data_2WT7 # _entry.id 2WT7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2WT7 PDBE EBI-41083 WWPDB D_1290041083 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WT7 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-09-11 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pogenberg, V.' 1 'Holton, S.' 2 'Wilmanns, M.' 3 # _citation.id primary _citation.title 'Design of a bZIP Transcription Factor with Homo/Heterodimer-Induced DNA-Binding Preference.' _citation.journal_abbrev Structure _citation.journal_volume 22 _citation.page_first 466 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24530283 _citation.pdbx_database_id_DOI 10.1016/J.STR.2013.12.017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pogenberg, V.' 1 ? primary 'Consani Textor, L.' 2 ? primary 'Vanhille, L.' 3 ? primary 'Holton, S.J.' 4 ? primary 'Sieweke, M.H.' 5 ? primary 'Wilmanns, M.' 6 ? # _cell.entry_id 2WT7 _cell.length_a 146.676 _cell.length_b 146.676 _cell.length_c 51.117 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WT7 _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTO-ONCOGENE PROTEIN C-FOS' 7524.621 1 ? ? 'RESIDUES 138-200' ? 2 polymer man 'TRANSCRIPTION FACTOR MAFB' 10915.589 1 ? YES 'RESIDUES 214-303' ? 3 polymer syn 'MODIFIED T-MARE MOTIF' 4897.204 1 ? ? ? ? 4 polymer syn 'MODIFIED T-MARE MOTIF' 4897.204 1 ? ? ? ? 5 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 6 water nat water 18.015 172 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'CFOS, CELLULAR ONCOGENE FOS' 2 ;MAFB, MAF-B, V-MAF MUSCULOAPONEUROTIC FIBROSARCOMA ONCOGENE HOMOLOG B, TRANSCRIPTION FACTOR MAF-1, SEGMENTATION PROTEIN KR, KREISLER ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAH EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAH A ? 2 'polypeptide(L)' no no ;DQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDA YKVKSEKLAN ; ;DQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDA YKVKSEKLAN ; B ? 3 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DT)(DG)(DC)(DT)(DG)(DA)(DC)(DT)(DC)(DA)(DT)(DA)(DG)' AATTGCTGACTCATAG C ? 4 polydeoxyribonucleotide no no '(DC)(DT)(DA)(DT)(DG)(DA)(DG)(DT)(DC)(DA)(DG)(DC)(DA)(DA)(DT)(DT)' CTATGAGTCAGCAATT D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 LYS n 1 3 ARG n 1 4 ARG n 1 5 ILE n 1 6 ARG n 1 7 ARG n 1 8 GLU n 1 9 ARG n 1 10 ASN n 1 11 LYS n 1 12 MET n 1 13 ALA n 1 14 ALA n 1 15 ALA n 1 16 LYS n 1 17 CYS n 1 18 ARG n 1 19 ASN n 1 20 ARG n 1 21 ARG n 1 22 ARG n 1 23 GLU n 1 24 LEU n 1 25 THR n 1 26 ASP n 1 27 THR n 1 28 LEU n 1 29 GLN n 1 30 ALA n 1 31 GLU n 1 32 THR n 1 33 ASP n 1 34 GLN n 1 35 LEU n 1 36 GLU n 1 37 ASP n 1 38 GLU n 1 39 LYS n 1 40 SER n 1 41 ALA n 1 42 LEU n 1 43 GLN n 1 44 THR n 1 45 GLU n 1 46 ILE n 1 47 ALA n 1 48 ASN n 1 49 LEU n 1 50 LEU n 1 51 LYS n 1 52 GLU n 1 53 LYS n 1 54 GLU n 1 55 LYS n 1 56 LEU n 1 57 GLU n 1 58 PHE n 1 59 ILE n 1 60 LEU n 1 61 ALA n 1 62 ALA n 1 63 HIS n 2 1 ASP n 2 2 GLN n 2 3 LEU n 2 4 VAL n 2 5 SER n 2 6 MET n 2 7 SER n 2 8 VAL n 2 9 ARG n 2 10 GLU n 2 11 LEU n 2 12 ASN n 2 13 ARG n 2 14 HIS n 2 15 LEU n 2 16 ARG n 2 17 GLY n 2 18 PHE n 2 19 THR n 2 20 LYS n 2 21 ASP n 2 22 GLU n 2 23 VAL n 2 24 ILE n 2 25 ARG n 2 26 LEU n 2 27 LYS n 2 28 GLN n 2 29 LYS n 2 30 ARG n 2 31 ARG n 2 32 THR n 2 33 LEU n 2 34 LYS n 2 35 ASN n 2 36 ARG n 2 37 GLY n 2 38 TYR n 2 39 ALA n 2 40 GLN n 2 41 SER n 2 42 CYS n 2 43 ARG n 2 44 TYR n 2 45 LYS n 2 46 ARG n 2 47 VAL n 2 48 GLN n 2 49 GLN n 2 50 LYS n 2 51 HIS n 2 52 HIS n 2 53 LEU n 2 54 GLU n 2 55 ASN n 2 56 GLU n 2 57 LYS n 2 58 THR n 2 59 GLN n 2 60 LEU n 2 61 ILE n 2 62 GLN n 2 63 GLN n 2 64 VAL n 2 65 GLU n 2 66 GLN n 2 67 LEU n 2 68 LYS n 2 69 GLN n 2 70 GLU n 2 71 VAL n 2 72 SER n 2 73 ARG n 2 74 LEU n 2 75 ALA n 2 76 ARG n 2 77 GLU n 2 78 ARG n 2 79 ASP n 2 80 ALA n 2 81 TYR n 2 82 LYS n 2 83 VAL n 2 84 LYS n 2 85 SER n 2 86 GLU n 2 87 LYS n 2 88 LEU n 2 89 ALA n 2 90 ASN n 3 1 DA n 3 2 DA n 3 3 DT n 3 4 DT n 3 5 DG n 3 6 DC n 3 7 DT n 3 8 DG n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DC n 3 13 DA n 3 14 DT n 3 15 DA n 3 16 DG n 4 1 DC n 4 2 DT n 4 3 DA n 4 4 DT n 4 5 DG n 4 6 DA n 4 7 DG n 4 8 DT n 4 9 DC n 4 10 DA n 4 11 DG n 4 12 DC n 4 13 DA n 4 14 DA n 4 15 DT n 4 16 DT n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'HOUSE MOUSE' ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'CODON PLUS RIL' ? ? ? ? ? ? ? PET-M11 ? ? ? ? ? 2 1 sample ? ? ? 'HOUSE MOUSE' ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'CODON PLUS RIL' ? ? ? ? ? ? ? PET-M11 ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? 4 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP FOS_MOUSE 1 ? ? P01101 ? 2 UNP MAFB_MOUSE 2 ? ? P54841 ? 3 PDB 2WT7 3 ? ? 2WT7 ? 4 PDB 2WT7 4 ? ? 2WT7 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2WT7 A 1 ? 63 ? P01101 138 ? 200 ? 138 200 2 2 2WT7 B 1 ? 90 ? P54841 214 ? 303 ? 214 303 3 3 2WT7 C 1 ? 16 ? 2WT7 1 ? 16 ? 1 16 4 4 2WT7 D 1 ? 16 ? 2WT7 1 ? 16 ? 1 16 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 2WT7 _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 85 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P54841 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 298 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 298 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WT7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_percent_sol 51.3 _exptl_crystal.description NONE # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'MAR555 FLAT PANEL' 2006-06-05 ? 2 CCD MARESEARCH ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.8162 1.0 2 1.50100 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'EMBL/DESY, HAMBURG BEAMLINE X11' 'EMBL/DESY, HAMBURG' X11 0.8162 ? 2 SYNCHROTRON 'EMBL/DESY, HAMBURG BEAMLINE BW7A' 'EMBL/DESY, HAMBURG' BW7A 1.50100 ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WT7 _reflns.observed_criterion_sigma_I 2.4 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 47.40 _reflns.d_resolution_high 2.30 _reflns.number_obs 28122 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.10 _reflns.B_iso_Wilson_estimate 57.6 _reflns.pdbx_redundancy 11.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.32 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.40 _reflns_shell.pdbx_redundancy 10.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WT7 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 26707 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 127.00 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.51 _refine.ls_R_factor_obs 0.22967 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22826 _refine.ls_R_factor_R_free 0.25579 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1415 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 44.611 _refine.aniso_B[1][1] 0.48 _refine.aniso_B[2][2] 0.48 _refine.aniso_B[3][3] -0.72 _refine.aniso_B[1][2] 0.24 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. ; _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.186 _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML 0.111 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.433 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1290 _refine_hist.pdbx_number_atoms_nucleic_acid 650 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 172 _refine_hist.number_atoms_total 2117 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 127.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 2094 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.391 2.362 ? 2946 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.150 5.000 ? 165 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 27.771 23.333 ? 81 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.994 15.000 ? 307 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.959 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.066 0.200 ? 321 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1366 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.686 1.500 ? 796 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.366 2.000 ? 1285 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.814 3.000 ? 1298 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.856 4.500 ? 1658 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 1962 _refine_ls_shell.R_factor_R_work 0.293 _refine_ls_shell.percent_reflns_obs 98.90 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 102 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2WT7 _struct.title 'Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNA' _struct.pdbx_descriptor 'PROTO-ONCOGENE PROTEIN C-FOS, TRANSCRIPTION FACTOR MAFB' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WT7 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;TRANSCRIPTION, TRANSCRIPTION REGULATION, NUCLEUS, ACTIVATOR, REPRESSOR, DNA-BINDING, PHOSPHOPROTEIN, DIFFERENTIATION, TUMOR SUPPRESSOR, PROLIFERATION, PROTO-ONCOGENE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 1 ? HIS A 63 ? GLU A 138 HIS A 200 1 ? 63 HELX_P HELX_P2 2 ASP B 1 ? MET B 6 ? ASP B 214 MET B 219 1 ? 6 HELX_P HELX_P3 3 SER B 7 ? ARG B 16 ? SER B 220 ARG B 229 1 ? 10 HELX_P HELX_P4 4 THR B 19 ? ALA B 89 ? THR B 232 ALA B 302 1 ? 71 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? C DA 1 N6 ? ? ? 1_555 D DT 16 O4 ? ? C DA 1 D DT 16 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog2 hydrog ? ? C DA 1 N7 ? ? ? 1_555 D DT 16 N3 ? ? C DA 1 D DT 16 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog3 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 15 N3 ? ? C DA 2 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 15 O4 ? ? C DA 2 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? C DT 3 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? C DT 3 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 13 N1 ? ? C DT 4 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 13 N6 ? ? C DT 4 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 5 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 5 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 5 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 11 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 11 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 12 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 12 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 12 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 13 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 13 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 14 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 14 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 15 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 15 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? C DG 16 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 16 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? C DG 16 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 16 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? C DG 16 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 16 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 C 1017' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG A 18 ? ARG A 155 . ? 1_555 ? 2 AC1 9 ARG A 21 ? ARG A 158 . ? 1_555 ? 3 AC1 9 ARG B 43 ? ARG B 256 . ? 1_555 ? 4 AC1 9 ARG B 46 ? ARG B 259 . ? 1_555 ? 5 AC1 9 DG C 8 ? DG C 8 . ? 1_555 ? 6 AC1 9 DA C 9 ? DA C 9 . ? 1_555 ? 7 AC1 9 HOH H . ? HOH C 2032 . ? 1_555 ? 8 AC1 9 HOH H . ? HOH C 2033 . ? 1_555 ? 9 AC1 9 HOH H . ? HOH C 2034 . ? 1_555 ? # _database_PDB_matrix.entry_id 2WT7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WT7 _atom_sites.fract_transf_matrix[1][1] 0.006818 _atom_sites.fract_transf_matrix[1][2] 0.003936 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007872 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019563 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 138 138 GLU GLU A . n A 1 2 LYS 2 139 139 LYS LYS A . n A 1 3 ARG 3 140 140 ARG ARG A . n A 1 4 ARG 4 141 141 ARG ARG A . n A 1 5 ILE 5 142 142 ILE ILE A . n A 1 6 ARG 6 143 143 ARG ARG A . n A 1 7 ARG 7 144 144 ARG ARG A . n A 1 8 GLU 8 145 145 GLU GLU A . n A 1 9 ARG 9 146 146 ARG ARG A . n A 1 10 ASN 10 147 147 ASN ASN A . n A 1 11 LYS 11 148 148 LYS LYS A . n A 1 12 MET 12 149 149 MET MET A . n A 1 13 ALA 13 150 150 ALA ALA A . n A 1 14 ALA 14 151 151 ALA ALA A . n A 1 15 ALA 15 152 152 ALA ALA A . n A 1 16 LYS 16 153 153 LYS LYS A . n A 1 17 CYS 17 154 154 CYS CYS A . n A 1 18 ARG 18 155 155 ARG ARG A . n A 1 19 ASN 19 156 156 ASN ASN A . n A 1 20 ARG 20 157 157 ARG ARG A . n A 1 21 ARG 21 158 158 ARG ARG A . n A 1 22 ARG 22 159 159 ARG ARG A . n A 1 23 GLU 23 160 160 GLU GLU A . n A 1 24 LEU 24 161 161 LEU LEU A . n A 1 25 THR 25 162 162 THR THR A . n A 1 26 ASP 26 163 163 ASP ASP A . n A 1 27 THR 27 164 164 THR THR A . n A 1 28 LEU 28 165 165 LEU LEU A . n A 1 29 GLN 29 166 166 GLN GLN A . n A 1 30 ALA 30 167 167 ALA ALA A . n A 1 31 GLU 31 168 168 GLU GLU A . n A 1 32 THR 32 169 169 THR THR A . n A 1 33 ASP 33 170 170 ASP ASP A . n A 1 34 GLN 34 171 171 GLN GLN A . n A 1 35 LEU 35 172 172 LEU LEU A . n A 1 36 GLU 36 173 173 GLU GLU A . n A 1 37 ASP 37 174 174 ASP ASP A . n A 1 38 GLU 38 175 175 GLU GLU A . n A 1 39 LYS 39 176 176 LYS LYS A . n A 1 40 SER 40 177 177 SER SER A . n A 1 41 ALA 41 178 178 ALA ALA A . n A 1 42 LEU 42 179 179 LEU LEU A . n A 1 43 GLN 43 180 180 GLN GLN A . n A 1 44 THR 44 181 181 THR THR A . n A 1 45 GLU 45 182 182 GLU GLU A . n A 1 46 ILE 46 183 183 ILE ILE A . n A 1 47 ALA 47 184 184 ALA ALA A . n A 1 48 ASN 48 185 185 ASN ASN A . n A 1 49 LEU 49 186 186 LEU LEU A . n A 1 50 LEU 50 187 187 LEU LEU A . n A 1 51 LYS 51 188 188 LYS LYS A . n A 1 52 GLU 52 189 189 GLU GLU A . n A 1 53 LYS 53 190 190 LYS LYS A . n A 1 54 GLU 54 191 191 GLU GLU A . n A 1 55 LYS 55 192 192 LYS LYS A . n A 1 56 LEU 56 193 193 LEU LEU A . n A 1 57 GLU 57 194 194 GLU GLU A . n A 1 58 PHE 58 195 195 PHE PHE A . n A 1 59 ILE 59 196 196 ILE ILE A . n A 1 60 LEU 60 197 197 LEU LEU A . n A 1 61 ALA 61 198 198 ALA ALA A . n A 1 62 ALA 62 199 199 ALA ALA A . n A 1 63 HIS 63 200 200 HIS HIS A . n B 2 1 ASP 1 214 214 ASP ASP B . n B 2 2 GLN 2 215 215 GLN GLN B . n B 2 3 LEU 3 216 216 LEU LEU B . n B 2 4 VAL 4 217 217 VAL VAL B . n B 2 5 SER 5 218 218 SER SER B . n B 2 6 MET 6 219 219 MET MET B . n B 2 7 SER 7 220 220 SER SER B . n B 2 8 VAL 8 221 221 VAL VAL B . n B 2 9 ARG 9 222 222 ARG ARG B . n B 2 10 GLU 10 223 223 GLU GLU B . n B 2 11 LEU 11 224 224 LEU LEU B . n B 2 12 ASN 12 225 225 ASN ASN B . n B 2 13 ARG 13 226 226 ARG ARG B . n B 2 14 HIS 14 227 227 HIS HIS B . n B 2 15 LEU 15 228 228 LEU LEU B . n B 2 16 ARG 16 229 229 ARG ARG B . n B 2 17 GLY 17 230 230 GLY GLY B . n B 2 18 PHE 18 231 231 PHE PHE B . n B 2 19 THR 19 232 232 THR THR B . n B 2 20 LYS 20 233 233 LYS LYS B . n B 2 21 ASP 21 234 234 ASP ASP B . n B 2 22 GLU 22 235 235 GLU GLU B . n B 2 23 VAL 23 236 236 VAL VAL B . n B 2 24 ILE 24 237 237 ILE ILE B . n B 2 25 ARG 25 238 238 ARG ARG B . n B 2 26 LEU 26 239 239 LEU LEU B . n B 2 27 LYS 27 240 240 LYS LYS B . n B 2 28 GLN 28 241 241 GLN GLN B . n B 2 29 LYS 29 242 242 LYS LYS B . n B 2 30 ARG 30 243 243 ARG ARG B . n B 2 31 ARG 31 244 244 ARG ARG B . n B 2 32 THR 32 245 245 THR THR B . n B 2 33 LEU 33 246 246 LEU LEU B . n B 2 34 LYS 34 247 247 LYS LYS B . n B 2 35 ASN 35 248 248 ASN ASN B . n B 2 36 ARG 36 249 249 ARG ARG B . n B 2 37 GLY 37 250 250 GLY GLY B . n B 2 38 TYR 38 251 251 TYR TYR B . n B 2 39 ALA 39 252 252 ALA ALA B . n B 2 40 GLN 40 253 253 GLN GLN B . n B 2 41 SER 41 254 254 SER SER B . n B 2 42 CYS 42 255 255 CYS CYS B . n B 2 43 ARG 43 256 256 ARG ARG B . n B 2 44 TYR 44 257 257 TYR TYR B . n B 2 45 LYS 45 258 258 LYS LYS B . n B 2 46 ARG 46 259 259 ARG ARG B . n B 2 47 VAL 47 260 260 VAL VAL B . n B 2 48 GLN 48 261 261 GLN GLN B . n B 2 49 GLN 49 262 262 GLN GLN B . n B 2 50 LYS 50 263 263 LYS LYS B . n B 2 51 HIS 51 264 264 HIS HIS B . n B 2 52 HIS 52 265 265 HIS HIS B . n B 2 53 LEU 53 266 266 LEU LEU B . n B 2 54 GLU 54 267 267 GLU GLU B . n B 2 55 ASN 55 268 268 ASN ASN B . n B 2 56 GLU 56 269 269 GLU GLU B . n B 2 57 LYS 57 270 270 LYS LYS B . n B 2 58 THR 58 271 271 THR THR B . n B 2 59 GLN 59 272 272 GLN GLN B . n B 2 60 LEU 60 273 273 LEU LEU B . n B 2 61 ILE 61 274 274 ILE ILE B . n B 2 62 GLN 62 275 275 GLN GLN B . n B 2 63 GLN 63 276 276 GLN GLN B . n B 2 64 VAL 64 277 277 VAL VAL B . n B 2 65 GLU 65 278 278 GLU GLU B . n B 2 66 GLN 66 279 279 GLN GLN B . n B 2 67 LEU 67 280 280 LEU LEU B . n B 2 68 LYS 68 281 281 LYS LYS B . n B 2 69 GLN 69 282 282 GLN GLN B . n B 2 70 GLU 70 283 283 GLU GLU B . n B 2 71 VAL 71 284 284 VAL VAL B . n B 2 72 SER 72 285 285 SER SER B . n B 2 73 ARG 73 286 286 ARG ARG B . n B 2 74 LEU 74 287 287 LEU LEU B . n B 2 75 ALA 75 288 288 ALA ALA B . n B 2 76 ARG 76 289 289 ARG ARG B . n B 2 77 GLU 77 290 290 GLU GLU B . n B 2 78 ARG 78 291 291 ARG ARG B . n B 2 79 ASP 79 292 292 ASP ASP B . n B 2 80 ALA 80 293 293 ALA ALA B . n B 2 81 TYR 81 294 294 TYR TYR B . n B 2 82 LYS 82 295 295 LYS LYS B . n B 2 83 VAL 83 296 296 VAL VAL B . n B 2 84 LYS 84 297 297 LYS LYS B . n B 2 85 SER 85 298 298 SER SER B . n B 2 86 GLU 86 299 299 GLU GLU B . n B 2 87 LYS 87 300 300 LYS LYS B . n B 2 88 LEU 88 301 301 LEU LEU B . n B 2 89 ALA 89 302 302 ALA ALA B . n B 2 90 ASN 90 303 303 ASN ASN B . n C 3 1 DA 1 1 1 DA DA C . n C 3 2 DA 2 2 2 DA DA C . n C 3 3 DT 3 3 3 DT DT C . n C 3 4 DT 4 4 4 DT DT C . n C 3 5 DG 5 5 5 DG DG C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DG 8 8 8 DG DG C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DC 10 10 10 DC DC C . n C 3 11 DT 11 11 11 DT DT C . n C 3 12 DC 12 12 12 DC DC C . n C 3 13 DA 13 13 13 DA DA C . n C 3 14 DT 14 14 14 DT DT C . n C 3 15 DA 15 15 15 DA DA C . n C 3 16 DG 16 16 16 DG DG C . n D 4 1 DC 1 1 1 DC DC D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DA 3 3 3 DA DA D . n D 4 4 DT 4 4 4 DT DT D . n D 4 5 DG 5 5 5 DG DG D . n D 4 6 DA 6 6 6 DA DA D . n D 4 7 DG 7 7 7 DG DG D . n D 4 8 DT 8 8 8 DT DT D . n D 4 9 DC 9 9 9 DC DC D . n D 4 10 DA 10 10 10 DA DA D . n D 4 11 DG 11 11 11 DG DG D . n D 4 12 DC 12 12 12 DC DC D . n D 4 13 DA 13 13 13 DA DA D . n D 4 14 DA 14 14 14 DA DA D . n D 4 15 DT 15 15 15 DT DT D . n D 4 16 DT 16 16 16 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PO4 1 1017 1017 PO4 PO4 C . F 6 HOH 1 2001 2001 HOH HOH A . F 6 HOH 2 2002 2002 HOH HOH A . F 6 HOH 3 2003 2003 HOH HOH A . F 6 HOH 4 2004 2004 HOH HOH A . F 6 HOH 5 2005 2005 HOH HOH A . F 6 HOH 6 2006 2006 HOH HOH A . F 6 HOH 7 2007 2007 HOH HOH A . F 6 HOH 8 2008 2008 HOH HOH A . F 6 HOH 9 2009 2009 HOH HOH A . F 6 HOH 10 2010 2010 HOH HOH A . F 6 HOH 11 2011 2011 HOH HOH A . F 6 HOH 12 2012 2012 HOH HOH A . F 6 HOH 13 2013 2013 HOH HOH A . F 6 HOH 14 2014 2014 HOH HOH A . F 6 HOH 15 2015 2015 HOH HOH A . F 6 HOH 16 2016 2016 HOH HOH A . F 6 HOH 17 2017 2017 HOH HOH A . F 6 HOH 18 2018 2018 HOH HOH A . F 6 HOH 19 2019 2019 HOH HOH A . F 6 HOH 20 2020 2020 HOH HOH A . F 6 HOH 21 2021 2021 HOH HOH A . F 6 HOH 22 2022 2022 HOH HOH A . F 6 HOH 23 2023 2023 HOH HOH A . F 6 HOH 24 2024 2024 HOH HOH A . F 6 HOH 25 2025 2025 HOH HOH A . F 6 HOH 26 2026 2026 HOH HOH A . F 6 HOH 27 2027 2027 HOH HOH A . F 6 HOH 28 2028 2028 HOH HOH A . F 6 HOH 29 2029 2029 HOH HOH A . F 6 HOH 30 2030 2030 HOH HOH A . F 6 HOH 31 2031 2031 HOH HOH A . F 6 HOH 32 2032 2032 HOH HOH A . F 6 HOH 33 2033 2033 HOH HOH A . F 6 HOH 34 2034 2034 HOH HOH A . F 6 HOH 35 2035 2035 HOH HOH A . F 6 HOH 36 2036 2036 HOH HOH A . F 6 HOH 37 2037 2037 HOH HOH A . F 6 HOH 38 2038 2038 HOH HOH A . F 6 HOH 39 2039 2039 HOH HOH A . F 6 HOH 40 2040 2040 HOH HOH A . F 6 HOH 41 2041 2041 HOH HOH A . F 6 HOH 42 2042 2042 HOH HOH A . F 6 HOH 43 2043 2043 HOH HOH A . F 6 HOH 44 2044 2044 HOH HOH A . F 6 HOH 45 2045 2045 HOH HOH A . F 6 HOH 46 2046 2046 HOH HOH A . G 6 HOH 1 2001 2001 HOH HOH B . G 6 HOH 2 2002 2002 HOH HOH B . G 6 HOH 3 2003 2003 HOH HOH B . G 6 HOH 4 2004 2004 HOH HOH B . G 6 HOH 5 2005 2005 HOH HOH B . G 6 HOH 6 2006 2006 HOH HOH B . G 6 HOH 7 2007 2007 HOH HOH B . G 6 HOH 8 2008 2008 HOH HOH B . G 6 HOH 9 2009 2009 HOH HOH B . G 6 HOH 10 2010 2010 HOH HOH B . G 6 HOH 11 2011 2011 HOH HOH B . G 6 HOH 12 2012 2012 HOH HOH B . G 6 HOH 13 2013 2013 HOH HOH B . G 6 HOH 14 2014 2014 HOH HOH B . G 6 HOH 15 2015 2015 HOH HOH B . G 6 HOH 16 2016 2016 HOH HOH B . G 6 HOH 17 2017 2017 HOH HOH B . G 6 HOH 18 2018 2018 HOH HOH B . G 6 HOH 19 2019 2019 HOH HOH B . G 6 HOH 20 2020 2020 HOH HOH B . G 6 HOH 21 2021 2021 HOH HOH B . G 6 HOH 22 2022 2022 HOH HOH B . G 6 HOH 23 2023 2023 HOH HOH B . G 6 HOH 24 2024 2024 HOH HOH B . G 6 HOH 25 2025 2025 HOH HOH B . G 6 HOH 26 2026 2026 HOH HOH B . G 6 HOH 27 2027 2027 HOH HOH B . G 6 HOH 28 2028 2028 HOH HOH B . G 6 HOH 29 2029 2029 HOH HOH B . G 6 HOH 30 2030 2030 HOH HOH B . G 6 HOH 31 2031 2031 HOH HOH B . G 6 HOH 32 2032 2032 HOH HOH B . G 6 HOH 33 2033 2033 HOH HOH B . G 6 HOH 34 2034 2034 HOH HOH B . G 6 HOH 35 2035 2035 HOH HOH B . G 6 HOH 36 2036 2036 HOH HOH B . G 6 HOH 37 2037 2037 HOH HOH B . G 6 HOH 38 2038 2038 HOH HOH B . G 6 HOH 39 2039 2039 HOH HOH B . G 6 HOH 40 2040 2040 HOH HOH B . G 6 HOH 41 2041 2041 HOH HOH B . G 6 HOH 42 2042 2042 HOH HOH B . G 6 HOH 43 2043 2043 HOH HOH B . G 6 HOH 44 2044 2044 HOH HOH B . G 6 HOH 45 2045 2045 HOH HOH B . G 6 HOH 46 2046 2046 HOH HOH B . G 6 HOH 47 2047 2047 HOH HOH B . G 6 HOH 48 2048 2048 HOH HOH B . G 6 HOH 49 2049 2049 HOH HOH B . H 6 HOH 1 2001 2001 HOH HOH C . H 6 HOH 2 2002 2002 HOH HOH C . H 6 HOH 3 2003 2003 HOH HOH C . H 6 HOH 4 2004 2004 HOH HOH C . H 6 HOH 5 2005 2005 HOH HOH C . H 6 HOH 6 2006 2006 HOH HOH C . H 6 HOH 7 2007 2007 HOH HOH C . H 6 HOH 8 2008 2008 HOH HOH C . H 6 HOH 9 2009 2009 HOH HOH C . H 6 HOH 10 2010 2010 HOH HOH C . H 6 HOH 11 2011 2011 HOH HOH C . H 6 HOH 12 2012 2012 HOH HOH C . H 6 HOH 13 2013 2013 HOH HOH C . H 6 HOH 14 2014 2014 HOH HOH C . H 6 HOH 15 2015 2015 HOH HOH C . H 6 HOH 16 2016 2016 HOH HOH C . H 6 HOH 17 2017 2017 HOH HOH C . H 6 HOH 18 2018 2018 HOH HOH C . H 6 HOH 19 2019 2019 HOH HOH C . H 6 HOH 20 2020 2020 HOH HOH C . H 6 HOH 21 2021 2021 HOH HOH C . H 6 HOH 22 2022 2022 HOH HOH C . H 6 HOH 23 2023 2023 HOH HOH C . H 6 HOH 24 2024 2024 HOH HOH C . H 6 HOH 25 2025 2025 HOH HOH C . H 6 HOH 26 2026 2026 HOH HOH C . H 6 HOH 27 2027 2027 HOH HOH C . H 6 HOH 28 2028 2028 HOH HOH C . H 6 HOH 29 2029 2029 HOH HOH C . H 6 HOH 30 2030 2030 HOH HOH C . H 6 HOH 31 2031 2031 HOH HOH C . H 6 HOH 32 2032 2032 HOH HOH C . H 6 HOH 33 2033 2033 HOH HOH C . H 6 HOH 34 2034 2034 HOH HOH C . I 6 HOH 1 2001 2001 HOH HOH D . I 6 HOH 2 2002 2002 HOH HOH D . I 6 HOH 3 2003 2003 HOH HOH D . I 6 HOH 4 2004 2004 HOH HOH D . I 6 HOH 5 2005 2005 HOH HOH D . I 6 HOH 6 2006 2006 HOH HOH D . I 6 HOH 7 2007 2007 HOH HOH D . I 6 HOH 8 2008 2008 HOH HOH D . I 6 HOH 9 2009 2009 HOH HOH D . I 6 HOH 10 2010 2010 HOH HOH D . I 6 HOH 11 2011 2011 HOH HOH D . I 6 HOH 12 2012 2012 HOH HOH D . I 6 HOH 13 2013 2013 HOH HOH D . I 6 HOH 14 2014 2014 HOH HOH D . I 6 HOH 15 2015 2015 HOH HOH D . I 6 HOH 16 2016 2016 HOH HOH D . I 6 HOH 17 2017 2017 HOH HOH D . I 6 HOH 18 2018 2018 HOH HOH D . I 6 HOH 19 2019 2019 HOH HOH D . I 6 HOH 20 2020 2020 HOH HOH D . I 6 HOH 21 2021 2021 HOH HOH D . I 6 HOH 22 2022 2022 HOH HOH D . I 6 HOH 23 2023 2023 HOH HOH D . I 6 HOH 24 2024 2024 HOH HOH D . I 6 HOH 25 2025 2025 HOH HOH D . I 6 HOH 26 2026 2026 HOH HOH D . I 6 HOH 27 2027 2027 HOH HOH D . I 6 HOH 28 2028 2028 HOH HOH D . I 6 HOH 29 2029 2029 HOH HOH D . I 6 HOH 30 2030 2030 HOH HOH D . I 6 HOH 31 2031 2031 HOH HOH D . I 6 HOH 32 2032 2032 HOH HOH D . I 6 HOH 33 2033 2033 HOH HOH D . I 6 HOH 34 2034 2034 HOH HOH D . I 6 HOH 35 2035 2035 HOH HOH D . I 6 HOH 36 2036 2036 HOH HOH D . I 6 HOH 37 2037 2037 HOH HOH D . I 6 HOH 38 2038 2038 HOH HOH D . I 6 HOH 39 2039 2039 HOH HOH D . I 6 HOH 40 2040 2040 HOH HOH D . I 6 HOH 41 2041 2041 HOH HOH D . I 6 HOH 42 2042 2042 HOH HOH D . I 6 HOH 43 2043 2043 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6840 ? 1 MORE -58.7 ? 1 'SSA (A^2)' 15640 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2034 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-29 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 1 2 2014-02-26 4 'Structure model' 1 3 2014-03-19 5 'Structure model' 1 4 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category diffrn_source # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 5 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_source.pdbx_synchrotron_site' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 41.3500 -39.3040 -6.1900 -0.1627 -0.1296 0.0803 -0.0491 0.0039 -0.0192 0.4351 7.6839 0.1211 -1.0811 -0.2257 0.4193 0.0677 0.0833 -0.0734 -0.3980 0.0364 -0.3381 0.0521 0.0016 -0.1042 'X-RAY DIFFRACTION' 2 ? refined 34.9090 -18.1860 -1.6940 -0.1501 -0.2515 -0.2050 -0.0516 -0.0070 0.0002 1.5458 3.0048 10.0205 -0.5869 1.4164 0.1197 -0.0288 -0.0575 -0.0189 0.1965 0.0521 0.0441 -0.0852 -0.1527 -0.0234 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 138 ? ? A 200 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 214 ? ? B 303 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 C 1 ? ? C 16 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 D 1 ? ? D 16 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0069 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHELXD phasing . ? 4 # _pdbx_database_remark.id 650 _pdbx_database_remark.text ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 2WT7 _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN B, CYS 298 TO SER' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 1 ? ? "C1'" C DA 1 ? ? "C2'" C DA 1 ? ? 100.83 105.90 -5.07 0.80 N 2 1 "O4'" C DT 4 ? ? "C1'" C DT 4 ? ? N1 C DT 4 ? ? 102.86 108.00 -5.14 0.70 N 3 1 "C3'" C DT 14 ? ? "C2'" C DT 14 ? ? "C1'" C DT 14 ? ? 95.64 102.40 -6.76 0.80 N 4 1 "O4'" C DT 14 ? ? "C1'" C DT 14 ? ? N1 C DT 14 ? ? 111.35 108.30 3.05 0.30 N 5 1 C5 C DT 14 ? ? C4 C DT 14 ? ? O4 C DT 14 ? ? 120.54 124.90 -4.36 0.70 N 6 1 "O4'" C DA 15 ? ? "C1'" C DA 15 ? ? N9 C DA 15 ? ? 103.25 108.00 -4.75 0.70 N 7 1 "O4'" D DA 3 ? ? "C1'" D DA 3 ? ? N9 D DA 3 ? ? 102.55 108.00 -5.45 0.70 N 8 1 "O4'" D DG 5 ? ? "C1'" D DG 5 ? ? N9 D DG 5 ? ? 102.40 108.00 -5.60 0.70 N 9 1 "O4'" D DC 9 ? ? "C1'" D DC 9 ? ? N1 D DC 9 ? ? 110.14 108.30 1.84 0.30 N 10 1 "O4'" D DT 15 ? ? "C1'" D DT 15 ? ? N1 D DT 15 ? ? 102.36 108.00 -5.64 0.70 N # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2WT7 'double helix' 2WT7 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DA 1 1_555 D DT 16 1_555 0.354 -3.042 -0.758 19.638 4.019 93.884 1 C_DA1:DT16_D C 1 ? D 16 ? 23 3 1 C DA 2 1_555 D DT 15 1_555 0.058 -0.098 0.185 2.992 -21.410 7.444 2 C_DA2:DT15_D C 2 ? D 15 ? 20 1 1 C DT 3 1_555 D DA 14 1_555 -0.006 -0.015 0.146 -2.141 -15.741 7.856 3 C_DT3:DA14_D C 3 ? D 14 ? 20 1 1 C DT 4 1_555 D DA 13 1_555 0.027 -0.088 0.055 -8.565 -17.085 5.742 4 C_DT4:DA13_D C 4 ? D 13 ? 20 1 1 C DG 5 1_555 D DC 12 1_555 -0.387 -0.240 -0.032 -5.534 -9.300 -0.215 5 C_DG5:DC12_D C 5 ? D 12 ? 19 1 1 C DC 6 1_555 D DG 11 1_555 0.237 -0.196 0.163 -5.526 -4.937 -0.663 6 C_DC6:DG11_D C 6 ? D 11 ? 19 1 1 C DT 7 1_555 D DA 10 1_555 0.244 -0.035 -0.194 9.242 -9.481 4.318 7 C_DT7:DA10_D C 7 ? D 10 ? 20 1 1 C DG 8 1_555 D DC 9 1_555 -0.158 -0.153 -0.260 -5.733 -6.518 -0.377 8 C_DG8:DC9_D C 8 ? D 9 ? 19 1 1 C DA 9 1_555 D DT 8 1_555 -0.020 -0.023 -0.137 -5.457 -13.438 7.830 9 C_DA9:DT8_D C 9 ? D 8 ? 20 1 1 C DC 10 1_555 D DG 7 1_555 0.414 -0.159 0.138 -2.817 -9.842 -1.281 10 C_DC10:DG7_D C 10 ? D 7 ? 19 1 1 C DT 11 1_555 D DA 6 1_555 -0.205 -0.098 0.129 -1.248 -10.671 7.158 11 C_DT11:DA6_D C 11 ? D 6 ? 20 1 1 C DC 12 1_555 D DG 5 1_555 0.110 -0.100 -0.106 6.900 -10.123 1.665 12 C_DC12:DG5_D C 12 ? D 5 ? 19 1 1 C DA 13 1_555 D DT 4 1_555 0.180 -0.149 0.031 2.340 -14.264 2.580 13 C_DA13:DT4_D C 13 ? D 4 ? 20 1 1 C DT 14 1_555 D DA 3 1_555 -0.123 -0.035 -0.145 13.972 -7.780 5.701 14 C_DT14:DA3_D C 14 ? D 3 ? 20 1 1 C DA 15 1_555 D DT 2 1_555 0.059 -0.262 0.000 -4.754 -13.550 -0.487 15 C_DA15:DT2_D C 15 ? D 2 ? 20 1 1 C DG 16 1_555 D DC 1 1_555 -0.107 -0.323 0.519 3.560 -16.676 0.658 16 C_DG16:DC1_D C 16 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DA 1 1_555 D DT 16 1_555 C DA 2 1_555 D DT 15 1_555 -1.604 -2.760 -1.006 133.768 -115.946 118.250 -1.521 0.639 -0.559 -58.111 -67.043 178.473 1 CC_DA1DA2:DT15DT16_DD C 1 ? D 16 ? C 2 ? D 15 ? 1 C DA 2 1_555 D DT 15 1_555 C DT 3 1_555 D DA 14 1_555 0.272 -0.627 3.348 0.260 0.036 33.126 -1.105 -0.432 3.350 0.062 -0.456 33.127 2 CC_DA2DT3:DA14DT15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DT 4 1_555 D DA 13 1_555 0.249 -0.400 3.272 2.585 3.484 37.156 -1.081 -0.050 3.232 5.444 -4.039 37.400 3 CC_DT3DT4:DA13DA14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 C DT 4 1_555 D DA 13 1_555 C DG 5 1_555 D DC 12 1_555 -0.339 0.157 3.191 -2.223 10.237 31.543 -1.423 0.225 3.106 18.214 3.956 33.195 4 CC_DT4DG5:DC12DA13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 C DG 5 1_555 D DC 12 1_555 C DC 6 1_555 D DG 11 1_555 0.371 -0.246 3.345 0.078 1.450 36.748 -0.591 -0.578 3.334 2.299 -0.123 36.775 5 CC_DG5DC6:DG11DC12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 C DC 6 1_555 D DG 11 1_555 C DT 7 1_555 D DA 10 1_555 -0.031 0.140 2.935 3.536 8.278 24.474 -1.741 0.944 2.799 18.736 -8.004 26.054 6 CC_DC6DT7:DA10DG11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 C DT 7 1_555 D DA 10 1_555 C DG 8 1_555 D DC 9 1_555 -0.332 0.366 3.533 -1.051 8.450 43.279 -0.381 0.334 3.547 11.326 1.408 44.070 7 CC_DT7DG8:DC9DA10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 C DG 8 1_555 D DC 9 1_555 C DA 9 1_555 D DT 8 1_555 0.278 -0.093 3.222 -1.853 7.290 32.171 -1.376 -0.796 3.106 12.934 3.288 33.016 8 CC_DG8DA9:DT8DC9_DD C 8 ? D 9 ? C 9 ? D 8 ? 1 C DA 9 1_555 D DT 8 1_555 C DC 10 1_555 D DG 7 1_555 -0.700 -0.365 3.196 -2.880 0.023 36.579 -0.582 0.725 3.240 0.037 4.579 36.689 9 CC_DA9DC10:DG7DT8_DD C 9 ? D 8 ? C 10 ? D 7 ? 1 C DC 10 1_555 D DG 7 1_555 C DT 11 1_555 D DA 6 1_555 0.889 -0.349 3.117 2.421 4.214 34.165 -1.213 -1.140 3.107 7.129 -4.094 34.499 10 CC_DC10DT11:DA6DG7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 C DT 11 1_555 D DA 6 1_555 C DC 12 1_555 D DG 5 1_555 -0.624 0.430 3.097 2.441 5.388 32.794 -0.103 1.476 3.073 9.447 -4.281 33.309 11 CC_DT11DC12:DG5DA6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 C DC 12 1_555 D DG 5 1_555 C DA 13 1_555 D DT 4 1_555 0.494 0.314 3.321 2.548 9.205 39.162 -0.620 -0.420 3.333 13.491 -3.734 40.266 12 CC_DC12DA13:DT4DG5_DD C 12 ? D 5 ? C 13 ? D 4 ? 1 C DA 13 1_555 D DT 4 1_555 C DT 14 1_555 D DA 3 1_555 0.605 -0.588 2.997 1.525 -1.265 24.780 -1.013 -0.980 3.054 -2.942 -3.547 24.857 13 CC_DA13DT14:DA3DT4_DD C 13 ? D 4 ? C 14 ? D 3 ? 1 C DT 14 1_555 D DA 3 1_555 C DA 15 1_555 D DT 2 1_555 -0.286 0.254 3.673 0.221 -1.561 47.585 0.455 0.375 3.662 -1.934 -0.273 47.609 14 CC_DT14DA15:DT2DA3_DD C 14 ? D 3 ? C 15 ? D 2 ? 1 C DA 15 1_555 D DT 2 1_555 C DG 16 1_555 D DC 1 1_555 0.311 -0.347 3.053 -4.650 4.921 33.586 -1.303 -1.203 2.907 8.410 7.947 34.243 15 CC_DA15DG16:DC1DT2_DD C 15 ? D 2 ? C 16 ? D 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'PHOSPHATE ION' PO4 6 water HOH #