HEADER TRANSPORT PROTEIN 11-JAN-10 2X26 TITLE CRYSTAL STRUCTURE OF THE PERIPLASMIC ALIPHATIC SULPHONATE BINDING TITLE 2 PROTEIN SSUA FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC ALIPHATIC SULPHONATES-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 25-319; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: C-TERMINAL EXTENSION AFTER THE MATURE PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 ATCC: 700926; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: GFPD KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.BEALE,S.LEE,S.IWATA,K.BEIS REVDAT 5 20-DEC-23 2X26 1 REMARK REVDAT 4 06-MAR-19 2X26 1 REMARK REVDAT 3 13-JUL-11 2X26 1 VERSN REVDAT 2 21-APR-10 2X26 1 JRNL REVDAT 1 14-APR-10 2X26 0 JRNL AUTH J.BEALE,S.Y.LEE,S.IWATA,K.BEIS JRNL TITL STRUCTURE OF THE ALIPHATIC SULFONATE-BINDING PROTEIN SSUA JRNL TITL 2 FROM ESCHERICHIA COLI JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 66 391 2010 JRNL REFN ESSN 1744-3091 JRNL PMID 20383006 JRNL DOI 10.1107/S1744309110006226 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0106 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 54060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2889 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3953 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4628 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 426 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 22.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.671 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4985 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6821 ; 1.619 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 662 ; 5.513 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 229 ;37.923 ;24.672 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 850 ;14.129 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;15.510 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 758 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3853 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3100 ; 0.909 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5020 ; 1.555 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1885 ; 2.613 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1768 ; 4.248 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 106 REMARK 3 RESIDUE RANGE : A 210 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4450 101.5960 6.0500 REMARK 3 T TENSOR REMARK 3 T11: 0.0475 T22: 0.0961 REMARK 3 T33: 0.1039 T12: -0.0027 REMARK 3 T13: 0.0206 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.9986 L22: 0.9434 REMARK 3 L33: 1.3818 L12: 0.1338 REMARK 3 L13: -0.5156 L23: -0.4652 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: -0.1257 S13: 0.1893 REMARK 3 S21: 0.0484 S22: -0.0517 S23: 0.0164 REMARK 3 S31: -0.0413 S32: 0.1602 S33: -0.0686 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6650 79.0990 7.1690 REMARK 3 T TENSOR REMARK 3 T11: 0.3553 T22: 0.0836 REMARK 3 T33: 0.0744 T12: 0.0046 REMARK 3 T13: 0.0200 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.8199 L22: 2.3691 REMARK 3 L33: 1.9128 L12: 0.3849 REMARK 3 L13: -0.8834 L23: 0.3457 REMARK 3 S TENSOR REMARK 3 S11: -0.0859 S12: 0.0024 S13: 0.0361 REMARK 3 S21: -0.1766 S22: -0.0574 S23: 0.0435 REMARK 3 S31: 0.5513 S32: -0.0436 S33: 0.1433 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 106 REMARK 3 RESIDUE RANGE : B 210 B 310 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7660 98.6830 -28.1240 REMARK 3 T TENSOR REMARK 3 T11: 0.0604 T22: 0.0858 REMARK 3 T33: 0.0759 T12: 0.0027 REMARK 3 T13: 0.0228 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.6248 L22: 0.8293 REMARK 3 L33: 2.1248 L12: 0.2505 REMARK 3 L13: -0.1871 L23: -0.7103 REMARK 3 S TENSOR REMARK 3 S11: -0.0686 S12: 0.0524 S13: -0.2437 REMARK 3 S21: -0.0684 S22: -0.0233 S23: -0.1030 REMARK 3 S31: 0.1258 S32: 0.1722 S33: 0.0919 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 107 B 209 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9480 120.0290 -35.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.3512 T22: 0.0420 REMARK 3 T33: 0.0049 T12: -0.0531 REMARK 3 T13: -0.0475 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 2.4279 L22: 2.5460 REMARK 3 L33: 4.1331 L12: -0.1659 REMARK 3 L13: 0.4393 L23: -1.1035 REMARK 3 S TENSOR REMARK 3 S11: -0.2473 S12: -0.0398 S13: 0.1850 REMARK 3 S21: 0.1580 S22: 0.1075 S23: -0.0434 REMARK 3 S31: -0.9654 S32: 0.1359 S33: 0.1398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES RESIDUAL ONLY. RESIDUES 320 TO 332 BELONG TO REMARK 3 THE C-TERMINAL EXTENSION FROM THE CLONING VECTOR. THERE IS STILL REMARK 3 SOME POSITIVE DENSITY OBSERVED AROUND RESIDUES B328-332. THIS IS REMARK 3 BECAUSE WE HAVE MODELLED AND REFINED WITH 0.5 OCCUPANCY DUE TO REMARK 3 CONFORMATION CHANGES. REMARK 4 REMARK 4 2X26 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1290042401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57014 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 71.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES, MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3E4R REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG3350, 0.2M SODIUM FORMATE AT REMARK 280 293K IN 2 DAYS, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.44550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.20050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.01300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.20050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.44550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.01300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 311 REMARK 465 THR B 312 REMARK 465 GLN B 313 REMARK 465 LEU B 314 REMARK 465 GLU B 315 REMARK 465 GLY B 316 REMARK 465 LYS B 317 REMARK 465 GLN B 318 REMARK 465 LEU B 319 REMARK 465 GLU B 320 REMARK 465 PHE B 321 REMARK 465 ARG B 322 REMARK 465 VAL B 323 REMARK 465 PRO B 324 REMARK 465 GLY B 325 REMARK 465 ASN B 326 REMARK 465 GLU B 327 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG GLN A 159 O HOH A 2128 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 269 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 146 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG B 269 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 97 30.30 -93.86 REMARK 500 ASN A 206 68.12 36.62 REMARK 500 GLU A 327 133.88 -32.51 REMARK 500 TYR A 330 -53.94 64.54 REMARK 500 PHE A 331 117.69 -161.41 REMARK 500 ASP B 201 -166.44 -119.68 REMARK 500 TYR B 330 -55.82 68.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1333 DBREF 2X26 A 25 319 UNP P75853 SSUA_ECOLI 25 319 DBREF 2X26 A 320 332 PDB 2X26 2X26 320 332 DBREF 2X26 B 25 319 UNP P75853 SSUA_ECOLI 25 319 DBREF 2X26 B 320 332 PDB 2X26 2X26 320 332 SEQRES 1 A 308 SER PRO GLU ALA LEU ARG ILE GLY TYR GLN LYS GLY SER SEQRES 2 A 308 ILE GLY MET VAL LEU ALA LYS SER HIS GLN LEU LEU GLU SEQRES 3 A 308 LYS ARG TYR PRO GLU SER LYS ILE SER TRP VAL GLU PHE SEQRES 4 A 308 PRO ALA GLY PRO GLN MET LEU GLU ALA LEU ASN VAL GLY SEQRES 5 A 308 SER ILE ASP LEU GLY SER THR GLY ASP ILE PRO PRO ILE SEQRES 6 A 308 PHE ALA GLN ALA ALA GLY ALA ASP LEU VAL TYR VAL GLY SEQRES 7 A 308 VAL GLU PRO PRO LYS PRO LYS ALA GLU VAL ILE LEU VAL SEQRES 8 A 308 ALA GLU ASN SER PRO ILE LYS THR VAL ALA ASP LEU LYS SEQRES 9 A 308 GLY HIS LYS VAL ALA PHE GLN LYS GLY SER SER SER HIS SEQRES 10 A 308 ASN LEU LEU LEU ARG ALA LEU ARG GLN ALA GLY LEU LYS SEQRES 11 A 308 PHE THR ASP ILE GLN PRO THR TYR LEU THR PRO ALA ASP SEQRES 12 A 308 ALA ARG ALA ALA PHE GLN GLN GLY ASN VAL ASP ALA TRP SEQRES 13 A 308 ALA ILE TRP ASP PRO TYR TYR SER ALA ALA LEU LEU GLN SEQRES 14 A 308 GLY GLY VAL ARG VAL LEU LYS ASP GLY THR ASP LEU ASN SEQRES 15 A 308 GLN THR GLY SER PHE TYR LEU ALA ALA ARG PRO TYR ALA SEQRES 16 A 308 GLU LYS ASN GLY ALA PHE ILE GLN GLY VAL LEU ALA THR SEQRES 17 A 308 PHE SER GLU ALA ASP ALA LEU THR ARG SER GLN ARG GLU SEQRES 18 A 308 GLN SER ILE ALA LEU LEU ALA LYS THR MET GLY LEU PRO SEQRES 19 A 308 ALA PRO VAL ILE ALA SER TYR LEU ASP HIS ARG PRO PRO SEQRES 20 A 308 THR THR ILE LYS PRO VAL ASN ALA GLU VAL ALA ALA LEU SEQRES 21 A 308 GLN GLN GLN THR ALA ASP LEU PHE TYR GLU ASN ARG LEU SEQRES 22 A 308 VAL PRO LYS LYS VAL ASP ILE ARG GLN ARG ILE TRP GLN SEQRES 23 A 308 PRO THR GLN LEU GLU GLY LYS GLN LEU GLU PHE ARG VAL SEQRES 24 A 308 PRO GLY ASN GLU ASN LEU TYR PHE GLN SEQRES 1 B 308 SER PRO GLU ALA LEU ARG ILE GLY TYR GLN LYS GLY SER SEQRES 2 B 308 ILE GLY MET VAL LEU ALA LYS SER HIS GLN LEU LEU GLU SEQRES 3 B 308 LYS ARG TYR PRO GLU SER LYS ILE SER TRP VAL GLU PHE SEQRES 4 B 308 PRO ALA GLY PRO GLN MET LEU GLU ALA LEU ASN VAL GLY SEQRES 5 B 308 SER ILE ASP LEU GLY SER THR GLY ASP ILE PRO PRO ILE SEQRES 6 B 308 PHE ALA GLN ALA ALA GLY ALA ASP LEU VAL TYR VAL GLY SEQRES 7 B 308 VAL GLU PRO PRO LYS PRO LYS ALA GLU VAL ILE LEU VAL SEQRES 8 B 308 ALA GLU ASN SER PRO ILE LYS THR VAL ALA ASP LEU LYS SEQRES 9 B 308 GLY HIS LYS VAL ALA PHE GLN LYS GLY SER SER SER HIS SEQRES 10 B 308 ASN LEU LEU LEU ARG ALA LEU ARG GLN ALA GLY LEU LYS SEQRES 11 B 308 PHE THR ASP ILE GLN PRO THR TYR LEU THR PRO ALA ASP SEQRES 12 B 308 ALA ARG ALA ALA PHE GLN GLN GLY ASN VAL ASP ALA TRP SEQRES 13 B 308 ALA ILE TRP ASP PRO TYR TYR SER ALA ALA LEU LEU GLN SEQRES 14 B 308 GLY GLY VAL ARG VAL LEU LYS ASP GLY THR ASP LEU ASN SEQRES 15 B 308 GLN THR GLY SER PHE TYR LEU ALA ALA ARG PRO TYR ALA SEQRES 16 B 308 GLU LYS ASN GLY ALA PHE ILE GLN GLY VAL LEU ALA THR SEQRES 17 B 308 PHE SER GLU ALA ASP ALA LEU THR ARG SER GLN ARG GLU SEQRES 18 B 308 GLN SER ILE ALA LEU LEU ALA LYS THR MET GLY LEU PRO SEQRES 19 B 308 ALA PRO VAL ILE ALA SER TYR LEU ASP HIS ARG PRO PRO SEQRES 20 B 308 THR THR ILE LYS PRO VAL ASN ALA GLU VAL ALA ALA LEU SEQRES 21 B 308 GLN GLN GLN THR ALA ASP LEU PHE TYR GLU ASN ARG LEU SEQRES 22 B 308 VAL PRO LYS LYS VAL ASP ILE ARG GLN ARG ILE TRP GLN SEQRES 23 B 308 PRO THR GLN LEU GLU GLY LYS GLN LEU GLU PHE ARG VAL SEQRES 24 B 308 PRO GLY ASN GLU ASN LEU TYR PHE GLN HET GOL A1333 6 HET GOL B1333 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *426(H2 O) HELIX 1 1 SER A 37 HIS A 46 1 10 HELIX 2 2 GLN A 47 TYR A 53 1 7 HELIX 3 3 ALA A 65 GLY A 76 1 12 HELIX 4 4 ASP A 85 ALA A 94 1 10 HELIX 5 5 LYS A 107 LYS A 109 5 3 HELIX 6 6 THR A 123 LYS A 128 5 6 HELIX 7 7 SER A 138 ALA A 151 1 14 HELIX 8 8 LYS A 154 ILE A 158 5 5 HELIX 9 9 THR A 164 GLN A 174 1 11 HELIX 10 10 PRO A 185 GLY A 194 1 10 HELIX 11 11 ARG A 216 ASN A 222 1 7 HELIX 12 12 ASN A 222 GLY A 256 1 35 HELIX 13 13 PRO A 258 HIS A 268 1 11 HELIX 14 14 ASN A 278 ASN A 295 1 18 HELIX 15 15 ASP A 303 ARG A 307 5 5 HELIX 16 16 SER B 37 HIS B 46 1 10 HELIX 17 17 GLN B 47 TYR B 53 1 7 HELIX 18 18 ALA B 65 VAL B 75 1 11 HELIX 19 19 ASP B 85 ALA B 94 1 10 HELIX 20 20 LYS B 107 LYS B 109 5 3 HELIX 21 21 THR B 123 LYS B 128 5 6 HELIX 22 22 SER B 138 GLY B 152 1 15 HELIX 23 23 LYS B 154 ILE B 158 5 5 HELIX 24 24 THR B 164 GLN B 174 1 11 HELIX 25 25 PRO B 185 GLY B 194 1 10 HELIX 26 26 THR B 203 ASN B 206 5 4 HELIX 27 27 ARG B 216 ASN B 222 1 7 HELIX 28 28 ASN B 222 GLY B 256 1 35 HELIX 29 29 PRO B 258 HIS B 268 1 11 HELIX 30 30 ASN B 278 ASN B 295 1 18 HELIX 31 31 ASP B 303 ARG B 307 5 5 SHEET 1 AA 5 LYS A 57 GLU A 62 0 SHEET 2 AA 5 ALA A 28 TYR A 33 1 O LEU A 29 N SER A 59 SHEET 3 AA 5 LEU A 80 THR A 83 1 O LEU A 80 N GLY A 32 SHEET 4 AA 5 SER A 210 ALA A 215 -1 O PHE A 211 N THR A 83 SHEET 5 AA 5 LEU A 98 GLU A 104 -1 O VAL A 99 N ALA A 214 SHEET 1 AB 5 GLN A 159 TYR A 162 0 SHEET 2 AB 5 LYS A 131 PHE A 134 1 O VAL A 132 N THR A 161 SHEET 3 AB 5 ALA A 179 TRP A 183 1 O ALA A 179 N ALA A 133 SHEET 4 AB 5 GLU A 111 ALA A 116 -1 O VAL A 112 N ILE A 182 SHEET 5 AB 5 VAL A 196 ASP A 201 -1 O ARG A 197 N VAL A 115 SHEET 1 BA 5 LYS B 57 GLU B 62 0 SHEET 2 BA 5 ALA B 28 TYR B 33 1 O LEU B 29 N SER B 59 SHEET 3 BA 5 LEU B 80 THR B 83 1 O LEU B 80 N GLY B 32 SHEET 4 BA 5 PHE B 211 ALA B 215 -1 O PHE B 211 N THR B 83 SHEET 5 BA 5 LEU B 98 VAL B 103 -1 O VAL B 99 N ALA B 214 SHEET 1 BB 5 GLN B 159 TYR B 162 0 SHEET 2 BB 5 LYS B 131 PHE B 134 1 O VAL B 132 N THR B 161 SHEET 3 BB 5 ALA B 179 TRP B 183 1 O ALA B 179 N ALA B 133 SHEET 4 BB 5 GLU B 111 ALA B 116 -1 O VAL B 112 N ILE B 182 SHEET 5 BB 5 VAL B 196 ASP B 201 -1 O ARG B 197 N VAL B 115 CISPEP 1 ASP A 184 PRO A 185 0 11.88 CISPEP 2 ASP B 184 PRO B 185 0 6.57 SITE 1 AC1 11 GLY B 36 SER B 37 ILE B 38 GLU B 104 SITE 2 AC1 11 LYS B 107 SER B 210 ARG B 269 PHE B 331 SITE 3 AC1 11 HOH B2122 HOH B2146 HOH B2170 SITE 1 AC2 8 GLY A 36 SER A 37 ILE A 38 GLU A 104 SITE 2 AC2 8 LYS A 107 ARG A 269 HOH A2167 HOH A2256 CRYST1 40.891 96.026 142.401 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007022 0.00000