HEADER CONTRACTILE PROTEIN 03-JAN-10 2X1P TITLE GELSOLIN NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELSOLIN NANOBODY; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_COMMON: LLAMA; SOURCE 4 ORGANISM_TAXID: 9844; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.VAN DEN ABBEELE,S.DECLERCQ,A.DE GANCK,V.DE CORTE,B.VAN LOO, AUTHOR 2 V.SRINIVASAN,J.STEYAERT,J.VAN DE KERCKHOVE,J.GETTEMANS REVDAT 3 20-DEC-23 2X1P 1 REMARK REVDAT 2 06-APR-11 2X1P 1 JRNL REVDAT 1 12-JAN-11 2X1P 0 JRNL AUTH A.VAN DEN ABBEELE,S.DE CLERCQ,A.DE GANCK,V.DE CORTE, JRNL AUTH 2 B.VAN LOO,S.H.SOROR,V.SRINIVASAN,J.STEYAERT, JRNL AUTH 3 J.VANDEKERCKHOVE,J.GETTEMANS JRNL TITL A LLAMA-DERIVED GELSOLIN SINGLE-DOMAIN ANTIBODY BLOCKS JRNL TITL 2 GELSOLIN-G-ACTIN INTERACTION. JRNL REF CELL.MOL.LIFE SCI. V. 67 1519 2010 JRNL REFN ISSN 1420-682X JRNL PMID 20140750 JRNL DOI 10.1007/S00018-010-0266-1 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 204182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10788 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 14785 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 775 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3568 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 789 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.035 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.036 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.021 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.817 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3636 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4916 ; 1.119 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 464 ; 5.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;36.271 ;23.636 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 560 ;10.709 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.103 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 520 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2840 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1750 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2471 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 680 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 123 ; 0.191 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 72 ; 0.182 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2357 ; 0.739 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3664 ; 1.161 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1452 ; 1.674 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1252 ; 2.517 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 126 4 REMARK 3 1 B 3 B 126 4 REMARK 3 1 C 3 C 126 4 REMARK 3 1 D 3 D 126 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 674 ; 0.41 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 674 ; 0.33 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 674 ; 0.39 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 674 ; 0.33 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 674 ; 0.62 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 674 ; 0.59 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 674 ; 0.59 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 674 ; 0.59 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 44.4408 47.8451 26.4587 REMARK 3 T TENSOR REMARK 3 T11: -0.0054 T22: -0.0014 REMARK 3 T33: -0.0054 T12: 0.0017 REMARK 3 T13: 0.0003 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.2458 L22: 0.3786 REMARK 3 L33: 0.2682 L12: -0.1014 REMARK 3 L13: -0.0223 L23: 0.1554 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: 0.0436 S13: -0.0293 REMARK 3 S21: 0.0217 S22: -0.0348 S23: -0.0011 REMARK 3 S31: 0.0207 S32: -0.0262 S33: 0.0222 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 126 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9349 77.5370 12.9631 REMARK 3 T TENSOR REMARK 3 T11: -0.0064 T22: -0.0025 REMARK 3 T33: -0.0082 T12: 0.0001 REMARK 3 T13: 0.0016 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.2780 L22: 0.2864 REMARK 3 L33: 0.3149 L12: 0.1180 REMARK 3 L13: 0.0094 L23: -0.1801 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.0396 S13: -0.0123 REMARK 3 S21: -0.0359 S22: -0.0171 S23: 0.0088 REMARK 3 S31: 0.0211 S32: 0.0207 S33: 0.0097 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 126 REMARK 3 ORIGIN FOR THE GROUP (A): 67.9092 59.7204 27.8620 REMARK 3 T TENSOR REMARK 3 T11: -0.0058 T22: -0.0022 REMARK 3 T33: -0.0088 T12: 0.0003 REMARK 3 T13: -0.0018 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.2767 L22: 0.2813 REMARK 3 L33: 0.3123 L12: -0.1002 REMARK 3 L13: -0.0174 L23: -0.1832 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: 0.0403 S13: 0.0113 REMARK 3 S21: 0.0357 S22: -0.0161 S23: 0.0106 REMARK 3 S31: -0.0214 S32: 0.0204 S33: 0.0088 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 3 D 126 REMARK 3 ORIGIN FOR THE GROUP (A): 72.4147 89.4081 14.3653 REMARK 3 T TENSOR REMARK 3 T11: -0.0049 T22: -0.0015 REMARK 3 T33: -0.0059 T12: -0.0017 REMARK 3 T13: -0.0005 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.2604 L22: 0.3760 REMARK 3 L33: 0.2576 L12: 0.0899 REMARK 3 L13: 0.0173 L23: 0.1543 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: -0.0452 S13: 0.0286 REMARK 3 S21: -0.0222 S22: -0.0335 S23: -0.0025 REMARK 3 S31: -0.0213 S32: -0.0258 S33: 0.0214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2X1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1290042294. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9834 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 204183 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 19.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.19000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HCV REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 1000, 100 MM PHOSPHATE/ REMARK 280 CITRATE PH 4.4, 100 MM LISO4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 VAL A 2 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 ARG A 27 REMARK 465 THR A 28 REMARK 465 PHE A 29 REMARK 465 THR A 30 REMARK 465 SER A 127 REMARK 465 GLN B 1 REMARK 465 VAL B 2 REMARK 465 SER B 25 REMARK 465 GLY B 26 REMARK 465 ARG B 27 REMARK 465 THR B 28 REMARK 465 PHE B 29 REMARK 465 THR B 30 REMARK 465 SER B 127 REMARK 465 GLN C 1 REMARK 465 VAL C 2 REMARK 465 SER C 25 REMARK 465 GLY C 26 REMARK 465 ARG C 27 REMARK 465 THR C 28 REMARK 465 PHE C 29 REMARK 465 THR C 30 REMARK 465 SER C 127 REMARK 465 GLN D 1 REMARK 465 VAL D 2 REMARK 465 SER D 25 REMARK 465 GLY D 26 REMARK 465 ARG D 27 REMARK 465 THR D 28 REMARK 465 PHE D 29 REMARK 465 THR D 30 REMARK 465 SER D 127 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 104 OE2 GLU B 46 1545 1.73 REMARK 500 OE2 GLU C 46 OH TYR D 104 1545 1.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 92 167.41 178.16 REMARK 500 ALA B 92 168.92 179.83 REMARK 500 ALA C 92 168.30 179.02 REMARK 500 ALA D 92 167.47 178.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2009 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH A2010 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A2034 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A2047 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A2048 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH A2104 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B2012 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH B2017 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH B2053 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B2054 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH B2055 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH C2010 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH C2034 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH C2044 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH D2008 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH D2038 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH D2040 DISTANCE = 6.66 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X1Q RELATED DB: PDB REMARK 900 GELSOLIN NANOBODY REMARK 900 RELATED ID: 2X1O RELATED DB: PDB REMARK 900 GELSOLIN NANOBODY DBREF 2X1P A 1 127 PDB 2X1P 2X1P 1 127 DBREF 2X1P B 1 127 PDB 2X1P 2X1P 1 127 DBREF 2X1P C 1 127 PDB 2X1P 2X1P 1 127 DBREF 2X1P D 1 127 PDB 2X1P 2X1P 1 127 SEQRES 1 A 127 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 127 ARG THR PHE THR SER PHE ALA MET GLY TRP PHE ARG GLN SEQRES 4 A 127 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE SER SEQRES 5 A 127 ARG SER GLY THR LEU THR ARG TYR ALA ASP SER ALA LYS SEQRES 6 A 127 GLY ARG PHE THR ILE SER VAL ASP ASN ALA LYS ASN THR SEQRES 7 A 127 VAL SER LEU GLN MET ASP ASN LEU ASN PRO ASP ASP THR SEQRES 8 A 127 ALA VAL TYR TYR CYS ALA ALA ASP LEU HIS ARG PRO TYR SEQRES 9 A 127 GLY PRO GLY THR GLN ARG SER ASP GLU TYR ASP SER TRP SEQRES 10 A 127 GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 B 127 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 127 ARG THR PHE THR SER PHE ALA MET GLY TRP PHE ARG GLN SEQRES 4 B 127 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE SER SEQRES 5 B 127 ARG SER GLY THR LEU THR ARG TYR ALA ASP SER ALA LYS SEQRES 6 B 127 GLY ARG PHE THR ILE SER VAL ASP ASN ALA LYS ASN THR SEQRES 7 B 127 VAL SER LEU GLN MET ASP ASN LEU ASN PRO ASP ASP THR SEQRES 8 B 127 ALA VAL TYR TYR CYS ALA ALA ASP LEU HIS ARG PRO TYR SEQRES 9 B 127 GLY PRO GLY THR GLN ARG SER ASP GLU TYR ASP SER TRP SEQRES 10 B 127 GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 C 127 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 127 ARG THR PHE THR SER PHE ALA MET GLY TRP PHE ARG GLN SEQRES 4 C 127 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE SER SEQRES 5 C 127 ARG SER GLY THR LEU THR ARG TYR ALA ASP SER ALA LYS SEQRES 6 C 127 GLY ARG PHE THR ILE SER VAL ASP ASN ALA LYS ASN THR SEQRES 7 C 127 VAL SER LEU GLN MET ASP ASN LEU ASN PRO ASP ASP THR SEQRES 8 C 127 ALA VAL TYR TYR CYS ALA ALA ASP LEU HIS ARG PRO TYR SEQRES 9 C 127 GLY PRO GLY THR GLN ARG SER ASP GLU TYR ASP SER TRP SEQRES 10 C 127 GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 D 127 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 127 ARG THR PHE THR SER PHE ALA MET GLY TRP PHE ARG GLN SEQRES 4 D 127 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE SER SEQRES 5 D 127 ARG SER GLY THR LEU THR ARG TYR ALA ASP SER ALA LYS SEQRES 6 D 127 GLY ARG PHE THR ILE SER VAL ASP ASN ALA LYS ASN THR SEQRES 7 D 127 VAL SER LEU GLN MET ASP ASN LEU ASN PRO ASP ASP THR SEQRES 8 D 127 ALA VAL TYR TYR CYS ALA ALA ASP LEU HIS ARG PRO TYR SEQRES 9 D 127 GLY PRO GLY THR GLN ARG SER ASP GLU TYR ASP SER TRP SEQRES 10 D 127 GLY GLN GLY THR GLN VAL THR VAL SER SER FORMUL 5 HOH *789(H2 O) HELIX 1 1 ASN A 87 THR A 91 5 5 HELIX 2 2 ARG A 110 TYR A 114 5 5 HELIX 3 3 ASN B 87 THR B 91 5 5 HELIX 4 4 ARG B 110 TYR B 114 5 5 HELIX 5 5 ASN C 87 THR C 91 5 5 HELIX 6 6 ARG C 110 TYR C 114 5 5 HELIX 7 7 ASN D 87 THR D 91 5 5 HELIX 8 8 ARG D 110 TYR D 114 5 5 SHEET 1 AA 4 GLN A 5 GLY A 8 0 SHEET 2 AA 4 LEU A 18 ALA A 23 -1 O SER A 21 N SER A 7 SHEET 3 AA 4 THR A 78 MET A 83 -1 O VAL A 79 N CYS A 22 SHEET 4 AA 4 PHE A 68 ASP A 73 -1 O THR A 69 N GLN A 82 SHEET 1 AB 4 GLY A 10 GLN A 13 0 SHEET 2 AB 4 THR A 121 SER A 126 1 O GLN A 122 N GLY A 10 SHEET 3 AB 4 ALA A 92 ASP A 99 -1 O ALA A 92 N VAL A 123 SHEET 4 AB 4 SER A 116 TRP A 117 -1 O SER A 116 N ALA A 98 SHEET 1 AC 6 GLY A 10 GLN A 13 0 SHEET 2 AC 6 THR A 121 SER A 126 1 O GLN A 122 N GLY A 10 SHEET 3 AC 6 ALA A 92 ASP A 99 -1 O ALA A 92 N VAL A 123 SHEET 4 AC 6 ALA A 33 GLN A 39 -1 O ALA A 33 N ASP A 99 SHEET 5 AC 6 GLU A 46 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AC 6 THR A 58 TYR A 60 -1 O ARG A 59 N SER A 50 SHEET 1 AD 2 SER A 116 TRP A 117 0 SHEET 2 AD 2 ALA A 92 ASP A 99 -1 O ALA A 98 N SER A 116 SHEET 1 BA 4 GLN B 5 SER B 7 0 SHEET 2 BA 4 LEU B 18 ALA B 23 -1 O SER B 21 N SER B 7 SHEET 3 BA 4 THR B 78 MET B 83 -1 O VAL B 79 N CYS B 22 SHEET 4 BA 4 PHE B 68 ASP B 73 -1 O THR B 69 N GLN B 82 SHEET 1 BB 4 GLY B 10 GLN B 13 0 SHEET 2 BB 4 THR B 121 SER B 126 1 O GLN B 122 N GLY B 10 SHEET 3 BB 4 ALA B 92 ASP B 99 -1 O ALA B 92 N VAL B 123 SHEET 4 BB 4 SER B 116 TRP B 117 -1 O SER B 116 N ALA B 98 SHEET 1 BC 6 GLY B 10 GLN B 13 0 SHEET 2 BC 6 THR B 121 SER B 126 1 O GLN B 122 N GLY B 10 SHEET 3 BC 6 ALA B 92 ASP B 99 -1 O ALA B 92 N VAL B 123 SHEET 4 BC 6 ALA B 33 GLN B 39 -1 O ALA B 33 N ASP B 99 SHEET 5 BC 6 GLU B 46 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 BC 6 THR B 58 TYR B 60 -1 O ARG B 59 N SER B 50 SHEET 1 BD 2 SER B 116 TRP B 117 0 SHEET 2 BD 2 ALA B 92 ASP B 99 -1 O ALA B 98 N SER B 116 SHEET 1 CA 4 GLN C 5 SER C 7 0 SHEET 2 CA 4 LEU C 18 ALA C 23 -1 O SER C 21 N SER C 7 SHEET 3 CA 4 THR C 78 MET C 83 -1 O VAL C 79 N CYS C 22 SHEET 4 CA 4 PHE C 68 ASP C 73 -1 O THR C 69 N GLN C 82 SHEET 1 CB 4 GLY C 10 GLN C 13 0 SHEET 2 CB 4 THR C 121 SER C 126 1 O GLN C 122 N GLY C 10 SHEET 3 CB 4 ALA C 92 ASP C 99 -1 O ALA C 92 N VAL C 123 SHEET 4 CB 4 SER C 116 TRP C 117 -1 O SER C 116 N ALA C 98 SHEET 1 CC 6 GLY C 10 GLN C 13 0 SHEET 2 CC 6 THR C 121 SER C 126 1 O GLN C 122 N GLY C 10 SHEET 3 CC 6 ALA C 92 ASP C 99 -1 O ALA C 92 N VAL C 123 SHEET 4 CC 6 ALA C 33 GLN C 39 -1 O ALA C 33 N ASP C 99 SHEET 5 CC 6 GLU C 46 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 CC 6 THR C 58 TYR C 60 -1 O ARG C 59 N SER C 50 SHEET 1 CD 2 SER C 116 TRP C 117 0 SHEET 2 CD 2 ALA C 92 ASP C 99 -1 O ALA C 98 N SER C 116 SHEET 1 DA 4 GLN D 5 GLY D 8 0 SHEET 2 DA 4 LEU D 18 ALA D 23 -1 O SER D 21 N SER D 7 SHEET 3 DA 4 THR D 78 MET D 83 -1 O VAL D 79 N CYS D 22 SHEET 4 DA 4 PHE D 68 ASP D 73 -1 O THR D 69 N GLN D 82 SHEET 1 DB 4 GLY D 10 GLN D 13 0 SHEET 2 DB 4 THR D 121 SER D 126 1 O GLN D 122 N GLY D 10 SHEET 3 DB 4 ALA D 92 ASP D 99 -1 O ALA D 92 N VAL D 123 SHEET 4 DB 4 SER D 116 TRP D 117 -1 O SER D 116 N ALA D 98 SHEET 1 DC 6 GLY D 10 GLN D 13 0 SHEET 2 DC 6 THR D 121 SER D 126 1 O GLN D 122 N GLY D 10 SHEET 3 DC 6 ALA D 92 ASP D 99 -1 O ALA D 92 N VAL D 123 SHEET 4 DC 6 ALA D 33 GLN D 39 -1 O ALA D 33 N ASP D 99 SHEET 5 DC 6 GLU D 46 ILE D 51 -1 O GLU D 46 N ARG D 38 SHEET 6 DC 6 THR D 58 TYR D 60 -1 O ARG D 59 N SER D 50 SHEET 1 DD 2 SER D 116 TRP D 117 0 SHEET 2 DD 2 ALA D 92 ASP D 99 -1 O ALA D 98 N SER D 116 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.05 SSBOND 2 CYS B 22 CYS B 96 1555 1555 2.04 SSBOND 3 CYS C 22 CYS C 96 1555 1555 2.04 SSBOND 4 CYS D 22 CYS D 96 1555 1555 2.05 CRYST1 55.948 59.342 81.651 90.00 90.01 90.00 P 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017874 0.000000 0.000003 0.00000 SCALE2 0.000000 0.016851 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012247 0.00000