HEADER IMMUNE SYSTEM 11-OCT-10 2XTP TITLE CRYSTAL STRUCTURE OF NUCLEOTIDE-FREE HUMAN GIMAP2, AMINO ACID RESIDUES TITLE 2 1-260 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE IMAP FAMILY MEMBER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-260; COMPND 5 SYNONYM: IMMUNITY-ASSOCIATED PROTEIN 2, HIMAP2, GIMAP2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P1 KEYWDS IMMUNE SYSTEM, G PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.SCHWEFEL,C.FROEHLICH,O.DAUMKE REVDAT 5 13-NOV-24 2XTP 1 LINK REVDAT 4 08-DEC-10 2XTP 1 JRNL REVDAT 3 24-NOV-10 2XTP 1 JRNL REVDAT 2 17-NOV-10 2XTP 1 JRNL REVDAT 1 20-OCT-10 2XTP 0 JRNL AUTH D.SCHWEFEL,C.FROEHLICH,J.EICHHORST,B.WIESNER,J.BEHLKE, JRNL AUTH 2 L.ARAVIND,O.DAUMKE JRNL TITL STRUCTURAL BASIS OF OLIGOMERIZATION IN SEPTIN-LIKE GTPASE OF JRNL TITL 2 IMMUNITY-ASSOCIATED PROTEIN 2 (GIMAP2) JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 20299 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 21059949 JRNL DOI 10.1073/PNAS.1010322107 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.SCHWEFEL,C.FROHLICH,O.DAUMKE REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X- RAY REMARK 1 TITL 2 ANALYSIS OF HUMAN GIMAP2. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 66 725 2010 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 20516611 REMARK 1 DOI 10.1107/S174430911001537X REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2085 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2817 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1712 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 179 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.64000 REMARK 3 B22 (A**2) : -0.83000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.353 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1797 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2431 ; 1.161 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 241 ; 4.904 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;31.406 ;24.684 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 344 ;11.651 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.154 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1332 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1121 ; 0.671 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1804 ; 1.287 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 676 ; 2.238 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 616 ; 3.481 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 43 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0923 49.5628 8.4488 REMARK 3 T TENSOR REMARK 3 T11: 0.0267 T22: 0.0147 REMARK 3 T33: 0.0197 T12: 0.0048 REMARK 3 T13: -0.0039 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.7952 L22: 0.3599 REMARK 3 L33: 0.6408 L12: 0.2423 REMARK 3 L13: 0.1947 L23: -0.1766 REMARK 3 S TENSOR REMARK 3 S11: 0.0272 S12: 0.0097 S13: -0.0452 REMARK 3 S21: -0.0036 S22: 0.0210 S23: -0.0311 REMARK 3 S31: -0.0446 S32: -0.0164 S33: -0.0483 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0515 54.8041 10.1244 REMARK 3 T TENSOR REMARK 3 T11: 0.0279 T22: 0.0046 REMARK 3 T33: 0.0235 T12: 0.0076 REMARK 3 T13: 0.0041 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.8855 L22: 0.8568 REMARK 3 L33: 1.5097 L12: 0.2195 REMARK 3 L13: 0.0108 L23: 0.7048 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.0293 S13: 0.0835 REMARK 3 S21: -0.0184 S22: 0.0157 S23: 0.0887 REMARK 3 S31: -0.0767 S32: 0.0274 S33: -0.0332 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 219 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3776 42.8102 13.9628 REMARK 3 T TENSOR REMARK 3 T11: 0.0145 T22: 0.0066 REMARK 3 T33: 0.0123 T12: -0.0053 REMARK 3 T13: -0.0007 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.4786 L22: 0.5549 REMARK 3 L33: 0.3927 L12: -0.1446 REMARK 3 L13: 0.0186 L23: 0.0254 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: -0.0298 S13: -0.0362 REMARK 3 S21: 0.0084 S22: -0.0194 S23: -0.0077 REMARK 3 S31: 0.0150 S32: 0.0138 S33: 0.0067 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 220 A 254 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0248 48.6878 27.0020 REMARK 3 T TENSOR REMARK 3 T11: 0.1592 T22: 0.1103 REMARK 3 T33: 0.1032 T12: -0.0240 REMARK 3 T13: 0.1204 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 9.7067 L22: 3.6120 REMARK 3 L33: 4.2000 L12: -2.3106 REMARK 3 L13: 1.3695 L23: -0.1229 REMARK 3 S TENSOR REMARK 3 S11: 0.1602 S12: -0.4049 S13: 0.3494 REMARK 3 S21: 0.5161 S22: -0.1793 S23: 0.2567 REMARK 3 S31: 0.0256 S32: -0.2959 S33: 0.0191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2XTP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1290045733. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797, 0.9849 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 183804 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-12% 2-PROPANOL, 15% GLYCEROL, PH REMARK 280 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.69000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.45500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.69000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.45500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 HIS A 8 REMARK 465 TRP A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 HIS A 12 REMARK 465 ALA A 13 REMARK 465 LYS A 14 REMARK 465 GLY A 15 REMARK 465 GLN A 16 REMARK 465 CYS A 17 REMARK 465 ALA A 18 REMARK 465 SER A 19 REMARK 465 ARG A 20 REMARK 465 GLN A 223 REMARK 465 ARG A 224 REMARK 465 SER A 225 REMARK 465 LYS A 226 REMARK 465 CYS A 227 REMARK 465 GLY A 228 REMARK 465 PRO A 229 REMARK 465 VAL A 230 REMARK 465 GLY A 231 REMARK 465 SER A 232 REMARK 465 ASP A 233 REMARK 465 GLU A 234 REMARK 465 ARG A 235 REMARK 465 ALA A 255 REMARK 465 LEU A 256 REMARK 465 ALA A 257 REMARK 465 GLU A 258 REMARK 465 ALA A 259 REMARK 465 ASN A 260 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 86 CG OD1 OD2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 LYS A 245 CD CE NZ REMARK 470 GLU A 248 OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 97 O HOH A 2080 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XTN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GTP-BOUND HUMAN GIMAP2, AMINO ACID RESIDUES 1- REMARK 900 234 REMARK 900 RELATED ID: 2XTO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GDP-BOUND HUMAN GIMAP2, AMINO ACID RESIDUES 21- REMARK 900 260 REMARK 900 RELATED ID: 2XTM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GDP-BOUND HUMAN GIMAP2, AMINO ACID RESIDUES 1- REMARK 900 234 DBREF 2XTP A 1 260 UNP Q9UG22 GIMA2_HUMAN 1 260 SEQRES 1 A 260 MSE ASP GLN ASN GLU HIS SER HIS TRP GLY PRO HIS ALA SEQRES 2 A 260 LYS GLY GLN CYS ALA SER ARG SER GLU LEU ARG ILE ILE SEQRES 3 A 260 LEU VAL GLY LYS THR GLY THR GLY LYS SER ALA ALA GLY SEQRES 4 A 260 ASN SER ILE LEU ARG LYS GLN ALA PHE GLU SER LYS LEU SEQRES 5 A 260 GLY SER GLN THR LEU THR LYS THR CYS SER LYS SER GLN SEQRES 6 A 260 GLY SER TRP GLY ASN ARG GLU ILE VAL ILE ILE ASP THR SEQRES 7 A 260 PRO ASP MSE PHE SER TRP LYS ASP HIS CYS GLU ALA LEU SEQRES 8 A 260 TYR LYS GLU VAL GLN ARG CYS TYR LEU LEU SER ALA PRO SEQRES 9 A 260 GLY PRO HIS VAL LEU LEU LEU VAL THR GLN LEU GLY ARG SEQRES 10 A 260 TYR THR SER GLN ASP GLN GLN ALA ALA GLN ARG VAL LYS SEQRES 11 A 260 GLU ILE PHE GLY GLU ASP ALA MSE GLY HIS THR ILE VAL SEQRES 12 A 260 LEU PHE THR HIS LYS GLU ASP LEU ASN GLY GLY SER LEU SEQRES 13 A 260 MSE ASP TYR MSE HIS ASP SER ASP ASN LYS ALA LEU SER SEQRES 14 A 260 LYS LEU VAL ALA ALA CYS GLY GLY ARG ILE CYS ALA PHE SEQRES 15 A 260 ASN ASN ARG ALA GLU GLY SER ASN GLN ASP ASP GLN VAL SEQRES 16 A 260 LYS GLU LEU MSE ASP CYS ILE GLU ASP LEU LEU MSE GLU SEQRES 17 A 260 LYS ASN GLY ASP HIS TYR THR ASN GLY LEU TYR SER LEU SEQRES 18 A 260 ILE GLN ARG SER LYS CYS GLY PRO VAL GLY SER ASP GLU SEQRES 19 A 260 ARG VAL LYS GLU PHE LYS GLN SER LEU ILE LYS TYR MSE SEQRES 20 A 260 GLU THR GLN ARG SER TYR THR ALA LEU ALA GLU ALA ASN MODRES 2XTP MSE A 81 MET SELENOMETHIONINE MODRES 2XTP MSE A 138 MET SELENOMETHIONINE MODRES 2XTP MSE A 157 MET SELENOMETHIONINE MODRES 2XTP MSE A 160 MET SELENOMETHIONINE MODRES 2XTP MSE A 199 MET SELENOMETHIONINE MODRES 2XTP MSE A 207 MET SELENOMETHIONINE MODRES 2XTP MSE A 247 MET SELENOMETHIONINE HET MSE A 81 8 HET MSE A 138 8 HET MSE A 157 13 HET MSE A 160 8 HET MSE A 199 8 HET MSE A 207 8 HET MSE A 247 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 HOH *179(H2 O) HELIX 1 1 GLY A 34 ARG A 44 1 11 HELIX 2 2 PRO A 79 TRP A 84 5 6 HELIX 3 3 CYS A 88 ALA A 103 1 16 HELIX 4 4 THR A 119 GLY A 134 1 16 HELIX 5 5 GLU A 135 GLY A 139 5 5 HELIX 6 6 HIS A 147 ASN A 152 5 6 HELIX 7 7 SER A 155 SER A 163 1 9 HELIX 8 8 ASN A 165 CYS A 175 1 11 HELIX 9 9 GLU A 187 LYS A 209 1 23 HELIX 10 10 ASN A 216 ILE A 222 1 7 HELIX 11 11 VAL A 236 THR A 254 1 19 SHEET 1 AA 6 SER A 62 TRP A 68 0 SHEET 2 AA 6 ARG A 71 ASP A 77 -1 O ARG A 71 N TRP A 68 SHEET 3 AA 6 LEU A 23 GLY A 29 1 O LEU A 23 N VAL A 74 SHEET 4 AA 6 VAL A 108 GLN A 114 1 O VAL A 108 N ILE A 26 SHEET 5 AA 6 THR A 141 THR A 146 1 O ILE A 142 N LEU A 111 SHEET 6 AA 6 ILE A 179 ALA A 181 1 O CYS A 180 N PHE A 145 LINK C ASP A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N PHE A 82 1555 1555 1.34 LINK C ALA A 137 N MSE A 138 1555 1555 1.34 LINK C MSE A 138 N GLY A 139 1555 1555 1.33 LINK C LEU A 156 N MSE A 157 1555 1555 1.34 LINK C MSE A 157 N ASP A 158 1555 1555 1.33 LINK C TYR A 159 N MSE A 160 1555 1555 1.33 LINK C MSE A 160 N HIS A 161 1555 1555 1.33 LINK C LEU A 198 N MSE A 199 1555 1555 1.34 LINK C MSE A 199 N ASP A 200 1555 1555 1.34 LINK C LEU A 206 N MSE A 207 1555 1555 1.33 LINK C MSE A 207 N GLU A 208 1555 1555 1.33 LINK C TYR A 246 N MSE A 247 1555 1555 1.34 LINK C MSE A 247 N GLU A 248 1555 1555 1.33 CISPEP 1 ALA A 103 PRO A 104 0 6.34 CRYST1 57.380 60.910 72.020 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017428 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013885 0.00000