HEADER STRUCTURAL PROTEIN 27-DEC-10 2Y3V TITLE N-TERMINAL HEAD DOMAIN OF DANIO RERIO SAS-6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: HEAD DOMAIN, RESIDUES 1-156; COMPND 5 SYNONYM: SAS6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 DERIVATIVE; SOURCE 10 OTHER_DETAILS: CDNA FROM ZEBRAFISH KEYWDS STRUCTURAL PROTEIN, CYTOSKELETON, BASAL BODY, CENTRIOLE, CARTWHEEL, KEYWDS 2 CARTWHEEL HUB EXPDTA X-RAY DIFFRACTION AUTHOR M.VAN BREUGEL REVDAT 4 01-MAY-24 2Y3V 1 REMARK REVDAT 3 17-JAN-18 2Y3V 1 JRNL REVDAT 2 16-MAR-11 2Y3V 1 JRNL REVDAT 1 09-FEB-11 2Y3V 0 JRNL AUTH M.VAN BREUGEL,M.HIRONO,A.ANDREEVA,H.A.YANAGISAWA, JRNL AUTH 2 S.YAMAGUCHI,Y.NAKAZAWA,N.MORGNER,M.PETROVICH,I.O.EBONG, JRNL AUTH 3 C.V.ROBINSON,C.M.JOHNSON,D.VEPRINTSEV,B.ZUBER JRNL TITL STRUCTURES OF SAS-6 SUGGEST ITS ORGANIZATION IN CENTRIOLES. JRNL REF SCIENCE V. 331 1196 2011 JRNL REFN ESSN 1095-9203 JRNL PMID 21273447 JRNL DOI 10.1126/SCIENCE.1199325 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 63668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.8213 - 5.4473 0.98 2777 166 0.2313 0.2292 REMARK 3 2 5.4473 - 4.3242 1.00 2717 151 0.1871 0.1957 REMARK 3 3 4.3242 - 3.7777 1.00 2723 122 0.1911 0.1947 REMARK 3 4 3.7777 - 3.4324 1.00 2672 145 0.2093 0.2369 REMARK 3 5 3.4324 - 3.1864 1.00 2668 131 0.2166 0.2356 REMARK 3 6 3.1864 - 2.9986 1.00 2641 154 0.2219 0.2482 REMARK 3 7 2.9986 - 2.8484 1.00 2636 156 0.2274 0.2766 REMARK 3 8 2.8484 - 2.7244 1.00 2633 148 0.2350 0.2479 REMARK 3 9 2.7244 - 2.6195 1.00 2624 154 0.2476 0.2651 REMARK 3 10 2.6195 - 2.5291 1.00 2596 147 0.2475 0.2948 REMARK 3 11 2.5291 - 2.4501 0.99 2653 123 0.2477 0.2804 REMARK 3 12 2.4501 - 2.3800 0.99 2591 138 0.2469 0.2624 REMARK 3 13 2.3800 - 2.3174 1.00 2630 126 0.2317 0.2550 REMARK 3 14 2.3174 - 2.2608 0.99 2620 154 0.2354 0.2520 REMARK 3 15 2.2608 - 2.2094 0.99 2617 143 0.2372 0.2617 REMARK 3 16 2.2094 - 2.1624 0.99 2554 130 0.2415 0.3212 REMARK 3 17 2.1624 - 2.1192 0.99 2644 118 0.2497 0.3027 REMARK 3 18 2.1192 - 2.0792 0.99 2572 148 0.2710 0.3029 REMARK 3 19 2.0792 - 2.0420 0.99 2587 143 0.2775 0.3355 REMARK 3 20 2.0420 - 2.0074 0.99 2595 132 0.2789 0.2979 REMARK 3 21 2.0074 - 1.9750 0.99 2585 130 0.3020 0.3263 REMARK 3 22 1.9750 - 1.9446 0.99 2595 139 0.3281 0.3493 REMARK 3 23 1.9446 - 1.9160 0.97 2500 140 0.3465 0.4087 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 40.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01190 REMARK 3 B22 (A**2) : 15.80910 REMARK 3 B33 (A**2) : -6.92770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5125 REMARK 3 ANGLE : 0.663 6938 REMARK 3 CHIRALITY : 0.045 822 REMARK 3 PLANARITY : 0.002 886 REMARK 3 DIHEDRAL : 11.596 1966 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES A-2, C-2, AND C145 TO C156, D REMARK 3 -2 TO D0, AND D155-D156, ARE DISORDERED. LOOP REGION C112 TO REMARK 3 C120 SHOWED POOR ELECTRON DENSITY. REMARK 4 REMARK 4 2Y3V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1290046762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED CHANNEL REMARK 200 -CUT SILICON MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63745 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 54.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.90 REMARK 200 R MERGE FOR SHELL (I) : 1.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: SE-MET DERIVATIVE REMARK 200 REMARK 200 REMARK: THE SELENOMETHIONINE DERIVATIVE STRUCTURE WAS SOLVED BY REMARK 200 MAD USING A DERIVATIVE OF A L57M,L90M MUTANT. AN INITIAL MODEL REMARK 200 WAS BUILT USING THE EXPERIMENTAL ELECTRON DENSITY MAP AND THEN REMARK 200 USED FOR MOLECULAR REPLACEMENT AGAINST THE NATIVE DATASET. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 25% PEG 3350. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.49500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.53000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.63500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.53000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.49500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.63500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY C -2 REMARK 465 SER C 145 REMARK 465 ASP C 146 REMARK 465 THR C 147 REMARK 465 ASP C 148 REMARK 465 ILE C 149 REMARK 465 LYS C 150 REMARK 465 LYS C 151 REMARK 465 TYR C 152 REMARK 465 LEU C 153 REMARK 465 ALA C 154 REMARK 465 SER C 155 REMARK 465 CYS C 156 REMARK 465 GLY D -2 REMARK 465 PRO D -1 REMARK 465 HIS D 0 REMARK 465 SER D 155 REMARK 465 CYS D 156 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2014 O HOH B 2031 2.02 REMARK 500 O HOH C 2016 O HOH D 2088 2.06 REMARK 500 O HOH A 2041 O HOH A 2109 2.08 REMARK 500 N LYS B 132 O HOH B 2095 2.15 REMARK 500 O HOH C 2087 O HOH C 2088 2.15 REMARK 500 O HOH B 2015 O HOH B 2036 2.17 REMARK 500 O HOH B 2058 O HOH B 2067 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2072 O HOH D 2073 4445 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 132 135.91 -175.60 REMARK 500 ASN B 7 86.97 -154.82 REMARK 500 THR B 128 62.27 -101.72 REMARK 500 LYS B 132 124.26 -176.38 REMARK 500 LYS C 132 119.33 -175.33 REMARK 500 ASP D 117 95.46 -165.80 REMARK 500 HIS D 118 72.91 46.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2037 DISTANCE = 6.00 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "CA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "DA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y3W RELATED DB: PDB REMARK 900 N-TERMINAL HEAD DOMAIN AND BEGINNING OF COILED COIL DOMAIN OF DANIO REMARK 900 RERIO SAS-6 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE N-TERMINAL THREE RESIDUES (GPH) STEM FROM THE REMARK 999 EXPRESSION VECTOR. THE S102N MUTATION PROBABLY STEMS FROM REMARK 999 STRAIN VARIATION. IT WAS FOUND IN ALL INDEPENDENT PCR REMARK 999 REACTIONS MADE WITH THE CDNA. S102 IS NON-CONSERVED REMARK 999 EVOLUTIONARILY AND STRUCTURALLY IS SITUATED IN A LOOP REGION. DBREF 2Y3V A 1 156 UNP Q7ZVT3 SAS6_DANRE 1 156 DBREF 2Y3V B 1 156 UNP Q7ZVT3 SAS6_DANRE 1 156 DBREF 2Y3V C 1 156 UNP Q7ZVT3 SAS6_DANRE 1 156 DBREF 2Y3V D 1 156 UNP Q7ZVT3 SAS6_DANRE 1 156 SEQADV 2Y3V GLY A -2 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V PRO A -1 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V HIS A 0 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V ASN A 102 UNP Q7ZVT3 SER 102 SEE REMARK 999 SEQADV 2Y3V GLY B -2 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V PRO B -1 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V HIS B 0 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V ASN B 102 UNP Q7ZVT3 SER 102 SEE REMARK 999 SEQADV 2Y3V GLY C -2 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V PRO C -1 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V HIS C 0 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V ASN C 102 UNP Q7ZVT3 SER 102 SEE REMARK 999 SEQADV 2Y3V GLY D -2 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V PRO D -1 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V HIS D 0 UNP Q7ZVT3 EXPRESSION TAG SEQADV 2Y3V ASN D 102 UNP Q7ZVT3 SER 102 SEE REMARK 999 SEQRES 1 A 159 GLY PRO HIS MET THR GLU LEU LEU PHE ASN LYS ARG LEU SEQRES 2 A 159 GLN VAL LEU VAL LYS SER LYS ASP THR ASP GLU ARG ARG SEQRES 3 A 159 SER VAL ILE ARG VAL SER ILE GLU LEU GLN LEU PRO SER SEQRES 4 A 159 SER PRO VAL HIS ARG LYS ASP LEU VAL VAL ARG LEU THR SEQRES 5 A 159 ASP ASP THR ASP LEU TYR PHE LEU TYR ASN LEU ILE ILE SEQRES 6 A 159 SER GLU GLU ASP PHE GLN SER LEU LYS VAL GLN GLN GLY SEQRES 7 A 159 LEU LEU ILE ASP PHE THR SER PHE PRO GLN LYS PHE ILE SEQRES 8 A 159 ASP LEU LEU GLU GLN CYS ILE CYS GLU GLN ASP LYS GLU SEQRES 9 A 159 ASN PRO ARG PHE LEU LEU GLN LEU SER SER SER SER SER SEQRES 10 A 159 ALA PHE ASP HIS SER PRO SER ASN LEU ASN ILE VAL GLU SEQRES 11 A 159 THR ASN ALA PHE LYS HIS LEU THR HIS LEU SER LEU LYS SEQRES 12 A 159 LEU LEU PRO GLY SER ASP THR ASP ILE LYS LYS TYR LEU SEQRES 13 A 159 ALA SER CYS SEQRES 1 B 159 GLY PRO HIS MET THR GLU LEU LEU PHE ASN LYS ARG LEU SEQRES 2 B 159 GLN VAL LEU VAL LYS SER LYS ASP THR ASP GLU ARG ARG SEQRES 3 B 159 SER VAL ILE ARG VAL SER ILE GLU LEU GLN LEU PRO SER SEQRES 4 B 159 SER PRO VAL HIS ARG LYS ASP LEU VAL VAL ARG LEU THR SEQRES 5 B 159 ASP ASP THR ASP LEU TYR PHE LEU TYR ASN LEU ILE ILE SEQRES 6 B 159 SER GLU GLU ASP PHE GLN SER LEU LYS VAL GLN GLN GLY SEQRES 7 B 159 LEU LEU ILE ASP PHE THR SER PHE PRO GLN LYS PHE ILE SEQRES 8 B 159 ASP LEU LEU GLU GLN CYS ILE CYS GLU GLN ASP LYS GLU SEQRES 9 B 159 ASN PRO ARG PHE LEU LEU GLN LEU SER SER SER SER SER SEQRES 10 B 159 ALA PHE ASP HIS SER PRO SER ASN LEU ASN ILE VAL GLU SEQRES 11 B 159 THR ASN ALA PHE LYS HIS LEU THR HIS LEU SER LEU LYS SEQRES 12 B 159 LEU LEU PRO GLY SER ASP THR ASP ILE LYS LYS TYR LEU SEQRES 13 B 159 ALA SER CYS SEQRES 1 C 159 GLY PRO HIS MET THR GLU LEU LEU PHE ASN LYS ARG LEU SEQRES 2 C 159 GLN VAL LEU VAL LYS SER LYS ASP THR ASP GLU ARG ARG SEQRES 3 C 159 SER VAL ILE ARG VAL SER ILE GLU LEU GLN LEU PRO SER SEQRES 4 C 159 SER PRO VAL HIS ARG LYS ASP LEU VAL VAL ARG LEU THR SEQRES 5 C 159 ASP ASP THR ASP LEU TYR PHE LEU TYR ASN LEU ILE ILE SEQRES 6 C 159 SER GLU GLU ASP PHE GLN SER LEU LYS VAL GLN GLN GLY SEQRES 7 C 159 LEU LEU ILE ASP PHE THR SER PHE PRO GLN LYS PHE ILE SEQRES 8 C 159 ASP LEU LEU GLU GLN CYS ILE CYS GLU GLN ASP LYS GLU SEQRES 9 C 159 ASN PRO ARG PHE LEU LEU GLN LEU SER SER SER SER SER SEQRES 10 C 159 ALA PHE ASP HIS SER PRO SER ASN LEU ASN ILE VAL GLU SEQRES 11 C 159 THR ASN ALA PHE LYS HIS LEU THR HIS LEU SER LEU LYS SEQRES 12 C 159 LEU LEU PRO GLY SER ASP THR ASP ILE LYS LYS TYR LEU SEQRES 13 C 159 ALA SER CYS SEQRES 1 D 159 GLY PRO HIS MET THR GLU LEU LEU PHE ASN LYS ARG LEU SEQRES 2 D 159 GLN VAL LEU VAL LYS SER LYS ASP THR ASP GLU ARG ARG SEQRES 3 D 159 SER VAL ILE ARG VAL SER ILE GLU LEU GLN LEU PRO SER SEQRES 4 D 159 SER PRO VAL HIS ARG LYS ASP LEU VAL VAL ARG LEU THR SEQRES 5 D 159 ASP ASP THR ASP LEU TYR PHE LEU TYR ASN LEU ILE ILE SEQRES 6 D 159 SER GLU GLU ASP PHE GLN SER LEU LYS VAL GLN GLN GLY SEQRES 7 D 159 LEU LEU ILE ASP PHE THR SER PHE PRO GLN LYS PHE ILE SEQRES 8 D 159 ASP LEU LEU GLU GLN CYS ILE CYS GLU GLN ASP LYS GLU SEQRES 9 D 159 ASN PRO ARG PHE LEU LEU GLN LEU SER SER SER SER SER SEQRES 10 D 159 ALA PHE ASP HIS SER PRO SER ASN LEU ASN ILE VAL GLU SEQRES 11 D 159 THR ASN ALA PHE LYS HIS LEU THR HIS LEU SER LEU LYS SEQRES 12 D 159 LEU LEU PRO GLY SER ASP THR ASP ILE LYS LYS TYR LEU SEQRES 13 D 159 ALA SER CYS FORMUL 5 HOH *399(H2 O) HELIX 1 1 SER A 63 GLY A 75 1 13 HELIX 2 2 ASP A 79 THR A 81 5 3 HELIX 3 3 SER A 82 GLN A 98 1 17 HELIX 4 4 SER A 145 ALA A 154 1 10 HELIX 5 5 SER B 63 GLY B 75 1 13 HELIX 6 6 SER B 82 GLN B 98 1 17 HELIX 7 7 SER B 145 ALA B 154 1 10 HELIX 8 8 SER C 63 GLY C 75 1 13 HELIX 9 9 SER C 82 GLN C 98 1 17 HELIX 10 10 SER D 63 GLY D 75 1 13 HELIX 11 11 SER D 82 GLN D 98 1 17 HELIX 12 12 SER D 145 LEU D 153 1 9 SHEET 1 AA 8 THR A 2 LYS A 15 0 SHEET 2 AA 8 ARG A 22 GLN A 33 -1 O ARG A 22 N VAL A 14 SHEET 3 AA 8 ASP A 43 ASP A 50 -1 O ASP A 43 N GLN A 33 SHEET 4 AA 8 ASP A 53 ILE A 62 -1 N ASP A 53 O ASP A 50 SHEET 5 AA 8 LEU A 134 PRO A 143 -1 O LEU A 142 N ASN A 59 SHEET 6 AA 8 SER A 121 GLU A 127 -1 O SER A 121 N LEU A 141 SHEET 7 AA 8 PHE A 105 SER A 110 -1 O LEU A 106 N VAL A 126 SHEET 8 AA 8 THR A 2 LYS A 15 1 O GLN A 11 N LEU A 107 SHEET 1 BA 8 THR B 2 LYS B 15 0 SHEET 2 BA 8 ARG B 22 GLN B 33 -1 O ARG B 22 N VAL B 14 SHEET 3 BA 8 ASP B 43 ASP B 50 -1 O ASP B 43 N GLN B 33 SHEET 4 BA 8 ASP B 53 ILE B 62 -1 N ASP B 53 O ASP B 50 SHEET 5 BA 8 LEU B 134 PRO B 143 -1 O LEU B 142 N ASN B 59 SHEET 6 BA 8 SER B 121 GLU B 127 -1 O SER B 121 N LEU B 141 SHEET 7 BA 8 PHE B 105 SER B 110 -1 O LEU B 106 N VAL B 126 SHEET 8 BA 8 THR B 2 LYS B 15 1 O LEU B 13 N LEU B 109 SHEET 1 CA 8 HIS C 0 LYS C 15 0 SHEET 2 CA 8 ARG C 22 PRO C 35 -1 O ARG C 22 N VAL C 14 SHEET 3 CA 8 ASP C 43 ASP C 50 -1 O ASP C 43 N GLN C 33 SHEET 4 CA 8 ASP C 53 ILE C 62 -1 N ASP C 53 O ASP C 50 SHEET 5 CA 8 LEU C 134 PRO C 143 -1 O LEU C 142 N ASN C 59 SHEET 6 CA 8 SER C 121 GLU C 127 -1 O SER C 121 N LEU C 141 SHEET 7 CA 8 PHE C 105 SER C 110 -1 O LEU C 106 N VAL C 126 SHEET 8 CA 8 HIS C 0 LYS C 15 1 O LEU C 13 N LEU C 109 SHEET 1 DA 8 GLU D 3 LYS D 15 0 SHEET 2 DA 8 ARG D 22 GLN D 33 -1 O ARG D 22 N VAL D 14 SHEET 3 DA 8 ASP D 43 ASP D 50 -1 O ASP D 43 N GLN D 33 SHEET 4 DA 8 ASP D 53 ILE D 62 -1 N ASP D 53 O ASP D 50 SHEET 5 DA 8 LEU D 134 PRO D 143 -1 O LEU D 142 N ASN D 59 SHEET 6 DA 8 SER D 121 GLU D 127 -1 O SER D 121 N LEU D 141 SHEET 7 DA 8 PHE D 105 SER D 111 -1 O LEU D 106 N VAL D 126 SHEET 8 DA 8 GLU D 3 LYS D 15 1 O LEU D 13 N LEU D 109 CRYST1 66.990 95.270 129.060 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014928 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010496 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007748 0.00000 MTRIX1 1 0.977600 -0.210400 0.009823 -35.87000 1 MTRIX2 1 0.210100 0.977400 0.024890 -28.81000 1 MTRIX3 1 -0.014840 -0.022270 0.999600 5.33500 1 MTRIX1 2 0.839000 -0.541100 0.058270 7.51700 1 MTRIX2 2 0.544000 0.830600 -0.119400 -49.96000 1 MTRIX3 2 0.016200 0.131900 0.991100 -2.00800 1 MTRIX1 3 0.970500 0.234600 -0.056210 -2.41500 1 MTRIX2 3 0.240600 -0.957700 0.157800 -26.84000 1 MTRIX3 3 -0.016810 -0.166700 -0.985900 -3.51400 1