HEADER HYDROLASE 22-JAN-10 2X3A TITLE ASAP1 INACTIVE MUTANT E294Q, AN EXTRACELLULAR TOXIC ZINC TITLE 2 METALLOENDOPEPTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIC EXTRACELLULAR ENDOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.24.39; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROMONAS SALMONICIDA SUBSP. ACHROMOGENES; SOURCE 3 ORGANISM_TAXID: 113288; SOURCE 4 STRAIN: KELDUR265-87; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PRI3715; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PJOE E3075 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.BOGDANOVIC,G.J.PALM,R.K.SINGH,W.HINRICHS REVDAT 6 13-NOV-24 2X3A 1 REMARK REVDAT 5 20-DEC-23 2X3A 1 REMARK LINK REVDAT 4 24-JUL-19 2X3A 1 REMARK REVDAT 3 12-OCT-16 2X3A 1 JRNL REVDAT 2 21-SEP-16 2X3A 1 JRNL REMARK VERSN HETSYN REVDAT 1 02-FEB-11 2X3A 0 JRNL AUTH X.BOGDANOVIC,G.J.PALM,J.SCHWENTEIT,R.K.SINGH, JRNL AUTH 2 B.K.GUDMUNDSDOTTIR,W.HINRICHS JRNL TITL STRUCTURAL EVIDENCE OF INTRAMOLECULAR PROPEPTIDE INHIBITION JRNL TITL 2 OF THE ASPZINCIN METALLOENDOPEPTIDASE ASAP1. JRNL REF FEBS LETT. V. 590 3280 2016 JRNL REFN ISSN 0014-5793 JRNL PMID 27528449 JRNL DOI 10.1002/1873-3468.12356 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.BOGDANOVIC,R.K.SINGH,J.HENTSCHKE,B.K.GUDMUNDSDOTTIR, REMARK 1 AUTH 2 W.HINRICHS REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF REMARK 1 TITL 2 ASAP1_E294A AND ASAP1_E294Q, TWO INACTIVE MUTANTS OF THE REMARK 1 TITL 3 TOXIC ZINC METALLOPEPTIDASE ASAP1 FROM AEROMONAS SALMONICIDA REMARK 1 TITL 4 SUBSP. ACHROMOGENES. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 695 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19574642 REMARK 1 DOI 10.1107/S1744309109020132 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.ARNADOTTIR,I.HVANNDAL,V.ANDRESDOTTIR,S.E.BURR,J.FREY, REMARK 1 AUTH 2 B.K.GUDMUNDSDOTTIR REMARK 1 TITL THE ASAP1 PEPTIDASE OF AEROMONAS SALMONICIDA SUBSP. REMARK 1 TITL 2 ACHROMOGENES IS A HIGHLY CONSERVED DEUTEROLYSIN REMARK 1 TITL 3 METALLOPROTEASE (FAMILY M35) AND A MAJOR VIRULENCE FACTOR. REMARK 1 REF J.BACTERIOL. V. 191 403 2009 REMARK 1 REFN ISSN 0021-9193 REMARK 1 PMID 18952802 REMARK 1 DOI 10.1128/JB.00847-08 REMARK 1 REFERENCE 3 REMARK 1 AUTH B.K.GUDMUNDSDOTTIR,S.HASTINGST,E.A.ELLIS REMARK 1 TITL ISOLATION OF A NEW TOXIC PROTEASE FROM A STRAIN OF AEROMONAS REMARK 1 TITL 2 SALMONICIDA SUBSPECIES ACHROMOGENES REMARK 1 REF DIS.AQUAT.ORGAN. V. 9 199 1990 REMARK 1 REFN ISSN 0177-5103 REMARK 1 DOI 10.3354/DAO009199 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 23411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1258 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1632 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2253 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.21000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : 0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.82000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.686 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2370 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3227 ; 1.928 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 297 ; 6.941 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;37.029 ;24.732 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;15.662 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;12.987 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 351 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1819 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1474 ; 1.104 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2361 ; 1.856 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 896 ; 3.195 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 865 ; 4.782 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8100 55.7289 30.2605 REMARK 3 T TENSOR REMARK 3 T11: 0.0914 T22: 0.0671 REMARK 3 T33: 0.0477 T12: -0.0612 REMARK 3 T13: 0.0182 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 1.3279 L22: 1.8945 REMARK 3 L33: 0.1005 L12: 1.2519 REMARK 3 L13: -0.1028 L23: -0.3502 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: -0.0350 S13: -0.0464 REMARK 3 S21: 0.0468 S22: 0.0005 S23: -0.0871 REMARK 3 S31: -0.0093 S32: -0.0222 S33: 0.0262 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3866 62.1532 24.7162 REMARK 3 T TENSOR REMARK 3 T11: 0.0776 T22: 0.0790 REMARK 3 T33: 0.0271 T12: -0.0105 REMARK 3 T13: -0.0043 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.7455 L22: 0.7913 REMARK 3 L33: 0.6832 L12: 1.1725 REMARK 3 L13: -0.5003 L23: -0.3627 REMARK 3 S TENSOR REMARK 3 S11: -0.0852 S12: 0.1689 S13: -0.1559 REMARK 3 S21: -0.0451 S22: 0.1228 S23: -0.1019 REMARK 3 S31: 0.0658 S32: -0.2285 S33: -0.0376 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6463 66.4613 36.0543 REMARK 3 T TENSOR REMARK 3 T11: 0.0756 T22: 0.0709 REMARK 3 T33: 0.0632 T12: -0.0125 REMARK 3 T13: -0.0153 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.8555 L22: 2.0649 REMARK 3 L33: 2.4837 L12: 1.4275 REMARK 3 L13: -0.5338 L23: 0.8188 REMARK 3 S TENSOR REMARK 3 S11: 0.0670 S12: -0.0248 S13: -0.0481 REMARK 3 S21: 0.0579 S22: -0.0473 S23: 0.0686 REMARK 3 S31: 0.0377 S32: -0.1437 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 175 A 304 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8510 74.9770 10.5118 REMARK 3 T TENSOR REMARK 3 T11: 0.0619 T22: 0.0306 REMARK 3 T33: 0.0266 T12: 0.0017 REMARK 3 T13: -0.0254 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.6017 L22: 1.0715 REMARK 3 L33: 1.1159 L12: -0.0855 REMARK 3 L13: -0.0982 L23: 0.0886 REMARK 3 S TENSOR REMARK 3 S11: -0.0407 S12: 0.1333 S13: -0.0204 REMARK 3 S21: -0.0960 S22: 0.0356 S23: 0.1567 REMARK 3 S31: -0.0861 S32: -0.1155 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 305 A 340 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7436 71.1299 9.6438 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.1348 REMARK 3 T33: 0.2809 T12: -0.0594 REMARK 3 T13: -0.0459 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 8.0463 L22: 3.2137 REMARK 3 L33: 2.7786 L12: -1.9723 REMARK 3 L13: -1.6567 L23: -1.0710 REMARK 3 S TENSOR REMARK 3 S11: -0.2155 S12: 0.2542 S13: -0.7202 REMARK 3 S21: -0.1387 S22: 0.0530 S23: 0.7015 REMARK 3 S31: 0.3279 S32: -0.4359 S33: 0.1625 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2X3A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1290042337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24682 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2X3C REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MES PH 7.5, 1.6 M (NH4)2SO4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.12450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.23400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.12450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.23400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -152.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 77.44745 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 50.59361 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 294 TO GLN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 LYS A 3 REMARK 465 VAL A 4 REMARK 465 THR A 5 REMARK 465 PRO A 6 REMARK 465 ILE A 7 REMARK 465 ALA A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 GLY A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 ALA A 16 REMARK 465 SER A 17 REMARK 465 PRO A 18 REMARK 465 LEU A 19 REMARK 465 CYS A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 ARG A 131 REMARK 465 LYS A 132 REMARK 465 ARG A 133 REMARK 465 PRO A 134 REMARK 465 ARG A 135 REMARK 465 ALA A 136 REMARK 465 LYS A 137 REMARK 465 GLN A 138 REMARK 465 ALA A 139 REMARK 465 GLN A 140 REMARK 465 ALA A 141 REMARK 465 ALA A 161 REMARK 465 LYS A 162 REMARK 465 VAL A 163 REMARK 465 ALA A 164 REMARK 465 ALA A 165 REMARK 465 ALA A 166 REMARK 465 GLU A 167 REMARK 465 PRO A 168 REMARK 465 GLN A 169 REMARK 465 ALA A 170 REMARK 465 VAL A 171 REMARK 465 LYS A 211 REMARK 465 PRO A 212 REMARK 465 ASP A 213 REMARK 465 SER A 341 REMARK 465 GLU A 342 REMARK 465 ASN A 343 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 75 OE1 NE2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 GLN A 160 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 305 O HOH A 2172 1.82 REMARK 500 O1S MES A 1342 O HOH A 2196 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 73 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 LEU A 272 CA - CB - CG ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 268 54.94 -118.00 REMARK 500 VAL A 301 -78.58 -111.19 REMARK 500 ASP A 321 75.87 -164.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1341 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 293 NE2 REMARK 620 2 HIS A 297 NE2 99.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 1342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1347 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X3B RELATED DB: PDB REMARK 900 ASAP1 INACTIVE MUTANT E294A, AN EXTRACELLULAR TOXIC ZINC REMARK 900 METALLOENDOPEPTIDASE REMARK 900 RELATED ID: 2X3C RELATED DB: PDB REMARK 900 ASAP1 INACTIVE MUTANT E294Q, AN EXTRACELLULAR TOXIC ZINC REMARK 900 METALLOENDOPEPTIDASE DBREF 2X3A A 1 343 UNP Q8GMV9 Q8GMV9_AERSA 1 343 SEQADV 2X3A GLN A 294 UNP Q8GMV9 GLU 294 ENGINEERED MUTATION SEQRES 1 A 343 MET MET LYS VAL THR PRO ILE ALA LEU LEU LEU ALA GLY SEQRES 2 A 343 VAL LEU ALA SER PRO LEU CYS ALA ALA GLY LEU ASP ALA SEQRES 3 A 343 GLN LEU THR LEU VAL ASP GLY SER THR ASP ASP VAL ARG SEQRES 4 A 343 VAL ASN LEU THR LEU THR ASN THR GLY ASP LYS PRO ILE SEQRES 5 A 343 ARG LEU LEU LYS TRP GLN LEU PRO GLY SER ASP ASP ALA SEQRES 6 A 343 PRO LEU PHE LEU VAL GLU ARG ASP GLY GLN PRO VAL SER SEQRES 7 A 343 TYR GLU GLY ALA LEU ILE LYS ARG ALA ALA PRO THR ASP SEQRES 8 A 343 LYS ASP PHE GLN LEU LEU LYS ALA GLY GLN SER LEU THR SEQRES 9 A 343 VAL GLN ALA GLU VAL SER GLY LEU TYR ASP MET SER ALA SEQRES 10 A 343 GLN GLY GLN TYR SER ILE ARG TYR GLN LEU PRO ALA ARG SEQRES 11 A 343 ARG LYS ARG PRO ARG ALA LYS GLN ALA GLN ALA SER GLU SEQRES 12 A 343 SER ASN ALA ILE THR LEU TRP VAL GLU GLY VAL ASN ASP SEQRES 13 A 343 GLU ARG VAL GLN ALA LYS VAL ALA ALA ALA GLU PRO GLN SEQRES 14 A 343 ALA VAL ALA GLY SER VAL SER PHE SER GLY ARG CYS THR SEQRES 15 A 343 ASN THR GLN LYS SER ASP LEU LEU THR ALA LEU ASP ALA SEQRES 16 A 343 ALA SER GLY ILE SER ASN ASN ALA SER SER TYR LEU ALA SEQRES 17 A 343 VAL ASP LYS PRO ASP GLY GLN ARG TYR ARG SER TRP PHE SEQRES 18 A 343 GLY ALA TYR SER SER ALA ARG TRP ASP GLN ALA GLU THR SEQRES 19 A 343 ASN PHE SER LYS ILE LYS ASP ALA ILE ASP ASN LYS PRO SEQRES 20 A 343 LEU THR PHE ASP CYS SER CYS LYS GLN SER TYR PHE ALA SEQRES 21 A 343 TYR VAL TYR PRO ASP GLN PRO TYR LYS VAL TYR LEU CYS SEQRES 22 A 343 LYS SER PHE TRP THR ALA PRO VAL THR GLY SER ASP SER SEQRES 23 A 343 ARG ALA GLY THR ILE VAL HIS GLN LEU SER HIS PHE ASN SEQRES 24 A 343 VAL VAL ALA GLY THR ASP ASP LEU GLY TYR GLY GLN ALA SEQRES 25 A 343 ASN ALA ARG ASN LEU ALA LYS THR ASP PRO VAL LYS ALA SEQRES 26 A 343 LEU ASN ASN ALA ASP ASN HIS GLU TYR PHE ALA GLU ASN SEQRES 27 A 343 THR PRO SER GLU ASN HET ZN A1341 1 HET MES A1342 12 HET SO4 A1343 5 HET SO4 A1344 5 HET SO4 A1345 5 HET GOL A1346 6 HET GOL A1347 6 HETNAM ZN ZINC ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 MES C6 H13 N O4 S FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 HOH *199(H2 O) HELIX 1 1 TRP A 57 LEU A 59 5 3 HELIX 2 2 THR A 90 LYS A 92 5 3 HELIX 3 3 THR A 182 VAL A 209 1 28 HELIX 4 4 GLY A 214 GLY A 222 1 9 HELIX 5 5 SER A 225 LYS A 246 1 22 HELIX 6 6 CYS A 273 ALA A 279 1 7 HELIX 7 7 SER A 286 PHE A 298 1 13 HELIX 8 8 GLY A 310 ASP A 321 1 12 HELIX 9 9 ASP A 321 LEU A 326 1 6 HELIX 10 10 ASN A 328 ASN A 338 1 11 SHEET 1 AA 3 LEU A 24 LEU A 30 0 SHEET 2 AA 3 ARG A 39 ASN A 46 -1 O ASN A 41 N THR A 29 SHEET 3 AA 3 SER A 102 GLU A 108 -1 O LEU A 103 N LEU A 44 SHEET 1 AB 2 ILE A 52 LEU A 55 0 SHEET 2 AB 2 PHE A 94 LEU A 97 -1 O GLN A 95 N LEU A 54 SHEET 1 AC 4 GLN A 75 PRO A 76 0 SHEET 2 AC 4 PHE A 68 ARG A 72 -1 O ARG A 72 N GLN A 75 SHEET 3 AC 4 GLY A 119 TYR A 125 -1 O SER A 122 N GLU A 71 SHEET 4 AC 4 ILE A 147 VAL A 151 -1 O ILE A 147 N ILE A 123 SHEET 1 AD 4 SER A 174 SER A 178 0 SHEET 2 AD 4 PRO A 247 ASP A 251 1 O LEU A 248 N SER A 176 SHEET 3 AD 4 LYS A 269 LEU A 272 1 O VAL A 270 N ASP A 251 SHEET 4 AD 4 ALA A 260 TYR A 261 -1 O TYR A 261 N TYR A 271 SSBOND 1 CYS A 181 CYS A 252 1555 1555 2.13 SSBOND 2 CYS A 254 CYS A 273 1555 1555 2.11 LINK NE2 HIS A 293 ZN ZN A1341 1555 1555 1.85 LINK NE2 HIS A 297 ZN ZN A1341 1555 1555 2.35 CISPEP 1 PRO A 267 TYR A 268 0 -4.95 CISPEP 2 THR A 339 PRO A 340 0 -4.68 SITE 1 AC1 5 ILE A 84 LYS A 85 HIS A 293 HIS A 297 SITE 2 AC1 5 ASP A 306 SITE 1 AC2 10 SER A 62 ASP A 64 ALA A 82 CYS A 254 SITE 2 AC2 10 GLN A 256 TYR A 258 TYR A 261 HOH A2194 SITE 3 AC2 10 HOH A2195 HOH A2196 SITE 1 AC3 6 GLN A 106 TYR A 224 SER A 225 SER A 226 SITE 2 AC3 6 HOH A2059 HOH A2197 SITE 1 AC4 5 LEU A 149 TRP A 150 PRO A 280 VAL A 281 SITE 2 AC4 5 THR A 282 SITE 1 AC5 3 ARG A 218 ALA A 223 TYR A 224 SITE 1 AC6 3 ARG A 124 ASN A 145 ALA A 146 SITE 1 AC7 8 GLY A 61 GLN A 106 ALA A 107 GLU A 108 SITE 2 AC7 8 LEU A 112 ARG A 180 HOH A2198 HOH A2199 CRYST1 98.249 74.468 54.703 90.00 112.35 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010178 0.000000 0.004185 0.00000 SCALE2 0.000000 0.013429 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019765 0.00000