HEADER HYDROLASE 18-JUN-09 2WKW TITLE ALCALIGENES ESTERASE COMPLEXED WITH PRODUCT ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYLESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ESTERASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALCALIGENES SP.; SOURCE 3 ORGANISM_TAXID: 512; SOURCE 4 EXPRESSION_SYSTEM: AGROBACTERIUM SP.; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 361 KEYWDS HYDROLASE, HYDROLASE(CARBOXYLIC ESTERASE), ESTERASE, ATOMIC KEYWDS 2 RESOLUTION, ALPHA/BETA HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.C.BOURNE,M.N.ISUPOV,J.A.LITTLECHILD REVDAT 4 13-DEC-23 2WKW 1 REMARK REVDAT 3 24-JUL-19 2WKW 1 REMARK REVDAT 2 05-FEB-14 2WKW 1 JRNL REMARK VERSN HETNAM REVDAT 2 2 1 HETSYN FORMUL REVDAT 1 30-JUN-09 2WKW 0 JRNL AUTH P.C.BOURNE,M.N.ISUPOV,J.A.LITTLECHILD JRNL TITL THE ATOMIC-RESOLUTION STRUCTURE OF A NOVEL BACTERIAL JRNL TITL 2 ESTERASE. JRNL REF STRUCTURE V. 8 143 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 10673440 JRNL DOI 10.1016/S0969-2126(00)00090-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.C.BOURNE,M.N.ISUPOV,J.A.LITTLECHILD REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF REMARK 1 TITL 2 A NOVEL BACTERIAL ESTERASE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 55 915 1999 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 10089333 REMARK 1 DOI 10.1107/S0907444998018459 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 54468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2910 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3942 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1840 REMARK 3 BIN FREE R VALUE SET COUNT : 211 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4830 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 111 REMARK 3 SOLVENT ATOMS : 700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.10000 REMARK 3 B22 (A**2) : -2.37000 REMARK 3 B33 (A**2) : -1.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5188 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7094 ; 1.242 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 666 ; 5.700 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;35.912 ;23.679 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 812 ;12.613 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;11.668 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 768 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3967 ; 0.006 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3199 ; 2.021 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5185 ; 2.960 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1989 ; 4.470 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1890 ; 5.424 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE CRYSTALS WERE SOAKED WITH THE PRODUCT ANALOGUE REMARK 3 IODINATED AT THE PHENOL RING. HOWEVER NO TRACE OF IODINATION WAS REMARK 3 OBSERVED IN THE STRUCTURE REMARK 4 REMARK 4 2WKW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1290040158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9076 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57445 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1QLW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% (NH4)2SO4, 10 MM TRIS HCL, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.79850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.57200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.90550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.57200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.79850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.90550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 PRO A 4 REMARK 465 VAL A 5 REMARK 465 PRO A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 323 REMARK 465 PRO A 324 REMARK 465 ALA A 325 REMARK 465 HIS A 326 REMARK 465 GLY A 327 REMARK 465 ARG A 328 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 PRO B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 PRO B 6 REMARK 465 LYS B 7 REMARK 465 LYS B 323 REMARK 465 PRO B 324 REMARK 465 ALA B 325 REMARK 465 HIS B 326 REMARK 465 GLY B 327 REMARK 465 ARG B 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 -8.36 80.60 REMARK 500 THR A 74 -166.72 -128.99 REMARK 500 GLU A 79 -153.61 -89.85 REMARK 500 PRO A 152 40.25 -107.26 REMARK 500 SER A 206 -112.04 61.04 REMARK 500 ASN A 219 111.31 -163.94 REMARK 500 GLU A 230 58.98 38.63 REMARK 500 MET A 299 51.63 -95.94 REMARK 500 PRO B 9 104.10 -58.55 REMARK 500 ASP B 48 -5.99 79.04 REMARK 500 GLU B 79 -155.88 -86.67 REMARK 500 ALA B 125 149.84 -174.45 REMARK 500 SER B 206 -114.96 60.93 REMARK 500 ASN B 219 117.47 -162.54 REMARK 500 GLU B 230 60.95 37.38 REMARK 500 MET B 299 51.60 -90.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 102 ASP A 103 148.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2043 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A2048 DISTANCE = 6.06 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE W22 A 577 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE W22 B 577 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1326 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1326 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1327 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1327 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1328 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1329 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1328 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1330 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QLW RELATED DB: PDB REMARK 900 THE ATOMIC RESOLUTION STRUCTURE OF A NOVEL BACTERIAL ESTERASE DBREF 2WKW A 1 328 UNP Q7SIA5 Q7SIA5_ALCSP 1 328 DBREF 2WKW B 1 328 UNP Q7SIA5 Q7SIA5_ALCSP 1 328 SEQRES 1 A 328 ALA PRO PRO PRO VAL PRO LYS THR PRO ALA GLY PRO LEU SEQRES 2 A 328 THR LEU SER GLY GLN GLY SER PHE PHE VAL GLY GLY ARG SEQRES 3 A 328 ASP VAL THR SER GLU THR LEU SER LEU SER PRO LYS TYR SEQRES 4 A 328 ASP ALA HIS GLY THR VAL THR VAL ASP GLN MET TYR VAL SEQRES 5 A 328 ARG TYR GLN ILE PRO GLN ARG ALA LYS ARG TYR PRO ILE SEQRES 6 A 328 THR LEU ILE HIS GLY CYS CYS LEU THR GLY MET THR TRP SEQRES 7 A 328 GLU THR THR PRO ASP GLY ARG MET GLY TRP ASP GLU TYR SEQRES 8 A 328 PHE LEU ARG LYS GLY TYR SER THR TYR VAL ILE ASP GLN SEQRES 9 A 328 SER GLY ARG GLY ARG SER ALA THR ASP ILE SER ALA ILE SEQRES 10 A 328 ASN ALA VAL LYS LEU GLY LYS ALA PRO ALA SER SER LEU SEQRES 11 A 328 PRO ASP LEU PHE ALA ALA GLY HIS GLU ALA ALA TRP ALA SEQRES 12 A 328 ILE PHE ARG PHE GLY PRO ARG TYR PRO ASP ALA PHE LYS SEQRES 13 A 328 ASP THR GLN PHE PRO VAL GLN ALA GLN ALA GLU LEU TRP SEQRES 14 A 328 GLN GLN MET VAL PRO ASP TRP LEU GLY SER MET PRO THR SEQRES 15 A 328 PRO ASN PRO THR VAL ALA ASN LEU SER LYS LEU ALA ILE SEQRES 16 A 328 LYS LEU ASP GLY THR VAL LEU LEU SER HIS SER GLN SER SEQRES 17 A 328 GLY ILE TYR PRO PHE GLN THR ALA ALA MET ASN PRO LYS SEQRES 18 A 328 GLY ILE THR ALA ILE VAL SER VAL GLU PRO GLY GLU CYS SEQRES 19 A 328 PRO LYS PRO GLU ASP VAL LYS PRO LEU THR SER ILE PRO SEQRES 20 A 328 VAL LEU VAL VAL PHE GLY ASP HIS ILE GLU GLU PHE PRO SEQRES 21 A 328 ARG TRP ALA PRO ARG LEU LYS ALA CYS HIS ALA PHE ILE SEQRES 22 A 328 ASP ALA LEU ASN ALA ALA GLY GLY LYS GLY GLN LEU MET SEQRES 23 A 328 SER LEU PRO ALA LEU GLY VAL HIS GLY ASN SER HIS MET SEQRES 24 A 328 MET MET GLN ASP ARG ASN ASN LEU GLN VAL ALA ASP LEU SEQRES 25 A 328 ILE LEU ASP TRP ILE GLY ARG ASN THR ALA LYS PRO ALA SEQRES 26 A 328 HIS GLY ARG SEQRES 1 B 328 ALA PRO PRO PRO VAL PRO LYS THR PRO ALA GLY PRO LEU SEQRES 2 B 328 THR LEU SER GLY GLN GLY SER PHE PHE VAL GLY GLY ARG SEQRES 3 B 328 ASP VAL THR SER GLU THR LEU SER LEU SER PRO LYS TYR SEQRES 4 B 328 ASP ALA HIS GLY THR VAL THR VAL ASP GLN MET TYR VAL SEQRES 5 B 328 ARG TYR GLN ILE PRO GLN ARG ALA LYS ARG TYR PRO ILE SEQRES 6 B 328 THR LEU ILE HIS GLY CYS CYS LEU THR GLY MET THR TRP SEQRES 7 B 328 GLU THR THR PRO ASP GLY ARG MET GLY TRP ASP GLU TYR SEQRES 8 B 328 PHE LEU ARG LYS GLY TYR SER THR TYR VAL ILE ASP GLN SEQRES 9 B 328 SER GLY ARG GLY ARG SER ALA THR ASP ILE SER ALA ILE SEQRES 10 B 328 ASN ALA VAL LYS LEU GLY LYS ALA PRO ALA SER SER LEU SEQRES 11 B 328 PRO ASP LEU PHE ALA ALA GLY HIS GLU ALA ALA TRP ALA SEQRES 12 B 328 ILE PHE ARG PHE GLY PRO ARG TYR PRO ASP ALA PHE LYS SEQRES 13 B 328 ASP THR GLN PHE PRO VAL GLN ALA GLN ALA GLU LEU TRP SEQRES 14 B 328 GLN GLN MET VAL PRO ASP TRP LEU GLY SER MET PRO THR SEQRES 15 B 328 PRO ASN PRO THR VAL ALA ASN LEU SER LYS LEU ALA ILE SEQRES 16 B 328 LYS LEU ASP GLY THR VAL LEU LEU SER HIS SER GLN SER SEQRES 17 B 328 GLY ILE TYR PRO PHE GLN THR ALA ALA MET ASN PRO LYS SEQRES 18 B 328 GLY ILE THR ALA ILE VAL SER VAL GLU PRO GLY GLU CYS SEQRES 19 B 328 PRO LYS PRO GLU ASP VAL LYS PRO LEU THR SER ILE PRO SEQRES 20 B 328 VAL LEU VAL VAL PHE GLY ASP HIS ILE GLU GLU PHE PRO SEQRES 21 B 328 ARG TRP ALA PRO ARG LEU LYS ALA CYS HIS ALA PHE ILE SEQRES 22 B 328 ASP ALA LEU ASN ALA ALA GLY GLY LYS GLY GLN LEU MET SEQRES 23 B 328 SER LEU PRO ALA LEU GLY VAL HIS GLY ASN SER HIS MET SEQRES 24 B 328 MET MET GLN ASP ARG ASN ASN LEU GLN VAL ALA ASP LEU SEQRES 25 B 328 ILE LEU ASP TRP ILE GLY ARG ASN THR ALA LYS PRO ALA SEQRES 26 B 328 HIS GLY ARG HET W22 A 577 17 HET SO4 A1323 5 HET SO4 A1324 5 HET GOL A1325 6 HET GOL A1326 6 HET GOL A1327 6 HET SO4 A1328 5 HET SO4 A1329 5 HET GOL A1330 6 HET W22 B 577 17 HET SO4 B1323 5 HET GOL B1324 6 HET GOL B1325 6 HET SO4 B1326 5 HET GOL B1327 6 HET SO4 B1328 5 HETNAM W22 [(2S)-4-METHYL-3-OXO-2,3,4,5-TETRAHYDRO-1H-1,4- HETNAM 2 W22 BENZODIAZEPIN-2-YL]ACETIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 W22 2(C12 H14 N2 O3) FORMUL 4 SO4 7(O4 S 2-) FORMUL 6 GOL 7(C3 H8 O3) FORMUL 19 HOH *700(H2 O) HELIX 1 1 THR A 74 GLU A 79 5 6 HELIX 2 2 GLY A 87 LYS A 95 1 9 HELIX 3 3 ILE A 114 LEU A 122 1 9 HELIX 4 4 PRO A 126 LEU A 130 5 5 HELIX 5 5 GLY A 137 PHE A 145 1 9 HELIX 6 6 PRO A 161 GLN A 163 5 3 HELIX 7 7 ALA A 164 MET A 172 1 9 HELIX 8 8 TRP A 176 MET A 180 5 5 HELIX 9 9 ASN A 184 ASP A 198 1 15 HELIX 10 10 GLN A 207 GLY A 209 5 3 HELIX 11 11 ILE A 210 ASN A 219 1 10 HELIX 12 12 LYS A 236 VAL A 240 5 5 HELIX 13 13 VAL A 240 THR A 244 5 5 HELIX 14 14 TRP A 262 ALA A 279 1 18 HELIX 15 15 PRO A 289 GLY A 292 5 4 HELIX 16 16 MET A 299 ASP A 303 5 5 HELIX 17 17 ASN A 305 ALA A 322 1 18 HELIX 18 18 THR B 74 GLU B 79 5 6 HELIX 19 19 GLY B 87 LYS B 95 1 9 HELIX 20 20 ILE B 114 GLY B 123 1 10 HELIX 21 21 PRO B 126 LEU B 130 5 5 HELIX 22 22 GLY B 137 PHE B 145 1 9 HELIX 23 23 PRO B 161 GLN B 163 5 3 HELIX 24 24 ALA B 164 GLN B 171 1 8 HELIX 25 25 TRP B 176 MET B 180 5 5 HELIX 26 26 ASN B 184 ASP B 198 1 15 HELIX 27 27 GLN B 207 GLY B 209 5 3 HELIX 28 28 ILE B 210 ASN B 219 1 10 HELIX 29 29 LYS B 236 VAL B 240 5 5 HELIX 30 30 VAL B 240 THR B 244 5 5 HELIX 31 31 TRP B 262 ALA B 279 1 18 HELIX 32 32 PRO B 289 GLY B 292 5 4 HELIX 33 33 MET B 299 ASP B 303 5 5 HELIX 34 34 ASN B 305 THR B 321 1 17 SHEET 1 AA16 GLY A 283 SER A 287 0 SHEET 2 AA16 VAL A 248 PHE A 252 1 O VAL A 248 N GLN A 284 SHEET 3 AA16 ILE A 223 VAL A 229 1 O ILE A 226 N LEU A 249 SHEET 4 AA16 THR A 200 HIS A 205 1 O THR A 200 N THR A 224 SHEET 5 AA16 ILE A 65 ILE A 68 1 O THR A 66 N LEU A 203 SHEET 6 AA16 THR A 99 ASP A 103 1 O TYR A 100 N LEU A 67 SHEET 7 AA16 MET A 50 PRO A 57 -1 O TYR A 51 N ASP A 103 SHEET 8 AA16 LEU A 13 VAL A 23 -1 N SER A 16 O ILE A 56 SHEET 9 AA16 LEU B 13 VAL B 23 -1 O LEU B 13 N LEU A 15 SHEET 10 AA16 MET B 50 PRO B 57 -1 O MET B 50 N VAL B 23 SHEET 11 AA16 THR B 99 ASP B 103 -1 O THR B 99 N GLN B 55 SHEET 12 AA16 ILE B 65 ILE B 68 1 O ILE B 65 N TYR B 100 SHEET 13 AA16 THR B 200 HIS B 205 1 O VAL B 201 N THR B 66 SHEET 14 AA16 ILE B 223 VAL B 229 1 N THR B 224 O THR B 200 SHEET 15 AA16 VAL B 248 PHE B 252 1 O LEU B 249 N SER B 228 SHEET 16 AA16 GLY B 283 SER B 287 1 O GLN B 284 N VAL B 250 SHEET 1 AB 2 ARG A 26 SER A 30 0 SHEET 2 AB 2 GLY A 43 VAL A 47 -1 O GLY A 43 N SER A 30 SHEET 1 BA 2 ARG B 26 SER B 30 0 SHEET 2 BA 2 GLY B 43 VAL B 47 -1 O GLY B 43 N SER B 30 SSBOND 1 CYS A 71 CYS A 72 1555 1555 2.06 SSBOND 2 CYS A 234 CYS A 269 1555 1555 2.02 SSBOND 3 CYS B 71 CYS B 72 1555 1555 2.06 SSBOND 4 CYS B 234 CYS B 269 1555 1555 2.05 CISPEP 1 TYR A 151 PRO A 152 0 -1.48 CISPEP 2 THR A 182 PRO A 183 0 -1.10 CISPEP 3 TYR B 151 PRO B 152 0 -3.35 CISPEP 4 THR B 182 PRO B 183 0 -0.10 SITE 1 AC1 5 SER B 16 GLN B 58 ARG B 59 HOH B2077 SITE 2 AC1 5 HOH B2330 SITE 1 AC2 4 SER A 16 ARG A 59 HOH A2352 HOH A2353 SITE 1 AC3 10 CYS A 71 ALA A 136 ILE A 144 PHE A 145 SITE 2 AC3 10 SER A 206 GLN A 207 ARG A 261 ARG A 265 SITE 3 AC3 10 HIS A 298 HOH A2351 SITE 1 AC4 10 CYS B 71 ALA B 136 ILE B 144 PHE B 145 SITE 2 AC4 10 SER B 206 GLN B 207 ARG B 261 ARG B 265 SITE 3 AC4 10 HIS B 298 HOH B2328 SITE 1 AC5 6 ASP B 254 HIS B 255 ILE B 256 GLU B 257 SITE 2 AC5 6 GLU B 258 HOH B2331 SITE 1 AC6 4 PHE B 155 LYS B 156 ASP B 157 HIS B 255 SITE 1 AC7 5 TYR A 54 HOH A2354 HOH A2356 THR B 80 SITE 2 AC7 5 GLY B 84 SITE 1 AC8 8 ASP A 254 HIS A 255 ILE A 256 GLU A 257 SITE 2 AC8 8 GLU A 258 HOH A2357 HOH A2358 HOH A2359 SITE 1 AC9 4 THR A 80 GLY A 84 TYR B 54 HOH B2333 SITE 1 BC1 5 PRO A 82 ASP A 83 GLU A 167 HOH A2360 SITE 2 BC1 5 HOH B2333 SITE 1 BC2 6 THR A 80 GLU A 90 HOH A2123 HOH A2125 SITE 2 BC2 6 GLN B 18 GLY B 19 SITE 1 BC3 7 GLN A 18 GLY A 19 HOH A2011 THR B 80 SITE 2 BC3 7 GLU B 90 HOH B2126 HOH B2335 SITE 1 BC4 10 ILE A 210 PHE A 213 GLN A 214 PRO A 235 SITE 2 BC4 10 ASP A 239 HOH A2264 HOH A2284 HOH A2361 SITE 3 BC4 10 PRO B 126 SER B 128 SITE 1 BC5 7 ARG A 319 HOH A2362 HOH A2363 GLN B 284 SITE 2 BC5 7 LEU B 285 HOH B2286 HOH B2288 SITE 1 BC6 8 ILE A 273 GLN A 284 LEU A 285 HOH A2312 SITE 2 BC6 8 HOH A2316 ARG B 319 HOH B2336 HOH B2337 SITE 1 BC7 5 GLY A 123 ALA A 125 PRO A 126 GLN A 163 SITE 2 BC7 5 GLN A 165 CRYST1 57.597 115.811 131.144 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017362 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007625 0.00000 MTRIX1 1 -0.972180 -0.010390 -0.234000 8.01847 1 MTRIX2 1 0.003150 -0.999500 0.031310 73.07857 1 MTRIX3 1 -0.234210 0.029700 0.971730 -0.18449 1