HEADER TRANSPORT PROTEIN 10-MAY-10 2XE1 TITLE MOLECULAR INSIGHTS INTO CLINICALLY ISOLATED OMPC MUTANTS AND THEIR TITLE 2 ROLE IN MULTI-DRUG RESISTANCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PORIN OMPC, OUTER MEMBRANE PROTEIN 1B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: O6; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 OTHER_DETAILS: O6 UROPATHOGENIC STRAIN KEYWDS TRANSPORT PROTEIN, ION TRANSPORT, PORIN, ANTIBIOTIC RESISTANCE, CELL KEYWDS 2 OUTER MEMBRANE, BETA BARREL, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.A.BAMFORD,J.H.NAISMITH REVDAT 4 20-DEC-23 2XE1 1 REMARK REVDAT 3 16-NOV-11 2XE1 1 JRNL REMARK VERSN REVDAT 2 02-JUN-10 2XE1 1 KEYWDS REVDAT 1 19-MAY-10 2XE1 0 SPRSDE 19-MAY-10 2XE1 2IXX JRNL AUTH H.LOU,M.CHEN,S.S.BLACK,S.R.BUSHELL,M.CECCARELLI,T.MACH, JRNL AUTH 2 K.BEIS,A.S.LOW,V.A.BAMFORD,I.R.BOOTH,H.BAYLEY,J.H.NAISMITH JRNL TITL ALTERED ANTIBIOTIC TRANSPORT IN OMPC MUTANTS ISOLATED FROM A JRNL TITL 2 SERIES OF CLINICAL STRAINS OF MULTI-DRUG RESISTANT E. COLI. JRNL REF PLOS ONE V. 6 25825 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 22053181 JRNL DOI 10.1371/JOURNAL.PONE.0025825 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0060 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1213 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1652 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2775 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.254 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.199 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.471 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2865 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1876 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3875 ; 0.881 ; 1.925 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4533 ; 0.699 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 355 ; 5.368 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;35.041 ;25.062 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 422 ; 9.996 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;11.371 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 391 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3350 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 638 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): -50.7020 30.4690 0.2370 REMARK 3 T TENSOR REMARK 3 T11: 0.1242 T22: 0.1186 REMARK 3 T33: 0.0429 T12: 0.0010 REMARK 3 T13: -0.0372 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.9559 L22: 2.6603 REMARK 3 L33: 1.5250 L12: 1.3518 REMARK 3 L13: -1.4175 L23: -1.3668 REMARK 3 S TENSOR REMARK 3 S11: 0.1361 S12: -0.3144 S13: -0.0173 REMARK 3 S21: 0.3623 S22: -0.1605 S23: 0.0425 REMARK 3 S31: -0.0942 S32: 0.1604 S33: 0.0244 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 133 REMARK 3 ORIGIN FOR THE GROUP (A): -46.7710 22.1630 -6.5880 REMARK 3 T TENSOR REMARK 3 T11: 0.0691 T22: 0.0990 REMARK 3 T33: 0.0700 T12: 0.0162 REMARK 3 T13: -0.0049 T23: 0.0592 REMARK 3 L TENSOR REMARK 3 L11: 0.9526 L22: 0.9517 REMARK 3 L33: 0.3818 L12: 0.0805 REMARK 3 L13: -0.1771 L23: 0.5443 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: -0.1394 S13: -0.1287 REMARK 3 S21: 0.0563 S22: -0.0146 S23: -0.0830 REMARK 3 S31: 0.0475 S32: 0.0529 S33: 0.0125 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 134 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): -48.7390 11.6480 -8.6150 REMARK 3 T TENSOR REMARK 3 T11: 0.0605 T22: 0.0097 REMARK 3 T33: 0.0751 T12: -0.0097 REMARK 3 T13: 0.0409 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 7.8717 L22: 4.1667 REMARK 3 L33: 19.8254 L12: -3.9517 REMARK 3 L13: 10.5094 L23: -7.7463 REMARK 3 S TENSOR REMARK 3 S11: 0.1485 S12: -0.2233 S13: -0.3550 REMARK 3 S21: 0.0605 S22: 0.1609 S23: 0.1232 REMARK 3 S31: 0.0272 S32: -0.3023 S33: -0.3095 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): -44.9730 13.9650 -17.4240 REMARK 3 T TENSOR REMARK 3 T11: 0.0439 T22: 0.0461 REMARK 3 T33: 0.0482 T12: 0.0238 REMARK 3 T13: 0.0052 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.8578 L22: 1.3568 REMARK 3 L33: 1.7977 L12: 0.2904 REMARK 3 L13: 0.6125 L23: -0.0901 REMARK 3 S TENSOR REMARK 3 S11: 0.0732 S12: 0.0738 S13: -0.1130 REMARK 3 S21: -0.0061 S22: -0.0008 S23: -0.1558 REMARK 3 S31: 0.2448 S32: 0.0587 S33: -0.0724 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 221 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7790 27.6790 -12.1220 REMARK 3 T TENSOR REMARK 3 T11: 0.0252 T22: 0.1092 REMARK 3 T33: 0.0916 T12: -0.0042 REMARK 3 T13: -0.0239 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 0.7838 L22: 1.7034 REMARK 3 L33: 1.3656 L12: 0.2891 REMARK 3 L13: 0.2096 L23: 0.7786 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.0135 S13: -0.0871 REMARK 3 S21: -0.0496 S22: -0.0242 S23: -0.2028 REMARK 3 S31: -0.0235 S32: 0.2088 S33: 0.0444 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2XE1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1290043886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22833 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1OSM REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 79.05000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.05000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.05000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 79.05000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 79.05000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 79.05000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -60.20000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 104.26946 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -120.40000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 76 100.13 -161.20 REMARK 500 GLU A 109 -47.99 -134.43 REMARK 500 PHE A 110 -150.34 -92.45 REMARK 500 PHE A 120 -130.24 56.32 REMARK 500 GLN A 123 -135.87 -148.23 REMARK 500 PHE A 136 71.20 38.45 REMARK 500 ASN A 172 48.06 -103.30 REMARK 500 ASP A 298 -88.60 -111.04 REMARK 500 LYS A 304 105.74 -165.87 REMARK 500 ASN A 315 -163.40 -160.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 HEXANE (HEX): MODEL FOR DETERGENT REMARK 600 DECANE (D10): MODEL FOR DETERGENT REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEX A 1355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 1356 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 1357 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XE2 RELATED DB: PDB REMARK 900 MOLECULAR INSIGHTS INTO CLINICALLY ISOLATED OMPC MUTANTS AND THEIR REMARK 900 ROLE IN MULTI-DRUG RESISTANCE REMARK 900 RELATED ID: 2XE3 RELATED DB: PDB REMARK 900 OMPC28 DBREF 2XE1 A 1 354 UNP Q8CVW1 OMPC_ECOL6 22 375 SEQRES 1 A 354 ALA GLU VAL TYR ASN LYS ASP GLY ASN LYS LEU ASP LEU SEQRES 2 A 354 TYR GLY LYS VAL ASP GLY LEU HIS TYR PHE SER ASP ASP SEQRES 3 A 354 LYS SER VAL ASP GLY ASP GLN THR TYR MET ARG LEU GLY SEQRES 4 A 354 PHE LYS GLY GLU THR GLN VAL THR ASP GLN LEU THR GLY SEQRES 5 A 354 TYR GLY GLN TRP GLU TYR GLN ILE GLN GLY ASN ALA PRO SEQRES 6 A 354 GLU SER GLU ASN ASN SER TRP THR ARG VAL ALA PHE ALA SEQRES 7 A 354 GLY LEU LYS PHE GLN ASP ILE GLY SER PHE ASP TYR GLY SEQRES 8 A 354 ARG ASN TYR GLY VAL VAL TYR ASP VAL THR SER TRP THR SEQRES 9 A 354 ASP VAL LEU PRO GLU PHE GLY GLY ASP THR TYR GLY SER SEQRES 10 A 354 ASP ASN PHE MET GLN GLN ARG GLY ASN GLY PHE ALA THR SEQRES 11 A 354 TYR ARG ASN THR ASP PHE PHE GLY LEU VAL ASP GLY LEU SEQRES 12 A 354 ASN PHE ALA VAL GLN TYR GLN GLY GLN ASN GLY SER VAL SEQRES 13 A 354 SER GLY GLU ASN ASP PRO ASP PHE THR GLY HIS GLY ILE SEQRES 14 A 354 THR ASN ASN GLY ARG LYS ALA LEU ARG GLN ASN GLY ASP SEQRES 15 A 354 GLY VAL GLY GLY SER ILE THR TYR ASP TYR GLU GLY PHE SEQRES 16 A 354 GLY VAL GLY ALA ALA VAL SER SER SER LYS ARG THR TRP SEQRES 17 A 354 ASP GLN ASN ASN THR GLY LEU ILE GLY THR GLY ASP ARG SEQRES 18 A 354 ALA GLU THR TYR THR GLY GLY LEU LYS TYR ASP ALA ASN SEQRES 19 A 354 ASN ILE TYR LEU ALA ALA GLN TYR THR GLN THR TYR ASN SEQRES 20 A 354 ALA THR ARG VAL GLY SER LEU GLY TRP ALA ASN LYS ALA SEQRES 21 A 354 GLN ASN PHE GLU ALA VAL ALA GLN TYR GLN PHE ASP PHE SEQRES 22 A 354 GLY LEU ARG PRO SER VAL ALA TYR LEU GLN SER LYS GLY SEQRES 23 A 354 LYS ASN LEU GLY VAL VAL ALA GLY ARG ASN TYR ASP ASP SEQRES 24 A 354 GLU ASP ILE LEU LYS TYR VAL ASP VAL GLY ALA THR TYR SEQRES 25 A 354 TYR PHE ASN LYS ASN MET SER THR TYR VAL ASP TYR LYS SEQRES 26 A 354 ILE ASN LEU LEU ASP ASP ASN GLN PHE THR ARG ALA ALA SEQRES 27 A 354 GLY ILE ASN THR ASP ASP ILE VAL ALA LEU GLY LEU VAL SEQRES 28 A 354 TYR GLN PHE HET D10 A1357 10 HET HEX A1355 6 HET D10 A1356 10 HETNAM D10 DECANE HETNAM HEX HEXANE FORMUL 2 D10 2(C10 H22) FORMUL 3 HEX C6 H14 FORMUL 5 HOH *143(H2 O) HELIX 1 1 VAL A 97 SER A 102 1 6 HELIX 2 2 TRP A 103 ASP A 105 5 3 HELIX 3 3 THR A 134 LEU A 139 1 6 HELIX 4 4 LYS A 175 GLN A 179 5 5 HELIX 5 5 THR A 207 THR A 213 1 7 HELIX 6 6 ASN A 332 GLY A 339 1 8 SHEET 1 AA18 GLU A 2 LYS A 6 0 SHEET 2 AA18 ASN A 9 SER A 24 -1 O ASN A 9 N LYS A 6 SHEET 3 AA18 TYR A 35 GLN A 45 -1 O TYR A 35 N ASP A 18 SHEET 4 AA18 LEU A 50 GLN A 61 -1 O GLY A 52 N THR A 44 SHEET 5 AA18 SER A 71 PHE A 82 -1 O TRP A 72 N GLN A 59 SHEET 6 AA18 GLY A 86 TYR A 94 -1 O GLY A 86 N PHE A 82 SHEET 7 AA18 ARG A 124 ASN A 133 -1 O GLY A 125 N ASN A 93 SHEET 8 AA18 LEU A 143 GLN A 150 -1 O PHE A 145 N ASN A 133 SHEET 9 AA18 GLY A 183 TYR A 192 -1 O GLY A 183 N GLN A 150 SHEET 10 AA18 PHE A 195 LYS A 205 -1 O PHE A 195 N TYR A 192 SHEET 11 AA18 ARG A 221 ALA A 233 -1 O ALA A 222 N SER A 204 SHEET 12 AA18 ILE A 236 TYR A 246 -1 O ILE A 236 N ALA A 233 SHEET 13 AA18 LYS A 259 TYR A 269 -1 O ALA A 260 N THR A 245 SHEET 14 AA18 LEU A 275 LYS A 287 -1 O PRO A 277 N TYR A 269 SHEET 15 AA18 GLU A 300 ASN A 315 -1 O GLU A 300 N GLY A 286 SHEET 16 AA18 MET A 318 ASN A 327 -1 O MET A 318 N PHE A 314 SHEET 17 AA18 ILE A 345 PHE A 354 -1 O ILE A 345 N LYS A 325 SHEET 18 AA18 ASN A 9 SER A 24 -1 O GLY A 15 N PHE A 354 SHEET 1 AB18 GLU A 2 LYS A 6 0 SHEET 2 AB18 ASN A 9 SER A 24 -1 O ASN A 9 N LYS A 6 SHEET 3 AB18 ILE A 345 PHE A 354 -1 O VAL A 346 N PHE A 23 SHEET 4 AB18 MET A 318 ASN A 327 -1 O SER A 319 N VAL A 351 SHEET 5 AB18 GLU A 300 ASN A 315 -1 O VAL A 306 N ILE A 326 SHEET 6 AB18 LEU A 275 LYS A 287 -1 O ARG A 276 N THR A 311 SHEET 7 AB18 LYS A 259 TYR A 269 -1 O LYS A 259 N LYS A 287 SHEET 8 AB18 ILE A 236 TYR A 246 -1 O TYR A 237 N GLN A 268 SHEET 9 AB18 ARG A 221 ALA A 233 -1 O GLU A 223 N TYR A 246 SHEET 10 AB18 PHE A 195 LYS A 205 -1 O GLY A 196 N LYS A 230 SHEET 11 AB18 GLY A 183 TYR A 192 -1 O VAL A 184 N SER A 203 SHEET 12 AB18 LEU A 143 GLN A 150 -1 O ASN A 144 N THR A 189 SHEET 13 AB18 ARG A 124 ASN A 133 -1 O ALA A 129 N TYR A 149 SHEET 14 AB18 GLY A 86 TYR A 94 -1 O SER A 87 N ARG A 132 SHEET 15 AB18 SER A 71 PHE A 82 -1 O ALA A 76 N ARG A 92 SHEET 16 AB18 LEU A 50 GLN A 61 -1 O THR A 51 N LYS A 81 SHEET 17 AB18 TYR A 35 GLN A 45 -1 O MET A 36 N ILE A 60 SHEET 18 AB18 ASN A 9 SER A 24 -1 O LYS A 10 N GLU A 43 SHEET 1 AC 2 ARG A 250 VAL A 251 0 SHEET 2 AC 2 GLY A 255 TRP A 256 -1 O GLY A 255 N VAL A 251 SHEET 1 AD 2 GLY A 290 VAL A 292 0 SHEET 2 AD 2 ARG A 295 TYR A 297 -1 O ARG A 295 N VAL A 292 SITE 1 AC1 1 VAL A 346 SITE 1 AC2 4 PHE A 23 TYR A 90 TYR A 149 LEU A 348 SITE 1 AC3 3 TYR A 269 VAL A 279 VAL A 306 CRYST1 120.400 120.400 158.100 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008306 0.004795 0.000000 0.00000 SCALE2 0.000000 0.009591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006325 0.00000