HEADER TRANSFERASE 08-DEC-09 2X0F TITLE STRUCTURE OF WSAF IN COMPLEX WITH DTDP-BETA-L-RHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: WSAF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RHAMNOSYLTRANSFERASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 STRAIN: 2004/3A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, GT4 FAMILY EXPDTA X-RAY DIFFRACTION AUTHOR K.STEINER,G.HAGELUEKEN,J.H.NAISMITH REVDAT 3 20-DEC-23 2X0F 1 REMARK REVDAT 2 16-MAR-10 2X0F 1 JRNL REMARK REVDAT 1 02-FEB-10 2X0F 0 JRNL AUTH K.STEINER,G.HAGELUEKEN,P.MESSNER,C.SCHAEFFER,J.H.NAISMITH JRNL TITL STRUCTURAL BASIS OF SUBSTRATE BINDING IN WSAF, A JRNL TITL 2 RHAMNOSYLTRANSFERASE FROM GEOBACILLUS STEAROTHERMOPHILUS. JRNL REF J.MOL.BIOL. V. 397 436 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20097205 JRNL DOI 10.1016/J.JMB.2010.01.035 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_216) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 52027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4314 - 5.4826 0.96 5009 255 0.1659 0.1814 REMARK 3 2 5.4826 - 4.3568 0.99 5117 287 0.1341 0.1817 REMARK 3 3 4.3568 - 3.8075 0.99 5172 255 0.1412 0.1702 REMARK 3 4 3.8075 - 3.4600 0.99 5144 261 0.1716 0.2094 REMARK 3 5 3.4600 - 3.2124 0.99 5157 289 0.1925 0.2501 REMARK 3 6 3.2124 - 3.0232 0.98 5073 258 0.2182 0.2692 REMARK 3 7 3.0232 - 2.8720 0.98 5103 312 0.2186 0.2716 REMARK 3 8 2.8720 - 2.7471 0.98 5093 254 0.2307 0.2878 REMARK 3 9 2.7471 - 2.6414 0.93 4837 226 0.2452 0.3093 REMARK 3 10 2.6414 - 2.5503 0.71 3719 206 0.2629 0.3259 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 32.60 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.88650 REMARK 3 B22 (A**2) : 7.02980 REMARK 3 B33 (A**2) : -4.14340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.13460 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.026 6492 REMARK 3 ANGLE : 1.356 8791 REMARK 3 CHIRALITY : 0.260 946 REMARK 3 PLANARITY : 0.002 1106 REMARK 3 DIHEDRAL : 19.687 2463 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -16.4390 4.9208 -6.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: 0.0182 REMARK 3 T33: 0.0603 T12: 0.0013 REMARK 3 T13: 0.0233 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.8448 L22: 0.2761 REMARK 3 L33: 0.7709 L12: 0.0777 REMARK 3 L13: -0.2622 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.1719 S13: -0.0841 REMARK 3 S21: -0.0409 S22: 0.0135 S23: 0.0158 REMARK 3 S31: -0.0349 S32: -0.0682 S33: -0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 28:381 OR RESSEQ REMARK 3 388:398 OR RESSEQ 402:413 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 28:381 OR RESSEQ REMARK 3 388:398 OR RESSEQ 402:413 ) REMARK 3 ATOM PAIRS NUMBER : 3096 REMARK 3 RMSD : 0.034 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2X0F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1290042035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU-MSC SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52047 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 28.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.550 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2X0D REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MM MG FORMATE, 20% PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.82500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 78 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 79 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 81 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 78 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 79 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 81 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 GLN A 3 REMARK 465 LYS A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 ILE A 8 REMARK 465 LEU A 9 REMARK 465 ARG A 10 REMARK 465 ARG A 11 REMARK 465 ASN A 12 REMARK 465 GLU A 13 REMARK 465 TYR A 14 REMARK 465 VAL A 15 REMARK 465 LYS A 16 REMARK 465 ASN A 17 REMARK 465 VAL A 18 REMARK 465 TYR A 19 REMARK 465 LYS A 20 REMARK 465 ASN A 21 REMARK 465 THR A 22 REMARK 465 VAL A 23 REMARK 465 SER A 24 REMARK 465 ASN A 25 REMARK 465 PHE A 26 REMARK 465 ILE A 27 REMARK 465 ASN A 382 REMARK 465 ARG A 383 REMARK 465 ASP A 384 REMARK 465 VAL A 385 REMARK 465 ASP A 386 REMARK 465 LYS A 387 REMARK 465 GLU A 399 REMARK 465 PHE A 400 REMARK 465 ASN A 401 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 GLN B 3 REMARK 465 LYS B 4 REMARK 465 LEU B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 ILE B 8 REMARK 465 LEU B 9 REMARK 465 ARG B 10 REMARK 465 ARG B 11 REMARK 465 ASN B 12 REMARK 465 GLU B 13 REMARK 465 TYR B 14 REMARK 465 VAL B 15 REMARK 465 LYS B 16 REMARK 465 ASN B 17 REMARK 465 VAL B 18 REMARK 465 TYR B 19 REMARK 465 LYS B 20 REMARK 465 ASN B 21 REMARK 465 THR B 22 REMARK 465 VAL B 23 REMARK 465 SER B 24 REMARK 465 ASN B 25 REMARK 465 ASN B 382 REMARK 465 ARG B 383 REMARK 465 ASP B 384 REMARK 465 VAL B 385 REMARK 465 ASP B 386 REMARK 465 LYS B 387 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2P TRH B 415 O HOH B 2113 1.88 REMARK 500 OE1 GLU A 333 O3' TRH A 416 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 232 OD1 ASN B 232 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 40 NE - CZ - NH1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 40 NE - CZ - NH2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 340 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG A 340 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 340 NE - CZ - NH2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG B 40 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 40 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 40 NE - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG B 340 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 340 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 340 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 37 75.40 -107.63 REMARK 500 PHE A 62 -125.07 -134.71 REMARK 500 ASP A 88 -38.33 -132.19 REMARK 500 ASP A 110 59.60 -140.69 REMARK 500 ASP A 112 51.34 -108.09 REMARK 500 PHE A 120 40.12 -143.91 REMARK 500 THR A 139 -87.89 -126.14 REMARK 500 SER A 180 -174.25 178.65 REMARK 500 SER A 202 146.34 86.56 REMARK 500 GLN A 239 79.01 -106.61 REMARK 500 SER A 324 154.07 171.90 REMARK 500 SER A 328 165.09 65.47 REMARK 500 GLU A 347 -115.37 49.00 REMARK 500 GLU A 389 -79.31 -62.42 REMARK 500 PHE A 403 43.59 -109.25 REMARK 500 PHE B 37 74.93 -108.17 REMARK 500 PHE B 62 -124.94 -134.72 REMARK 500 ASP B 88 -38.38 -132.12 REMARK 500 ASP B 110 59.20 -140.99 REMARK 500 ASP B 112 50.90 -108.11 REMARK 500 PHE B 120 39.65 -143.75 REMARK 500 THR B 139 -87.94 -125.20 REMARK 500 SER B 180 -173.50 179.92 REMARK 500 SER B 202 146.19 86.18 REMARK 500 GLN B 239 78.54 -106.51 REMARK 500 SER B 324 153.51 172.54 REMARK 500 SER B 328 164.48 64.02 REMARK 500 GLU B 347 -116.30 49.30 REMARK 500 GLU B 389 -79.31 -62.42 REMARK 500 ASN B 398 -157.99 -124.48 REMARK 500 GLU B 399 -114.12 20.12 REMARK 500 PHE B 400 -165.61 144.62 REMARK 500 PHE B 403 43.69 -108.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRH A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRH B 415 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X0E RELATED DB: PDB REMARK 900 COMPLEX STRUCTURE OF WSAF WITH DTDP REMARK 900 RELATED ID: 2X0D RELATED DB: PDB REMARK 900 APO STRUCTURE OF WSAF DBREF 2X0F A 1 413 UNP Q7BG50 Q7BG50_BACST 1 413 DBREF 2X0F B 1 413 UNP Q7BG50 Q7BG50_BACST 1 413 SEQADV 2X0F ALA A 78 UNP Q7BG50 LYS 78 ENGINEERED MUTATION SEQADV 2X0F ALA A 79 UNP Q7BG50 LYS 79 ENGINEERED MUTATION SEQADV 2X0F ALA A 81 UNP Q7BG50 LYS 81 ENGINEERED MUTATION SEQADV 2X0F ALA B 78 UNP Q7BG50 LYS 78 ENGINEERED MUTATION SEQADV 2X0F ALA B 79 UNP Q7BG50 LYS 79 ENGINEERED MUTATION SEQADV 2X0F ALA B 81 UNP Q7BG50 LYS 81 ENGINEERED MUTATION SEQRES 1 A 413 MET LEU GLN LYS LEU ILE GLN ILE LEU ARG ARG ASN GLU SEQRES 2 A 413 TYR VAL LYS ASN VAL TYR LYS ASN THR VAL SER ASN PHE SEQRES 3 A 413 ILE GLU THR SER ILE PRO GLU ILE THR PRO PHE ASN ALA SEQRES 4 A 413 ARG THR SER SER ILE LYS GLY LYS ARG LEU ASN LEU LEU SEQRES 5 A 413 VAL PRO SER ILE ASN GLN GLU HIS MET PHE GLY GLY ILE SEQRES 6 A 413 SER THR ALA LEU LYS LEU PHE GLU GLN PHE ASP ASN ALA SEQRES 7 A 413 ALA PHE ALA LYS ARG ILE ILE LEU THR ASP ALA THR PRO SEQRES 8 A 413 ASN PRO LYS ASP LEU GLN SER PHE LYS SER PHE LYS TYR SEQRES 9 A 413 VAL MET PRO GLU GLU ASP LYS ASP PHE ALA LEU GLN ILE SEQRES 10 A 413 VAL PRO PHE ASN ASP ARG TYR ASN ARG THR ILE PRO VAL SEQRES 11 A 413 ALA LYS HIS ASP ILE PHE ILE ALA THR ALA TRP TRP THR SEQRES 12 A 413 ALA TYR ALA ALA GLN ARG ILE VAL SER TRP GLN SER ASP SEQRES 13 A 413 THR TYR GLY ILE PRO PRO ASN LYS ILE LEU TYR ILE ILE SEQRES 14 A 413 GLN ASP PHE GLU PRO GLY PHE TYR GLN TRP SER SER GLN SEQRES 15 A 413 TYR VAL LEU ALA GLU SER THR TYR LYS TYR ARG GLY PRO SEQRES 16 A 413 GLN ILE ALA VAL PHE ASN SER GLU LEU LEU LYS GLN TYR SEQRES 17 A 413 PHE ASN ASN LYS GLY TYR ASN PHE THR ASP GLU TYR PHE SEQRES 18 A 413 PHE GLN PRO LYS ILE ASN THR THR LEU LYS ASN TYR ILE SEQRES 19 A 413 ASN ASP LYS ARG GLN LYS GLU LYS ILE ILE LEU VAL TYR SEQRES 20 A 413 GLY ARG PRO SER VAL LYS ARG ASN ALA PHE THR LEU ILE SEQRES 21 A 413 VAL GLU ALA LEU LYS ILE PHE VAL GLN LYS TYR ASP ARG SEQRES 22 A 413 SER ASN GLU TRP LYS ILE ILE SER VAL GLY GLU LYS HIS SEQRES 23 A 413 LYS ASP ILE ALA LEU GLY LYS GLY ILE HIS LEU ASN SER SEQRES 24 A 413 LEU GLY LYS LEU THR LEU GLU ASP TYR ALA ASP LEU LEU SEQRES 25 A 413 LYS ARG SER SER ILE GLY ILE SER LEU MET ILE SER PRO SEQRES 26 A 413 HIS PRO SER TYR PRO PRO LEU GLU MET ALA HIS PHE GLY SEQRES 27 A 413 LEU ARG VAL ILE THR ASN LYS TYR GLU ASN LYS ASP LEU SEQRES 28 A 413 SER ASN TRP HIS SER ASN ILE VAL SER LEU GLU GLN LEU SEQRES 29 A 413 ASN PRO GLU ASN ILE ALA GLU THR LEU VAL GLU LEU CYS SEQRES 30 A 413 MET SER PHE ASN ASN ARG ASP VAL ASP LYS LYS GLU SER SEQRES 31 A 413 SER ASN MET MET PHE TYR ILE ASN GLU PHE ASN GLU PHE SEQRES 32 A 413 SER PHE ILE LYS GLU ILE GLU GLU LYS LEU SEQRES 1 B 413 MET LEU GLN LYS LEU ILE GLN ILE LEU ARG ARG ASN GLU SEQRES 2 B 413 TYR VAL LYS ASN VAL TYR LYS ASN THR VAL SER ASN PHE SEQRES 3 B 413 ILE GLU THR SER ILE PRO GLU ILE THR PRO PHE ASN ALA SEQRES 4 B 413 ARG THR SER SER ILE LYS GLY LYS ARG LEU ASN LEU LEU SEQRES 5 B 413 VAL PRO SER ILE ASN GLN GLU HIS MET PHE GLY GLY ILE SEQRES 6 B 413 SER THR ALA LEU LYS LEU PHE GLU GLN PHE ASP ASN ALA SEQRES 7 B 413 ALA PHE ALA LYS ARG ILE ILE LEU THR ASP ALA THR PRO SEQRES 8 B 413 ASN PRO LYS ASP LEU GLN SER PHE LYS SER PHE LYS TYR SEQRES 9 B 413 VAL MET PRO GLU GLU ASP LYS ASP PHE ALA LEU GLN ILE SEQRES 10 B 413 VAL PRO PHE ASN ASP ARG TYR ASN ARG THR ILE PRO VAL SEQRES 11 B 413 ALA LYS HIS ASP ILE PHE ILE ALA THR ALA TRP TRP THR SEQRES 12 B 413 ALA TYR ALA ALA GLN ARG ILE VAL SER TRP GLN SER ASP SEQRES 13 B 413 THR TYR GLY ILE PRO PRO ASN LYS ILE LEU TYR ILE ILE SEQRES 14 B 413 GLN ASP PHE GLU PRO GLY PHE TYR GLN TRP SER SER GLN SEQRES 15 B 413 TYR VAL LEU ALA GLU SER THR TYR LYS TYR ARG GLY PRO SEQRES 16 B 413 GLN ILE ALA VAL PHE ASN SER GLU LEU LEU LYS GLN TYR SEQRES 17 B 413 PHE ASN ASN LYS GLY TYR ASN PHE THR ASP GLU TYR PHE SEQRES 18 B 413 PHE GLN PRO LYS ILE ASN THR THR LEU LYS ASN TYR ILE SEQRES 19 B 413 ASN ASP LYS ARG GLN LYS GLU LYS ILE ILE LEU VAL TYR SEQRES 20 B 413 GLY ARG PRO SER VAL LYS ARG ASN ALA PHE THR LEU ILE SEQRES 21 B 413 VAL GLU ALA LEU LYS ILE PHE VAL GLN LYS TYR ASP ARG SEQRES 22 B 413 SER ASN GLU TRP LYS ILE ILE SER VAL GLY GLU LYS HIS SEQRES 23 B 413 LYS ASP ILE ALA LEU GLY LYS GLY ILE HIS LEU ASN SER SEQRES 24 B 413 LEU GLY LYS LEU THR LEU GLU ASP TYR ALA ASP LEU LEU SEQRES 25 B 413 LYS ARG SER SER ILE GLY ILE SER LEU MET ILE SER PRO SEQRES 26 B 413 HIS PRO SER TYR PRO PRO LEU GLU MET ALA HIS PHE GLY SEQRES 27 B 413 LEU ARG VAL ILE THR ASN LYS TYR GLU ASN LYS ASP LEU SEQRES 28 B 413 SER ASN TRP HIS SER ASN ILE VAL SER LEU GLU GLN LEU SEQRES 29 B 413 ASN PRO GLU ASN ILE ALA GLU THR LEU VAL GLU LEU CYS SEQRES 30 B 413 MET SER PHE ASN ASN ARG ASP VAL ASP LYS LYS GLU SER SEQRES 31 B 413 SER ASN MET MET PHE TYR ILE ASN GLU PHE ASN GLU PHE SEQRES 32 B 413 SER PHE ILE LYS GLU ILE GLU GLU LYS LEU HET GOL A 414 6 HET GOL A 415 6 HET TRH A 416 35 HET GOL A1415 6 HET GOL B 414 6 HET TRH B 415 35 HETNAM GOL GLYCEROL HETNAM TRH 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 5 TRH 2(C16 H26 N2 O15 P2) FORMUL 9 HOH *215(H2 O) HELIX 1 1 ILE A 31 THR A 35 5 5 HELIX 2 2 ASN A 57 MET A 61 5 5 HELIX 3 3 GLY A 64 PHE A 75 1 12 HELIX 4 4 LYS A 94 LYS A 100 5 7 HELIX 5 5 ALA A 140 TYR A 158 1 19 HELIX 6 6 PHE A 172 TYR A 177 5 6 HELIX 7 7 SER A 180 TYR A 192 1 13 HELIX 8 8 SER A 202 GLY A 213 1 12 HELIX 9 9 ASN A 227 ASN A 232 1 6 HELIX 10 10 VAL A 252 ASN A 255 5 4 HELIX 11 11 ALA A 256 TYR A 271 1 16 HELIX 12 12 ARG A 273 TRP A 277 5 5 HELIX 13 13 THR A 304 SER A 315 1 12 HELIX 14 14 TYR A 329 HIS A 336 1 8 HELIX 15 15 ASP A 350 TRP A 354 5 5 HELIX 16 16 ASN A 365 PHE A 380 1 16 HELIX 17 17 MET A 393 ASN A 398 5 6 HELIX 18 18 PHE A 405 GLU A 411 1 7 HELIX 19 19 ILE B 31 THR B 35 5 5 HELIX 20 20 ASN B 57 MET B 61 5 5 HELIX 21 21 GLY B 64 PHE B 75 1 12 HELIX 22 22 LYS B 94 LYS B 100 5 7 HELIX 23 23 ALA B 140 TYR B 158 1 19 HELIX 24 24 PHE B 172 TYR B 177 5 6 HELIX 25 25 SER B 180 TYR B 192 1 13 HELIX 26 26 SER B 202 GLY B 213 1 12 HELIX 27 27 ASN B 227 ASN B 232 1 6 HELIX 28 28 VAL B 252 ASN B 255 5 4 HELIX 29 29 ALA B 256 TYR B 271 1 16 HELIX 30 30 ARG B 273 TRP B 277 5 5 HELIX 31 31 THR B 304 SER B 315 1 12 HELIX 32 32 TYR B 329 HIS B 336 1 8 HELIX 33 33 ASP B 350 TRP B 354 5 5 HELIX 34 34 ASN B 365 PHE B 380 1 16 HELIX 35 35 MET B 393 ASN B 398 5 6 HELIX 36 36 PHE B 405 GLU B 411 1 7 SHEET 1 AA 2 ALA A 39 THR A 41 0 SHEET 2 AA 2 ILE A 128 VAL A 130 1 O ILE A 128 N ARG A 40 SHEET 1 AB 8 LYS A 103 TYR A 104 0 SHEET 2 AB 8 LEU A 115 PRO A 119 1 O LEU A 115 N LYS A 103 SHEET 3 AB 8 ALA A 81 LEU A 86 1 O LYS A 82 N GLN A 116 SHEET 4 AB 8 ARG A 48 VAL A 53 1 O LEU A 49 N ARG A 83 SHEET 5 AB 8 ASP A 134 ALA A 138 1 O ILE A 135 N ASN A 50 SHEET 6 AB 8 ILE A 165 ILE A 169 1 O LEU A 166 N ALA A 138 SHEET 7 AB 8 GLN A 196 ASN A 201 1 O ILE A 197 N TYR A 167 SHEET 8 AB 8 ASP A 218 PHE A 222 1 O ASP A 218 N ALA A 198 SHEET 1 AC 7 ILE A 289 GLY A 292 0 SHEET 2 AC 7 ILE A 295 SER A 299 -1 O ILE A 295 N LEU A 291 SHEET 3 AC 7 LYS A 278 GLY A 283 1 O ILE A 279 N ASN A 298 SHEET 4 AC 7 ILE A 243 GLY A 248 1 O ILE A 244 N ILE A 280 SHEET 5 AC 7 ILE A 317 ILE A 319 1 O ILE A 317 N LEU A 245 SHEET 6 AC 7 ARG A 340 ASN A 344 1 O ARG A 340 N GLY A 318 SHEET 7 AC 7 ILE A 358 LEU A 361 1 O VAL A 359 N THR A 343 SHEET 1 BA 2 ALA B 39 THR B 41 0 SHEET 2 BA 2 ILE B 128 VAL B 130 1 O ILE B 128 N ARG B 40 SHEET 1 BB 8 LYS B 103 TYR B 104 0 SHEET 2 BB 8 LEU B 115 PRO B 119 1 O LEU B 115 N LYS B 103 SHEET 3 BB 8 ALA B 81 LEU B 86 1 O LYS B 82 N GLN B 116 SHEET 4 BB 8 ARG B 48 VAL B 53 1 O LEU B 49 N ARG B 83 SHEET 5 BB 8 ASP B 134 ALA B 138 1 O ILE B 135 N ASN B 50 SHEET 6 BB 8 ILE B 165 ILE B 169 1 O LEU B 166 N ALA B 138 SHEET 7 BB 8 GLN B 196 ASN B 201 1 O ILE B 197 N TYR B 167 SHEET 8 BB 8 ASP B 218 PHE B 222 1 O ASP B 218 N ALA B 198 SHEET 1 BC 7 ILE B 289 GLY B 292 0 SHEET 2 BC 7 ILE B 295 SER B 299 -1 O ILE B 295 N LEU B 291 SHEET 3 BC 7 LYS B 278 GLY B 283 1 O ILE B 279 N ASN B 298 SHEET 4 BC 7 ILE B 243 GLY B 248 1 O ILE B 244 N ILE B 280 SHEET 5 BC 7 ILE B 317 ILE B 319 1 O ILE B 317 N LEU B 245 SHEET 6 BC 7 ARG B 340 ASN B 344 1 O ARG B 340 N GLY B 318 SHEET 7 BC 7 ILE B 358 LEU B 361 1 O VAL B 359 N THR B 343 SITE 1 AC1 3 TYR A 220 PHE A 221 HOH A2100 SITE 1 AC2 9 PHE A 172 TYR A 183 TYR A 208 LYS A 212 SITE 2 AC2 9 HOH A2087 PHE B 172 TYR B 183 LYS B 212 SITE 3 AC2 9 GOL B 414 SITE 1 AC3 12 GLY A 63 SER A 66 LYS A 225 ASN A 227 SITE 2 AC3 12 LYS A 302 LEU A 303 LEU A 305 TYR A 308 SITE 3 AC3 12 TYR A 329 GLU A 333 HOH A2099 HOH A2101 SITE 1 AC4 8 GLY A 175 PHE A 176 SER A 251 VAL A 252 SITE 2 AC4 8 LYS A 253 ARG A 254 GLN B 178 TRP B 179 SITE 1 AC5 11 GLY A 175 TYR A 177 GLN A 178 TRP A 179 SITE 2 AC5 11 TYR A 183 GOL A 415 GLY B 175 TYR B 177 SITE 3 AC5 11 GLN B 178 TRP B 179 TYR B 183 SITE 1 AC6 12 GLY B 63 LYS B 225 ASN B 227 VAL B 282 SITE 2 AC6 12 LYS B 302 LEU B 303 LEU B 305 TYR B 308 SITE 3 AC6 12 TYR B 329 GLU B 333 HOH B2113 HOH B2114 CRYST1 75.940 75.650 77.480 90.00 102.78 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013168 0.000000 0.002987 0.00000 SCALE2 0.000000 0.013219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013234 0.00000