data_2XDG # _entry.id 2XDG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2XDG pdb_00002xdg 10.2210/pdb2xdg/pdb PDBE EBI-43822 ? ? WWPDB D_1290043822 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-16 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-12-20 6 'Structure model' 1 5 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_database_status 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_struct_conn_angle 9 5 'Structure model' struct_conn 10 5 'Structure model' struct_site 11 6 'Structure model' pdbx_entry_details 12 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 4 'Structure model' '_citation_author.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_database_status.status_code_sf' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 5 'Structure model' '_pdbx_struct_conn_angle.value' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr1_symmetry' 32 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_symmetry' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 43 6 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XDG _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-04-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pike, A.C.W.' 1 'Quigley, A.' 2 'Barr, A.J.' 3 'Burgess Brown, N.' 4 'Shrestha, L.' 5 'Yang, J.' 6 'Chaikuad, A.' 7 'Vollmar, M.' 8 'Muniz, J.R.C.' 9 'von Delft, F.' 10 'Edwards, A.' 11 'Arrowsmith, C.H.' 12 'Weigelt, J.' 13 'Bountra, C.' 14 'Carpenter, E.P.' 15 # _citation.id primary _citation.title 'Crystal Structure of the Extracellular Domain of Human Growth Hormone Releasing Hormone Receptor.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pike, A.C.W.' 1 ? primary 'Quigley, A.' 2 ? primary 'Barr, A.J.' 3 ? primary 'Burgess Brown, N.' 4 ? primary 'Shrestha, L.' 5 ? primary 'Yang, J.' 6 ? primary 'Chaikuad, A.' 7 ? primary 'Vollmar, M.' 8 ? primary 'Muniz, J.R.C.' 9 ? primary 'von Delft, F.' 10 ? primary 'Edwards, A.' 11 ? primary 'Arrowsmith, C.H.' 12 ? primary 'Weigelt, J.' 13 ? primary 'Bountra, C.' 14 ? primary 'Carpenter, E.P.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GROWTH HORMONE-RELEASING HORMONE RECEPTOR' 10026.190 2 ? YES 'EXTRACELLULAR DOMAIN, RESIDUES 34-123' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GHRH RECEPTOR, GROWTH HORMONE-RELEASING FACTOR GRF RECEPTOR, GRFR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMLREDESACLQAAEEMPQTTLGCPATWDGLLCWPTAGSGEWVTLPCPDFFSHFSSESGAVKRDCTITGWSEPFPPYPVA CPVPLELLAEEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMLREDESACLQAAEEMPQTTLGCPATWDGLLCWPTAGSGEWVTLPCPDFFSHFSSESGAVKRDCTITGWSEPFPPYPVA CPVPLELLAEEE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LEU n 1 4 ARG n 1 5 GLU n 1 6 ASP n 1 7 GLU n 1 8 SER n 1 9 ALA n 1 10 CYS n 1 11 LEU n 1 12 GLN n 1 13 ALA n 1 14 ALA n 1 15 GLU n 1 16 GLU n 1 17 MET n 1 18 PRO n 1 19 GLN n 1 20 THR n 1 21 THR n 1 22 LEU n 1 23 GLY n 1 24 CYS n 1 25 PRO n 1 26 ALA n 1 27 THR n 1 28 TRP n 1 29 ASP n 1 30 GLY n 1 31 LEU n 1 32 LEU n 1 33 CYS n 1 34 TRP n 1 35 PRO n 1 36 THR n 1 37 ALA n 1 38 GLY n 1 39 SER n 1 40 GLY n 1 41 GLU n 1 42 TRP n 1 43 VAL n 1 44 THR n 1 45 LEU n 1 46 PRO n 1 47 CYS n 1 48 PRO n 1 49 ASP n 1 50 PHE n 1 51 PHE n 1 52 SER n 1 53 HIS n 1 54 PHE n 1 55 SER n 1 56 SER n 1 57 GLU n 1 58 SER n 1 59 GLY n 1 60 ALA n 1 61 VAL n 1 62 LYS n 1 63 ARG n 1 64 ASP n 1 65 CYS n 1 66 THR n 1 67 ILE n 1 68 THR n 1 69 GLY n 1 70 TRP n 1 71 SER n 1 72 GLU n 1 73 PRO n 1 74 PHE n 1 75 PRO n 1 76 PRO n 1 77 TYR n 1 78 PRO n 1 79 VAL n 1 80 ALA n 1 81 CYS n 1 82 PRO n 1 83 VAL n 1 84 PRO n 1 85 LEU n 1 86 GLU n 1 87 LEU n 1 88 LEU n 1 89 ALA n 1 90 GLU n 1 91 GLU n 1 92 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PFB-SEC-NH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 ? ? ? A . n A 1 2 MET 2 0 0 MET MET A . n A 1 3 LEU 3 34 34 LEU LEU A . n A 1 4 ARG 4 35 35 ARG ARG A . n A 1 5 GLU 5 36 36 GLU GLU A . n A 1 6 ASP 6 37 37 ASP ASP A . n A 1 7 GLU 7 38 38 GLU GLU A . n A 1 8 SER 8 39 39 SER SER A . n A 1 9 ALA 9 40 40 ALA ALA A . n A 1 10 CYS 10 41 41 CYS CYS A . n A 1 11 LEU 11 42 42 LEU LEU A . n A 1 12 GLN 12 43 43 GLN GLN A . n A 1 13 ALA 13 44 44 ALA ALA A . n A 1 14 ALA 14 45 45 ALA ALA A . n A 1 15 GLU 15 46 46 GLU GLU A . n A 1 16 GLU 16 47 47 GLU GLU A . n A 1 17 MET 17 48 48 MET MET A . n A 1 18 PRO 18 49 49 PRO PRO A . n A 1 19 GLN 19 50 50 GLN GLN A . n A 1 20 THR 20 51 51 THR THR A . n A 1 21 THR 21 52 52 THR THR A . n A 1 22 LEU 22 53 53 LEU LEU A . n A 1 23 GLY 23 54 54 GLY GLY A . n A 1 24 CYS 24 55 55 CYS CYS A . n A 1 25 PRO 25 56 56 PRO PRO A . n A 1 26 ALA 26 57 57 ALA ALA A . n A 1 27 THR 27 58 58 THR THR A . n A 1 28 TRP 28 59 59 TRP TRP A . n A 1 29 ASP 29 60 60 ASP ASP A . n A 1 30 GLY 30 61 61 GLY GLY A . n A 1 31 LEU 31 62 62 LEU LEU A . n A 1 32 LEU 32 63 63 LEU LEU A . n A 1 33 CYS 33 64 64 CYS CYS A . n A 1 34 TRP 34 65 65 TRP TRP A . n A 1 35 PRO 35 66 66 PRO PRO A . n A 1 36 THR 36 67 67 THR THR A . n A 1 37 ALA 37 68 68 ALA ALA A . n A 1 38 GLY 38 69 69 GLY GLY A . n A 1 39 SER 39 70 70 SER SER A . n A 1 40 GLY 40 71 71 GLY GLY A . n A 1 41 GLU 41 72 72 GLU GLU A . n A 1 42 TRP 42 73 73 TRP TRP A . n A 1 43 VAL 43 74 74 VAL VAL A . n A 1 44 THR 44 75 75 THR THR A . n A 1 45 LEU 45 76 76 LEU LEU A . n A 1 46 PRO 46 77 77 PRO PRO A . n A 1 47 CYS 47 78 78 CYS CYS A . n A 1 48 PRO 48 79 79 PRO PRO A . n A 1 49 ASP 49 80 80 ASP ASP A . n A 1 50 PHE 50 81 81 PHE PHE A . n A 1 51 PHE 51 82 82 PHE PHE A . n A 1 52 SER 52 83 83 SER SER A . n A 1 53 HIS 53 84 84 HIS HIS A . n A 1 54 PHE 54 85 85 PHE PHE A . n A 1 55 SER 55 86 86 SER SER A . n A 1 56 SER 56 87 87 SER SER A . n A 1 57 GLU 57 88 88 GLU GLU A . n A 1 58 SER 58 89 89 SER SER A . n A 1 59 GLY 59 90 90 GLY GLY A . n A 1 60 ALA 60 91 91 ALA ALA A . n A 1 61 VAL 61 92 92 VAL VAL A . n A 1 62 LYS 62 93 93 LYS LYS A . n A 1 63 ARG 63 94 94 ARG ARG A . n A 1 64 ASP 64 95 95 ASP ASP A . n A 1 65 CYS 65 96 96 CYS CYS A . n A 1 66 THR 66 97 97 THR THR A . n A 1 67 ILE 67 98 98 ILE ILE A . n A 1 68 THR 68 99 99 THR THR A . n A 1 69 GLY 69 100 100 GLY GLY A . n A 1 70 TRP 70 101 101 TRP TRP A . n A 1 71 SER 71 102 102 SER SER A . n A 1 72 GLU 72 103 103 GLU GLU A . n A 1 73 PRO 73 104 104 PRO PRO A . n A 1 74 PHE 74 105 105 PHE PHE A . n A 1 75 PRO 75 106 106 PRO PRO A . n A 1 76 PRO 76 107 107 PRO PRO A . n A 1 77 TYR 77 108 108 TYR TYR A . n A 1 78 PRO 78 109 109 PRO PRO A . n A 1 79 VAL 79 110 110 VAL VAL A . n A 1 80 ALA 80 111 111 ALA ALA A . n A 1 81 CYS 81 112 112 CYS CYS A . n A 1 82 PRO 82 113 113 PRO PRO A . n A 1 83 VAL 83 114 114 VAL VAL A . n A 1 84 PRO 84 115 115 PRO PRO A . n A 1 85 LEU 85 116 116 LEU LEU A . n A 1 86 GLU 86 117 117 GLU GLU A . n A 1 87 LEU 87 118 118 LEU LEU A . n A 1 88 LEU 88 119 119 LEU LEU A . n A 1 89 ALA 89 120 120 ALA ALA A . n A 1 90 GLU 90 121 121 GLU GLU A . n A 1 91 GLU 91 122 ? ? ? A . n A 1 92 GLU 92 123 ? ? ? A . n B 1 1 SER 1 -1 ? ? ? B . n B 1 2 MET 2 0 0 MET MET B . n B 1 3 LEU 3 34 34 LEU LEU B . n B 1 4 ARG 4 35 35 ARG ARG B . n B 1 5 GLU 5 36 36 GLU GLU B . n B 1 6 ASP 6 37 37 ASP ASP B . n B 1 7 GLU 7 38 38 GLU GLU B . n B 1 8 SER 8 39 39 SER SER B . n B 1 9 ALA 9 40 40 ALA ALA B . n B 1 10 CYS 10 41 41 CYS CYS B . n B 1 11 LEU 11 42 42 LEU LEU B . n B 1 12 GLN 12 43 43 GLN GLN B . n B 1 13 ALA 13 44 44 ALA ALA B . n B 1 14 ALA 14 45 45 ALA ALA B . n B 1 15 GLU 15 46 46 GLU GLU B . n B 1 16 GLU 16 47 47 GLU GLU B . n B 1 17 MET 17 48 48 MET MET B . n B 1 18 PRO 18 49 49 PRO PRO B . n B 1 19 GLN 19 50 50 GLN GLN B . n B 1 20 THR 20 51 51 THR THR B . n B 1 21 THR 21 52 52 THR THR B . n B 1 22 LEU 22 53 53 LEU LEU B . n B 1 23 GLY 23 54 54 GLY GLY B . n B 1 24 CYS 24 55 55 CYS CYS B . n B 1 25 PRO 25 56 56 PRO PRO B . n B 1 26 ALA 26 57 57 ALA ALA B . n B 1 27 THR 27 58 58 THR THR B . n B 1 28 TRP 28 59 59 TRP TRP B . n B 1 29 ASP 29 60 60 ASP ASP B . n B 1 30 GLY 30 61 61 GLY GLY B . n B 1 31 LEU 31 62 62 LEU LEU B . n B 1 32 LEU 32 63 63 LEU LEU B . n B 1 33 CYS 33 64 64 CYS CYS B . n B 1 34 TRP 34 65 65 TRP TRP B . n B 1 35 PRO 35 66 66 PRO PRO B . n B 1 36 THR 36 67 67 THR THR B . n B 1 37 ALA 37 68 68 ALA ALA B . n B 1 38 GLY 38 69 69 GLY GLY B . n B 1 39 SER 39 70 70 SER SER B . n B 1 40 GLY 40 71 71 GLY GLY B . n B 1 41 GLU 41 72 72 GLU GLU B . n B 1 42 TRP 42 73 73 TRP TRP B . n B 1 43 VAL 43 74 74 VAL VAL B . n B 1 44 THR 44 75 75 THR THR B . n B 1 45 LEU 45 76 76 LEU LEU B . n B 1 46 PRO 46 77 77 PRO PRO B . n B 1 47 CYS 47 78 78 CYS CYS B . n B 1 48 PRO 48 79 79 PRO PRO B . n B 1 49 ASP 49 80 80 ASP ASP B . n B 1 50 PHE 50 81 81 PHE PHE B . n B 1 51 PHE 51 82 82 PHE PHE B . n B 1 52 SER 52 83 83 SER SER B . n B 1 53 HIS 53 84 84 HIS HIS B . n B 1 54 PHE 54 85 85 PHE PHE B . n B 1 55 SER 55 86 86 SER SER B . n B 1 56 SER 56 87 87 SER SER B . n B 1 57 GLU 57 88 88 GLU GLU B . n B 1 58 SER 58 89 89 SER SER B . n B 1 59 GLY 59 90 90 GLY GLY B . n B 1 60 ALA 60 91 91 ALA ALA B . n B 1 61 VAL 61 92 92 VAL VAL B . n B 1 62 LYS 62 93 93 LYS LYS B . n B 1 63 ARG 63 94 94 ARG ARG B . n B 1 64 ASP 64 95 95 ASP ASP B . n B 1 65 CYS 65 96 96 CYS CYS B . n B 1 66 THR 66 97 97 THR THR B . n B 1 67 ILE 67 98 98 ILE ILE B . n B 1 68 THR 68 99 99 THR THR B . n B 1 69 GLY 69 100 100 GLY GLY B . n B 1 70 TRP 70 101 101 TRP TRP B . n B 1 71 SER 71 102 102 SER SER B . n B 1 72 GLU 72 103 103 GLU GLU B . n B 1 73 PRO 73 104 104 PRO PRO B . n B 1 74 PHE 74 105 105 PHE PHE B . n B 1 75 PRO 75 106 106 PRO PRO B . n B 1 76 PRO 76 107 107 PRO PRO B . n B 1 77 TYR 77 108 108 TYR TYR B . n B 1 78 PRO 78 109 109 PRO PRO B . n B 1 79 VAL 79 110 110 VAL VAL B . n B 1 80 ALA 80 111 111 ALA ALA B . n B 1 81 CYS 81 112 112 CYS CYS B . n B 1 82 PRO 82 113 113 PRO PRO B . n B 1 83 VAL 83 114 114 VAL VAL B . n B 1 84 PRO 84 115 115 PRO PRO B . n B 1 85 LEU 85 116 116 LEU LEU B . n B 1 86 GLU 86 117 117 GLU GLU B . n B 1 87 LEU 87 118 118 LEU LEU B . n B 1 88 LEU 88 119 119 LEU LEU B . n B 1 89 ALA 89 120 120 ALA ALA B . n B 1 90 GLU 90 121 121 GLU GLU B . n B 1 91 GLU 91 122 ? ? ? B . n B 1 92 GLU 92 123 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 1122 1122 MG MG A . D 3 EDO 1 1123 1123 EDO EDO A . E 2 MG 1 1122 1122 MG MG B . F 2 MG 1 1123 1123 MG MG B . G 3 EDO 1 1124 1124 EDO EDO B . H 4 HOH 1 2001 2001 HOH HOH A . H 4 HOH 2 2002 2002 HOH HOH A . H 4 HOH 3 2003 2003 HOH HOH A . H 4 HOH 4 2004 2004 HOH HOH A . H 4 HOH 5 2005 2005 HOH HOH A . H 4 HOH 6 2006 2006 HOH HOH A . H 4 HOH 7 2007 2007 HOH HOH A . H 4 HOH 8 2008 2008 HOH HOH A . H 4 HOH 9 2009 2009 HOH HOH A . H 4 HOH 10 2010 2010 HOH HOH A . H 4 HOH 11 2011 2011 HOH HOH A . H 4 HOH 12 2012 2012 HOH HOH A . H 4 HOH 13 2013 2013 HOH HOH A . H 4 HOH 14 2014 2014 HOH HOH A . H 4 HOH 15 2015 2015 HOH HOH A . H 4 HOH 16 2016 2016 HOH HOH A . H 4 HOH 17 2017 2017 HOH HOH A . H 4 HOH 18 2018 2018 HOH HOH A . H 4 HOH 19 2019 2019 HOH HOH A . H 4 HOH 20 2020 2020 HOH HOH A . H 4 HOH 21 2021 2021 HOH HOH A . H 4 HOH 22 2022 2022 HOH HOH A . H 4 HOH 23 2023 2023 HOH HOH A . H 4 HOH 24 2024 2024 HOH HOH A . H 4 HOH 25 2025 2025 HOH HOH A . H 4 HOH 26 2026 2026 HOH HOH A . H 4 HOH 27 2027 2027 HOH HOH A . H 4 HOH 28 2028 2028 HOH HOH A . H 4 HOH 29 2029 2029 HOH HOH A . H 4 HOH 30 2030 2030 HOH HOH A . H 4 HOH 31 2031 2031 HOH HOH A . H 4 HOH 32 2032 2032 HOH HOH A . H 4 HOH 33 2033 2033 HOH HOH A . H 4 HOH 34 2034 2034 HOH HOH A . H 4 HOH 35 2035 2035 HOH HOH A . H 4 HOH 36 2036 2036 HOH HOH A . H 4 HOH 37 2037 2037 HOH HOH A . H 4 HOH 38 2038 2038 HOH HOH A . H 4 HOH 39 2039 2039 HOH HOH A . H 4 HOH 40 2040 2040 HOH HOH A . H 4 HOH 41 2041 2041 HOH HOH A . H 4 HOH 42 2042 2042 HOH HOH A . H 4 HOH 43 2043 2043 HOH HOH A . H 4 HOH 44 2044 2044 HOH HOH A . I 4 HOH 1 2001 2001 HOH HOH B . I 4 HOH 2 2002 2002 HOH HOH B . I 4 HOH 3 2003 2003 HOH HOH B . I 4 HOH 4 2004 2004 HOH HOH B . I 4 HOH 5 2005 2005 HOH HOH B . I 4 HOH 6 2006 2006 HOH HOH B . I 4 HOH 7 2007 2007 HOH HOH B . I 4 HOH 8 2008 2008 HOH HOH B . I 4 HOH 9 2009 2009 HOH HOH B . I 4 HOH 10 2010 2010 HOH HOH B . I 4 HOH 11 2011 2011 HOH HOH B . I 4 HOH 12 2012 2012 HOH HOH B . I 4 HOH 13 2013 2013 HOH HOH B . I 4 HOH 14 2014 2014 HOH HOH B . I 4 HOH 15 2015 2015 HOH HOH B . I 4 HOH 16 2016 2016 HOH HOH B . I 4 HOH 17 2017 2017 HOH HOH B . I 4 HOH 18 2018 2018 HOH HOH B . I 4 HOH 19 2019 2019 HOH HOH B . I 4 HOH 20 2020 2020 HOH HOH B . I 4 HOH 21 2021 2021 HOH HOH B . I 4 HOH 22 2022 2022 HOH HOH B . I 4 HOH 23 2023 2023 HOH HOH B . I 4 HOH 24 2024 2024 HOH HOH B . I 4 HOH 25 2025 2025 HOH HOH B . I 4 HOH 26 2026 2026 HOH HOH B . I 4 HOH 27 2027 2027 HOH HOH B . I 4 HOH 28 2028 2028 HOH HOH B . I 4 HOH 29 2029 2029 HOH HOH B . I 4 HOH 30 2030 2030 HOH HOH B . I 4 HOH 31 2031 2031 HOH HOH B . I 4 HOH 32 2032 2032 HOH HOH B . I 4 HOH 33 2033 2033 HOH HOH B . I 4 HOH 34 2034 2034 HOH HOH B . I 4 HOH 35 2035 2035 HOH HOH B . I 4 HOH 36 2036 2036 HOH HOH B . I 4 HOH 37 2037 2037 HOH HOH B . I 4 HOH 38 2038 2038 HOH HOH B . I 4 HOH 39 2039 2039 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 35 ? CG ? A ARG 4 CG 2 1 Y 1 A ARG 35 ? CD ? A ARG 4 CD 3 1 Y 1 A ARG 35 ? NE ? A ARG 4 NE 4 1 Y 1 A ARG 35 ? CZ ? A ARG 4 CZ 5 1 Y 1 A ARG 35 ? NH1 ? A ARG 4 NH1 6 1 Y 1 A ARG 35 ? NH2 ? A ARG 4 NH2 7 1 Y 1 A GLU 36 ? CG ? A GLU 5 CG 8 1 Y 1 A GLU 36 ? CD ? A GLU 5 CD 9 1 Y 1 A GLU 36 ? OE1 ? A GLU 5 OE1 10 1 Y 1 A GLU 36 ? OE2 ? A GLU 5 OE2 11 1 Y 1 A GLN 50 ? CD ? A GLN 19 CD 12 1 Y 1 A GLN 50 ? OE1 ? A GLN 19 OE1 13 1 Y 1 A GLN 50 ? NE2 ? A GLN 19 NE2 14 1 Y 1 A SER 87 ? OG ? A SER 56 OG 15 1 Y 1 A GLU 121 ? CD ? A GLU 90 CD 16 1 Y 1 A GLU 121 ? OE1 ? A GLU 90 OE1 17 1 Y 1 A GLU 121 ? OE2 ? A GLU 90 OE2 18 1 Y 1 B MET 0 ? SD ? B MET 2 SD 19 1 Y 1 B MET 0 ? CE ? B MET 2 CE 20 1 Y 1 B ARG 35 ? CG ? B ARG 4 CG 21 1 Y 1 B ARG 35 ? CD ? B ARG 4 CD 22 1 Y 1 B ARG 35 ? NE ? B ARG 4 NE 23 1 Y 1 B ARG 35 ? CZ ? B ARG 4 CZ 24 1 Y 1 B ARG 35 ? NH1 ? B ARG 4 NH1 25 1 Y 1 B ARG 35 ? NH2 ? B ARG 4 NH2 26 1 Y 1 B GLU 47 ? CG ? B GLU 16 CG 27 1 Y 1 B GLU 47 ? CD ? B GLU 16 CD 28 1 Y 1 B GLU 47 ? OE1 ? B GLU 16 OE1 29 1 Y 1 B GLU 47 ? OE2 ? B GLU 16 OE2 30 1 Y 1 B LEU 53 ? CG ? B LEU 22 CG 31 1 Y 1 B LEU 53 ? CD1 ? B LEU 22 CD1 32 1 Y 1 B LEU 53 ? CD2 ? B LEU 22 CD2 33 1 Y 1 B GLU 121 ? CG ? B GLU 90 CG 34 1 Y 1 B GLU 121 ? CD ? B GLU 90 CD 35 1 Y 1 B GLU 121 ? OE1 ? B GLU 90 OE1 36 1 Y 1 B GLU 121 ? OE2 ? B GLU 90 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0066 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2XDG _cell.length_a 31.648 _cell.length_b 31.648 _cell.length_c 287.138 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XDG _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 # _exptl.entry_id 2XDG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 41 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG6000, 0.15M MGCL2, 10% ETHYLENE GLYCOL, 0.1M TRIS PH7.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2010-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9779 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_wavelength 0.9779 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XDG _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.71 _reflns.d_resolution_high 1.95 _reflns.number_obs 11887 _reflns.number_all ? _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.00 _reflns.B_iso_Wilson_estimate 27.6 _reflns.pdbx_redundancy 6.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 95.9 _reflns_shell.Rmerge_I_obs 0.79 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.60 _reflns_shell.pdbx_redundancy 6.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XDG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11160 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.41 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 99.80 _refine.ls_R_factor_obs 0.16742 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16451 _refine.ls_R_factor_R_free 0.22288 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 609 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 27.414 _refine.aniso_B[1][1] 3.07 _refine.aniso_B[2][2] 3.07 _refine.aniso_B[3][3] -6.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U VALUES WITH TLS ADDED. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS ; _refine.pdbx_starting_model 'PDB ENTRY 2X57' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.035 _refine.pdbx_overall_ESU_R_Free 0.033 _refine.overall_SU_ML 0.067 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.459 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1316 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 1410 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 27.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 1379 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 907 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.525 1.970 ? 1902 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.504 3.011 ? 2216 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.114 5.000 ? 176 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.039 25.000 ? 48 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.557 15.000 ? 174 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.967 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.080 0.200 ? 207 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.022 ? 1532 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 254 'X-RAY DIFFRACTION' ? r_nbd_refined 0.221 0.200 ? 290 'X-RAY DIFFRACTION' ? r_nbd_other 0.195 0.200 ? 863 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.181 0.200 ? 677 'X-RAY DIFFRACTION' ? r_nbtor_other 0.094 0.200 ? 604 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.226 0.200 ? 55 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.132 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.202 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.197 0.200 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.197 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.949 _refine_ls_shell.d_res_low 2.000 _refine_ls_shell.number_reflns_R_work 798 _refine_ls_shell.R_factor_R_work 0.197 _refine_ls_shell.percent_reflns_obs 97.93 _refine_ls_shell.R_factor_R_free 0.314 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2XDG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2XDG _struct.title 'Crystal structure of the extracellular domain of human growth hormone releasing hormone receptor.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XDG _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SIGNALING PROTEIN, RECEPTOR, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GHRHR_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q02643 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2XDG A 3 ? 92 ? Q02643 34 ? 123 ? 34 123 2 1 2XDG B 3 ? 92 ? Q02643 34 ? 123 ? 34 123 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2XDG SER A 1 ? UNP Q02643 ? ? 'expression tag' -1 1 1 2XDG MET A 2 ? UNP Q02643 ? ? 'expression tag' 0 2 1 2XDG GLN A 19 ? UNP Q02643 ASN 50 'engineered mutation' 50 3 2 2XDG SER B 1 ? UNP Q02643 ? ? 'expression tag' -1 4 2 2XDG MET B 2 ? UNP Q02643 ? ? 'expression tag' 0 5 2 2XDG GLN B 19 ? UNP Q02643 ASN 50 'engineered mutation' 50 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1270 ? 1 MORE -19.6 ? 1 'SSA (A^2)' 11170 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1 A,C,D,H 3 1 B,E,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 2 ? GLU A 15 ? MET A 0 GLU A 46 1 ? 14 HELX_P HELX_P2 2 PRO A 48 ? PHE A 54 ? PRO A 79 PHE A 85 5 ? 7 HELX_P HELX_P3 3 PRO A 76 ? CYS A 81 ? PRO A 107 CYS A 112 1 ? 6 HELX_P HELX_P4 4 PRO A 84 ? ALA A 89 ? PRO A 115 ALA A 120 5 ? 6 HELX_P HELX_P5 5 MET B 2 ? GLU B 16 ? MET B 0 GLU B 47 1 ? 15 HELX_P HELX_P6 6 PRO B 48 ? PHE B 54 ? PRO B 79 PHE B 85 5 ? 7 HELX_P HELX_P7 7 PRO B 76 ? CYS B 81 ? PRO B 107 CYS B 112 1 ? 6 HELX_P HELX_P8 8 PRO B 84 ? LEU B 88 ? PRO B 115 LEU B 119 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 33 SG ? ? A CYS 41 A CYS 64 1_555 ? ? ? ? ? ? ? 2.088 ? ? disulf2 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 55 A CYS 96 1_555 ? ? ? ? ? ? ? 2.073 ? ? disulf3 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 78 A CYS 112 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf4 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 33 SG ? ? B CYS 41 B CYS 64 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf5 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 65 SG ? ? B CYS 55 B CYS 96 1_555 ? ? ? ? ? ? ? 2.080 ? ? disulf6 disulf ? ? B CYS 47 SG ? ? ? 1_555 B CYS 81 SG ? ? B CYS 78 B CYS 112 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc1 metalc ? ? A MET 2 N ? ? ? 1_555 C MG . MG ? ? A MET 0 A MG 1122 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc2 metalc ? ? A ASP 49 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 80 A MG 1122 1_555 ? ? ? ? ? ? ? 2.973 ? ? metalc3 metalc ? ? A ASP 49 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 80 A MG 1122 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc4 metalc ? ? A HIS 53 NE2 ? ? ? 6_555 E MG . MG ? ? A HIS 84 B MG 1122 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc5 metalc ? ? A HIS 53 ND1 ? ? ? 6_555 F MG . MG ? ? A HIS 84 B MG 1123 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1122 A HOH 2001 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 B HIS 53 ND1 ? ? A MG 1122 B HIS 84 5_554 ? ? ? ? ? ? ? 2.420 ? ? metalc8 metalc ? ? H HOH . O ? ? ? 6_555 E MG . MG ? ? A HOH 2028 B MG 1122 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc9 metalc ? ? B MET 2 N ? ? ? 1_555 F MG . MG ? ? B MET 0 B MG 1123 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc10 metalc ? ? B ASP 49 OD1 ? ? ? 1_555 F MG . MG ? ? B ASP 80 B MG 1123 1_555 ? ? ? ? ? ? ? 2.882 ? ? metalc11 metalc ? ? B ASP 49 OD2 ? ? ? 1_555 F MG . MG ? ? B ASP 80 B MG 1123 1_555 ? ? ? ? ? ? ? 2.751 ? ? metalc12 metalc ? ? B HIS 53 NE2 ? ? ? 1_555 E MG . MG ? ? B HIS 84 B MG 1122 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? B MG 1122 B HOH 2024 1_555 ? ? ? ? ? ? ? 1.858 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? B MG 1123 B HOH 2022 1_555 ? ? ? ? ? ? ? 2.488 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A MET 2 ? A MET 0 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 OD1 ? A ASP 49 ? A ASP 80 ? 1_555 166.6 ? 2 N ? A MET 2 ? A MET 0 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 OD2 ? A ASP 49 ? A ASP 80 ? 1_555 141.7 ? 3 OD1 ? A ASP 49 ? A ASP 80 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 OD2 ? A ASP 49 ? A ASP 80 ? 1_555 47.4 ? 4 N ? A MET 2 ? A MET 0 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 O ? H HOH . ? A HOH 2001 ? 1_555 96.7 ? 5 OD1 ? A ASP 49 ? A ASP 80 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 O ? H HOH . ? A HOH 2001 ? 1_555 71.0 ? 6 OD2 ? A ASP 49 ? A ASP 80 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 O ? H HOH . ? A HOH 2001 ? 1_555 93.5 ? 7 N ? A MET 2 ? A MET 0 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 ND1 ? B HIS 53 ? B HIS 84 ? 5_554 109.6 ? 8 OD1 ? A ASP 49 ? A ASP 80 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 ND1 ? B HIS 53 ? B HIS 84 ? 5_554 70.3 ? 9 OD2 ? A ASP 49 ? A ASP 80 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 ND1 ? B HIS 53 ? B HIS 84 ? 5_554 102.7 ? 10 O ? H HOH . ? A HOH 2001 ? 1_555 MG ? C MG . ? A MG 1122 ? 1_555 ND1 ? B HIS 53 ? B HIS 84 ? 5_554 106.2 ? 11 NE2 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? E MG . ? B MG 1122 ? 1_555 O ? H HOH . ? A HOH 2028 ? 6_555 84.7 ? 12 NE2 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? E MG . ? B MG 1122 ? 1_555 NE2 ? B HIS 53 ? B HIS 84 ? 1_555 100.2 ? 13 O ? H HOH . ? A HOH 2028 ? 6_555 MG ? E MG . ? B MG 1122 ? 1_555 NE2 ? B HIS 53 ? B HIS 84 ? 1_555 84.9 ? 14 NE2 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? E MG . ? B MG 1122 ? 1_555 O ? I HOH . ? B HOH 2024 ? 1_555 145.3 ? 15 O ? H HOH . ? A HOH 2028 ? 6_555 MG ? E MG . ? B MG 1122 ? 1_555 O ? I HOH . ? B HOH 2024 ? 1_555 68.2 ? 16 NE2 ? B HIS 53 ? B HIS 84 ? 1_555 MG ? E MG . ? B MG 1122 ? 1_555 O ? I HOH . ? B HOH 2024 ? 1_555 98.6 ? 17 ND1 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? F MG . ? B MG 1123 ? 1_555 N ? B MET 2 ? B MET 0 ? 1_555 122.8 ? 18 ND1 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? F MG . ? B MG 1123 ? 1_555 OD1 ? B ASP 49 ? B ASP 80 ? 1_555 75.1 ? 19 N ? B MET 2 ? B MET 0 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 OD1 ? B ASP 49 ? B ASP 80 ? 1_555 162.1 ? 20 ND1 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? F MG . ? B MG 1123 ? 1_555 OD2 ? B ASP 49 ? B ASP 80 ? 1_555 83.9 ? 21 N ? B MET 2 ? B MET 0 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 OD2 ? B ASP 49 ? B ASP 80 ? 1_555 131.0 ? 22 OD1 ? B ASP 49 ? B ASP 80 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 OD2 ? B ASP 49 ? B ASP 80 ? 1_555 46.0 ? 23 ND1 ? A HIS 53 ? A HIS 84 ? 6_555 MG ? F MG . ? B MG 1123 ? 1_555 O ? I HOH . ? B HOH 2022 ? 1_555 86.3 ? 24 N ? B MET 2 ? B MET 0 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 O ? I HOH . ? B HOH 2022 ? 1_555 121.4 ? 25 OD1 ? B ASP 49 ? B ASP 80 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 O ? I HOH . ? B HOH 2022 ? 1_555 53.1 ? 26 OD2 ? B ASP 49 ? B ASP 80 ? 1_555 MG ? F MG . ? B MG 1123 ? 1_555 O ? I HOH . ? B HOH 2022 ? 1_555 98.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 10 ? CYS A 33 ? CYS A 41 ? 1_555 CYS A 64 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 24 ? CYS A 65 ? CYS A 55 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 47 ? CYS A 81 ? CYS A 78 ? 1_555 CYS A 112 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 10 ? CYS B 33 ? CYS B 41 ? 1_555 CYS B 64 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 24 ? CYS B 65 ? CYS B 55 ? 1_555 CYS B 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 47 ? CYS B 81 ? CYS B 78 ? 1_555 CYS B 112 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 74 A . ? PHE 105 A PRO 75 A ? PRO 106 A 1 -9.83 2 PHE 74 B . ? PHE 105 B PRO 75 B ? PRO 106 B 1 -5.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? BA ? 2 ? BB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 27 ? TRP A 28 ? THR A 58 TRP A 59 AA 2 CYS A 33 ? TRP A 34 ? CYS A 64 TRP A 65 AB 1 GLU A 41 ? LEU A 45 ? GLU A 72 LEU A 76 AB 2 VAL A 61 ? THR A 66 ? VAL A 92 THR A 97 AB 3 GLY A 69 ? TRP A 70 ? GLY A 100 TRP A 101 BA 1 THR B 27 ? TRP B 28 ? THR B 58 TRP B 59 BA 2 CYS B 33 ? TRP B 34 ? CYS B 64 TRP B 65 BB 1 GLU B 41 ? LEU B 45 ? GLU B 72 LEU B 76 BB 2 VAL B 61 ? THR B 66 ? VAL B 92 THR B 97 BB 3 GLY B 69 ? TRP B 70 ? GLY B 100 TRP B 101 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 27 ? N THR A 58 O TRP A 34 ? O TRP A 65 AB 1 2 N LEU A 45 ? N LEU A 76 O VAL A 61 ? O VAL A 92 AB 2 3 N THR A 66 ? N THR A 97 O GLY A 69 ? O GLY A 100 BA 1 2 N THR B 27 ? N THR B 58 O TRP B 34 ? O TRP B 65 BB 1 2 N LEU B 45 ? N LEU B 76 O VAL B 61 ? O VAL B 92 BB 2 3 N THR B 66 ? N THR B 97 O GLY B 69 ? O GLY B 100 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MG 1122 ? 4 'BINDING SITE FOR RESIDUE MG B 1122' AC2 Software A MG 1122 ? 4 'BINDING SITE FOR RESIDUE MG A 1122' AC3 Software B MG 1123 ? 4 'BINDING SITE FOR RESIDUE MG B 1123' AC4 Software B EDO 1124 ? 3 'BINDING SITE FOR RESIDUE EDO B 1124' AC5 Software A EDO 1123 ? 3 'BINDING SITE FOR RESIDUE EDO A 1123' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 53 ? HIS A 84 . ? 6_555 ? 2 AC1 4 HOH H . ? HOH A 2028 . ? 6_555 ? 3 AC1 4 HIS B 53 ? HIS B 84 . ? 1_555 ? 4 AC1 4 HOH I . ? HOH B 2024 . ? 1_555 ? 5 AC2 4 MET A 2 ? MET A 0 . ? 1_555 ? 6 AC2 4 ASP A 49 ? ASP A 80 . ? 1_555 ? 7 AC2 4 HOH H . ? HOH A 2001 . ? 1_555 ? 8 AC2 4 HIS B 53 ? HIS B 84 . ? 5_554 ? 9 AC3 4 HIS A 53 ? HIS A 84 . ? 6_555 ? 10 AC3 4 MET B 2 ? MET B 0 . ? 1_555 ? 11 AC3 4 ASP B 49 ? ASP B 80 . ? 1_555 ? 12 AC3 4 HOH I . ? HOH B 2022 . ? 1_555 ? 13 AC4 3 GLN B 19 ? GLN B 50 . ? 1_655 ? 14 AC4 3 GLU B 41 ? GLU B 72 . ? 1_555 ? 15 AC4 3 TRP B 42 ? TRP B 73 . ? 1_555 ? 16 AC5 3 GLU A 41 ? GLU A 72 . ? 1_555 ? 17 AC5 3 TRP A 42 ? TRP A 73 . ? 1_555 ? 18 AC5 3 HOH H . ? HOH A 2022 . ? 1_555 ? # _pdbx_entry_details.entry_id 2XDG _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, ASN 50 TO GLN ENGINEERED RESIDUE IN CHAIN B, ASN 50 TO GLN ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;SYNTHETIC CONSTRUCT WITH GLYCOSYLATION SITE ASN50 MUTATED TO GLUTAMINE (N50Q) ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B LEU 53 ? ? O B HOH 2007 ? ? 2.17 2 1 OG B SER 70 ? ? O B HOH 2017 ? ? 2.19 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 120 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 30.78 _pdbx_validate_torsion.psi 44.01 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 20.3954 -7.1955 -9.9755 0.1802 0.1786 0.1166 0.0929 0.0405 -0.0640 6.2563 6.0473 6.8228 1.2656 -0.6182 -4.5540 0.1517 0.1164 -0.1621 -0.1348 -0.0596 -0.0810 0.3804 0.3789 -0.0921 'X-RAY DIFFRACTION' 2 ? refined 11.2668 -1.5742 -4.8077 0.0519 0.0614 0.0084 -0.0247 -0.0054 -0.0067 2.8358 4.5228 3.6285 -0.9376 -1.7326 0.2711 0.0229 -0.0688 -0.0507 -0.0197 -0.0120 -0.1159 0.1100 0.1320 -0.0109 'X-RAY DIFFRACTION' 3 ? refined 6.7892 4.8724 -11.6596 0.1483 0.0958 0.0261 -0.0033 0.0268 -0.0177 1.9154 5.0447 14.0210 1.2031 -2.1735 -7.0412 -0.0006 0.1900 0.0928 -0.1081 -0.0142 -0.0892 -0.3693 -0.0656 0.0148 'X-RAY DIFFRACTION' 4 ? refined 0.7257 0.7677 -14.7419 0.2332 0.1818 0.0467 0.0175 -0.0379 0.0310 1.5269 1.3932 11.1328 -0.9815 3.0038 -3.8130 0.2584 0.3391 -0.0779 -0.1584 0.0549 0.1531 0.1888 0.0771 -0.3133 'X-RAY DIFFRACTION' 5 ? refined -16.2571 14.1001 9.6288 0.1387 0.2769 0.1332 0.0444 0.0359 0.0171 3.6082 7.4837 4.1228 -0.8986 2.0777 1.4003 -0.1888 -0.0527 -0.0756 0.0349 0.1309 0.1649 -0.3393 -0.1446 0.0580 'X-RAY DIFFRACTION' 6 ? refined -10.0161 8.8519 5.8665 0.1409 0.1531 0.0545 -0.0043 0.0073 -0.0571 4.8599 0.1891 8.4431 -0.2303 -0.3517 0.3651 -0.2490 -0.3264 -0.2334 0.0091 -0.1329 0.0931 -0.1600 -0.4481 0.3819 'X-RAY DIFFRACTION' 7 ? refined 0.1260 8.5635 8.5858 0.0997 0.0666 0.0089 -0.0018 0.0085 0.0118 4.3918 2.8899 11.0082 1.8106 4.2620 3.8071 0.0709 -0.1313 -0.0409 0.1865 0.0005 -0.0922 -0.1269 0.2450 -0.0714 'X-RAY DIFFRACTION' 8 ? refined 0.2865 1.0636 14.3754 0.2516 0.2115 0.0432 -0.0492 0.0021 0.0654 2.1227 0.4984 12.3351 -0.3086 4.2409 0.6724 0.1809 -0.3890 -0.2813 0.0970 0.2621 0.0876 0.5130 -0.1121 -0.4430 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 52 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 53 ? ? A 79 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 80 ? ? A 98 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 99 ? ? A 121 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 0 ? ? B 52 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 53 ? ? B 69 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 70 ? ? B 98 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 99 ? ? B 121 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -1 ? A SER 1 2 1 Y 1 A GLU 122 ? A GLU 91 3 1 Y 1 A GLU 123 ? A GLU 92 4 1 Y 1 B SER -1 ? B SER 1 5 1 Y 1 B GLU 122 ? B GLU 91 6 1 Y 1 B GLU 123 ? B GLU 92 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 MG MG MG N N 260 PHE N N N N 261 PHE CA C N S 262 PHE C C N N 263 PHE O O N N 264 PHE CB C N N 265 PHE CG C Y N 266 PHE CD1 C Y N 267 PHE CD2 C Y N 268 PHE CE1 C Y N 269 PHE CE2 C Y N 270 PHE CZ C Y N 271 PHE OXT O N N 272 PHE H H N N 273 PHE H2 H N N 274 PHE HA H N N 275 PHE HB2 H N N 276 PHE HB3 H N N 277 PHE HD1 H N N 278 PHE HD2 H N N 279 PHE HE1 H N N 280 PHE HE2 H N N 281 PHE HZ H N N 282 PHE HXT H N N 283 PRO N N N N 284 PRO CA C N S 285 PRO C C N N 286 PRO O O N N 287 PRO CB C N N 288 PRO CG C N N 289 PRO CD C N N 290 PRO OXT O N N 291 PRO H H N N 292 PRO HA H N N 293 PRO HB2 H N N 294 PRO HB3 H N N 295 PRO HG2 H N N 296 PRO HG3 H N N 297 PRO HD2 H N N 298 PRO HD3 H N N 299 PRO HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TRP N N N N 332 TRP CA C N S 333 TRP C C N N 334 TRP O O N N 335 TRP CB C N N 336 TRP CG C Y N 337 TRP CD1 C Y N 338 TRP CD2 C Y N 339 TRP NE1 N Y N 340 TRP CE2 C Y N 341 TRP CE3 C Y N 342 TRP CZ2 C Y N 343 TRP CZ3 C Y N 344 TRP CH2 C Y N 345 TRP OXT O N N 346 TRP H H N N 347 TRP H2 H N N 348 TRP HA H N N 349 TRP HB2 H N N 350 TRP HB3 H N N 351 TRP HD1 H N N 352 TRP HE1 H N N 353 TRP HE3 H N N 354 TRP HZ2 H N N 355 TRP HZ3 H N N 356 TRP HH2 H N N 357 TRP HXT H N N 358 TYR N N N N 359 TYR CA C N S 360 TYR C C N N 361 TYR O O N N 362 TYR CB C N N 363 TYR CG C Y N 364 TYR CD1 C Y N 365 TYR CD2 C Y N 366 TYR CE1 C Y N 367 TYR CE2 C Y N 368 TYR CZ C Y N 369 TYR OH O N N 370 TYR OXT O N N 371 TYR H H N N 372 TYR H2 H N N 373 TYR HA H N N 374 TYR HB2 H N N 375 TYR HB3 H N N 376 TYR HD1 H N N 377 TYR HD2 H N N 378 TYR HE1 H N N 379 TYR HE2 H N N 380 TYR HH H N N 381 TYR HXT H N N 382 VAL N N N N 383 VAL CA C N S 384 VAL C C N N 385 VAL O O N N 386 VAL CB C N N 387 VAL CG1 C N N 388 VAL CG2 C N N 389 VAL OXT O N N 390 VAL H H N N 391 VAL H2 H N N 392 VAL HA H N N 393 VAL HB H N N 394 VAL HG11 H N N 395 VAL HG12 H N N 396 VAL HG13 H N N 397 VAL HG21 H N N 398 VAL HG22 H N N 399 VAL HG23 H N N 400 VAL HXT H N N 401 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2X57 _pdbx_initial_refinement_model.details 'PDB ENTRY 2X57' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.491 2 1 1 ? h+k,-k,-l 0.509 # _atom_sites.entry_id 2XDG _atom_sites.fract_transf_matrix[1][1] 0.031598 _atom_sites.fract_transf_matrix[1][2] 0.018243 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.036486 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003483 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_