HEADER MEMBRANE PROTEIN 07-DEC-10 2Y0Q TITLE THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN TRANSMEMBRANE TITLE 2 RECEPTORS - THE A291C MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: HAMP DOMAIN, RESIDUES 278-331; COMPND 5 SYNONYM: AF1503; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: GST-FUSION; SOURCE 9 OTHER_DETAILS: GENOMIC DNA KEYWDS MEMBRANE PROTEIN, TRANSMEMBRANE SIGNALLING EXPDTA X-RAY DIFFRACTION AUTHOR K.ZETH,H.U.FERRIS,M.HULKO,A.N.LUPAS REVDAT 2 16-NOV-11 2Y0Q 1 JRNL REMARK REVDAT 1 30-MAR-11 2Y0Q 0 JRNL AUTH H.U.FERRIS,S.DUNIN-HORKAWICZ,L.G.MONDEJAR,M.HULKO,K.HANTKE, JRNL AUTH 2 J.MARTIN,J.E.SCHULTZ,K.ZETH,A.N.LUPAS,M.COLES JRNL TITL THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN TRANSMEMBRANE JRNL TITL 2 RECEPTORS. JRNL REF STRUCTURE V. 19 378 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21397188 JRNL DOI 10.1016/J.STR.2011.01.006 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 100.00 REMARK 3 NUMBER OF REFLECTIONS : 10902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.21818 REMARK 3 R VALUE (WORKING SET) : 0.21541 REMARK 3 FREE R VALUE : 0.26939 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 573 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.000 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.052 REMARK 3 REFLECTION IN BIN (WORKING SET) : 795 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.195 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.273 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1590 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 125 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.675 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15 REMARK 3 B22 (A**2) : 0.99 REMARK 3 B33 (A**2) : -1.15 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.285 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.217 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1601 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2158 ; 1.314 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 205 ; 5.498 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;29.039 ;23.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 323 ;16.445 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.646 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 264 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1156 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1020 ; 0.510 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1655 ; 0.906 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 581 ; 1.516 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 500 ; 2.519 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 50 4 REMARK 3 1 B 3 B 50 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 369 ; 0.40 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 369 ; 0.40 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 369 ; 0.56 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 369 ; 0.56 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 3 C 50 4 REMARK 3 1 D 3 D 50 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 C (A): 360 ; 0.48 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 D (A): 360 ; 0.48 ; 0.50 REMARK 3 MEDIUM THERMAL 2 C (A**2): 360 ; 0.64 ; 2.00 REMARK 3 MEDIUM THERMAL 2 D (A**2): 360 ; 0.64 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 280 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 14.8520 5.4110 -3.7050 REMARK 3 T TENSOR REMARK 3 T11: 0.2873 T22: 0.1087 REMARK 3 T33: 0.0919 T12: -0.0153 REMARK 3 T13: 0.0045 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 19.8506 L22: 7.0378 REMARK 3 L33: 0.4897 L12: -5.8403 REMARK 3 L13: 2.8217 L23: -0.1713 REMARK 3 S TENSOR REMARK 3 S11: 0.0761 S12: 0.3170 S13: 0.4118 REMARK 3 S21: -0.0214 S22: -0.0886 S23: -0.3482 REMARK 3 S31: -0.0147 S32: 0.0598 S33: 0.0125 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 290 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8250 11.5320 -8.7840 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.0537 REMARK 3 T33: 0.0981 T12: 0.0297 REMARK 3 T13: -0.0130 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.2694 L22: 1.3733 REMARK 3 L33: 2.2526 L12: 0.1453 REMARK 3 L13: -0.1328 L23: 0.5797 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: -0.1149 S13: 0.0775 REMARK 3 S21: 0.0102 S22: -0.0099 S23: -0.0495 REMARK 3 S31: -0.2513 S32: 0.0409 S33: -0.0185 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 314 A 329 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8710 14.8630 -11.8440 REMARK 3 T TENSOR REMARK 3 T11: 0.2532 T22: 0.1168 REMARK 3 T33: 0.2454 T12: 0.1342 REMARK 3 T13: 0.1163 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 27.2227 L22: 8.7304 REMARK 3 L33: 7.7055 L12: -5.2051 REMARK 3 L13: 2.5237 L23: -2.4679 REMARK 3 S TENSOR REMARK 3 S11: 1.5736 S12: 0.8043 S13: 0.1201 REMARK 3 S21: -0.3006 S22: -0.4549 S23: 0.4602 REMARK 3 S31: -0.4970 S32: -0.4425 S33: -1.1186 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 278 B 283 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4880 -3.9370 -15.0630 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.0818 REMARK 3 T33: 0.1911 T12: 0.0868 REMARK 3 T13: -0.0267 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 10.5928 L22: 6.6111 REMARK 3 L33: 6.7575 L12: -5.8534 REMARK 3 L13: -1.2532 L23: -4.0231 REMARK 3 S TENSOR REMARK 3 S11: -0.2346 S12: -0.0581 S13: -0.4234 REMARK 3 S21: 0.1960 S22: -0.1986 S23: -0.0288 REMARK 3 S31: -0.0265 S32: 0.3654 S33: 0.4332 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 284 B 307 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0040 0.3710 -15.8830 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.0980 REMARK 3 T33: 0.1185 T12: 0.0416 REMARK 3 T13: -0.0032 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.4478 L22: 2.9635 REMARK 3 L33: 0.9559 L12: -0.6738 REMARK 3 L13: -0.4801 L23: -1.1973 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: 0.2723 S13: -0.1199 REMARK 3 S21: -0.1072 S22: -0.1079 S23: 0.1033 REMARK 3 S31: 0.0470 S32: -0.1247 S33: 0.0242 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 308 B 329 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2240 0.1180 -7.1850 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1129 REMARK 3 T33: 0.1205 T12: 0.0121 REMARK 3 T13: 0.0156 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.6219 L22: 2.9737 REMARK 3 L33: 2.6762 L12: -3.0743 REMARK 3 L13: 1.5762 L23: -1.4991 REMARK 3 S TENSOR REMARK 3 S11: -0.0687 S12: 0.0258 S13: -0.0725 REMARK 3 S21: 0.1481 S22: -0.0565 S23: 0.1418 REMARK 3 S31: 0.0981 S32: -0.3564 S33: 0.1253 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 281 C 306 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0910 10.9400 -36.2420 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.2817 REMARK 3 T33: 0.0425 T12: -0.0091 REMARK 3 T13: -0.0206 T23: -0.0171 REMARK 3 L TENSOR REMARK 3 L11: 1.7834 L22: 4.0780 REMARK 3 L33: 1.5101 L12: -0.5647 REMARK 3 L13: -0.4919 L23: -1.4799 REMARK 3 S TENSOR REMARK 3 S11: -0.0717 S12: 0.3763 S13: -0.0989 REMARK 3 S21: -0.2050 S22: 0.0241 S23: 0.0292 REMARK 3 S31: -0.0101 S32: -0.1887 S33: 0.0477 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 307 C 322 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0520 7.2390 -26.0600 REMARK 3 T TENSOR REMARK 3 T11: 0.0989 T22: 0.1877 REMARK 3 T33: 0.0585 T12: -0.0012 REMARK 3 T13: 0.0094 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 2.0273 L22: 10.6406 REMARK 3 L33: 1.9222 L12: -3.5786 REMARK 3 L13: -0.2305 L23: -1.7486 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: 0.0932 S13: -0.1132 REMARK 3 S21: 0.2846 S22: -0.0501 S23: 0.1271 REMARK 3 S31: -0.0262 S32: 0.0896 S33: 0.0277 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 323 C 328 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3290 19.9420 -29.0460 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.3686 REMARK 3 T33: 0.2015 T12: 0.0922 REMARK 3 T13: 0.0066 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 18.2606 L22: 30.4397 REMARK 3 L33: 2.7125 L12: -3.9765 REMARK 3 L13: 4.3928 L23: 5.9858 REMARK 3 S TENSOR REMARK 3 S11: -0.3061 S12: -0.0744 S13: 0.2182 REMARK 3 S21: 0.7471 S22: -0.2332 S23: 2.1699 REMARK 3 S31: 0.1034 S32: -0.0757 S33: 0.5393 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 278 D 285 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5980 4.5900 -23.4780 REMARK 3 T TENSOR REMARK 3 T11: 0.0513 T22: 0.2280 REMARK 3 T33: 0.1259 T12: 0.0297 REMARK 3 T13: 0.0428 T23: -0.0587 REMARK 3 L TENSOR REMARK 3 L11: 11.8701 L22: 16.3699 REMARK 3 L33: 3.3756 L12: 0.3356 REMARK 3 L13: 6.0575 L23: -1.9390 REMARK 3 S TENSOR REMARK 3 S11: 0.1683 S12: 0.5492 S13: -0.6223 REMARK 3 S21: -0.1266 S22: 0.0674 S23: -0.4816 REMARK 3 S31: 0.1065 S32: 0.2780 S33: -0.2356 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 286 D 322 REMARK 3 ORIGIN FOR THE GROUP (A): 19.4150 16.2510 -28.0900 REMARK 3 T TENSOR REMARK 3 T11: 0.0693 T22: 0.2580 REMARK 3 T33: 0.0771 T12: -0.0025 REMARK 3 T13: -0.0130 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 3.0573 L22: 3.5273 REMARK 3 L33: 0.4042 L12: -0.8433 REMARK 3 L13: -0.9575 L23: 0.3479 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: 0.0201 S13: 0.1007 REMARK 3 S21: 0.1129 S22: -0.0635 S23: -0.1320 REMARK 3 S31: -0.0196 S32: 0.0249 S33: 0.0476 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 323 D 330 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7210 28.1230 -31.3350 REMARK 3 T TENSOR REMARK 3 T11: 0.0919 T22: 0.3321 REMARK 3 T33: 0.0321 T12: 0.0231 REMARK 3 T13: -0.0062 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 22.5584 L22: 22.8540 REMARK 3 L33: 4.8307 L12: 2.6139 REMARK 3 L13: 7.0251 L23: -6.8848 REMARK 3 S TENSOR REMARK 3 S11: -0.5848 S12: 0.2800 S13: 0.5850 REMARK 3 S21: 0.0039 S22: 0.4796 S23: 0.2468 REMARK 3 S31: -0.1975 S32: -0.0529 S33: 0.1051 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2Y0Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-DEC-10. REMARK 100 THE PDBE ID CODE IS EBI-46595. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (MX-225) REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.00 REMARK 200 RESOLUTION RANGE LOW (A) : 2.05 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.1 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.7 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.30 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.6 REMARK 200 R MERGE FOR SHELL (I) : 0.49 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.09500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.72500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.09500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.72500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.43000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.09500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 27.72500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.43000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.09500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 27.72500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ALA 291 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ALA 291 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN C, ALA 291 TO CYS REMARK 400 ENGINEERED RESIDUE IN CHAIN D, ALA 291 TO CYS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 278 REMARK 465 THR A 279 REMARK 465 MET A 330 REMARK 465 GLU A 331 REMARK 465 MET B 330 REMARK 465 GLU B 331 REMARK 465 SER C 278 REMARK 465 THR C 279 REMARK 465 ILE C 280 REMARK 465 ALA C 329 REMARK 465 MET C 330 REMARK 465 GLU C 331 REMARK 465 GLU D 331 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 VAL C 328 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 292 O HOH A 2004 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 305 4.18 80.04 REMARK 500 ILE B 280 -59.87 -124.17 REMARK 500 ASP B 310 -161.82 -114.10 REMARK 500 LYS B 327 3.87 -55.86 REMARK 500 ASP C 310 -166.05 -100.41 REMARK 500 THR D 279 57.04 -102.23 REMARK 500 ASP D 310 -169.82 -104.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR D 279 ILE D 280 147.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y20 RELATED DB: PDB REMARK 900 THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN REMARK 900 TRANSMEMBRANE RECEPTORS - THE A291I MUTANT REMARK 900 RELATED ID: 2Y21 RELATED DB: PDB REMARK 900 THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN REMARK 900 TRANSMEMBRANE RECEPTORS - THE A291V MUTANT REMARK 900 RELATED ID: 2Y0T RELATED DB: PDB REMARK 900 THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN REMARK 900 TRANSMEMBRANE RECEPTORS - THE A291F MUTANT DBREF 2Y0Q A 278 331 UNP O28769 O28769_ARCFU 278 331 DBREF 2Y0Q B 278 331 UNP O28769 O28769_ARCFU 278 331 DBREF 2Y0Q C 278 331 UNP O28769 O28769_ARCFU 278 331 DBREF 2Y0Q D 278 331 UNP O28769 O28769_ARCFU 278 331 SEQADV 2Y0Q CYS A 291 UNP O28769 ALA 291 ENGINEERED MUTATION SEQADV 2Y0Q CYS B 291 UNP O28769 ALA 291 ENGINEERED MUTATION SEQADV 2Y0Q CYS C 291 UNP O28769 ALA 291 ENGINEERED MUTATION SEQADV 2Y0Q CYS D 291 UNP O28769 ALA 291 ENGINEERED MUTATION SEQRES 1 A 54 SER THR ILE THR ARG PRO ILE ILE GLU LEU SER ASN THR SEQRES 2 A 54 CYS ASP LYS ILE ALA GLU GLY ASN LEU GLU ALA GLU VAL SEQRES 3 A 54 PRO HIS GLN ASN ARG ALA ASP GLU ILE GLY ILE LEU ALA SEQRES 4 A 54 LYS SER ILE GLU ARG LEU ARG ARG SER LEU LYS VAL ALA SEQRES 5 A 54 MET GLU SEQRES 1 B 54 SER THR ILE THR ARG PRO ILE ILE GLU LEU SER ASN THR SEQRES 2 B 54 CYS ASP LYS ILE ALA GLU GLY ASN LEU GLU ALA GLU VAL SEQRES 3 B 54 PRO HIS GLN ASN ARG ALA ASP GLU ILE GLY ILE LEU ALA SEQRES 4 B 54 LYS SER ILE GLU ARG LEU ARG ARG SER LEU LYS VAL ALA SEQRES 5 B 54 MET GLU SEQRES 1 C 54 SER THR ILE THR ARG PRO ILE ILE GLU LEU SER ASN THR SEQRES 2 C 54 CYS ASP LYS ILE ALA GLU GLY ASN LEU GLU ALA GLU VAL SEQRES 3 C 54 PRO HIS GLN ASN ARG ALA ASP GLU ILE GLY ILE LEU ALA SEQRES 4 C 54 LYS SER ILE GLU ARG LEU ARG ARG SER LEU LYS VAL ALA SEQRES 5 C 54 MET GLU SEQRES 1 D 54 SER THR ILE THR ARG PRO ILE ILE GLU LEU SER ASN THR SEQRES 2 D 54 CYS ASP LYS ILE ALA GLU GLY ASN LEU GLU ALA GLU VAL SEQRES 3 D 54 PRO HIS GLN ASN ARG ALA ASP GLU ILE GLY ILE LEU ALA SEQRES 4 D 54 LYS SER ILE GLU ARG LEU ARG ARG SER LEU LYS VAL ALA SEQRES 5 D 54 MET GLU FORMUL 5 HOH *125(H2 O) HELIX 1 1 ILE A 280 GLU A 296 1 17 HELIX 2 2 ASP A 310 ALA A 329 1 20 HELIX 3 3 ILE B 280 GLU B 296 1 17 HELIX 4 4 ASP B 310 LYS B 327 1 18 HELIX 5 5 THR C 281 GLY C 297 1 17 HELIX 6 6 ASP C 310 LYS C 327 1 18 HELIX 7 7 ILE D 280 GLY D 297 1 18 HELIX 8 8 ASP D 310 MET D 330 1 21 CRYST1 40.190 55.450 158.860 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024882 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018034 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006295 0.00000