HEADER TRANSCRIPTION 17-NOV-10 2XYI TITLE CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH A H4 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE HISTONE-BINDING PROTEIN CAF1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHROMATIN ASSEMBLY FACTOR 1 P55 SUBUNIT, CAF-1 P55 SUBUNIT, COMPND 5 NUCLEOSOME-REMODELING FACTOR 55 KDA SUBUNIT, NURF-55; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE H4; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: RESIDUES 27-46; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBACHT; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 14 ORGANISM_TAXID: 7227 KEYWDS TRANSCRIPTION, REPRESSOR, PHOSPHOPROTEIN, WD-REPEAT EXPDTA X-RAY DIFFRACTION AUTHOR C.U.STIRNIMANN,A.J.NOWAK,C.W.MUELLER REVDAT 6 20-DEC-23 2XYI 1 REMARK REVDAT 5 09-OCT-19 2XYI 1 REMARK REVDAT 4 24-APR-19 2XYI 1 SOURCE REMARK REVDAT 3 06-JUL-11 2XYI 1 JRNL REVDAT 2 01-JUN-11 2XYI 1 JRNL REVDAT 1 04-MAY-11 2XYI 0 JRNL AUTH A.J.NOWAK,C.ALFIERI,C.U.STIRNIMANN,V.RYBIN,F.BAUDIN, JRNL AUTH 2 N.LY-HARTIG,D.LINDNER,C.W.MULLER JRNL TITL CHROMATIN-MODIFYING COMPLEX COMPONENT NURF55/P55 ASSOCIATES JRNL TITL 2 WITH HISTONES H3, H4 AND POLYCOMB REPRESSIVE COMPLEX 2 JRNL TITL 3 SUBUNIT SU(Z)12 THROUGH PARTIALLY OVERLAPPING BINDING SITES. JRNL REF J.BIOL.CHEM. V. 286 23388 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21550984 JRNL DOI 10.1074/JBC.M110.207407 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 46467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.3990 - 4.1088 0.99 3540 148 0.1590 0.1724 REMARK 3 2 4.1088 - 3.2638 0.99 3487 145 0.1382 0.1737 REMARK 3 3 3.2638 - 2.8519 0.99 3469 145 0.1625 0.2118 REMARK 3 4 2.8519 - 2.5915 0.99 3465 144 0.1523 0.1939 REMARK 3 5 2.5915 - 2.4059 0.99 3444 144 0.1615 0.1672 REMARK 3 6 2.4059 - 2.2642 0.98 3402 142 0.1598 0.2235 REMARK 3 7 2.2642 - 2.1508 0.98 3424 142 0.1564 0.1980 REMARK 3 8 2.1508 - 2.0573 0.98 3402 142 0.1562 0.1799 REMARK 3 9 2.0573 - 1.9781 0.98 3429 143 0.1659 0.2030 REMARK 3 10 1.9781 - 1.9099 0.98 3390 141 0.1712 0.2344 REMARK 3 11 1.9099 - 1.8502 0.98 3392 141 0.1742 0.2311 REMARK 3 12 1.8502 - 1.7973 0.97 3390 142 0.1914 0.1992 REMARK 3 13 1.7973 - 1.7500 0.97 3374 140 0.2157 0.2637 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 56.22 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.050 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86040 REMARK 3 B22 (A**2) : -4.75430 REMARK 3 B33 (A**2) : 0.31300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.07870 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3418 REMARK 3 ANGLE : 0.971 4647 REMARK 3 CHIRALITY : 0.068 501 REMARK 3 PLANARITY : 0.004 602 REMARK 3 DIHEDRAL : 15.998 1275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2XYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1290041971. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0085 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46472 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3C99 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35%(V/V) PEG 400, 100MM MES PH 6, REMARK 280 VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.60500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ASP A 3 REMARK 465 ARG A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 ASN A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 GLU A 10 REMARK 465 SER A 92 REMARK 465 GLU A 93 REMARK 465 ASP A 94 REMARK 465 ALA A 95 REMARK 465 GLN A 96 REMARK 465 PHE A 97 REMARK 465 ASP A 98 REMARK 465 GLY A 99 REMARK 465 SER A 100 REMARK 465 HIS A 101 REMARK 465 TYR A 102 REMARK 465 ASP A 103 REMARK 465 ASN A 104 REMARK 465 GLU A 105 REMARK 465 LYS A 106 REMARK 465 GLY A 107 REMARK 465 GLU A 108 REMARK 465 PHE A 109 REMARK 465 GLY A 110 REMARK 465 GLY A 111 REMARK 465 PHE A 112 REMARK 465 GLY A 113 REMARK 465 SER A 114 REMARK 465 VAL A 115 REMARK 465 CYS A 116 REMARK 465 GLY A 117 REMARK 465 GLU A 416 REMARK 465 GLU A 417 REMARK 465 PRO A 418 REMARK 465 GLU A 419 REMARK 465 ILE A 420 REMARK 465 PRO A 421 REMARK 465 ALA A 422 REMARK 465 SER A 423 REMARK 465 GLU A 424 REMARK 465 LEU A 425 REMARK 465 GLU A 426 REMARK 465 THR A 427 REMARK 465 ASN A 428 REMARK 465 THR A 429 REMARK 465 ALA A 430 REMARK 465 ILE B 26 REMARK 465 GLN B 27 REMARK 465 GLY B 28 REMARK 465 ILE B 29 REMARK 465 LYS B 44 REMARK 465 ARG B 45 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 18 CD OE1 OE2 REMARK 480 LYS A 29 NZ REMARK 480 LYS A 30 CE NZ REMARK 480 LYS A 59 CG CD CE NZ REMARK 480 GLN A 60 CA C O CB CG OE1 NE2 REMARK 480 ASP A 61 N CB CG OD1 OD2 REMARK 480 LYS A 63 CD CE NZ REMARK 480 ASP A 78 CA CG OD1 OD2 REMARK 480 GLU A 79 CD OE1 OE2 REMARK 480 LYS A 118 CG CD CE NZ REMARK 480 GLU A 120 CG CD OE1 OE2 REMARK 480 LYS A 160 NZ REMARK 480 LYS A 164 CG CD CE NZ REMARK 480 ASN A 264 CB CG OD1 ND2 REMARK 480 LYS A 268 CG CD CE NZ REMARK 480 LYS A 311 CD CE NZ REMARK 480 LEU A 312 CG CD1 CD2 REMARK 480 LYS A 321 CE NZ REMARK 480 GLU A 364 CD OE1 OE2 REMARK 480 LYS A 380 NZ REMARK 480 LYS B 31 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 77 -76.63 -82.02 REMARK 500 HIS A 204 9.11 82.33 REMARK 500 ASN A 309 85.24 -155.02 REMARK 500 SER A 319 -36.98 166.05 REMARK 500 SER A 319 -39.66 168.22 REMARK 500 ARG A 344 -1.91 73.68 REMARK 500 ARG A 344 -3.53 73.68 REMARK 500 ASN A 401 -6.92 89.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A2008 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A2009 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A2012 DISTANCE = 8.05 ANGSTROMS REMARK 525 HOH A2148 DISTANCE = 5.97 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 PG4 A 1418 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1420 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PYO RELATED DB: PDB REMARK 900 DROSOPHILA NUCLEOSOME CORE REMARK 900 RELATED ID: 3C9C RELATED DB: PDB REMARK 900 STRUCTURAL BASIS OF HISTONE H4 RECOGNITION BY P55 REMARK 900 RELATED ID: 3C99 RELATED DB: PDB REMARK 900 STRUCTURAL BASIS OF HISTONE H4 RECOGNITION BY P55 DBREF 2XYI A 1 430 UNP Q24572 CAF1_DROME 1 430 DBREF 2XYI B 26 45 UNP P84040 H4_DROME 27 46 SEQRES 1 A 430 MET VAL ASP ARG SER ASP ASN ALA ALA GLU SER PHE ASP SEQRES 2 A 430 ASP ALA VAL GLU GLU ARG VAL ILE ASN GLU GLU TYR LYS SEQRES 3 A 430 ILE TRP LYS LYS ASN THR PRO PHE LEU TYR ASP LEU VAL SEQRES 4 A 430 MET THR HIS ALA LEU GLU TRP PRO SER LEU THR ALA GLN SEQRES 5 A 430 TRP LEU PRO ASP VAL THR LYS GLN ASP GLY LYS ASP TYR SEQRES 6 A 430 SER VAL HIS ARG LEU ILE LEU GLY THR HIS THR SER ASP SEQRES 7 A 430 GLU GLN ASN HIS LEU LEU ILE ALA SER VAL GLN LEU PRO SEQRES 8 A 430 SER GLU ASP ALA GLN PHE ASP GLY SER HIS TYR ASP ASN SEQRES 9 A 430 GLU LYS GLY GLU PHE GLY GLY PHE GLY SER VAL CYS GLY SEQRES 10 A 430 LYS ILE GLU ILE GLU ILE LYS ILE ASN HIS GLU GLY GLU SEQRES 11 A 430 VAL ASN ARG ALA ARG TYR MET PRO GLN ASN ALA CYS VAL SEQRES 12 A 430 ILE ALA THR LYS THR PRO SER SER ASP VAL LEU VAL PHE SEQRES 13 A 430 ASP TYR THR LYS HIS PRO SER LYS PRO GLU PRO SER GLY SEQRES 14 A 430 GLU CYS GLN PRO ASP LEU ARG LEU ARG GLY HIS GLN LYS SEQRES 15 A 430 GLU GLY TYR GLY LEU SER TRP ASN PRO ASN LEU ASN GLY SEQRES 16 A 430 TYR LEU LEU SER ALA SER ASP ASP HIS THR ILE CYS LEU SEQRES 17 A 430 TRP ASP ILE ASN ALA THR PRO LYS GLU HIS ARG VAL ILE SEQRES 18 A 430 ASP ALA LYS ASN ILE PHE THR GLY HIS THR ALA VAL VAL SEQRES 19 A 430 GLU ASP VAL ALA TRP HIS LEU LEU HIS GLU SER LEU PHE SEQRES 20 A 430 GLY SER VAL ALA ASP ASP GLN LYS LEU MET ILE TRP ASP SEQRES 21 A 430 THR ARG ASN ASN ASN THR SER LYS PRO SER HIS THR VAL SEQRES 22 A 430 ASP ALA HIS THR ALA GLU VAL ASN CYS LEU SER PHE ASN SEQRES 23 A 430 PRO TYR SER GLU PHE ILE LEU ALA THR GLY SER ALA ASP SEQRES 24 A 430 LYS THR VAL ALA LEU TRP ASP LEU ARG ASN LEU LYS LEU SEQRES 25 A 430 LYS LEU HIS SER PHE GLU SER HIS LYS ASP GLU ILE PHE SEQRES 26 A 430 GLN VAL GLN TRP SER PRO HIS ASN GLU THR ILE LEU ALA SEQRES 27 A 430 SER SER GLY THR ASP ARG ARG LEU HIS VAL TRP ASP LEU SEQRES 28 A 430 SER LYS ILE GLY GLU GLU GLN SER THR GLU ASP ALA GLU SEQRES 29 A 430 ASP GLY PRO PRO GLU LEU LEU PHE ILE HIS GLY GLY HIS SEQRES 30 A 430 THR ALA LYS ILE SER ASP PHE SER TRP ASN PRO ASN GLU SEQRES 31 A 430 PRO TRP ILE ILE CYS SER VAL SER GLU ASP ASN ILE MET SEQRES 32 A 430 GLN VAL TRP GLN MET ALA GLU ASN VAL TYR ASN ASP GLU SEQRES 33 A 430 GLU PRO GLU ILE PRO ALA SER GLU LEU GLU THR ASN THR SEQRES 34 A 430 ALA SEQRES 1 B 20 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 2 B 20 ARG ARG GLY GLY VAL LYS ARG HET PG4 A1416 26 HET PEG A1417 7 HET PG4 A1418 13 HET PG4 A1419 13 HET PEG A1420 7 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 PG4 3(C8 H18 O5) FORMUL 4 PEG 2(C4 H10 O3) FORMUL 8 HOH *398(H2 O) HELIX 1 1 SER A 11 LEU A 35 1 25 HELIX 2 2 THR A 159 HIS A 161 5 3 HELIX 3 3 SER A 352 ILE A 354 5 3 HELIX 4 4 SER A 359 GLY A 366 1 8 HELIX 5 5 ALA A 409 ASN A 414 1 6 HELIX 6 6 THR B 30 ARG B 40 1 11 SHEET 1 AA 4 TYR A 36 ALA A 43 0 SHEET 2 AA 4 ILE A 402 MET A 408 -1 O MET A 403 N HIS A 42 SHEET 3 AA 4 ILE A 393 SER A 398 -1 O ILE A 394 N TRP A 406 SHEET 4 AA 4 ILE A 381 TRP A 386 -1 N SER A 382 O VAL A 397 SHEET 1 AB 2 ALA A 51 TRP A 53 0 SHEET 2 AB 2 SER A 66 GLY A 73 -1 O ILE A 71 N GLN A 52 SHEET 1 AC 2 THR A 58 LYS A 59 0 SHEET 2 AC 2 SER A 66 GLY A 73 -1 O VAL A 67 N THR A 58 SHEET 1 AD 4 ILE A 119 HIS A 127 0 SHEET 2 AD 4 ASN A 81 LEU A 90 -1 O ASN A 81 N HIS A 127 SHEET 3 AD 4 SER A 66 GLY A 73 -1 O SER A 66 N LEU A 90 SHEET 4 AD 4 THR A 58 LYS A 59 -1 O THR A 58 N VAL A 67 SHEET 1 AE 4 ILE A 119 HIS A 127 0 SHEET 2 AE 4 ASN A 81 LEU A 90 -1 O ASN A 81 N HIS A 127 SHEET 3 AE 4 SER A 66 GLY A 73 -1 O SER A 66 N LEU A 90 SHEET 4 AE 4 ALA A 51 TRP A 53 -1 O GLN A 52 N ILE A 71 SHEET 1 AF 5 ARG A 133 MET A 137 0 SHEET 2 AF 5 ASN A 140 LYS A 147 -1 N ASN A 140 O MET A 137 SHEET 3 AF 5 VAL A 153 ASP A 157 -1 O LEU A 154 N THR A 146 SHEET 4 AF 5 LEU A 175 ARG A 178 -1 O LEU A 175 N VAL A 155 SHEET 5 AF 5 VAL A 220 ASP A 222 1 O ILE A 221 N ARG A 178 SHEET 1 AG 4 LEU A 187 TRP A 189 0 SHEET 2 AG 4 TYR A 196 ALA A 200 -1 O LEU A 198 N SER A 188 SHEET 3 AG 4 ILE A 206 ASP A 210 -1 O CYS A 207 N SER A 199 SHEET 4 AG 4 ASN A 225 PHE A 227 -1 O ASN A 225 N LEU A 208 SHEET 1 AH 4 VAL A 234 TRP A 239 0 SHEET 2 AH 4 LEU A 246 ALA A 251 -1 O GLY A 248 N ALA A 238 SHEET 3 AH 4 LYS A 255 ASP A 260 -1 O LYS A 255 N ALA A 251 SHEET 4 AH 4 HIS A 271 ASP A 274 -1 O HIS A 271 N ILE A 258 SHEET 1 AI 4 VAL A 280 PHE A 285 0 SHEET 2 AI 4 ILE A 292 SER A 297 -1 O ALA A 294 N SER A 284 SHEET 3 AI 4 THR A 301 ASP A 306 -1 O THR A 301 N SER A 297 SHEET 4 AI 4 HIS A 315 GLU A 318 -1 O HIS A 315 N LEU A 304 SHEET 1 AJ 4 ILE A 324 TRP A 329 0 SHEET 2 AJ 4 ILE A 336 GLY A 341 -1 O ALA A 338 N GLN A 328 SHEET 3 AJ 4 HIS A 347 ASP A 350 -1 O HIS A 347 N SER A 339 SHEET 4 AJ 4 LEU A 370 ILE A 373 -1 N LEU A 371 O VAL A 348 SITE 1 AC1 10 TYR A 185 ASP A 202 GLU A 235 ASP A 252 SITE 2 AC1 10 PHE A 325 HOH A2225 HOH A2263 HOH A2264 SITE 3 AC1 10 HOH A2390 HOH A2391 SITE 1 AC2 1 HOH A2136 SITE 1 AC3 4 LYS A 313 HIS A 315 SER A 316 GLU A 318 SITE 1 AC4 6 HIS A 240 HIS A 243 GLU A 290 PHE A 291 SITE 2 AC4 6 LEU A 307 HOH A2393 SITE 1 AC5 2 LEU A 314 HOH A2358 CRYST1 61.510 59.210 65.890 90.00 99.83 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016258 0.000000 0.002817 0.00000 SCALE2 0.000000 0.016889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015403 0.00000