HEADER FLUORESCENT PROTEIN 08-SEP-09 2WSN TITLE STRUCTURE OF ENHANCED CYAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-238; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CHROMOPHORE RESULTING FROM AUTOCATALYTIC CYCLIZATION COMPND 7 OF CONSECUTIVE AMINO ACID RESIDUES THR65, TRP66 AND GLY67. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 CODONPLUS(DE3) RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PQE60 KEYWDS FLUORESCENT PROTEIN, CHROMOPHORE, LUMINESCENCE, PHOTOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.LELIMOUSIN,M.NOIRCLERC-SAVOYE,C.LAZARENO-SAEZ,B.PAETZOLD,S.LE VOT, AUTHOR 2 R.CHAZAL,P.MACHEBOEUF,M.J.FIELD,D.BOURGEOIS,A.ROYANT REVDAT 6 16-OCT-24 2WSN 1 REMARK REVDAT 5 20-DEC-23 2WSN 1 REMARK REVDAT 4 23-OCT-19 2WSN 1 SEQADV LINK REVDAT 3 21-APR-10 2WSN 1 REMARK HETNAM FORMUL REVDAT 2 02-FEB-10 2WSN 1 JRNL REMARK REVDAT 1 29-SEP-09 2WSN 0 JRNL AUTH M.LELIMOUSIN,M.NOIRCLERC-SAVOYE,C.LAZARENO-SAEZ,B.PAETZOLD, JRNL AUTH 2 S.LE VOT,R.CHAZAL,P.MACHEBOEUF,M.J.FIELD,D.BOURGEOIS, JRNL AUTH 3 A.ROYANT JRNL TITL INTRINSIC DYNAMICS IN ECFP AND CERULEAN CONTROL FLUORESCENCE JRNL TITL 2 QUANTUM YIELD. JRNL REF BIOCHEMISTRY V. 48 10038 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19754158 JRNL DOI 10.1021/BI901093W REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.H.BAE,M.RUBINI,G.JUNG,G.WIEGAND,M.H.J.SEIFERT,M.K.AZIM, REMARK 1 AUTH 2 J.S.KIM,A.ZUMBUSCH,T.A.HOLAK,L.MORODER,R.HUBER,N.BUDISA REMARK 1 TITL EXPANSION OF THE GENETIC CODE ENABLES DESIGN OF A NOVEL REMARK 1 TITL 2 "GOLD" CLASS OF GREEN FLUORESCENT PROTEINS. REMARK 1 REF J.MOL.BIOL. V. 328 1071 2003 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12729742 REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 43679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2317 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.37 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2306 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1776 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.060 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.976 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2019 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1341 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2780 ; 1.853 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3313 ; 0.959 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 274 ; 6.785 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;36.423 ;25.408 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 350 ;12.151 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 6.891 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2313 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 401 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1211 ; 1.872 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 490 ; 0.678 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1992 ; 2.706 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 808 ; 4.196 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 768 ; 5.844 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3360 ; 1.684 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 2WSN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1290040974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45997 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1OXE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19.5% PEG8000, 4% GLYCEROL, 1M HEPES REMARK 280 PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.59100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.29650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.36000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.29650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.59100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.36000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 231 REMARK 465 GLY A 232 REMARK 465 MET A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 GLU A 132 CD OE1 OE2 REMARK 470 ASP A 133 CG OD1 OD2 REMARK 470 GLN A 157 CG CD OE1 NE2 REMARK 470 THR A 230 CA C O CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 19 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 144 -71.92 -159.12 REMARK 500 ILE A 229 -50.32 -121.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2EMN RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1JC0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE ANALYSIS OF A REDOX- SENSITIVE GREENFLUORESCENT REMARK 900 PROTEIN VARIANT IN A REDUCED FORM REMARK 900 RELATED ID: 1RM9 RELATED DB: PDB REMARK 900 PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA REMARK 900 GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE REMARK 900 RELATED ID: 2FZU RELATED DB: PDB REMARK 900 REDUCED ENOLATE CHROMOPHORE INTERMEDIATE FOR GFP VARIANT REMARK 900 RELATED ID: 1EMA RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA REMARK 900 RELATED ID: 1RMO RELATED DB: PDB REMARK 900 PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA REMARK 900 GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE REMARK 900 RELATED ID: 1F09 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP- REMARK 900 H148Q WITH TWO BOUND IODIDES REMARK 900 RELATED ID: 1YHG RELATED DB: PDB REMARK 900 UNCYCLIZED PRECURSOR STRUCTURE OF S65G Y66S V68G GFP VARIANT REMARK 900 RELATED ID: 1KP5 RELATED DB: PDB REMARK 900 CYCLIC GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1Q73 RELATED DB: PDB REMARK 900 S65T Q80R Y145C T203C GREEN FLUORESCENT PROTEIN (GFP) PH 8.5 REMARK 900 RELATED ID: 2B3Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A WELL-FOLDED VARIANT OF GREENFLUORESCENT REMARK 900 PROTEIN REMARK 900 RELATED ID: 1Z1P RELATED DB: PDB REMARK 900 Y66L VARIANT OF ENHANCED GREEN FLUORESCENT PROTEIN WITH 412-NM REMARK 900 ABSORBING CHROMOPHORE REMARK 900 RELATED ID: 1RMM RELATED DB: PDB REMARK 900 PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA REMARK 900 GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE REMARK 900 RELATED ID: 1YHH RELATED DB: PDB REMARK 900 UNCYCLIZED PRECURSOR STRUCTURE OF S65A Y66S G67A GFP VARIANT REMARK 900 RELATED ID: 2B3P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A SUPERFOLDER GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1EMM RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 2FWQ RELATED DB: PDB REMARK 900 REDUCED ENOLATE CHROMOPHORE INTERMEDIATE FOR Y66H GFPVARIANT REMARK 900 RELATED ID: 1EMG RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN (65-67 REPLACED BY CRO, S65TSUBSTITUTION, REMARK 900 Q80R) REMARK 900 RELATED ID: 1RMP RELATED DB: PDB REMARK 900 PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA REMARK 900 GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE REMARK 900 RELATED ID: 1EMB RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREAVICTORIA, GLN 80 REMARK 900 REPLACED WITH ARG REMARK 900 RELATED ID: 2EMD RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1Q4E RELATED DB: PDB REMARK 900 S65T Q80R Y145C GREEN FLUORESCENT PROTEIN ( GFP) PH 8.5 REMARK 900 RELATED ID: 1Q4D RELATED DB: PDB REMARK 900 S65T Q80R T203C GREEN FLUORESCENT PROTEIN ( GFP) PH 5.5 REMARK 900 RELATED ID: 1KYS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A ZN-BOUND GREEN FLUORESCENT PROTEINBIOSENSOR REMARK 900 RELATED ID: 1C4F RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN S65T AT PH 4.6 REMARK 900 RELATED ID: 1Q4A RELATED DB: PDB REMARK 900 S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 8.5 REMARK 900 RELATED ID: 1H6R RELATED DB: PDB REMARK 900 A REDOX SENSITIVE VARIANT OF GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1EML RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1W7T RELATED DB: PDB REMARK 900 PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT REMARK 900 PROTEIN AT 100 K REMARK 900 RELATED ID: 1EMK RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 2EMO RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1Q4B RELATED DB: PDB REMARK 900 S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 5.5 REMARK 900 RELATED ID: 1W7U RELATED DB: PDB REMARK 900 PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT REMARK 900 PROTEIN AFTER STRUCTURAL ANNEALING AT 170K REMARK 900 RELATED ID: 1YJF RELATED DB: PDB REMARK 900 CYCLIZED POST-TRANSLATIONAL PRODUCT FOR S65A Y66S (GFPHAL)GREEN REMARK 900 FLUORESCENT PROTEIN VARIANT REMARK 900 RELATED ID: 1Q4C RELATED DB: PDB REMARK 900 S65T Q80R T203C GREEN FLUORESCENT PROTEIN ( GFP) PH 8.5 REMARK 900 RELATED ID: 1YFP RELATED DB: PDB REMARK 900 STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP REMARK 900 RELATED ID: 1EMF RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 2AH8 RELATED DB: PDB REMARK 900 ROGFP1-R7. CYSTAL STRUCTURE ANALYSIS OF A RATE-ENHANCEDVARIANT OF REMARK 900 REDOX-SENSITIVE GREEN FLUORESCENT PROTEIN INTHE OXIDIZED FORM. REMARK 900 RELATED ID: 1YJ2 RELATED DB: PDB REMARK 900 CYCLIZED, NON-DEHYDRATED POST-TRANSLATIONAL PRODUCT FORS65A Y66S REMARK 900 H148G GFP VARIANT REMARK 900 RELATED ID: 1YHI RELATED DB: PDB REMARK 900 UNCYCLIZED PRECURSOR STRUCTURE OF S65A Y66S R96A GFP VARIANT REMARK 900 RELATED ID: 1EME RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1CV7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ENHANCED CYAN-EMISSION VARIANT OF GFP REMARK 900 RELATED ID: 1GFL RELATED DB: PDB REMARK 900 STRUCTURE OF GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1QYQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CYCLIZED S65G Y66G GFP VARIANT REMARK 900 RELATED ID: 1JBZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE ANALYSIS OF A DUAL- WAVELENGTH EMISSIONGREEN REMARK 900 FLUORESCENT PROTEIN VARIANT AT HIGH PH REMARK 900 RELATED ID: 1KYR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CU-BOUND GREEN FLUORESCENT PROTEINZN REMARK 900 BIOSENSOR REMARK 900 RELATED ID: 2AHA RELATED DB: PDB REMARK 900 ROGFP1-R8. CYSTAL STRUCTURE ANALYSIS OF A RATE-ENHANCEDVARIANT OF REMARK 900 REDOX-SENSITIVE GREEN FLUORESCENT PROTEIN INTHE REDUCED FORM. REMARK 900 RELATED ID: 1RRX RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC EVIDENCE FOR ISOMERIC CHROMOPHORES IN 3- REMARK 900 FLUOROTYROSYL-GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1QXT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PRECYCLIZED INTERMEDIATE FOR THE REMARK 900 GREENFLUORESCENT PROTEIN R96A VARIANT (A) REMARK 900 RELATED ID: 1MYW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A YELLOW FLUORESCENT PROTEIN WITHIMPROVED REMARK 900 MATURATION AND REDUCED ENVIRONMENTAL SENSITIVITY REMARK 900 RELATED ID: 2YFP RELATED DB: PDB REMARK 900 STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP REMARK 900 RELATED ID: 1QY3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PRECYCLIZED INTERMEDIATE FOR THE REMARK 900 GREENFLUORESCENT PROTEIN R96A VARIANT (B) REMARK 900 RELATED ID: 1B9C RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN MUTANT F99S, M153T AND V163A REMARK 900 RELATED ID: 1W7S RELATED DB: PDB REMARK 900 WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1JBY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE ANALYSIS OF A DUAL- WAVELENGTH EMISSIONGREEN REMARK 900 FLUORESCENT PROTEIN VARIANT AT LOW PH REMARK 900 RELATED ID: 1F0B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP- REMARK 900 H148Q REMARK 900 RELATED ID: 1JC1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE ANALYSIS OF A REDOX- SENSITIVE GREENFLUORESCENT REMARK 900 PROTEIN VARIANT IN A OXIDIZED FORM REMARK 900 RELATED ID: 1QYO RELATED DB: PDB REMARK 900 ANAEROBIC PRECYLIZATION INTERMEDIATE CRYSTAL STRUCTURE FORS65G Y66G REMARK 900 GFP VARIANT REMARK 900 RELATED ID: 1BFP RELATED DB: PDB REMARK 900 BLUE VARIANT OF GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1HUY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OFGREEN REMARK 900 FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1HCJ RELATED DB: PDB REMARK 900 PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT REMARK 900 PROTEIN REMARK 900 RELATED ID: 1EMC RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1KYP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF AN APO GREEN FLUORESCENT PROTEIN ZNBIOSENSOR REMARK 900 RELATED ID: 1Z1Q RELATED DB: PDB REMARK 900 Y66L VARIANT OF ENHANCED GREEN FLUORESCENT PROTEIN WITH 374-NM REMARK 900 ABSORBING CHROMOPHORE REMARK 900 RELATED ID: 1QYF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MATURED GREEN FLUORESCENT PROTEIN R96AVARIANT REMARK 900 RELATED ID: 2WSO RELATED DB: PDB REMARK 900 STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH REMARK 999 REMARK 999 SEQUENCE REMARK 999 GFP VARIANT DBREF 2WSN A 0 1 PDB 2WSN 2WSN 0 1 DBREF 2WSN A 2 238 UNP P42212 GFP_AEQVI 2 238 SEQADV 2WSN LEU A 64 UNP P42212 PHE 64 CONFLICT SEQADV 2WSN CRF A 66 UNP P42212 THR 65 CHROMOPHORE SEQADV 2WSN CRF A 66 UNP P42212 TRP 66 CHROMOPHORE SEQADV 2WSN CRF A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 2WSN ILE A 146 UNP P42212 ASN 146 CONFLICT SEQADV 2WSN THR A 153 UNP P42212 MET 153 CONFLICT SEQADV 2WSN LEU A 231 UNP P42212 HIS 231 CONFLICT SEQRES 1 A 237 MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL SEQRES 2 A 237 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 3 A 237 LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SEQRES 4 A 237 TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY SEQRES 5 A 237 LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 6 A 237 CRF VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS SEQRES 7 A 237 GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 8 A 237 VAL GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN SEQRES 9 A 237 TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR SEQRES 10 A 237 LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS SEQRES 11 A 237 GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN SEQRES 12 A 237 TYR ILE SER HIS ASN VAL TYR ILE THR ALA ASP LYS GLN SEQRES 13 A 237 LYS ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN SEQRES 14 A 237 ILE GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN SEQRES 15 A 237 GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO SEQRES 16 A 237 ASP ASN HIS TYR LEU SER THR GLN SER ALA LEU SER LYS SEQRES 17 A 237 ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU SEQRES 18 A 237 PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET ASP GLU SEQRES 19 A 237 LEU TYR LYS MODRES 2WSN CRF A 66 THR MODRES 2WSN CRF A 66 TRP MODRES 2WSN CRF A 66 GLY HET CRF A 66 24 HETNAM CRF [(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL- HETNAM 2 CRF 3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRF YL]ACETIC ACID FORMUL 1 CRF C17 H18 N4 O4 FORMUL 2 HOH *224(H2 O) HELIX 1 1 GLY A 4 THR A 9 5 6 HELIX 2 2 ALA A 37 TYR A 39 5 3 HELIX 3 3 PRO A 56 VAL A 61 5 6 HELIX 4 4 VAL A 68 SER A 72 5 5 HELIX 5 5 PRO A 75 HIS A 81 5 7 HELIX 6 6 ASP A 82 ALA A 87 1 6 HELIX 7 7 LYS A 156 ASN A 159 5 4 SHEET 1 A12 VAL A 12 VAL A 22 0 SHEET 2 A12 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 A12 LYS A 41 CYS A 48 -1 O ILE A 47 N SER A 30 SHEET 4 A12 HIS A 217 ALA A 227 -1 O GLU A 222 N LEU A 42 SHEET 5 A12 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 A12 ILE A 146 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 A12 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 A12 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 A12 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 A12 ASN A 105 GLU A 115 -1 O VAL A 112 N TYR A 92 SHEET 11 A12 THR A 118 ILE A 128 -1 O THR A 118 N GLU A 115 SHEET 12 A12 VAL A 12 VAL A 22 1 N ASP A 21 O GLY A 127 LINK C LEU A 64 N1 CRF A 66 1555 1555 1.35 LINK C3 CRF A 66 N VAL A 68 1555 1555 1.32 CISPEP 1 MET A 88 PRO A 89 0 6.62 CRYST1 51.182 62.720 70.593 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014166 0.00000