HEADER TRANSPORT PROTEIN 10-SEP-09 2WSX TITLE CRYSTAL STRUCTURE OF CARNITINE TRANSPORTER FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-CARNITINE/GAMMA-BUTYROBETAINE ANTIPORTER; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: L-CARNITINE-G-BUTYROBETAINE ANTIPORTER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHULZE,A.C.TERWISSCHA VAN SCHELTINGA,W.KUEHLBRANDT REVDAT 2 11-MAY-11 2WSX 1 JRNL REVDAT 1 08-SEP-10 2WSX 0 JRNL AUTH S.SCHULZE,S.KOSTER,U.GELDMACHER, JRNL AUTH 2 A.C.TERWISSCHA VAN SCHELTINGA,W.KUHLBRANDT JRNL TITL STRUCTURAL BASIS OF NA(+)-INDEPENDENT AND JRNL TITL 2 COOPERATIVE SUBSTRATE/PRODUCT ANTIPORT IN CAIT. JRNL REF NATURE V. 467 233 2010 JRNL REFN ISSN 0028-0836 JRNL PMID 20829798 JRNL DOI 10.1038/NATURE09310 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.500 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.676 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.01 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.76 REMARK 3 NUMBER OF REFLECTIONS : 66982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.2390 REMARK 3 R VALUE (WORKING SET) : 0.2373 REMARK 3 FREE R VALUE : 0.2711 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 3357 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.6766 - 9.8841 0.95 2520 138 0.2500 0.2470 REMARK 3 2 9.8841 - 7.9309 1.00 2690 112 0.1565 0.1804 REMARK 3 3 7.9309 - 6.9540 1.00 2656 124 0.1893 0.2166 REMARK 3 4 6.9540 - 6.3300 1.00 2664 150 0.2155 0.2858 REMARK 3 5 6.3300 - 5.8829 1.00 2636 150 0.2338 0.3065 REMARK 3 6 5.8829 - 5.5402 1.00 2688 150 0.2398 0.3283 REMARK 3 7 5.5402 - 5.2655 1.00 2628 138 0.2568 0.3121 REMARK 3 8 5.2655 - 5.0383 1.00 2626 144 0.2326 0.2399 REMARK 3 9 5.0383 - 4.8459 1.00 2622 180 0.2255 0.2568 REMARK 3 10 4.8459 - 4.6798 1.00 2726 134 0.2176 0.2706 REMARK 3 11 4.6798 - 4.5344 1.00 2620 130 0.2228 0.2516 REMARK 3 12 4.5344 - 4.4056 1.00 2618 152 0.2438 0.2953 REMARK 3 13 4.4056 - 4.2902 1.00 2668 144 0.2414 0.3082 REMARK 3 14 4.2902 - 4.1860 1.00 2638 158 0.2480 0.2893 REMARK 3 15 4.1860 - 4.0913 1.00 2710 124 0.2447 0.2501 REMARK 3 16 4.0913 - 4.0046 1.00 2586 122 0.2625 0.3076 REMARK 3 17 4.0046 - 3.9248 1.00 2714 130 0.2753 0.3446 REMARK 3 18 3.9248 - 3.8510 1.00 2615 170 0.2837 0.2647 REMARK 3 19 3.8510 - 3.7825 1.00 2606 144 0.2861 0.3058 REMARK 3 20 3.7825 - 3.7186 1.00 2782 126 0.2933 0.2951 REMARK 3 21 3.7186 - 3.6588 1.00 2596 104 0.3011 0.3550 REMARK 3 22 3.6588 - 3.6027 1.00 2674 125 0.3072 0.3464 REMARK 3 23 3.6027 - 3.5499 1.00 2662 162 0.3300 0.3523 REMARK 3 24 3.5499 - 3.5000 1.00 2680 146 0.3365 0.3273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.286 REMARK 3 B_SOL : 99 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.12 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 147.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.2300 REMARK 3 B22 (A**2) : 7.2300 REMARK 3 B33 (A**2) : -14.4600 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : 0.0000 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 12138 REMARK 3 ANGLE : 1.302 16608 REMARK 3 CHIRALITY : 0.077 1902 REMARK 3 PLANARITY : 0.006 1983 REMARK 3 DIHEDRAL : 18.124 4029 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND RESID 1504 REMARK 3 SELECTION : CHAIN B AND RESID 1504 REMARK 3 ATOM PAIRS NUMBER : 10 REMARK 3 RMSD : 0.038 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND RESID 1504 REMARK 3 SELECTION : CHAIN C AND RESID 1504 REMARK 3 ATOM PAIRS NUMBER : 10 REMARK 3 RMSD : 0.041 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND RESID 1505 REMARK 3 SELECTION : CHAIN B AND RESID 1505 REMARK 3 ATOM PAIRS NUMBER : 10 REMARK 3 RMSD : 0.023 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND RESID 1504 REMARK 3 SELECTION : CHAIN C AND RESID 1505 REMARK 3 ATOM PAIRS NUMBER : 10 REMARK 3 RMSD : 0.017 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 3901 REMARK 3 RMSD : 0.053 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 3901 REMARK 3 RMSD : 0.050 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WSX COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-09. REMARK 100 THE PDBE ID CODE IS EBI-41112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71232 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.50 REMARK 200 RESOLUTION RANGE LOW (A) : 24.70 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.3 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 1.9 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.90 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.08667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.54333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 ARG A 6 REMARK 465 LYS A 7 REMARK 465 ASP A 504 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 ASN B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 LYS B 7 REMARK 465 ASP B 504 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 ASN C 3 REMARK 465 GLU C 4 REMARK 465 LYS C 5 REMARK 465 ARG C 6 REMARK 465 LYS C 7 REMARK 465 ASP C 504 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 ILE A 257 CG1 CG2 CD1 REMARK 470 VAL A 261 CG1 CG2 REMARK 470 ILE A 338 CG1 CG2 CD1 REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 ARG A 436 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 ILE B 257 CG1 CG2 CD1 REMARK 470 VAL B 261 CG1 CG2 REMARK 470 ILE B 338 CG1 CG2 CD1 REMARK 470 GLU B 386 CG CD OE1 OE2 REMARK 470 ARG B 436 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 82 CG CD OE1 OE2 REMARK 470 LYS C 182 CG CD CE NZ REMARK 470 ILE C 257 CG1 CG2 CD1 REMARK 470 VAL C 261 CG1 CG2 REMARK 470 ILE C 338 CG1 CG2 CD1 REMARK 470 GLU C 386 CG CD OE1 OE2 REMARK 470 ARG C 436 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 204 OG SER A 207 2.17 REMARK 500 O MET B 204 OG SER B 207 2.19 REMARK 500 O MET C 204 OG SER C 207 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 18 -74.13 -49.72 REMARK 500 MET A 62 -33.16 -35.93 REMARK 500 GLU A 82 157.43 -42.55 REMARK 500 TRP A 91 -71.00 -37.03 REMARK 500 ASN A 126 12.71 58.96 REMARK 500 THR A 128 -38.95 -32.26 REMARK 500 LYS A 165 44.26 25.68 REMARK 500 ILE A 282 -44.50 -28.49 REMARK 500 LYS A 309 40.03 36.28 REMARK 500 TYR A 320 -81.16 -56.21 REMARK 500 TRP A 321 -50.70 -20.55 REMARK 500 ILE A 326 -71.27 -68.67 REMARK 500 TYR A 327 -8.72 -53.15 REMARK 500 LEU A 362 -76.68 -46.51 REMARK 500 ARG A 449 -72.46 -58.81 REMARK 500 TRP A 502 -70.91 -61.48 REMARK 500 PRO B 18 -73.69 -49.69 REMARK 500 ILE B 40 -70.11 -30.46 REMARK 500 MET B 62 -35.11 -33.65 REMARK 500 GLU B 82 158.87 -40.52 REMARK 500 ASN B 126 13.58 58.71 REMARK 500 THR B 128 -40.22 -29.84 REMARK 500 LYS B 165 45.20 26.38 REMARK 500 SER B 173 -3.36 -57.79 REMARK 500 ILE B 225 108.86 -55.85 REMARK 500 HIS B 227 99.82 -67.11 REMARK 500 ILE B 282 -42.91 -29.40 REMARK 500 ILE B 307 -62.07 -93.52 REMARK 500 LYS B 309 42.44 33.17 REMARK 500 TYR B 327 -6.74 -54.47 REMARK 500 LEU B 362 -79.14 -47.07 REMARK 500 PHE B 416 -74.76 -62.24 REMARK 500 ARG B 449 -71.71 -60.19 REMARK 500 TRP B 502 -70.18 -61.19 REMARK 500 PRO C 18 -72.78 -49.34 REMARK 500 ILE C 40 -70.32 -32.03 REMARK 500 MET C 62 -32.30 -36.17 REMARK 500 GLU C 82 157.79 -40.56 REMARK 500 ASN C 126 12.79 59.06 REMARK 500 LYS C 165 43.25 28.54 REMARK 500 SER C 173 -3.64 -59.55 REMARK 500 ILE C 225 109.40 -57.59 REMARK 500 ASP C 305 58.44 38.87 REMARK 500 LYS C 309 41.39 35.16 REMARK 500 TYR C 327 -8.16 -56.27 REMARK 500 ILE C 338 -7.93 -59.17 REMARK 500 LEU C 362 -78.47 -46.16 REMARK 500 TRP C 363 -19.23 -48.73 REMARK 500 ASN C 369 -71.78 -59.51 REMARK 500 PHE C 416 -72.33 -62.59 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 A1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 A1505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 B1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 B1505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 C1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NM2 C1505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WSW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CARNITINE TRANSPORTER REMARK 900 FROM PROTEUS MIRABILIS DBREF 2WSX A 1 504 UNP P31553 CAIT_ECOLI 1 504 DBREF 2WSX B 1 504 UNP P31553 CAIT_ECOLI 1 504 DBREF 2WSX C 1 504 UNP P31553 CAIT_ECOLI 1 504 SEQADV 2WSX GLU A 81 UNP P31553 ASN 81 CONFLICT SEQADV 2WSX ALA A 254 UNP P31553 GLY 254 CONFLICT SEQADV 2WSX LEU A 379 UNP P31553 ILE 379 CONFLICT SEQADV 2WSX ASP A 443 UNP P31553 GLU 443 CONFLICT SEQADV 2WSX GLU B 81 UNP P31553 ASN 81 CONFLICT SEQADV 2WSX ALA B 254 UNP P31553 GLY 254 CONFLICT SEQADV 2WSX LEU B 379 UNP P31553 ILE 379 CONFLICT SEQADV 2WSX ASP B 443 UNP P31553 GLU 443 CONFLICT SEQADV 2WSX GLU C 81 UNP P31553 ASN 81 CONFLICT SEQADV 2WSX ALA C 254 UNP P31553 GLY 254 CONFLICT SEQADV 2WSX LEU C 379 UNP P31553 ILE 379 CONFLICT SEQADV 2WSX ASP C 443 UNP P31553 GLU 443 CONFLICT SEQRES 1 A 504 MET LYS ASN GLU LYS ARG LYS THR GLY ILE GLU PRO LYS SEQRES 2 A 504 VAL PHE PHE PRO PRO LEU ILE ILE VAL GLY ILE LEU CYS SEQRES 3 A 504 TRP LEU THR VAL ARG ASP LEU ASP ALA ALA ASN VAL VAL SEQRES 4 A 504 ILE ASN ALA VAL PHE SER TYR VAL THR ASN VAL TRP GLY SEQRES 5 A 504 TRP ALA PHE GLU TRP TYR MET VAL VAL MET LEU PHE GLY SEQRES 6 A 504 TRP PHE TRP LEU VAL PHE GLY PRO TYR ALA LYS LYS ARG SEQRES 7 A 504 LEU GLY GLU GLU PRO PRO GLU PHE SER THR ALA SER TRP SEQRES 8 A 504 ILE PHE MET MET PHE ALA SER CYS THR SER ALA ALA VAL SEQRES 9 A 504 LEU PHE TRP GLY SER ILE GLU ILE TYR TYR TYR ILE SER SEQRES 10 A 504 THR PRO PRO PHE GLY LEU GLU PRO ASN SER THR GLY ALA SEQRES 11 A 504 LYS GLU LEU GLY LEU ALA TYR SER LEU PHE HIS TRP GLY SEQRES 12 A 504 PRO LEU PRO TRP ALA THR TYR SER PHE LEU SER VAL ALA SEQRES 13 A 504 PHE ALA TYR PHE PHE PHE VAL ARG LYS MET GLU VAL ILE SEQRES 14 A 504 ARG PRO SER SER THR LEU VAL PRO LEU VAL GLY GLU LYS SEQRES 15 A 504 HIS ALA LYS GLY LEU PHE GLY THR ILE VAL ASP ASN PHE SEQRES 16 A 504 TYR LEU VAL ALA LEU ILE PHE ALA MET GLY THR SER LEU SEQRES 17 A 504 GLY LEU ALA THR PRO LEU VAL THR GLU CYS MET GLN TRP SEQRES 18 A 504 LEU PHE GLY ILE PRO HIS THR LEU GLN LEU ASP ALA ILE SEQRES 19 A 504 ILE ILE THR CYS TRP ILE ILE LEU ASN ALA ILE CYS VAL SEQRES 20 A 504 ALA CYS GLY LEU GLN LYS ALA VAL ARG ILE ALA SER ASP SEQRES 21 A 504 VAL ARG SER TYR LEU SER PHE LEU MET LEU GLY TRP VAL SEQRES 22 A 504 PHE ILE VAL SER GLY ALA SER PHE ILE MET ASN TYR PHE SEQRES 23 A 504 THR ASP SER VAL GLY MET LEU LEU MET TYR LEU PRO ARG SEQRES 24 A 504 MET LEU PHE TYR THR ASP PRO ILE ALA LYS GLY GLY PHE SEQRES 25 A 504 PRO GLN GLY TRP THR VAL PHE TYR TRP ALA TRP TRP VAL SEQRES 26 A 504 ILE TYR ALA ILE GLN MET SER ILE PHE LEU ALA ARG ILE SEQRES 27 A 504 SER ARG GLY ARG THR VAL ARG GLU LEU CYS PHE GLY MET SEQRES 28 A 504 VAL LEU GLY LEU THR ALA SER THR TRP ILE LEU TRP THR SEQRES 29 A 504 VAL LEU GLY SER ASN THR LEU LEU LEU ILE ASP LYS ASN SEQRES 30 A 504 ILE LEU ASN ILE PRO ASN LEU ILE GLU GLN TYR GLY VAL SEQRES 31 A 504 ALA ARG ALA ILE ILE GLU THR TRP ALA ALA LEU PRO LEU SEQRES 32 A 504 SER THR ALA THR MET TRP GLY PHE PHE ILE LEU CYS PHE SEQRES 33 A 504 ILE ALA THR VAL THR LEU VAL ASN ALA CYS SER TYR THR SEQRES 34 A 504 LEU ALA MET SER THR CYS ARG GLU VAL ARG ASP GLY GLU SEQRES 35 A 504 ASP PRO PRO LEU LEU VAL ARG ILE GLY TRP SER ILE LEU SEQRES 36 A 504 VAL GLY ILE ILE GLY ILE VAL LEU LEU ALA LEU GLY GLY SEQRES 37 A 504 LEU LYS PRO ILE GLN THR ALA ILE ILE ALA GLY GLY CYS SEQRES 38 A 504 PRO LEU PHE PHE VAL ASN ILE MET VAL THR LEU SER PHE SEQRES 39 A 504 ILE LYS ASP ALA LYS GLN ASN TRP LYS ASP SEQRES 1 B 504 MET LYS ASN GLU LYS ARG LYS THR GLY ILE GLU PRO LYS SEQRES 2 B 504 VAL PHE PHE PRO PRO LEU ILE ILE VAL GLY ILE LEU CYS SEQRES 3 B 504 TRP LEU THR VAL ARG ASP LEU ASP ALA ALA ASN VAL VAL SEQRES 4 B 504 ILE ASN ALA VAL PHE SER TYR VAL THR ASN VAL TRP GLY SEQRES 5 B 504 TRP ALA PHE GLU TRP TYR MET VAL VAL MET LEU PHE GLY SEQRES 6 B 504 TRP PHE TRP LEU VAL PHE GLY PRO TYR ALA LYS LYS ARG SEQRES 7 B 504 LEU GLY GLU GLU PRO PRO GLU PHE SER THR ALA SER TRP SEQRES 8 B 504 ILE PHE MET MET PHE ALA SER CYS THR SER ALA ALA VAL SEQRES 9 B 504 LEU PHE TRP GLY SER ILE GLU ILE TYR TYR TYR ILE SER SEQRES 10 B 504 THR PRO PRO PHE GLY LEU GLU PRO ASN SER THR GLY ALA SEQRES 11 B 504 LYS GLU LEU GLY LEU ALA TYR SER LEU PHE HIS TRP GLY SEQRES 12 B 504 PRO LEU PRO TRP ALA THR TYR SER PHE LEU SER VAL ALA SEQRES 13 B 504 PHE ALA TYR PHE PHE PHE VAL ARG LYS MET GLU VAL ILE SEQRES 14 B 504 ARG PRO SER SER THR LEU VAL PRO LEU VAL GLY GLU LYS SEQRES 15 B 504 HIS ALA LYS GLY LEU PHE GLY THR ILE VAL ASP ASN PHE SEQRES 16 B 504 TYR LEU VAL ALA LEU ILE PHE ALA MET GLY THR SER LEU SEQRES 17 B 504 GLY LEU ALA THR PRO LEU VAL THR GLU CYS MET GLN TRP SEQRES 18 B 504 LEU PHE GLY ILE PRO HIS THR LEU GLN LEU ASP ALA ILE SEQRES 19 B 504 ILE ILE THR CYS TRP ILE ILE LEU ASN ALA ILE CYS VAL SEQRES 20 B 504 ALA CYS GLY LEU GLN LYS ALA VAL ARG ILE ALA SER ASP SEQRES 21 B 504 VAL ARG SER TYR LEU SER PHE LEU MET LEU GLY TRP VAL SEQRES 22 B 504 PHE ILE VAL SER GLY ALA SER PHE ILE MET ASN TYR PHE SEQRES 23 B 504 THR ASP SER VAL GLY MET LEU LEU MET TYR LEU PRO ARG SEQRES 24 B 504 MET LEU PHE TYR THR ASP PRO ILE ALA LYS GLY GLY PHE SEQRES 25 B 504 PRO GLN GLY TRP THR VAL PHE TYR TRP ALA TRP TRP VAL SEQRES 26 B 504 ILE TYR ALA ILE GLN MET SER ILE PHE LEU ALA ARG ILE SEQRES 27 B 504 SER ARG GLY ARG THR VAL ARG GLU LEU CYS PHE GLY MET SEQRES 28 B 504 VAL LEU GLY LEU THR ALA SER THR TRP ILE LEU TRP THR SEQRES 29 B 504 VAL LEU GLY SER ASN THR LEU LEU LEU ILE ASP LYS ASN SEQRES 30 B 504 ILE LEU ASN ILE PRO ASN LEU ILE GLU GLN TYR GLY VAL SEQRES 31 B 504 ALA ARG ALA ILE ILE GLU THR TRP ALA ALA LEU PRO LEU SEQRES 32 B 504 SER THR ALA THR MET TRP GLY PHE PHE ILE LEU CYS PHE SEQRES 33 B 504 ILE ALA THR VAL THR LEU VAL ASN ALA CYS SER TYR THR SEQRES 34 B 504 LEU ALA MET SER THR CYS ARG GLU VAL ARG ASP GLY GLU SEQRES 35 B 504 ASP PRO PRO LEU LEU VAL ARG ILE GLY TRP SER ILE LEU SEQRES 36 B 504 VAL GLY ILE ILE GLY ILE VAL LEU LEU ALA LEU GLY GLY SEQRES 37 B 504 LEU LYS PRO ILE GLN THR ALA ILE ILE ALA GLY GLY CYS SEQRES 38 B 504 PRO LEU PHE PHE VAL ASN ILE MET VAL THR LEU SER PHE SEQRES 39 B 504 ILE LYS ASP ALA LYS GLN ASN TRP LYS ASP SEQRES 1 C 504 MET LYS ASN GLU LYS ARG LYS THR GLY ILE GLU PRO LYS SEQRES 2 C 504 VAL PHE PHE PRO PRO LEU ILE ILE VAL GLY ILE LEU CYS SEQRES 3 C 504 TRP LEU THR VAL ARG ASP LEU ASP ALA ALA ASN VAL VAL SEQRES 4 C 504 ILE ASN ALA VAL PHE SER TYR VAL THR ASN VAL TRP GLY SEQRES 5 C 504 TRP ALA PHE GLU TRP TYR MET VAL VAL MET LEU PHE GLY SEQRES 6 C 504 TRP PHE TRP LEU VAL PHE GLY PRO TYR ALA LYS LYS ARG SEQRES 7 C 504 LEU GLY GLU GLU PRO PRO GLU PHE SER THR ALA SER TRP SEQRES 8 C 504 ILE PHE MET MET PHE ALA SER CYS THR SER ALA ALA VAL SEQRES 9 C 504 LEU PHE TRP GLY SER ILE GLU ILE TYR TYR TYR ILE SER SEQRES 10 C 504 THR PRO PRO PHE GLY LEU GLU PRO ASN SER THR GLY ALA SEQRES 11 C 504 LYS GLU LEU GLY LEU ALA TYR SER LEU PHE HIS TRP GLY SEQRES 12 C 504 PRO LEU PRO TRP ALA THR TYR SER PHE LEU SER VAL ALA SEQRES 13 C 504 PHE ALA TYR PHE PHE PHE VAL ARG LYS MET GLU VAL ILE SEQRES 14 C 504 ARG PRO SER SER THR LEU VAL PRO LEU VAL GLY GLU LYS SEQRES 15 C 504 HIS ALA LYS GLY LEU PHE GLY THR ILE VAL ASP ASN PHE SEQRES 16 C 504 TYR LEU VAL ALA LEU ILE PHE ALA MET GLY THR SER LEU SEQRES 17 C 504 GLY LEU ALA THR PRO LEU VAL THR GLU CYS MET GLN TRP SEQRES 18 C 504 LEU PHE GLY ILE PRO HIS THR LEU GLN LEU ASP ALA ILE SEQRES 19 C 504 ILE ILE THR CYS TRP ILE ILE LEU ASN ALA ILE CYS VAL SEQRES 20 C 504 ALA CYS GLY LEU GLN LYS ALA VAL ARG ILE ALA SER ASP SEQRES 21 C 504 VAL ARG SER TYR LEU SER PHE LEU MET LEU GLY TRP VAL SEQRES 22 C 504 PHE ILE VAL SER GLY ALA SER PHE ILE MET ASN TYR PHE SEQRES 23 C 504 THR ASP SER VAL GLY MET LEU LEU MET TYR LEU PRO ARG SEQRES 24 C 504 MET LEU PHE TYR THR ASP PRO ILE ALA LYS GLY GLY PHE SEQRES 25 C 504 PRO GLN GLY TRP THR VAL PHE TYR TRP ALA TRP TRP VAL SEQRES 26 C 504 ILE TYR ALA ILE GLN MET SER ILE PHE LEU ALA ARG ILE SEQRES 27 C 504 SER ARG GLY ARG THR VAL ARG GLU LEU CYS PHE GLY MET SEQRES 28 C 504 VAL LEU GLY LEU THR ALA SER THR TRP ILE LEU TRP THR SEQRES 29 C 504 VAL LEU GLY SER ASN THR LEU LEU LEU ILE ASP LYS ASN SEQRES 30 C 504 ILE LEU ASN ILE PRO ASN LEU ILE GLU GLN TYR GLY VAL SEQRES 31 C 504 ALA ARG ALA ILE ILE GLU THR TRP ALA ALA LEU PRO LEU SEQRES 32 C 504 SER THR ALA THR MET TRP GLY PHE PHE ILE LEU CYS PHE SEQRES 33 C 504 ILE ALA THR VAL THR LEU VAL ASN ALA CYS SER TYR THR SEQRES 34 C 504 LEU ALA MET SER THR CYS ARG GLU VAL ARG ASP GLY GLU SEQRES 35 C 504 ASP PRO PRO LEU LEU VAL ARG ILE GLY TRP SER ILE LEU SEQRES 36 C 504 VAL GLY ILE ILE GLY ILE VAL LEU LEU ALA LEU GLY GLY SEQRES 37 C 504 LEU LYS PRO ILE GLN THR ALA ILE ILE ALA GLY GLY CYS SEQRES 38 C 504 PRO LEU PHE PHE VAL ASN ILE MET VAL THR LEU SER PHE SEQRES 39 C 504 ILE LYS ASP ALA LYS GLN ASN TRP LYS ASP HET NM2 A1504 10 HET NM2 A1505 10 HET NM2 B1504 10 HET NM2 B1505 10 HET NM2 C1504 10 HET NM2 C1505 10 HETNAM NM2 3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM FORMUL 4 NM2 6(C7 H16 N O2 1+) HELIX 1 1 PHE A 15 VAL A 22 1 8 HELIX 2 2 ILE A 24 ASP A 32 1 9 HELIX 3 3 ASP A 32 TRP A 51 1 20 HELIX 4 4 TRP A 53 PHE A 64 1 12 HELIX 5 5 TRP A 66 PHE A 71 1 6 HELIX 6 6 SER A 87 ALA A 97 1 11 HELIX 7 7 SER A 101 TRP A 107 1 7 HELIX 8 8 ILE A 110 THR A 118 1 9 HELIX 9 9 LEU A 135 TRP A 142 1 8 HELIX 10 10 TRP A 147 ARG A 164 1 18 HELIX 11 11 ARG A 170 LEU A 175 5 6 HELIX 12 12 THR A 190 MET A 204 1 15 HELIX 13 13 LEU A 210 PHE A 223 1 14 HELIX 14 14 THR A 228 CYS A 249 1 22 HELIX 15 15 LEU A 251 LEU A 270 1 20 HELIX 16 16 TRP A 272 SER A 277 1 6 HELIX 17 17 ALA A 279 VAL A 290 1 12 HELIX 18 18 MET A 292 PHE A 302 1 11 HELIX 19 19 TRP A 316 SER A 339 1 24 HELIX 20 20 THR A 343 PHE A 349 1 7 HELIX 21 21 LEU A 355 LEU A 366 1 12 HELIX 22 22 SER A 368 ASN A 377 1 10 HELIX 23 23 ASN A 380 TYR A 388 1 9 HELIX 24 24 VAL A 390 ALA A 400 1 11 HELIX 25 25 LEU A 403 TRP A 409 1 7 HELIX 26 26 PHE A 411 CYS A 435 1 25 HELIX 27 27 PRO A 445 ILE A 450 1 6 HELIX 28 28 ILE A 461 LEU A 466 1 6 HELIX 29 29 LEU A 469 ALA A 478 1 10 HELIX 30 30 CYS A 481 TRP A 502 1 22 HELIX 31 31 PHE B 15 VAL B 22 1 8 HELIX 32 32 ILE B 24 ASP B 32 1 9 HELIX 33 33 ASP B 32 TRP B 51 1 20 HELIX 34 34 TRP B 53 PHE B 64 1 12 HELIX 35 35 TRP B 66 PHE B 71 1 6 HELIX 36 36 SER B 87 ALA B 97 1 11 HELIX 37 37 SER B 101 TRP B 107 1 7 HELIX 38 38 ILE B 110 THR B 118 1 9 HELIX 39 39 LEU B 135 TRP B 142 1 8 HELIX 40 40 TRP B 147 ARG B 164 1 18 HELIX 41 41 ARG B 170 LEU B 175 5 6 HELIX 42 42 THR B 190 MET B 204 1 15 HELIX 43 43 LEU B 210 PHE B 223 1 14 HELIX 44 44 THR B 228 CYS B 249 1 22 HELIX 45 45 LEU B 251 LEU B 270 1 20 HELIX 46 46 TRP B 272 SER B 277 1 6 HELIX 47 47 ALA B 279 VAL B 290 1 12 HELIX 48 48 MET B 292 PHE B 302 1 11 HELIX 49 49 TRP B 316 SER B 339 1 24 HELIX 50 50 THR B 343 PHE B 349 1 7 HELIX 51 51 LEU B 355 LEU B 366 1 12 HELIX 52 52 SER B 368 ASP B 375 1 8 HELIX 53 53 ASN B 380 TYR B 388 1 9 HELIX 54 54 VAL B 390 ALA B 400 1 11 HELIX 55 55 LEU B 403 TRP B 409 1 7 HELIX 56 56 PHE B 411 CYS B 435 1 25 HELIX 57 57 PRO B 445 ILE B 450 1 6 HELIX 58 58 ILE B 461 LEU B 466 1 6 HELIX 59 59 LEU B 469 ALA B 478 1 10 HELIX 60 60 CYS B 481 ASN B 501 1 21 HELIX 61 61 PHE C 15 VAL C 22 1 8 HELIX 62 62 ILE C 24 ASP C 32 1 9 HELIX 63 63 ASP C 32 TRP C 51 1 20 HELIX 64 64 TRP C 53 PHE C 64 1 12 HELIX 65 65 TRP C 66 PHE C 71 1 6 HELIX 66 66 SER C 87 ALA C 97 1 11 HELIX 67 67 SER C 101 TRP C 107 1 7 HELIX 68 68 ILE C 110 THR C 118 1 9 HELIX 69 69 LEU C 135 TRP C 142 1 8 HELIX 70 70 TRP C 147 ARG C 164 1 18 HELIX 71 71 ARG C 170 LEU C 175 5 6 HELIX 72 72 THR C 190 MET C 204 1 15 HELIX 73 73 LEU C 210 PHE C 223 1 14 HELIX 74 74 THR C 228 CYS C 249 1 22 HELIX 75 75 LEU C 251 LEU C 270 1 20 HELIX 76 76 TRP C 272 SER C 277 1 6 HELIX 77 77 ALA C 279 VAL C 290 1 12 HELIX 78 78 MET C 292 PHE C 302 1 11 HELIX 79 79 TRP C 316 SER C 339 1 24 HELIX 80 80 THR C 343 PHE C 349 1 7 HELIX 81 81 LEU C 355 LEU C 366 1 12 HELIX 82 82 SER C 368 ASN C 377 1 10 HELIX 83 83 ASN C 380 TYR C 388 1 9 HELIX 84 84 VAL C 390 ALA C 400 1 11 HELIX 85 85 LEU C 403 TRP C 409 1 7 HELIX 86 86 PHE C 411 CYS C 435 1 25 HELIX 87 87 PRO C 445 ILE C 450 1 6 HELIX 88 88 ILE C 461 LEU C 466 1 6 HELIX 89 89 LEU C 469 ALA C 478 1 10 HELIX 90 90 CYS C 481 ASN C 501 1 21 SITE 1 AC1 4 TRP A 142 TRP A 323 TYR A 327 MET A 331 SITE 1 AC2 5 GLY A 311 PHE A 312 GLY A 315 LEU A 469 SITE 2 AC2 5 GLN A 473 SITE 1 AC3 4 TRP B 142 TRP B 323 TYR B 327 MET B 331 SITE 1 AC4 5 TYR B 114 GLY B 311 PHE B 312 GLY B 315 SITE 2 AC4 5 GLN B 473 SITE 1 AC5 4 TRP C 142 TRP C 323 TYR C 327 MET C 331 SITE 1 AC6 6 TYR C 114 GLY C 311 PHE C 312 GLY C 315 SITE 2 AC6 6 LEU C 469 GLN C 473 CRYST1 124.200 124.200 154.630 90.00 90.00 120.00 P 32 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008052 0.004649 0.000000 0.00000 SCALE2 0.000000 0.009297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006467 0.00000 MTRIX1 1 -0.450035 -0.814944 0.365149 51.43520 1 MTRIX2 1 0.875963 -0.482368 0.003042 -18.77490 1 MTRIX3 1 0.173656 0.321226 0.930944 -7.46858 1