HEADER TRANSFERASE 30-JUN-10 2XIK TITLE STRUCTURE OF HUMAN YSK1 (YEAST SPS1-STE20-RELATED KINASE 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE PROTEIN KINASE 25; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-293; COMPND 5 SYNONYM: STERILE 20/OXIDANT STRESS-RESPONSE KINASE 1, STE20/OXIDANT COMPND 6 STRESS RESPONSE KINASE 1, SOK-1, STE20-LIKE KINASE; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PNIC-ZB KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,P.RELLOS,E.UGOCHUKWU,M.VOLLMAR,C.ALLERSTON,A.CHAIKUAD, AUTHOR 2 P.SAVITSKY,G.BERRIDGE,B.BRENNER,J.M.ELKINS,N.DAGA,O.GILEADI, AUTHOR 3 P.MAHAJAN,B.SHRESTHA,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 4 J.WEIGELT,C.BOUNTRA,S.KNAPP REVDAT 4 06-NOV-24 2XIK 1 REMARK LINK REVDAT 3 24-JAN-18 2XIK 1 JRNL REVDAT 2 05-DEC-12 2XIK 1 SOURCE KEYWDS AUTHOR JRNL REVDAT 2 2 1 REMARK VERSN REVDAT 1 14-JUL-10 2XIK 0 JRNL AUTH J.R.C.MUNIZ,P.RELLOS,M.VOLLMAR,C.ALLERSTON,A.CHAIKUAD, JRNL AUTH 2 P.SAVITSKY,G.BERRIDGE,B.BRENNER,J.M.ELKINS,N.DAGA,O.GILEADI, JRNL AUTH 3 P.MAHAJAN,B.SHRESTHA,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 4 J.WEIGELT,C.BOUNTRA,S.KNAPP JRNL TITL STRUCTURE OF HUMAN YSK1 (YEAST SPS1-STE20-RELATED KINASE 1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.7.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 23907 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1223 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.06 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2765 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2093 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2618 REMARK 3 BIN R VALUE (WORKING SET) : 0.2058 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.32 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2275 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.76820 REMARK 3 B22 (A**2) : -0.37960 REMARK 3 B33 (A**2) : 1.14780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.20950 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.263 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2390 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3246 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 805 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 48 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 344 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2352 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : 2 ; 0.000 ; HARMONIC REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 312 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2750 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.44 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (A23 - A56) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8022 -14.4318 -17.3640 REMARK 3 T TENSOR REMARK 3 L TENSOR REMARK 3 S TENSOR REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (A57 - A79) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0622 -21.6503 -8.6747 REMARK 3 T TENSOR REMARK 3 T11: -0.1514 T22: -0.0720 REMARK 3 T33: 0.0482 T12: 0.0565 REMARK 3 T13: -0.0444 T23: 0.1092 REMARK 3 L TENSOR REMARK 3 L11: 5.9280 L22: 5.4541 REMARK 3 L33: 2.2395 L12: 0.1264 REMARK 3 L13: 1.2081 L23: -3.0311 REMARK 3 S TENSOR REMARK 3 S11: -0.1277 S12: 0.1729 S13: 0.2252 REMARK 3 S21: -0.1876 S22: 0.0162 S23: -0.4582 REMARK 3 S31: -0.0441 S32: 0.1461 S33: 0.1115 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (A80 - A101) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2665 -19.8296 -16.1182 REMARK 3 T TENSOR REMARK 3 T11: -0.0423 T22: -0.0885 REMARK 3 T33: 0.0263 T12: 0.0799 REMARK 3 T13: -0.0811 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 5.9505 L22: 0.0757 REMARK 3 L33: -0.4074 L12: -1.1736 REMARK 3 L13: -0.6594 L23: -0.9114 REMARK 3 S TENSOR REMARK 3 S11: -0.0982 S12: -0.2983 S13: -0.1289 REMARK 3 S21: -0.1107 S22: 0.0873 S23: -0.5451 REMARK 3 S31: 0.2608 S32: 0.1828 S33: 0.0109 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (A102 - A171) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4954 -14.4993 -14.9123 REMARK 3 T TENSOR REMARK 3 T11: 0.0062 T22: 0.0536 REMARK 3 T33: 0.1373 T12: 0.0431 REMARK 3 T13: -0.0397 T23: 0.0517 REMARK 3 L TENSOR REMARK 3 L11: 3.0650 L22: 0.0000 REMARK 3 L33: -1.6394 L12: -1.8203 REMARK 3 L13: -1.4467 L23: -0.3207 REMARK 3 S TENSOR REMARK 3 S11: 0.0429 S12: -0.0619 S13: -0.0915 REMARK 3 S21: 0.2346 S22: -0.1564 S23: -0.3834 REMARK 3 S31: -0.0606 S32: 0.3942 S33: 0.1135 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (A172 - A271) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9239 -6.5263 -6.5720 REMARK 3 T TENSOR REMARK 3 T11: -0.0798 T22: -0.0704 REMARK 3 T33: -0.0677 T12: 0.0013 REMARK 3 T13: 0.0053 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.6877 L22: 2.1414 REMARK 3 L33: 2.8517 L12: 0.4771 REMARK 3 L13: -0.2915 L23: 0.2304 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: 0.1509 S13: -0.1318 REMARK 3 S21: -0.0223 S22: 0.0610 S23: -0.1136 REMARK 3 S31: 0.0900 S32: 0.0863 S33: -0.0977 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (A272 - A292) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1304 -6.9687 -30.5025 REMARK 3 T TENSOR REMARK 3 T11: -0.1027 T22: -0.0808 REMARK 3 T33: -0.0343 T12: 0.0282 REMARK 3 T13: 0.0256 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.4163 L22: 2.3309 REMARK 3 L33: 2.2829 L12: 0.4807 REMARK 3 L13: -0.1219 L23: 0.2671 REMARK 3 S TENSOR REMARK 3 S11: 0.0923 S12: -0.0021 S13: 0.1840 REMARK 3 S21: 0.1115 S22: 0.0239 S23: 0.0975 REMARK 3 S31: -0.1329 S32: -0.1846 S33: -0.1162 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=TPO XIK. NUMBER REMARK 3 OF ATOMS WITH PROPER CCP4 ATOM TYPE=2436. NUMBER WITH APPROX REMARK 3 DEFAULT CCP4 ATOM TYPE=39. NUMBER TREATED BY BAD NON-BONDED REMARK 3 CONTACTS=1. REMARK 4 REMARK 4 2XIK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1290044411. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97630 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23929 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 52.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M K3(CIT),0.1M BTPROP 8.5, 20% REMARK 280 PEG3350,10% ETGLY REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.28000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 58 REMARK 465 GLU A 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 ASP A 24 CG OD1 OD2 REMARK 470 ILE A 26 CG2 CD1 REMARK 470 LYS A 28 CE NZ REMARK 470 SER A 30 OG REMARK 470 ILE A 38 CD1 REMARK 470 HIS A 41 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 LYS A 90 CE NZ REMARK 470 GLU A 113 CD OE1 OE2 REMARK 470 LYS A 188 CE NZ REMARK 470 GLU A 236 CD OE1 OE2 REMARK 470 LYS A 241 CD CE NZ REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 SER A 292 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 23 -146.58 -118.78 REMARK 500 LYS A 43 -11.64 72.42 REMARK 500 ALA A 56 40.44 -94.35 REMARK 500 SER A 88 -126.45 55.39 REMARK 500 ASP A 140 46.19 -142.91 REMARK 500 ASP A 158 89.07 66.27 REMARK 500 ASP A 193 -149.72 -136.56 REMARK 500 ASP A 193 -150.69 -136.56 REMARK 500 LEU A 251 53.12 -91.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2042 DISTANCE = 6.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1293 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE J60 A 1294 DBREF 2XIK A 1 293 UNP O00506 STK25_HUMAN 1 293 SEQADV 2XIK SER A 0 UNP O00506 EXPRESSION TAG SEQRES 1 A 294 SER MET ALA HIS LEU ARG GLY PHE ALA ASN GLN HIS SER SEQRES 2 A 294 ARG VAL ASP PRO GLU GLU LEU PHE THR LYS LEU ASP ARG SEQRES 3 A 294 ILE GLY LYS GLY SER PHE GLY GLU VAL TYR LYS GLY ILE SEQRES 4 A 294 ASP ASN HIS THR LYS GLU VAL VAL ALA ILE LYS ILE ILE SEQRES 5 A 294 ASP LEU GLU GLU ALA GLU ASP GLU ILE GLU ASP ILE GLN SEQRES 6 A 294 GLN GLU ILE THR VAL LEU SER GLN CYS ASP SER PRO TYR SEQRES 7 A 294 ILE THR ARG TYR PHE GLY SER TYR LEU LYS SER THR LYS SEQRES 8 A 294 LEU TRP ILE ILE MET GLU TYR LEU GLY GLY GLY SER ALA SEQRES 9 A 294 LEU ASP LEU LEU LYS PRO GLY PRO LEU GLU GLU THR TYR SEQRES 10 A 294 ILE ALA THR ILE LEU ARG GLU ILE LEU LYS GLY LEU ASP SEQRES 11 A 294 TYR LEU HIS SER GLU ARG LYS ILE HIS ARG ASP ILE LYS SEQRES 12 A 294 ALA ALA ASN VAL LEU LEU SER GLU GLN GLY ASP VAL LYS SEQRES 13 A 294 LEU ALA ASP PHE GLY VAL ALA GLY GLN LEU THR ASP THR SEQRES 14 A 294 GLN ILE LYS ARG ASN TPO PHE VAL GLY THR PRO PHE TRP SEQRES 15 A 294 MET ALA PRO GLU VAL ILE LYS GLN SER ALA TYR ASP PHE SEQRES 16 A 294 LYS ALA ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 17 A 294 LEU ALA LYS GLY GLU PRO PRO ASN SER ASP LEU HIS PRO SEQRES 18 A 294 MET ARG VAL LEU PHE LEU ILE PRO LYS ASN SER PRO PRO SEQRES 19 A 294 THR LEU GLU GLY GLN HIS SER LYS PRO PHE LYS GLU PHE SEQRES 20 A 294 VAL GLU ALA CYS LEU ASN LYS ASP PRO ARG PHE ARG PRO SEQRES 21 A 294 THR ALA LYS GLU LEU LEU LYS HIS LYS PHE ILE THR ARG SEQRES 22 A 294 TYR THR LYS LYS THR SER PHE LEU THR GLU LEU ILE ASP SEQRES 23 A 294 ARG TYR LYS ARG TRP LYS SER GLU MODRES 2XIK TPO A 174 THR PHOSPHOTHREONINE HET TPO A 174 11 HET EDO A1293 4 HET J60 A1294 29 HETNAM TPO PHOSPHOTHREONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM J60 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE) HETNAM 2 J60 METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H- HETNAM 3 J60 PYRROLE-3-CARBOXAMIDE HETSYN TPO PHOSPHONOTHREONINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 EDO C2 H6 O2 FORMUL 3 J60 C22 H27 CL N4 O2 FORMUL 4 HOH *148(H2 O) HELIX 1 1 PHE A 7 HIS A 11 5 5 HELIX 2 2 ASP A 15 LEU A 19 1 5 HELIX 3 3 GLU A 59 CYS A 73 1 15 HELIX 4 4 ALA A 103 LYS A 108 1 6 HELIX 5 5 GLU A 113 GLU A 134 1 22 HELIX 6 6 LYS A 142 ALA A 144 5 3 HELIX 7 7 THR A 178 MET A 182 5 5 HELIX 8 8 ALA A 183 LYS A 188 1 6 HELIX 9 9 PHE A 194 GLY A 211 1 18 HELIX 10 10 HIS A 219 ILE A 227 1 9 HELIX 11 11 SER A 240 LEU A 251 1 12 HELIX 12 12 ASP A 254 ARG A 258 5 5 HELIX 13 13 THR A 260 LEU A 265 1 6 HELIX 14 14 HIS A 267 TYR A 273 1 7 HELIX 15 15 LYS A 276 PHE A 279 5 4 HELIX 16 16 LEU A 280 SER A 292 1 13 SHEET 1 AA 5 PHE A 20 LYS A 28 0 SHEET 2 AA 5 GLY A 32 ASP A 39 -1 O VAL A 34 N ILE A 26 SHEET 3 AA 5 VAL A 45 ASP A 52 -1 O VAL A 46 N GLY A 37 SHEET 4 AA 5 LYS A 90 GLU A 96 -1 O LEU A 91 N ILE A 51 SHEET 5 AA 5 TYR A 81 LYS A 87 -1 N PHE A 82 O ILE A 94 SHEET 1 AB 3 GLY A 101 SER A 102 0 SHEET 2 AB 3 VAL A 146 LEU A 148 -1 N LEU A 148 O GLY A 101 SHEET 3 AB 3 VAL A 154 LEU A 156 -1 O LYS A 155 N LEU A 147 SHEET 1 AC 2 LYS A 136 ILE A 137 0 SHEET 2 AC 2 GLY A 163 GLN A 164 -1 O GLY A 163 N ILE A 137 LINK C ASN A 173 N TPO A 174 1555 1555 1.34 LINK C TPO A 174 N PHE A 175 1555 1555 1.35 SITE 1 AC1 5 ARG A 122 LYS A 126 LEU A 265 ILE A 270 SITE 2 AC1 5 HOH A2146 SITE 1 AC2 11 ARG A 25 ILE A 26 ALA A 47 GLU A 96 SITE 2 AC2 11 TYR A 97 LEU A 98 ASP A 105 LYS A 108 SITE 3 AC2 11 LEU A 147 TYR A 287 HOH A2147 CRYST1 57.080 48.560 67.570 90.00 113.78 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017519 0.000000 0.007720 0.00000 SCALE2 0.000000 0.020593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016173 0.00000