HEADER TRANSFERASE 31-MAR-09 2WEI TITLE CRYSTAL STRUCTURE OF THE KINASE DOMAIN OF CRYPTOSPORIDIUM PARVUM TITLE 2 CALCIUM DEPENDENT PROTEIN KINASE IN COMPLEX WITH 3-MB-PP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-DOMAIN PROTEIN KINASE 1, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 70-338; COMPND 5 SYNONYM: KINASE DOMAIN OF CALCIUM DEPENDENT PROTEIN KINASE 4; COMPND 6 EC: 2.7.1.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM IOWA II; SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 GENE: CGD3_920; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3PACYC-LIC LAMP-PHOSPHATASE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: P15-MHL KEYWDS NUCLEOTIDE-BINDING, SERINE/THREONINE-PROTEIN KINASE, KINASE, KEYWDS 2 TRANSFERASE, ATP-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.K.ROOS,O.KING,A.CHAIKUAD,C.ZHANG,K.M.SHOKAT,A.K.WERNIMONT,J.D.ARTZ, AUTHOR 2 L.LIN,F.I.MACKENZIE,P.J.FINERTY,M.VEDADI,M.SCHAPIRA,M.INDARTE, AUTHOR 3 I.KOZIERADZKI,A.C.W.PIKE,O.FEDOROV,D.DOYLE,J.MUNIZ,C.H.ARROWSMITH, AUTHOR 4 J.WEIGELT,A.EDWARDS,C.BOUNTRA,F.VON DELFT,T.HEIGHTMAN,R.HUI REVDAT 6 13-DEC-23 2WEI 1 REMARK REVDAT 5 24-JAN-18 2WEI 1 AUTHOR JRNL REVDAT 4 05-DEC-12 2WEI 1 KEYWDS AUTHOR JRNL DBREF REVDAT 4 2 1 SEQADV REVDAT 3 12-OCT-11 2WEI 1 JRNL REMARK REVDAT 2 13-JUL-11 2WEI 1 VERSN REVDAT 1 28-APR-09 2WEI 0 JRNL AUTH J.D.ARTZ,A.K.WERNIMONT,A.ALLALI-HASSANI,Y.ZHAO,M.AMANI, JRNL AUTH 2 Y.H.LIN,G.SENISTERRA,G.A.WASNEY,O.FEDOROV,O.KING,A.K.ROOS, JRNL AUTH 3 V.V.LUNIN,W.QIU,P.J.FINERTY,A.HUTCHINSON,I.CHAU,F.VON DELFT, JRNL AUTH 4 F.I.MACKENZIE,J.LEW,I.KOZIERADZKI,M.VEDADI,M.SCHAPIRA, JRNL AUTH 5 C.ZHANG,K.M.SHOKAT,T.HEIGHTMAN,R.HUI JRNL TITL THE CRYPTOSPORIDIUM PARVUM KINOME. JRNL REF BMC GENOMICS V. 12 478 2011 JRNL REFN ESSN 1471-2164 JRNL PMID 21962082 JRNL DOI 10.1186/1471-2164-12-478 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0089 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 36676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1837 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2629 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.3660 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.4100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2246 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 22.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.197 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2335 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1627 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3146 ; 1.410 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3951 ; 1.624 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 5.608 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;34.293 ;23.611 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 437 ;12.972 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.688 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 342 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2537 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 484 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1380 ; 1.948 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 563 ; 0.606 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2236 ; 3.082 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 955 ; 4.818 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 910 ; 7.025 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -8 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2217 -20.1247 -21.7875 REMARK 3 T TENSOR REMARK 3 T11: 0.2602 T22: 0.1944 REMARK 3 T33: 0.1336 T12: 0.0133 REMARK 3 T13: 0.0030 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 4.4555 L22: 0.5126 REMARK 3 L33: 2.0284 L12: 1.0877 REMARK 3 L13: -1.1564 L23: -0.9051 REMARK 3 S TENSOR REMARK 3 S11: -0.1022 S12: 0.4347 S13: 0.0476 REMARK 3 S21: 0.0272 S22: 0.0904 S23: -0.0429 REMARK 3 S31: -0.2348 S32: -0.0611 S33: 0.0118 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1037 -28.4014 -11.1294 REMARK 3 T TENSOR REMARK 3 T11: 0.0772 T22: 0.0701 REMARK 3 T33: 0.0525 T12: 0.0172 REMARK 3 T13: -0.0008 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.5661 L22: 1.1618 REMARK 3 L33: 2.2956 L12: -0.1016 REMARK 3 L13: -0.5419 L23: -0.0725 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: 0.1600 S13: -0.1807 REMARK 3 S21: -0.0866 S22: -0.0608 S23: -0.1379 REMARK 3 S31: 0.0009 S32: -0.0112 S33: 0.0912 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 159 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 7.3141 -13.8543 0.5576 REMARK 3 T TENSOR REMARK 3 T11: 0.1449 T22: 0.1422 REMARK 3 T33: 0.1444 T12: 0.0543 REMARK 3 T13: -0.0662 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 5.9102 L22: 4.5841 REMARK 3 L33: 10.8226 L12: -0.9736 REMARK 3 L13: -6.2549 L23: 0.5587 REMARK 3 S TENSOR REMARK 3 S11: 0.1215 S12: 0.2881 S13: 0.0744 REMARK 3 S21: -0.3719 S22: -0.0438 S23: 0.2700 REMARK 3 S31: -0.2985 S32: -0.2197 S33: -0.0777 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 170 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): 14.8253 -26.8312 -1.2306 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.0702 REMARK 3 T33: 0.0395 T12: 0.0092 REMARK 3 T13: -0.0119 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 2.8174 L22: 2.2796 REMARK 3 L33: 2.5654 L12: -0.5452 REMARK 3 L13: -0.9728 L23: -0.3413 REMARK 3 S TENSOR REMARK 3 S11: 0.0426 S12: 0.1956 S13: -0.0360 REMARK 3 S21: -0.1532 S22: -0.0890 S23: 0.0616 REMARK 3 S31: -0.0571 S32: -0.1552 S33: 0.0464 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 337 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7722 -22.8908 13.2247 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: 0.0420 REMARK 3 T33: 0.0031 T12: 0.0152 REMARK 3 T13: 0.0019 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.8270 L22: 3.0346 REMARK 3 L33: 1.8687 L12: -0.1310 REMARK 3 L13: -0.1099 L23: 0.1526 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: -0.0694 S13: 0.0283 REMARK 3 S21: 0.0590 S22: -0.0062 S23: 0.0870 REMARK 3 S31: -0.0579 S32: -0.0848 S33: 0.0192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES RESIDUAL ONLY REMARK 4 REMARK 4 2WEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290039280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99989 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38607 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 32.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3DFA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1M BIS-TRIS PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.23000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.45000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.84500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.45000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.61500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.84500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.61500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.23000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 GLU A 339 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 84 CE NZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLN A 100 CG CD OE1 NE2 REMARK 470 THR A 230 OG1 CG2 REMARK 470 LYS A 231 CD CE NZ REMARK 470 LYS A 277 CE NZ REMARK 470 LYS A 334 CE NZ REMARK 470 GLU A 338 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 242 CG1 - CB - CG2 ANGL. DEV. = -14.9 DEGREES REMARK 500 ARG A 285 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 87 -23.56 80.86 REMARK 500 LYS A 168 -52.94 76.03 REMARK 500 ARG A 197 -30.55 79.99 REMARK 500 ASP A 234 74.55 -151.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VGG A 600 DBREF 2WEI A 70 338 UNP A3FQ16 A3FQ16_CRYPV 70 338 SEQADV 2WEI MET A -16 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -15 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -14 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -13 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -12 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -11 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI HIS A -10 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI SER A -9 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI SER A -8 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI GLY A -7 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI ARG A -6 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI GLU A -5 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI ASN A -4 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI LEU A -3 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI TYR A -2 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI PHE A -1 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI GLN A 0 UNP A3FQ16 EXPRESSION TAG SEQADV 2WEI GLU A 339 UNP A3FQ16 EXPRESSION TAG SEQRES 1 A 287 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 287 LEU TYR PHE GLN GLY THR PHE ALA GLU ARG TYR ASN ILE SEQRES 3 A 287 VAL CYS MET LEU GLY LYS GLY SER PHE GLY GLU VAL LEU SEQRES 4 A 287 LYS CYS LYS ASP ARG ILE THR GLN GLN GLU TYR ALA VAL SEQRES 5 A 287 LYS VAL ILE ASN LYS ALA SER ALA LYS ASN LYS ASP THR SEQRES 6 A 287 SER THR ILE LEU ARG GLU VAL GLU LEU LEU LYS LYS LEU SEQRES 7 A 287 ASP HIS PRO ASN ILE MET LYS LEU PHE GLU ILE LEU GLU SEQRES 8 A 287 ASP SER SER SER PHE TYR ILE VAL GLY GLU LEU TYR THR SEQRES 9 A 287 GLY GLY GLU LEU PHE ASP GLU ILE ILE LYS ARG LYS ARG SEQRES 10 A 287 PHE SER GLU HIS ASP ALA ALA ARG ILE ILE LYS GLN VAL SEQRES 11 A 287 PHE SER GLY ILE THR TYR MET HIS LYS HIS ASN ILE VAL SEQRES 12 A 287 HIS ARG ASP LEU LYS PRO GLU ASN ILE LEU LEU GLU SER SEQRES 13 A 287 LYS GLU LYS ASP CYS ASP ILE LYS ILE ILE ASP PHE GLY SEQRES 14 A 287 LEU SER THR CYS PHE GLN GLN ASN THR LYS MET LYS ASP SEQRES 15 A 287 ARG ILE GLY THR ALA TYR TYR ILE ALA PRO GLU VAL LEU SEQRES 16 A 287 ARG GLY THR TYR ASP GLU LYS CYS ASP VAL TRP SER ALA SEQRES 17 A 287 GLY VAL ILE LEU TYR ILE LEU LEU SER GLY THR PRO PRO SEQRES 18 A 287 PHE TYR GLY LYS ASN GLU TYR ASP ILE LEU LYS ARG VAL SEQRES 19 A 287 GLU THR GLY LYS TYR ALA PHE ASP LEU PRO GLN TRP ARG SEQRES 20 A 287 THR ILE SER ASP ASP ALA LYS ASP LEU ILE ARG LYS MET SEQRES 21 A 287 LEU THR PHE HIS PRO SER LEU ARG ILE THR ALA THR GLN SEQRES 22 A 287 CYS LEU GLU HIS PRO TRP ILE GLN LYS TYR SER SER GLU SEQRES 23 A 287 GLU HET VGG A 600 22 HETNAM VGG 1-TERT-BUTYL-3-(3-METHYLBENZYL)-1H-PYRAZOLO[3,4- HETNAM 2 VGG D]PYRIMIDIN-4-AMINE FORMUL 2 VGG C17 H21 N5 FORMUL 3 HOH *199(H2 O) HELIX 1 1 GLY A -7 GLN A 0 1 8 HELIX 2 2 GLN A 0 ARG A 75 1 7 HELIX 3 3 ASP A 116 LYS A 129 1 14 HELIX 4 4 GLU A 159 LYS A 168 1 10 HELIX 5 5 SER A 171 HIS A 192 1 22 HELIX 6 6 LYS A 200 GLU A 202 5 3 HELIX 7 7 GLY A 221 CYS A 225 5 5 HELIX 8 8 ASP A 234 TYR A 240 1 7 HELIX 9 9 ALA A 243 ARG A 248 1 6 HELIX 10 10 GLU A 253 GLY A 270 1 18 HELIX 11 11 ASN A 278 GLY A 289 1 12 HELIX 12 12 LEU A 295 ARG A 299 5 5 HELIX 13 13 SER A 302 LEU A 313 1 12 HELIX 14 14 HIS A 316 ARG A 320 5 5 HELIX 15 15 THR A 322 HIS A 329 1 8 HELIX 16 16 HIS A 329 SER A 336 1 8 SHEET 1 AA 5 TYR A 76 GLY A 85 0 SHEET 2 AA 5 GLY A 88 ASP A 95 -1 O GLY A 88 N GLY A 85 SHEET 3 AA 5 GLU A 101 ASN A 108 -1 O TYR A 102 N CYS A 93 SHEET 4 AA 5 SER A 147 GLY A 152 -1 O PHE A 148 N ILE A 107 SHEET 5 AA 5 LEU A 138 GLU A 143 -1 N PHE A 139 O VAL A 151 SHEET 1 AB 2 ILE A 204 LEU A 206 0 SHEET 2 AB 2 ILE A 215 ILE A 217 -1 O LYS A 216 N LEU A 205 SITE 1 AC1 11 LEU A 82 ALA A 103 LYS A 105 MET A 136 SITE 2 AC1 11 ILE A 150 GLU A 153 TYR A 155 LEU A 205 SITE 3 AC1 11 ILE A 218 HOH A2029 HOH A2199 CRYST1 68.900 68.900 130.460 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014514 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014514 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007665 0.00000