HEADER STRUCTURAL PROTEIN 13-DEC-10 2Y23 TITLE CRYSTAL STRUCTURE OF THE MYOMESIN DOMAINS MY9-MY11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOMESIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAINS MY9, MY10, MY11, RESIDUES 1141-1447; COMPND 5 SYNONYM: 190 KDA CONNECTIN-ASSOCIATED PROTEIN, 190 KDA TITIN- COMPND 6 ASSOCIATED PROTEIN, MYOMESIN FAMILY MEMBER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: MUSCLE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET151 KEYWDS STRUCTURAL PROTEIN, SARCOMERE, M-BAND, IMMUNOGLOBULIN- LIKE DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR N.PINOTSIS,S.D.CHATZIEFTHIMIOU,M.WILMANNS REVDAT 4 20-DEC-23 2Y23 1 REMARK REVDAT 3 17-JUL-19 2Y23 1 REMARK REVDAT 2 07-MAR-12 2Y23 1 JRNL REVDAT 1 21-DEC-11 2Y23 0 JRNL AUTH N.PINOTSIS,S.D.CHATZIEFTHIMIOU,F.BERKEMEIER,F.BEURON, JRNL AUTH 2 I.M.MAVRIDIS,P.V.KONAREV,D.I.SVERGUN,E.MORRIS,M.RIEF, JRNL AUTH 3 M.WILMANNS JRNL TITL SUPERHELICAL ARCHITECTURE OF THE MYOSIN FILAMENT-LINKING JRNL TITL 2 PROTEIN MYOMESIN WITH UNUSUAL ELASTIC PROPERTIES. JRNL REF PLOS BIOL. V. 10 1261 2012 JRNL REFN ISSN 1544-9173 JRNL PMID 22347812 JRNL DOI 10.1371/JOURNAL.PBIO.1001261 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1013 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.4920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2443 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 182 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.51000 REMARK 3 B22 (A**2) : -3.10000 REMARK 3 B33 (A**2) : 4.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.33000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.434 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.292 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.283 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2509 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3369 ; 1.577 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 7.198 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;38.532 ;25.702 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 483 ;21.517 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;25.588 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 371 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1848 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 899 ; 0.253 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1604 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 104 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 34 ; 0.233 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.191 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1560 ; 0.667 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2444 ; 1.071 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1082 ; 1.633 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 925 ; 2.621 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1141 A 1243 REMARK 3 ORIGIN FOR THE GROUP (A): 48.1272 -31.2777 32.6518 REMARK 3 T TENSOR REMARK 3 T11: -0.0786 T22: -0.0963 REMARK 3 T33: -0.0452 T12: 0.0223 REMARK 3 T13: -0.0274 T23: -0.0363 REMARK 3 L TENSOR REMARK 3 L11: 3.3184 L22: 5.5134 REMARK 3 L33: 1.9458 L12: -2.1412 REMARK 3 L13: -0.0752 L23: -0.3568 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: 0.0754 S13: -0.2717 REMARK 3 S21: -0.1460 S22: -0.1386 S23: 0.3435 REMARK 3 S31: 0.1095 S32: -0.1279 S33: 0.0298 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1244 A 1357 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2742 0.1065 22.7737 REMARK 3 T TENSOR REMARK 3 T11: -0.1253 T22: -0.0865 REMARK 3 T33: -0.1164 T12: -0.0119 REMARK 3 T13: -0.0059 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 3.3651 L22: 2.1791 REMARK 3 L33: 3.9228 L12: -0.9175 REMARK 3 L13: 0.1125 L23: -0.9416 REMARK 3 S TENSOR REMARK 3 S11: 0.0680 S12: 0.1382 S13: -0.2387 REMARK 3 S21: -0.0973 S22: 0.0494 S23: 0.2615 REMARK 3 S31: -0.0836 S32: 0.0973 S33: -0.1174 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1358 A 1447 REMARK 3 ORIGIN FOR THE GROUP (A): -19.1604 20.8727 -0.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.0924 T22: 0.2672 REMARK 3 T33: 0.0959 T12: 0.0303 REMARK 3 T13: 0.0207 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 3.7763 L22: 4.1814 REMARK 3 L33: 9.2892 L12: -3.1709 REMARK 3 L13: 2.9062 L23: -4.7603 REMARK 3 S TENSOR REMARK 3 S11: -0.1614 S12: -0.7780 S13: -0.0275 REMARK 3 S21: 0.5545 S22: 0.5069 S23: 0.3472 REMARK 3 S31: -0.4535 S32: -0.9719 S33: -0.3454 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2Y23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1290046695. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97699 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111), REMARK 200 HORIZONTALLY FOCUSSING REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15174 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: MYOMESIN DOMAINS MY10-MY11, PDB ENTRY 2R15 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.18M MAGNESIUM ACETATE 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.74350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1136 REMARK 465 ILE A 1137 REMARK 465 ASP A 1138 REMARK 465 PRO A 1139 REMARK 465 PHE A 1140 REMARK 465 ASP A 1405 REMARK 465 PHE A 1406 REMARK 465 LYS A 1407 REMARK 465 ASP A 1408 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1384 CD CE NZ REMARK 470 LYS A1403 CG CD CE NZ REMARK 470 LYS A1420 CD CE NZ REMARK 470 ASP A1445 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2141 O HOH A 2145 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A1341 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1180 -1.91 88.27 REMARK 500 ASP A1199 73.61 -174.12 REMARK 500 THR A1215 -130.43 -130.40 REMARK 500 LEU A1255 -156.15 -86.22 REMARK 500 LEU A1255 -150.73 -86.22 REMARK 500 LYS A1268 139.59 -175.45 REMARK 500 ASP A1322 -76.44 -107.88 REMARK 500 ASN A1382 46.79 71.85 REMARK 500 GLU A1402 -29.18 -158.56 REMARK 500 GLU A1417 74.74 49.22 REMARK 500 ASP A1432 -162.03 -177.96 REMARK 500 LYS A1438 137.36 -171.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2009 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A2016 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A2017 DISTANCE = 6.16 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG0 A 2451 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 2448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 2449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 2450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG0 A 2451 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y25 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MYOMESIN DOMAINS MY11-MY13 DBREF 2Y23 A 1141 1447 UNP P52179 MYOM1_HUMAN 1141 1447 SEQADV 2Y23 GLY A 1136 UNP P52179 EXPRESSION TAG SEQADV 2Y23 ILE A 1137 UNP P52179 EXPRESSION TAG SEQADV 2Y23 ASP A 1138 UNP P52179 EXPRESSION TAG SEQADV 2Y23 PRO A 1139 UNP P52179 EXPRESSION TAG SEQADV 2Y23 PHE A 1140 UNP P52179 EXPRESSION TAG SEQRES 1 A 312 GLY ILE ASP PRO PHE THR LYS GLU VAL VAL VAL ASN VAL SEQRES 2 A 312 ASP ASP ASP GLY VAL ILE SER LEU ASN PHE GLU CYS ASP SEQRES 3 A 312 LYS MET THR PRO LYS SER GLU PHE SER TRP SER LYS ASP SEQRES 4 A 312 TYR VAL SER THR GLU ASP SER PRO ARG LEU GLU VAL GLU SEQRES 5 A 312 SER LYS GLY ASN LYS THR LYS MET THR PHE LYS ASP LEU SEQRES 6 A 312 GLY MET ASP ASP LEU GLY ILE TYR SER CYS ASP VAL THR SEQRES 7 A 312 ASP THR ASP GLY ILE ALA SER SER TYR LEU ILE ASP GLU SEQRES 8 A 312 GLU GLU LEU LYS ARG LEU LEU ALA LEU SER HIS GLU HIS SEQRES 9 A 312 LYS PHE PRO THR VAL PRO VAL LYS SER GLU LEU ALA VAL SEQRES 10 A 312 GLU ILE LEU GLU LYS GLY GLN VAL ARG PHE TRP MET GLN SEQRES 11 A 312 ALA GLU LYS LEU SER GLY ASN ALA LYS VAL ASN TYR ILE SEQRES 12 A 312 PHE ASN GLU LYS GLU ILE PHE GLU GLY PRO LYS TYR LYS SEQRES 13 A 312 MET HIS ILE ASP ARG ASN THR GLY ILE ILE GLU MET PHE SEQRES 14 A 312 MET GLU LYS LEU GLN ASP GLU ASP GLU GLY THR TYR THR SEQRES 15 A 312 PHE GLN LEU GLN ASP GLY LYS ALA THR ASN HIS SER THR SEQRES 16 A 312 VAL VAL LEU VAL GLY ASP VAL PHE LYS LYS LEU GLN LYS SEQRES 17 A 312 GLU ALA GLU PHE GLN ARG GLN GLU TRP ILE ARG LYS GLN SEQRES 18 A 312 GLY PRO HIS PHE VAL GLU TYR LEU SER TRP GLU VAL THR SEQRES 19 A 312 GLY GLU CYS ASN VAL LEU LEU LYS CYS LYS VAL ALA ASN SEQRES 20 A 312 ILE LYS LYS GLU THR HIS ILE VAL TRP TYR LYS ASP GLU SEQRES 21 A 312 ARG GLU ILE SER VAL ASP GLU LYS HIS ASP PHE LYS ASP SEQRES 22 A 312 GLY ILE CYS THR LEU LEU ILE THR GLU PHE SER LYS LYS SEQRES 23 A 312 ASP ALA GLY ILE TYR GLU VAL ILE LEU LYS ASP ASP ARG SEQRES 24 A 312 GLY LYS ASP LYS SER ARG LEU LYS LEU VAL ASP GLU ALA HET BME A2448 4 HET BME A2449 4 HET BME A2450 4 HET PG0 A2451 5 HETNAM BME BETA-MERCAPTOETHANOL HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL HETSYN PG0 PEG 6000 FORMUL 2 BME 3(C2 H6 O S) FORMUL 5 PG0 C5 H12 O3 FORMUL 6 HOH *182(H2 O) HELIX 1 1 GLY A 1201 LEU A 1205 5 5 HELIX 2 2 ASP A 1225 PHE A 1241 1 17 HELIX 3 3 GLN A 1309 GLU A 1313 5 5 HELIX 4 4 GLY A 1335 GLY A 1357 1 23 HELIX 5 5 SER A 1419 ALA A 1423 5 5 SHEET 1 AA 4 VAL A1145 VAL A1148 0 SHEET 2 AA 4 ILE A1154 GLU A1159 -1 O SER A1155 N ASN A1147 SHEET 3 AA 4 LYS A1192 PHE A1197 -1 O THR A1193 N PHE A1158 SHEET 4 AA 4 LEU A1184 LYS A1189 -1 O GLU A1185 N THR A1196 SHEET 1 AB 4 VAL A1176 SER A1177 0 SHEET 2 AB 4 PHE A1169 LYS A1173 -1 O LYS A1173 N VAL A1176 SHEET 3 AB 4 GLY A1206 VAL A1212 -1 O SER A1209 N SER A1172 SHEET 4 AB 4 SER A1220 ILE A1224 -1 O SER A1220 N CYS A1210 SHEET 1 AC 4 VAL A1246 ILE A1254 0 SHEET 2 AC 4 VAL A1260 ALA A1266 -1 O ARG A1261 N GLU A1253 SHEET 3 AC 4 ILE A1300 MET A1305 -1 O ILE A1301 N MET A1264 SHEET 4 AC 4 LYS A1291 ASP A1295 -1 O LYS A1291 N PHE A1304 SHEET 1 AD 4 LYS A1282 ILE A1284 0 SHEET 2 AD 4 LYS A1274 PHE A1279 -1 O TYR A1277 N ILE A1284 SHEET 3 AD 4 GLY A1314 GLN A1321 -1 O THR A1317 N ILE A1278 SHEET 4 AD 4 THR A1326 LEU A1333 -1 O ASN A1327 N LEU A1320 SHEET 1 AE 3 HIS A1359 THR A1369 0 SHEET 2 AE 3 ASN A1373 ALA A1381 -1 O ASN A1373 N THR A1369 SHEET 3 AE 3 ILE A1410 ILE A1415 -1 O CYS A1411 N CYS A1378 SHEET 1 AF 4 ARG A1396 ASP A1401 0 SHEET 2 AF 4 HIS A1388 LYS A1393 -1 O ILE A1389 N ASP A1401 SHEET 3 AF 4 GLY A1424 LYS A1431 -1 O GLU A1427 N TYR A1392 SHEET 4 AF 4 ASP A1437 LEU A1443 -1 O ASP A1437 N LEU A1430 SITE 1 AC1 5 CYS A1160 LYS A1162 THR A1215 ASP A1216 SITE 2 AC1 5 ILE A1218 SITE 1 AC2 4 ASP A1225 GLU A1226 GLU A1227 HOH A2074 SITE 1 AC3 7 TYR A1175 LYS A1289 MET A1305 GLU A1306 SITE 2 AC3 7 LYS A1307 ASP A1312 HOH A2116 SITE 1 AC4 7 TYR A1175 VAL A1176 SER A1177 PRO A1288 SITE 2 AC4 7 LYS A1289 HOH A2181 HOH A2182 CRYST1 61.471 41.487 84.862 90.00 88.39 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016268 0.000000 -0.000457 0.00000 SCALE2 0.000000 0.024104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011788 0.00000