HEADER TRANSCRIPTION 12-AUG-09 2WQ1 TITLE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS TITLE 2 COORDINATING BROMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COILED-COIL DOMAIN, RESIDUES 249-281; COMPND 5 SYNONYM: AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN, GCN4 COMPND 6 LEUCINE ZIPPER MUTANT; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 4932 KEYWDS TAA, NUCLEUS, COILED COIL, DNA-BINDING, PROTEIN EXPORT, ION KEYWDS 2 COORDINATION, POLAR CORE RESIDUES, TRIMERIC KEYWDS 3 AUTOTRANSPORTER ADHESIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.D.HARTMANN,B.HERNANDEZ ALVAREZ,A.N.LUPAS REVDAT 1 03-NOV-09 2WQ1 0 JRNL AUTH M.D.HARTMANN,O.RIDDERBUSCH,K.ZETH,R.ALBRECHT, JRNL AUTH 2 O.TESTA,D.N.WOOLFSON,G.SAUER,S.DUNIN-HORKAWICZ, JRNL AUTH 3 A.N.LUPAS,B.H.ALVAREZ JRNL TITL A COILED-COIL MOTIF THAT SEQUESTERS IONS TO THE JRNL TITL 2 HYDROPHOBIC CORE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 16950 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19805097 JRNL DOI 10.1073/PNAS.0907256106 REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.85 REMARK 3 NUMBER OF REFLECTIONS : 12350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.12938 REMARK 3 R VALUE (WORKING SET) : 0.12741 REMARK 3 FREE R VALUE : 0.16748 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 657 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.082 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.110 REMARK 3 REFLECTION IN BIN (WORKING SET) : 921 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.203 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.258 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 361 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 70 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.580 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.032 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.035 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.021 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.913 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 366 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 247 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 495 ; 1.834 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 620 ; 1.259 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 45 ; 4.897 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 21 ;36.995 ;28.095 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 84 ;14.385 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;11.299 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 58 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 402 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 55 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 83 ; 0.385 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 220 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 126 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 174 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 40 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.091 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.281 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.191 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 254 ; 5.237 ;24.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 91 ; 3.975 ;24.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 369 ; 5.732 ;32.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 145 ; 6.889 ;48.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 125 ; 8.820 ;72.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 658 ; 2.924 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 73 ; 8.898 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 608 ; 6.026 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2WQ1 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-AUG-09. REMARK 100 THE PDBE ID CODE IS EBI-40737. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.08 REMARK 200 RESOLUTION RANGE LOW (A) : 18.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.11 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.97 REMARK 200 R MERGE FOR SHELL (I) : 0.66 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.01 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 200 MM REMARK 280 NABR, 100 MM BIS-TRIS PROPANE PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 28.29000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 28.29000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 28.29000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 28.29000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 28.29000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.49 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 BR BR A1033 LIES ON A SPECIAL POSITION. REMARK 375 BR BR A1034 LIES ON A SPECIAL POSITION. REMARK 375 BR BR A1035 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2010 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2031 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, VAL 257 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 260 TO ASN REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 261 TO THR REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASN 264 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 267 TO ASN REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 268 TO THR REMARK 400 ENGINEERED RESIDUE IN CHAIN A, VAL 271 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 274 TO ASN REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 275 TO THR REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 33 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 1 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 3 CD CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1033 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1034 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A1035 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RB5 RELATED DB: PDB REMARK 900 ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER REMARK 900 CORE MUTANT ASN16A TRIGONAL FORM REMARK 900 RELATED ID: 1GCM RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER CORE MUTANT P-LI REMARK 900 RELATED ID: 1UNT RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1LLM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA REMARK 900 BOUND TO DNA REMARK 900 RELATED ID: 2ZTA RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER REMARK 900 RELATED ID: 1UNW RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1UO2 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 2CCF RELATED DB: PDB REMARK 900 ANTIPARALLEL CONFIGURATION OF PLI E20S REMARK 900 RELATED ID: 1CE9 RELATED DB: PDB REMARK 900 HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER REMARK 900 RELATED ID: 2WG6 RELATED DB: PDB REMARK 900 PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- REMARK 900 DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS REMARK 900 FUSED TO GCN4, P61A MUTANT REMARK 900 RELATED ID: 1TMZ RELATED DB: PDB REMARK 900 TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- REMARK 900 TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1ZIL RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN REMARK 900 THE DIMERIC STATE REMARK 900 RELATED ID: 2CCN RELATED DB: PDB REMARK 900 PLI E20C IS ANTIPARALLEL REMARK 900 RELATED ID: 1W5L RELATED DB: PDB REMARK 900 AN ANTI-PARALLEL TO PARALLEL SWITCH. REMARK 900 RELATED ID: 1RB6 RELATED DB: PDB REMARK 900 ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER REMARK 900 CORE MUTANT ASN16A TETRAGONAL FORM REMARK 900 RELATED ID: 1ZIJ RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN REMARK 900 THE TRIMERIC STATE REMARK 900 RELATED ID: 1UNZ RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1W5K RELATED DB: PDB REMARK 900 AN ANTI-PARALLEL FOUR HELIX BUNDLE REMARK 900 RELATED ID: 1PIQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC REMARK 900 COILED COIL WITH BURIED POLAR RESIDUES REMARK 900 RELATED ID: 1UNX RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1UNY RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1ZIK RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN REMARK 900 THE DIMERIC STATE REMARK 900 RELATED ID: 1YSA RELATED DB: PDB REMARK 900 GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX REMARK 900 WITH AP-1 DEOXYRIBONUCLEIC ACID REMARK 900 RELATED ID: 1W5H RELATED DB: PDB REMARK 900 AN ANTI-PARALLEL FOUR HELIX BUNDLE. REMARK 900 RELATED ID: 1IJ2 RELATED DB: PDB REMARK 900 GCN4-PVTL COILED-COIL TRIMER WITH THREONINE REMARK 900 AT THE A(16)POSITION REMARK 900 RELATED ID: 1UNV RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1UO3 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 2CCE RELATED DB: PDB REMARK 900 PARALLEL CONFIGURATION OF PLI E20S REMARK 900 RELATED ID: 1IJ0 RELATED DB: PDB REMARK 900 COILED COIL TRIMER GCN4-PVLS SER AT BURIED REMARK 900 D POSITION REMARK 900 RELATED ID: 1W5G RELATED DB: PDB REMARK 900 AN ANTI-PARALLEL FOUR HELIX BUNDLE ( REMARK 900 ACETIMIDE MODIFICATION). REMARK 900 RELATED ID: 1UNU RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 2B22 RELATED DB: PDB REMARK 900 ANTIPARALLEL FOUR-STRANDED COILED COIL REMARK 900 SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REMARK 900 REPEAT REMARK 900 RELATED ID: 1LD4 RELATED DB: PDB REMARK 900 PLACEMENT OF THE STRUCTURAL PROTEINS IN REMARK 900 SINDBIS VIRUS REMARK 900 RELATED ID: 2B1F RELATED DB: PDB REMARK 900 ANTIPARALLEL FOUR-STRANDED COILED COIL REMARK 900 SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REMARK 900 REPEAT REMARK 900 RELATED ID: 1UO0 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 2WG5 RELATED DB: PDB REMARK 900 PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- REMARK 900 DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS REMARK 900 FUSED TO GCN4 REMARK 900 RELATED ID: 1UO1 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1SWI RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A REMARK 900 COMPLEXED WITH BENZENE REMARK 900 RELATED ID: 1W5I RELATED DB: PDB REMARK 900 ABA DOES NOT AFFECT TOPOLOGY OF PLI. REMARK 900 RELATED ID: 2DGC RELATED DB: PDB REMARK 900 GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED REMARK 900 WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID REMARK 900 RELATED ID: 1NKN RELATED DB: PDB REMARK 900 VISUALIZING AN UNSTABLE COILED COIL: THE REMARK 900 CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF REMARK 900 THE SCALLOP MYOSIN ROD REMARK 900 RELATED ID: 2D3E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE C-TERMINAL FRAGMENT REMARK 900 OF RABBITSKELETAL ALPHA-TROPOMYOSIN REMARK 900 RELATED ID: 1GCL RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER CORE MUTANT P-LI REMARK 900 RELATED ID: 1ZII RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN REMARK 900 THE DIMERIC STATE REMARK 900 RELATED ID: 1KQL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE C-TERMINAL REGION REMARK 900 OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 REMARK 900 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 1UO5 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1RB4 RELATED DB: PDB REMARK 900 ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER REMARK 900 CORE MUTANT ASN16A TETRAGONAL AUTOMATIC REMARK 900 SOLUTION REMARK 900 RELATED ID: 1IHQ RELATED DB: PDB REMARK 900 GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE REMARK 900 N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN REMARK 900 WITH THE N-TERMINUS ENCODED BYEXON 1B REMARK 900 RELATED ID: 1UO4 RELATED DB: PDB REMARK 900 STRUCTURE BASED ENGINEERING OF INTERNAL REMARK 900 MOLECULAR SURFACES OF FOUR HELIX BUNDLES REMARK 900 RELATED ID: 1IJ3 RELATED DB: PDB REMARK 900 GCN4-PVSL COILED-COIL TRIMER WITH SERINE REMARK 900 AT THE A(16)POSITION REMARK 900 RELATED ID: 1ZTA RELATED DB: PDB REMARK 900 LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES) REMARK 900 RELATED ID: 1W5J RELATED DB: PDB REMARK 900 AN ANTI-PARALLEL FOUR HELIX BUNDLE REMARK 900 RELATED ID: 1IJ1 RELATED DB: PDB REMARK 900 GCN4-PVLT COILED-COIL TRIMER WITH THREONINE REMARK 900 AT THE D(12)POSITION REMARK 900 RELATED ID: 1DGC RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC REMARK 900 ATF/CREB SITE DEOXYRIBONUCLEIC ACID REMARK 900 RELATED ID: 1RB1 RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A REMARK 900 TRIGONAL AUTOMATICSOLUTION REMARK 900 RELATED ID: 1ZIM RELATED DB: PDB REMARK 900 GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN REMARK 900 THE TRIMERIC STATE REMARK 900 RELATED ID: 1GZL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A REMARK 900 CROSS-LINKED INHIBITOR OF HIV-1 ENTRY REMARK 900 BOUND TO THE GP41 HYDROPHOBIC POCKET REMARK 900 RELATED ID: 2BNI RELATED DB: PDB REMARK 900 PLI MUTANT E20C L16G Y17H, ANTIPARALLEL REMARK 900 RELATED ID: 2WPS RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SADA 483-523 FUSED TO REMARK 900 GCN4 ADAPTORS (SADAK3B-V2, OUT-OF-REGISTER REMARK 900 FUSION) REMARK 900 RELATED ID: 2WPZ RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER MUTANT WITH TWO VXXNXXX REMARK 900 MOTIFS COORDINATING CHLORIDE REMARK 900 RELATED ID: 2WPY RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER MUTANT WITH ONE VXXNXXX REMARK 900 MOTIF COORDINATING CHLORIDE REMARK 900 RELATED ID: 2WQ0 RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER MUTANT WITH THREE REMARK 900 IXXNTXX MOTIFS COORDINATING CHLORIDE REMARK 900 RELATED ID: 2WQ3 RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER MUTANT WITH THREE REMARK 900 IXXNTXX MOTIFS COORDINATING CHLORIDE AND REMARK 900 NITRATE REMARK 900 RELATED ID: 2WPQ RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SADA 479-519 FUSED TO REMARK 900 GCN4 ADAPTORS (SADAK3, IN-REGISTER FUSION) REMARK 900 RELATED ID: 2WQ2 RELATED DB: PDB REMARK 900 GCN4 LEUCINE ZIPPER MUTANT WITH THREE REMARK 900 IXXNTXX MOTIFS COORDINATING IODIDE REMARK 900 RELATED ID: 2WPR RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SADA 483-523 FUSED TO REMARK 900 GCN4 ADAPTORS (SADAK3B-V1, OUT-OF-REGISTER REMARK 900 FUSION) DBREF 2WQ1 A 1 33 UNP P03069 GCN4_YEAST 249 281 SEQADV 2WQ1 ILE A 9 UNP P03069 VAL 257 ENGINEERED MUTATION SEQADV 2WQ1 ASN A 12 UNP P03069 LEU 260 ENGINEERED MUTATION SEQADV 2WQ1 THR A 13 UNP P03069 LEU 261 ENGINEERED MUTATION SEQADV 2WQ1 ILE A 16 UNP P03069 ASN 264 ENGINEERED MUTATION SEQADV 2WQ1 ASN A 19 UNP P03069 LEU 267 ENGINEERED MUTATION SEQADV 2WQ1 THR A 20 UNP P03069 GLU 268 ENGINEERED MUTATION SEQADV 2WQ1 ILE A 23 UNP P03069 VAL 271 ENGINEERED MUTATION SEQADV 2WQ1 ASN A 26 UNP P03069 LEU 274 ENGINEERED MUTATION SEQADV 2WQ1 THR A 27 UNP P03069 LYS 275 ENGINEERED MUTATION SEQRES 1 A 33 ARG MET LYS GLN LEU GLU ASP LYS ILE GLU GLU ASN THR SEQRES 2 A 33 SER LYS ILE TYR HIS ASN THR ASN GLU ILE ALA ARG ASN SEQRES 3 A 33 THR LYS LEU VAL GLY GLU ARG HET BR A1033 1 HET BR A1034 1 HET BR A1035 1 HETNAM BR BROMIDE ION FORMUL 2 BR 3(BR 1-) FORMUL 3 HOH *70(H2 O1) HELIX 1 1 ARG A 1 VAL A 30 1 30 SITE 1 AC1 1 ASN A 12 SITE 1 AC2 1 ASN A 19 SITE 1 AC3 1 ASN A 26 CRYST1 56.580 56.580 56.580 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017674 0.00000