HEADER CHAPERONE 01-APR-09 2WER TITLE YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH RADICICOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT MOLECULAR CHAPERONE HSP82; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-220; COMPND 5 SYNONYM: HEAT SHOCK PROTEIN HSP90 HEAT-INDUCIBLE ISOFORM, HSP90,82 COMPND 6 KDA HEAT SHOCK PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPASE, CHAPERONE, ATP-BINDING, PHOSPHOPROTEIN, STRESS RESPONSE, KEYWDS 2 NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ROE,C.PRODROMOU,L.H.PEARL REVDAT 4 01-MAY-24 2WER 1 REMARK REVDAT 3 02-NOV-11 2WER 1 JRNL REVDAT 2 13-JUL-11 2WER 1 VERSN REVDAT 1 14-APR-09 2WER 0 JRNL AUTH C.PRODROMOU,J.M.NUTTALL,S.H.MILLSON,S.M.ROE,T.S.SIM,D.TAN, JRNL AUTH 2 P.WORKMAN,L.H.PEARL,P.W.PIPER JRNL TITL STRUCTURAL BASIS OF THE RADICICOL RESISTANCE DISPLAYED BY A JRNL TITL 2 FUNGAL HSP90. JRNL REF ACS CHEM.BIOL. V. 4 289 2009 JRNL REFN ISSN 1554-8929 JRNL PMID 19236053 JRNL DOI 10.1021/CB9000316 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 110.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 76533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4046 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5549 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3358 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 284 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 25.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.96000 REMARK 3 B22 (A**2) : -1.04000 REMARK 3 B33 (A**2) : 2.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.730 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3632 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4916 ; 1.928 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 450 ; 7.295 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;36.415 ;25.062 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 656 ;15.471 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.556 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 574 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2700 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2236 ; 1.086 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3620 ; 1.818 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1396 ; 2.855 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1290 ; 4.504 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9668 57.1991 0.9556 REMARK 3 T TENSOR REMARK 3 T11: -0.0332 T22: -0.0249 REMARK 3 T33: 0.0299 T12: -0.0121 REMARK 3 T13: 0.0058 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.0808 L22: 1.1136 REMARK 3 L33: 0.1978 L12: 0.6130 REMARK 3 L13: 0.0779 L23: -0.0561 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0465 S13: -0.3697 REMARK 3 S21: 0.0119 S22: -0.0236 S23: -0.1980 REMARK 3 S31: -0.1061 S32: -0.0469 S33: 0.0219 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 214 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1523 42.9913 -28.5111 REMARK 3 T TENSOR REMARK 3 T11: -0.0300 T22: -0.0268 REMARK 3 T33: 0.0288 T12: -0.0128 REMARK 3 T13: -0.0033 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.0927 L22: 1.0935 REMARK 3 L33: 0.2163 L12: 0.6329 REMARK 3 L13: 0.0443 L23: -0.0493 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0098 S13: 0.2042 REMARK 3 S21: -0.0484 S22: 0.0005 S23: 0.3690 REMARK 3 S31: 0.0510 S32: 0.1084 S33: 0.0238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WER COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-APR-09. REMARK 100 THE DEPOSITION ID IS D_1290039309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9700 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80579 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: IN-HOUSE HSP90 N-TERMINAL MODEL. REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.09650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.09650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 148.10600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 74.00700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -55.09650 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2075 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 34 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ILE 35 TO VAL REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LEU 34 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ILE 35 TO VAL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 215 REMARK 465 GLU A 216 REMARK 465 VAL A 217 REMARK 465 PRO A 218 REMARK 465 ILE A 219 REMARK 465 PRO A 220 REMARK 465 LYS B 215 REMARK 465 GLU B 216 REMARK 465 VAL B 217 REMARK 465 PRO B 218 REMARK 465 ILE B 219 REMARK 465 PRO B 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 SER A 99 OG REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 GLU B 71 CG CD OE1 OE2 REMARK 470 LYS B 98 CG CD CE NZ REMARK 470 SER B 99 OG REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 LYS B 211 CG CD CE NZ REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 97 O HOH A 2075 1.84 REMARK 500 O SER A 25 O HOH A 2026 1.92 REMARK 500 CB ALA A 202 O HOH B 2132 1.96 REMARK 500 O SER B 25 O HOH B 2022 1.96 REMARK 500 NE2 GLN B 9 O HOH B 2005 1.99 REMARK 500 NE2 GLN A 9 O HOH A 2075 2.00 REMARK 500 O THR B 13 O HOH B 2008 2.06 REMARK 500 O ALA B 97 O HOH B 2005 2.07 REMARK 500 CG2 VAL B 114 O HOH B 2074 2.08 REMARK 500 O HOH B 2022 O HOH B 2073 2.13 REMARK 500 O ASN B 21 O HOH B 2015 2.14 REMARK 500 OG SER A 198 O HOH A 2136 2.14 REMARK 500 O HOH A 2026 O HOH A 2082 2.15 REMARK 500 O ALA B 131 O HOH B 2081 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O SER B 99 O SER B 99 3554 1.39 REMARK 500 O SER A 99 O SER A 99 4565 1.42 REMARK 500 O HOH A 2024 O HOH B 2062 4565 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA B 97 N - CA - C ANGL. DEV. = 16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 16 -74.99 -52.29 REMARK 500 VAL A 23 -88.84 -66.32 REMARK 500 TYR A 24 -53.64 86.72 REMARK 500 GLU A 28 -15.27 -37.96 REMARK 500 GLU A 59 88.75 -169.96 REMARK 500 LYS A 98 113.83 36.56 REMARK 500 THR A 101 -70.60 -53.20 REMARK 500 LEU A 108 -52.42 -27.13 REMARK 500 SER A 109 26.58 -74.12 REMARK 500 ALA A 110 13.80 -140.17 REMARK 500 PHE A 200 50.70 -102.39 REMARK 500 MET B 16 -71.15 -51.83 REMARK 500 VAL B 23 -91.10 -67.54 REMARK 500 TYR B 24 -51.70 86.59 REMARK 500 LYS B 27 0.99 -67.02 REMARK 500 GLU B 28 -15.18 -36.09 REMARK 500 GLU B 59 89.92 -170.86 REMARK 500 ALA B 97 -6.94 -59.93 REMARK 500 LYS B 98 111.39 25.31 REMARK 500 THR B 101 -87.78 -59.92 REMARK 500 LYS B 102 -38.14 -37.36 REMARK 500 SER B 109 34.05 -76.99 REMARK 500 ALA B 110 11.81 -145.59 REMARK 500 PHE B 200 49.26 -100.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 16 SER A 17 -147.20 REMARK 500 MET B 16 SER B 17 -146.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2015 DISTANCE = 5.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RDC A 1215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RDC B 1215 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HK7 RELATED DB: PDB REMARK 900 MIDDLE DOMAIN OF HSP90 REMARK 900 RELATED ID: 1A4H RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE IN REMARK 900 COMPLEX WITH GELDANAMYCIN REMARK 900 RELATED ID: 1US7 RELATED DB: PDB REMARK 900 COMPLEX OF HSP90 AND P50 REMARK 900 RELATED ID: 2BRE RELATED DB: PDB REMARK 900 STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N-TERMINUS OF YEAST REMARK 900 HSP90. REMARK 900 RELATED ID: 2VWC RELATED DB: PDB REMARK 900 STRUCTURE OF THE HSP90 INHIBITOR MACBECIN BOUND TO THE N-TERMINUS REMARK 900 OF YEAST HSP90. REMARK 900 RELATED ID: 2CG9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX REMARK 900 RELATED ID: 1AH6 RELATED DB: PDB REMARK 900 STRUCTURE OF THE TETRAGONAL FORM OF THE N -TERMINAL DOMAIN OF THE REMARK 900 YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1BGQ RELATED DB: PDB REMARK 900 RADICICOL BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF REMARK 900 THE YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1USV RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90 REMARK 900 RELATED ID: 2IWS RELATED DB: PDB REMARK 900 RADICICOL ANALOGUES BOUND TO THE ATP SITE OF HSP90 REMARK 900 RELATED ID: 1AMW RELATED DB: PDB REMARK 900 ADP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE REMARK 900 RELATED ID: 1USU RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90 REMARK 900 RELATED ID: 2BRC RELATED DB: PDB REMARK 900 STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N-TERMINUS OF YEAST REMARK 900 HSP90. REMARK 900 RELATED ID: 1ZWH RELATED DB: PDB REMARK 900 YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITORRADESTER AMINE REMARK 900 RELATED ID: 2WEQ RELATED DB: PDB REMARK 900 YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH GELDANAMYCIN REMARK 900 RELATED ID: 2VW5 RELATED DB: PDB REMARK 900 STRUCTURE OF THE HSP90 INHIBITOR 7-O- CARBAMOYLPREMACBECIN BOUND TO REMARK 900 THE N- TERMINUS OF YEAST HSP90 REMARK 900 RELATED ID: 1AH8 RELATED DB: PDB REMARK 900 STRUCTURE OF THE ORTHORHOMBIC FORM OF THE N-TERMINAL DOMAIN OF THE REMARK 900 YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 2CGF RELATED DB: PDB REMARK 900 A RADICICOL ANALOGUE BOUND TO THE ATP BINDING SITE OF THE N- REMARK 900 TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1AM1 RELATED DB: PDB REMARK 900 ATP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE REMARK 900 RELATED ID: 2IWU RELATED DB: PDB REMARK 900 ANALOGUES OF RADICICOL BOUND TO THE ATP- BINDING SITE OF HSP90. REMARK 900 RELATED ID: 2VLS RELATED DB: PDB REMARK 900 STRUCTURE OF THE HSP90 INHIBITOR MACBECIN BOUND TO THE N-TERMINUS REMARK 900 OF YEAST HSP90. REMARK 900 RELATED ID: 2CGE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX REMARK 900 RELATED ID: 2IWX RELATED DB: PDB REMARK 900 ANALOGUES OF RADICICOL BOUND TO THE ATP- BINDING SITE OF HSP90. REMARK 900 RELATED ID: 2WEP RELATED DB: PDB REMARK 900 YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH ADP REMARK 900 RELATED ID: 2AKP RELATED DB: PDB REMARK 900 HSP90 DELTA24-N210 MUTANT REMARK 900 RELATED ID: 1ZW9 RELATED DB: PDB REMARK 900 YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITOR 8-(6-BROMO- REMARK 900 BENZO[1,3] DIOXOL-5-YLSULFANYL)-9-(3-ISOPROPYLAMINO- PROPYL)-ADENINE REMARK 999 REMARK 999 SEQUENCE REMARK 999 L34I, I35V MUTATIONS DBREF 2WER A 1 220 UNP P02829 HSP82_YEAST 1 220 DBREF 2WER B 1 220 UNP P02829 HSP82_YEAST 1 220 SEQADV 2WER ILE A 34 UNP P02829 LEU 34 ENGINEERED MUTATION SEQADV 2WER VAL A 35 UNP P02829 ILE 35 ENGINEERED MUTATION SEQADV 2WER ILE B 34 UNP P02829 LEU 34 ENGINEERED MUTATION SEQADV 2WER VAL B 35 UNP P02829 ILE 35 ENGINEERED MUTATION SEQRES 1 A 220 MET ALA SER GLU THR PHE GLU PHE GLN ALA GLU ILE THR SEQRES 2 A 220 GLN LEU MET SER LEU ILE ILE ASN THR VAL TYR SER ASN SEQRES 3 A 220 LYS GLU ILE PHE LEU ARG GLU ILE VAL SER ASN ALA SER SEQRES 4 A 220 ASP ALA LEU ASP LYS ILE ARG TYR LYS SER LEU SER ASP SEQRES 5 A 220 PRO LYS GLN LEU GLU THR GLU PRO ASP LEU PHE ILE ARG SEQRES 6 A 220 ILE THR PRO LYS PRO GLU GLN LYS VAL LEU GLU ILE ARG SEQRES 7 A 220 ASP SER GLY ILE GLY MET THR LYS ALA GLU LEU ILE ASN SEQRES 8 A 220 ASN LEU GLY THR ILE ALA LYS SER GLY THR LYS ALA PHE SEQRES 9 A 220 MET GLU ALA LEU SER ALA GLY ALA ASP VAL SER MET ILE SEQRES 10 A 220 GLY GLN PHE GLY VAL GLY PHE TYR SER LEU PHE LEU VAL SEQRES 11 A 220 ALA ASP ARG VAL GLN VAL ILE SER LYS SER ASN ASP ASP SEQRES 12 A 220 GLU GLN TYR ILE TRP GLU SER ASN ALA GLY GLY SER PHE SEQRES 13 A 220 THR VAL THR LEU ASP GLU VAL ASN GLU ARG ILE GLY ARG SEQRES 14 A 220 GLY THR ILE LEU ARG LEU PHE LEU LYS ASP ASP GLN LEU SEQRES 15 A 220 GLU TYR LEU GLU GLU LYS ARG ILE LYS GLU VAL ILE LYS SEQRES 16 A 220 ARG HIS SER GLU PHE VAL ALA TYR PRO ILE GLN LEU VAL SEQRES 17 A 220 VAL THR LYS GLU VAL GLU LYS GLU VAL PRO ILE PRO SEQRES 1 B 220 MET ALA SER GLU THR PHE GLU PHE GLN ALA GLU ILE THR SEQRES 2 B 220 GLN LEU MET SER LEU ILE ILE ASN THR VAL TYR SER ASN SEQRES 3 B 220 LYS GLU ILE PHE LEU ARG GLU ILE VAL SER ASN ALA SER SEQRES 4 B 220 ASP ALA LEU ASP LYS ILE ARG TYR LYS SER LEU SER ASP SEQRES 5 B 220 PRO LYS GLN LEU GLU THR GLU PRO ASP LEU PHE ILE ARG SEQRES 6 B 220 ILE THR PRO LYS PRO GLU GLN LYS VAL LEU GLU ILE ARG SEQRES 7 B 220 ASP SER GLY ILE GLY MET THR LYS ALA GLU LEU ILE ASN SEQRES 8 B 220 ASN LEU GLY THR ILE ALA LYS SER GLY THR LYS ALA PHE SEQRES 9 B 220 MET GLU ALA LEU SER ALA GLY ALA ASP VAL SER MET ILE SEQRES 10 B 220 GLY GLN PHE GLY VAL GLY PHE TYR SER LEU PHE LEU VAL SEQRES 11 B 220 ALA ASP ARG VAL GLN VAL ILE SER LYS SER ASN ASP ASP SEQRES 12 B 220 GLU GLN TYR ILE TRP GLU SER ASN ALA GLY GLY SER PHE SEQRES 13 B 220 THR VAL THR LEU ASP GLU VAL ASN GLU ARG ILE GLY ARG SEQRES 14 B 220 GLY THR ILE LEU ARG LEU PHE LEU LYS ASP ASP GLN LEU SEQRES 15 B 220 GLU TYR LEU GLU GLU LYS ARG ILE LYS GLU VAL ILE LYS SEQRES 16 B 220 ARG HIS SER GLU PHE VAL ALA TYR PRO ILE GLN LEU VAL SEQRES 17 B 220 VAL THR LYS GLU VAL GLU LYS GLU VAL PRO ILE PRO HET RDC A1215 25 HET RDC B1215 25 HETNAM RDC RADICICOL HETSYN RDC MONORDEN FORMUL 3 RDC 2(C18 H17 CL O6) FORMUL 5 HOH *284(H2 O) HELIX 1 1 GLN A 9 VAL A 23 1 15 HELIX 2 2 GLU A 28 LEU A 50 1 23 HELIX 3 3 ASP A 52 GLU A 59 5 8 HELIX 4 4 PRO A 70 GLN A 72 5 3 HELIX 5 5 THR A 85 LEU A 93 1 9 HELIX 6 6 GLY A 100 SER A 109 1 10 HELIX 7 7 ASP A 113 GLY A 121 5 9 HELIX 8 8 VAL A 122 LEU A 129 5 8 HELIX 9 9 GLN A 181 LEU A 185 5 5 HELIX 10 10 GLU A 186 SER A 198 1 13 HELIX 11 11 GLN B 9 VAL B 23 1 15 HELIX 12 12 GLU B 28 LEU B 50 1 23 HELIX 13 13 ASP B 52 GLU B 59 5 8 HELIX 14 14 PRO B 70 GLN B 72 5 3 HELIX 15 15 THR B 85 LEU B 93 1 9 HELIX 16 16 GLY B 100 SER B 109 1 10 HELIX 17 17 ASP B 113 GLY B 121 5 9 HELIX 18 18 VAL B 122 LEU B 129 5 8 HELIX 19 19 GLN B 181 LEU B 185 5 5 HELIX 20 20 GLU B 186 SER B 198 1 13 SHEET 1 AA 8 GLU A 4 GLU A 7 0 SHEET 2 AA 8 SER A 155 LEU A 160 -1 O PHE A 156 N PHE A 6 SHEET 3 AA 8 TYR A 146 SER A 150 -1 O ILE A 147 N THR A 159 SHEET 4 AA 8 ALA A 131 LYS A 139 -1 O VAL A 134 N SER A 150 SHEET 5 AA 8 GLY A 170 LEU A 177 -1 O GLY A 170 N LYS A 139 SHEET 6 AA 8 VAL A 74 ASP A 79 -1 O LEU A 75 N LEU A 175 SHEET 7 AA 8 ILE A 64 LYS A 69 -1 O ARG A 65 N ARG A 78 SHEET 8 AA 8 ILE A 205 LEU A 207 1 O GLN A 206 N ILE A 66 SHEET 1 BA 8 GLU B 4 GLU B 7 0 SHEET 2 BA 8 SER B 155 LEU B 160 -1 O PHE B 156 N PHE B 6 SHEET 3 BA 8 TYR B 146 SER B 150 -1 O ILE B 147 N THR B 159 SHEET 4 BA 8 ALA B 131 LYS B 139 -1 O VAL B 134 N SER B 150 SHEET 5 BA 8 GLY B 170 LEU B 177 -1 O GLY B 170 N LYS B 139 SHEET 6 BA 8 VAL B 74 ASP B 79 -1 O LEU B 75 N LEU B 175 SHEET 7 BA 8 ILE B 64 LYS B 69 -1 O ARG B 65 N ARG B 78 SHEET 8 BA 8 ILE B 205 LEU B 207 1 O GLN B 206 N ILE B 66 SITE 1 AC1 15 ASN A 37 ASP A 40 ALA A 41 LYS A 44 SITE 2 AC1 15 ASP A 79 ILE A 82 MET A 84 ASN A 92 SITE 3 AC1 15 LEU A 93 PHE A 124 THR A 171 LEU A 173 SITE 4 AC1 15 HOH A2071 HOH A2143 HOH A2144 SITE 1 AC2 14 ASN B 37 ASP B 40 ALA B 41 LYS B 44 SITE 2 AC2 14 ASP B 79 ILE B 82 MET B 84 LEU B 93 SITE 3 AC2 14 PHE B 124 THR B 171 LEU B 173 HOH B2117 SITE 4 AC2 14 HOH B2138 HOH B2140 CRYST1 74.007 74.053 110.193 90.00 90.00 90.00 P 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013512 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009075 0.00000