: -0.0066 S22: -0.0163 S23: 0.0747 REMARK 3 S31: 0.0605 S32: 0.0445 S33: 0.0050 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 3:10) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7566 -6.3065 -12.9767 REMARK 3 T TENSOR REMARK 3 T11: 0.3769 T22: 0.1556 REMARK 3 T33: 0.3275 T12: 0.0480 REMARK 3 T13: 0.0466 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 4.9030 L22: 0.2813 REMARK 3 L33: 5.0336 L12: -0.9619 REMARK 3 L13: -1.9089 L23: -0.2263 REMARK 3 S TENSOR REMARK 3 S11: 0.2776 S12: -0.0460 S13: 1.1616 REMARK 3 S21: 0.1363 S22: 0.0423 S23: -0.2820 REMARK 3 S31: -1.2019 S32: -0.0473 S33: -0.3580 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 11:129) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3333 -18.5785 -10.9176 REMARK 3 T TENSOR REMARK 3 T11: 0.1319 T22: 0.0893 REMARK 3 T33: 0.0900 T12: 0.0082 REMARK 3 T13: -0.0040 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.4565 L22: 0.9187 REMARK 3 L33: 1.3812 L12: 0.1463 REMARK 3 L13: -0.6560 L23: -0.3245 REMARK 3 S TENSOR REMARK 3 S11: -0.0418 S12: -0.0188 S13: -0.0434 REMARK 3 S21: -0.0157 S22: 0.0211 S23: -0.0584 REMARK 3 S31: -0.0714 S32: 0.0680 S33: 0.0169 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN C AND RESID 5:10) REMARK 3 ORIGIN FOR THE GROUP (A): -45.5995 12.7536 36.7725 REMARK 3 T TENSOR REMARK 3 T11: 0.4894 T22: 0.2562 REMARK 3 T33: 0.6888 T12: -0.0767 REMARK 3 T13: 0.2669 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 2.3347 L22: 3.3392 REMARK 3 L33: 6.7286 L12: -0.8905 REMARK 3 L13: 0.7836 L23: -4.6965 REMARK 3 S TENSOR REMARK 3 S11: 0.3339 S12: 0.0363 S13: 1.0382 REMARK 3 S21: 0.5536 S22: -0.0557 S23: -0.3950 REMARK 3 S31: -1.0030 S32: 0.2303 S33: -0.3014 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN C AND RESID 11:125) REMARK 3 ORIGIN FOR THE GROUP (A): -52.2489 0.6229 34.7862 REMARK 3 T TENSOR REMARK 3 T11: 0.1124 T22: 0.1151 REMARK 3 T33: 0.1490 T12: -0.0248 REMARK 3 T13: 0.0048 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 3.1972 L22: 0.9668 REMARK 3 L33: 1.3163 L12: 0.0786 REMARK 3 L13: -0.1737 L23: 0.4772 REMARK 3 S TENSOR REMARK 3 S11: 0.0298 S12: -0.2238 S13: 0.1648 REMARK 3 S21: 0.1231 S22: -0.1540 S23: 0.1498 REMARK 3 S31: 0.0453 S32: -0.1181 S33: 0.1139 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN D AND RESID 3:10) REMARK 3 ORIGIN FOR THE GROUP (A): -37.6155 11.6254 12.8223 REMARK 3 T TENSOR REMARK 3 T11: 0.2839 T22: 0.1525 REMARK 3 T33: 0.6127 T12: 0.0586 REMARK 3 T13: -0.0000 T23: 0.0504 REMARK 3 L TENSOR REMARK 3 L11: 4.1596 L22: 1.4117 REMARK 3 L33: 5.3655 L12: 2.1470 REMARK 3 L13: -2.9633 L23: -2.5062 REMARK 3 S TENSOR REMARK 3 S11: 0.2604 S12: 0.1645 S13: 1.8895 REMARK 3 S21: 0.4490 S22: 0.1547 S23: 0.0211 REMARK 3 S31: -0.8044 S32: -0.0765 S33: -0.3335 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN D AND RESID 11:127) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0317 0.3822 17.3455 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.1104 REMARK 3 T33: 0.1190 T12: 0.0062 REMARK 3 T13: -0.0350 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.8777 L22: 0.9039 REMARK 3 L33: 0.5008 L12: 0.0939 REMARK 3 L13: -0.7707 L23: -0.0281 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: 0.0587 S13: -0.0511 REMARK 3 S21: -0.0729 S22: -0.0551 S23: 0.0336 REMARK 3 S31: -0.0255 S32: -0.0065 S33: 0.0329 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE ADDED IN THE RIDING REMARK 3 POSITIONS, BUT REMOVED PRIOR TO DEPOSITION. IN CHAIN B RESIDUES REMARK 3 29-33 ARE DISORDERED. REMARK 4 REMARK 4 2WCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290038980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.930 REMARK 200 MONOCHROMATOR : SINGLE SILICON (111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : SINGLE SILICON (111) REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60375 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: WILD-TYPE CRYSTAL FORM REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.5 M AMMONIUM ACETATE 0.1 M TRIS-HCL REMARK 280 PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.74000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, SER 29 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 90 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 91 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, SER 29 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 90 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 91 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, SER 29 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, LYS 90 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, LYS 91 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, SER 29 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, LYS 90 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, LYS 91 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 THR A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 GLU A 130 REMARK 465 ARG A 131 REMARK 465 PHE A 132 REMARK 465 GLY A 133 REMARK 465 GLU A 134 REMARK 465 LYS A 135 REMARK 465 VAL A 136 REMARK 465 GLY B -2 REMARK 465 THR B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 LYS B 2 REMARK 465 ALA B 29 REMARK 465 GLY B 30 REMARK 465 VAL B 31 REMARK 465 SER B 32 REMARK 465 PRO B 33 REMARK 465 GLU B 130 REMARK 465 ARG B 131 REMARK 465 PHE B 132 REMARK 465 GLY B 133 REMARK 465 GLU B 134 REMARK 465 LYS B 135 REMARK 465 VAL B 136 REMARK 465 GLY C -2 REMARK 465 THR C -1 REMARK 465 MET C 0 REMARK 465 GLY C 1 REMARK 465 LYS C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 LYS C 126 REMARK 465 PHE C 127 REMARK 465 PHE C 128 REMARK 465 GLN C 129 REMARK 465 GLU C 130 REMARK 465 ARG C 131 REMARK 465 PHE C 132 REMARK 465 GLY C 133 REMARK 465 GLU C 134 REMARK 465 LYS C 135 REMARK 465 VAL C 136 REMARK 465 GLY D -2 REMARK 465 THR D -1 REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 LYS D 2 REMARK 465 PHE D 128 REMARK 465 GLN D 129 REMARK 465 GLU D 130 REMARK 465 ARG D 131 REMARK 465 PHE D 132 REMARK 465 GLY D 133 REMARK 465 GLU D 134 REMARK 465 LYS D 135 REMARK 465 VAL D 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 66 N NH4 B 1130 1.97 REMARK 500 O HOH B 2062 O HOH B 2063 2.09 REMARK 500 O HOH A 2069 O HOH D 2121 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 31 30.18 -89.88 REMARK 500 ASP A 110 -168.18 -111.62 REMARK 500 ARG B 45 -34.28 -139.41 REMARK 500 THR B 103 -164.77 -112.11 REMARK 500 GLU B 104 -80.20 -33.78 REMARK 500 ASN C 106 -169.08 -167.34 REMARK 500 ASP C 110 -168.01 -111.34 REMARK 500 ASP D 110 -167.81 -109.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 B 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 C 1126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 D 1128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 A 1132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 C 1127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1128 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL GT AND G4 FOLLOWING THE FIRST METHIONINE ARE REMARK 999 CLONING ARTIFACTS DBREF 2WCW A -2 1 PDB 2WCW 2WCW -2 1 DBREF 2WCW A 2 136 UNP O28314 O28314_ARCFU 2 136 DBREF 2WCW B -2 1 PDB 2WCW 2WCW -2 1 DBREF 2WCW B 2 136 UNP O28314 O28314_ARCFU 2 136 DBREF 2WCW C -2 1 PDB 2WCW 2WCW -2 1 DBREF 2WCW C 2 136 UNP O28314 O28314_ARCFU 2 136 DBREF 2WCW D -2 1 PDB 2WCW 2WCW -2 1 DBREF 2WCW D 2 136 UNP O28314 O28314_ARCFU 2 136 SEQADV 2WCW ALA A 29 UNP O28314 SER 29 ENGINEERED MUTATION SEQADV 2WCW ALA A 90 UNP O28314 LYS 90 ENGINEERED MUTATION SEQADV 2WCW ALA A 91 UNP O28314 LYS 91 ENGINEERED MUTATION SEQADV 2WCW ALA B 29 UNP O28314 SER 29 ENGINEERED MUTATION SEQADV 2WCW ALA B 90 UNP O28314 LYS 90 ENGINEERED MUTATION SEQADV 2WCW ALA B 91 UNP O28314 LYS 91 ENGINEERED MUTATION SEQADV 2WCW ALA C 29 UNP O28314 SER 29 ENGINEERED MUTATION SEQADV 2WCW ALA C 90 UNP O28314 LYS 90 ENGINEERED MUTATION SEQADV 2WCW ALA C 91 UNP O28314 LYS 91 ENGINEERED MUTATION SEQADV 2WCW ALA D 29 UNP O28314 SER 29 ENGINEERED MUTATION SEQADV 2WCW ALA D 90 UNP O28314 LYS 90 ENGINEERED MUTATION SEQADV 2WCW ALA D 91 UNP O28314 LYS 91 ENGINEERED MUTATION SEQRES 1 A 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 A 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 A 139 ILE ARG VAL ALA GLY ALA GLY VAL SER PRO PHE PRO CYS SEQRES 4 A 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 A 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 A 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 A 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 A 139 ARG ALA ALA TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 A 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 A 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 A 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL SEQRES 1 B 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 B 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 B 139 ILE ARG VAL ALA GLY ALA GLY VAL SER PRO PHE PRO CYS SEQRES 4 B 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 B 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 B 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 B 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 B 139 ARG ALA ALA TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 B 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 B 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 B 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL SEQRES 1 C 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 C 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 C 139 ILE ARG VAL ALA GLY ALA GLY VAL SER PRO PHE PRO CYS SEQRES 4 C 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 C 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 C 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 C 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 C 139 ARG ALA ALA TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 C 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 C 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 C 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL SEQRES 1 D 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 D 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 D 139 ILE ARG VAL ALA GLY ALA GLY VAL SER PRO PHE PRO CYS SEQRES 4 D 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 D 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 D 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 D 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 D 139 ARG ALA ALA TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 D 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 D 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 D 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL HET ACT A1130 4 HET ACT A1131 4 HET NH4 A1132 1 HET NH4 B1130 1 HET ACT B1131 4 HET NH4 C1126 1 HET NH4 C1127 1 HET ACT C1128 4 HET NH4 D1128 1 HET ACT D1129 4 HET ACT D1130 4 HETNAM ACT ACETATE ION HETNAM NH4 AMMONIUM ION FORMUL 5 ACT 6(C2 H3 O2 1-) FORMUL 7 NH4 5(H4 N 1+) FORMUL 16 HOH *526(H2 O) HELIX 1 1 LYS A 4 ALA A 19 1 16 HELIX 2 2 ALA A 64 GLY A 78 1 15 HELIX 3 3 GLN A 98 LEU A 100 5 3 HELIX 4 4 VAL A 113 GLY A 117 5 5 HELIX 5 5 GLU A 119 LYS A 126 1 8 HELIX 6 6 PHE A 127 GLN A 129 5 3 HELIX 7 7 SER B 3 ALA B 19 1 17 HELIX 8 8 ALA B 64 GLY B 78 1 15 HELIX 9 9 GLN B 98 LEU B 100 5 3 HELIX 10 10 VAL B 113 GLY B 117 5 5 HELIX 11 11 GLU B 119 GLY B 125 1 7 HELIX 12 12 GLY C 5 ALA C 19 1 15 HELIX 13 13 SER C 63 GLY C 78 1 16 HELIX 14 14 GLN C 98 LEU C 100 5 3 HELIX 15 15 VAL C 113 GLY C 117 5 5 HELIX 16 16 GLU C 119 GLY C 125 1 7 HELIX 17 17 SER D 3 ALA D 19 1 17 HELIX 18 18 SER D 63 GLY D 78 1 16 HELIX 19 19 GLN D 98 LEU D 100 5 3 HELIX 20 20 VAL D 113 GLY D 117 5 5 HELIX 21 21 GLU D 119 GLY D 125 1 7 SHEET 1 AA 5 ALA A 22 ARG A 25 0 SHEET 2 AA 5 ILE A 39 GLY A 42 -1 O VAL A 40 N ILE A 24 SHEET 3 AA 5 TYR A 47 MET A 54 -1 O LEU A 48 N ALA A 41 SHEET 4 AA 5 GLU A 80 LYS A 86 1 O GLU A 80 N ALA A 49 SHEET 5 AA 5 ARG A 93 PRO A 96 -1 O ARG A 93 N LEU A 85 SHEET 1 AB 3 LEU A 60 SER A 63 0 SHEET 2 AB 3 ASN A 106 ILE A 109 -1 O PHE A 107 N LEU A 62 SHEET 3 AB 3 GLU A 101 ARG A 102 -1 O GLU A 101 N LYS A 108 SHEET 1 BA 5 ALA B 22 ARG B 25 0 SHEET 2 BA 5 ILE B 39 GLY B 42 -1 O VAL B 40 N ILE B 24 SHEET 3 BA 5 TYR B 47 MET B 54 -1 O LEU B 48 N ALA B 41 SHEET 4 BA 5 GLU B 80 LYS B 86 1 O GLU B 80 N ALA B 49 SHEET 5 BA 5 ARG B 93 PRO B 96 -1 O ARG B 93 N LEU B 85 SHEET 1 BB 3 LEU B 60 SER B 63 0 SHEET 2 BB 3 ASN B 106 ILE B 109 -1 O PHE B 107 N LEU B 62 SHEET 3 BB 3 GLU B 101 ARG B 102 -1 O GLU B 101 N LYS B 108 SHEET 1 CA 5 ALA C 22 ARG C 25 0 SHEET 2 CA 5 ILE C 39 GLY C 42 -1 O VAL C 40 N ILE C 24 SHEET 3 CA 5 TYR C 47 MET C 54 -1 O LEU C 48 N ALA C 41 SHEET 4 CA 5 GLU C 80 LYS C 86 1 O GLU C 80 N ALA C 49 SHEET 5 CA 5 ARG C 93 PRO C 96 -1 O ARG C 93 N LEU C 85 SHEET 1 CB 3 LEU C 60 LEU C 62 0 SHEET 2 CB 3 PHE C 107 ILE C 109 -1 O PHE C 107 N LEU C 62 SHEET 3 CB 3 GLU C 101 ARG C 102 -1 O GLU C 101 N LYS C 108 SHEET 1 DA 5 ALA D 22 ARG D 25 0 SHEET 2 DA 5 ILE D 39 GLY D 42 -1 O VAL D 40 N ILE D 24 SHEET 3 DA 5 TYR D 47 MET D 54 -1 O LEU D 48 N ALA D 41 SHEET 4 DA 5 GLU D 80 LYS D 86 1 O GLU D 80 N ALA D 49 SHEET 5 DA 5 ARG D 93 PRO D 96 -1 O ARG D 93 N LEU D 85 SHEET 1 DB 3 LEU D 60 LEU D 62 0 SHEET 2 DB 3 PHE D 107 ILE D 109 -1 O PHE D 107 N LEU D 62 SHEET 3 DB 3 GLU D 101 ARG D 102 -1 O GLU D 101 N LYS D 108 CISPEP 1 LEU A 58 PRO A 59 0 0.20 CISPEP 2 LEU B 58 PRO B 59 0 1.40 CISPEP 3 LEU C 58 PRO C 59 0 3.71 CISPEP 4 LEU D 58 PRO D 59 0 -0.85 SITE 1 AC1 4 LEU B 62 SER B 63 GLU B 66 HOH B2071 SITE 1 AC2 2 ASP C 110 GLU C 111 SITE 1 AC3 4 LYS D 53 MET D 54 ARG D 55 ACT D1130 SITE 1 AC4 4 ACT A1130 HOH A2026 HOH A2151 HOH A2153 SITE 1 AC5 3 LYS C 56 GLU C 57 ACT C1128 SITE 1 AC6 4 ARG A 45 PHE A 128 NH4 A1132 HOH A2149 SITE 1 AC7 7 LYS C 105 ALA D 64 ARG D 102 GLU D 104 SITE 2 AC7 7 LYS D 105 HOH D2127 HOH D2150 SITE 1 AC8 8 GLU A 111 TYR A 114 PRO A 115 GLU B 57 SITE 2 AC8 8 LEU B 58 LEU B 87 HOH B2134 HOH B2135 SITE 1 AC9 4 LYS D 53 ARG D 55 NH4 D1128 HOH D2051 SITE 1 BC1 6 ALA A 91 TRP A 92 ARG A 93 GLU A 119 SITE 2 BC1 6 HOH A2112 GLU B 111 SITE 1 BC2 4 ARG C 55 LYS C 56 NH4 C1127 HOH C2088 CRYST1 57.510 75.480 60.920 90.00 115.34 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017388 0.000000 0.008234 0.00000 SCALE2 0.000000 0.013249 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018162 0.00000 MTRIX1 1 -0.996100 -0.087930 -0.003701 2.48900 1 MTRIX2 1 -0.085640 0.978200 -0.189300 0.10060 1 MTRIX3 1 0.020270 -0.188300 -0.981900 -1.51000 1 MTRIX1 2 0.964500 0.075200 0.253200 34.92000 1 MTRIX2 2 -0.084260 0.996100 0.025140 -22.09000 1 MTRIX3 2 -0.250300 -0.045590 0.967100 -34.55000 1 MTRIX1 3 -0.952000 -0.189700 -0.240200 -30.64000 1 MTRIX2 3 -0.115000 0.949000 -0.293400 -14.94000 1 MTRIX3 3 0.283600 -0.251700 -0.925300 37.03000 1